mRNA_M-pyrifera_M_contig68737.16527.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A024UDN4_9STRA (DNA topoisomerase I n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UDN4_9STRA) HSP 1 Score: 255 bits (651), Expect = 1.340e-76 Identity = 121/222 (54.50%), Postives = 161/222 (72.52%), Query Frame = 1
Query: 148 KVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYA-MCRGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
K+K +R++MA+KA++WW A+ELP+GI WRSLEHNGV+FPP Y PHG+P++YDG VTLTP QEE+A+++A M QL TA F NFF +FR LG +H I++ K +F RI A L+ +A+K R+KEEKA EKA K+++ +HGFAIVDG ++VGNF IEPPGLFRGRG+HPK G LK+ V PE+VT+N+ + +PPC PG AW +I
Sbjct: 106 KLKVQNKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPSYEPHGIPLIYDGVPVTLTPEQEEIASFFAAMPADGPQLGNPKTAAMFTKNFFADFRASLGKNHVIKDIKKCNFERIQAHLNEIRDAKKERTKEEKAPEKAKKDEELYRHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVMPEEVTINVGMEDRVPPCLTPGHAWKEVI 327
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A2P4XSG9_9STRA (DNA topoisomerase (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSG9_9STRA) HSP 1 Score: 243 bits (620), Expect = 2.190e-74 Identity = 116/222 (52.25%), Postives = 158/222 (71.17%), Query Frame = 1
Query: 148 KVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYAMC-RGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
K+K + +R++MA+KA +WW A+ELP+GI WR+LEHNGV+FP PY PH VP+LY+G+ + LTP+QEE+A++YA + QL TA FN NFF +F+KVLG H+++ F DFSRI +L+ + E +K +KEEK EK +E + +GFA VDG ++VGNF IEPPGLFRGRG+HPK G LK RV PEDVT+N+ +P C +PG AW ++I
Sbjct: 130 KLKVHSKGERLDMAIKAFRWWNAEELPEGIQWRTLEHNGVMFPLPYKPHHVPLLYNGKEIELTPSQEEIASFYAAIPKDGPQLGNPKTAKIFNKNFFTDFKKVLGKQHEVKTFDGCDFSRIATYLEKQREEKKNMTKEEKLPEKEKRELEVFTNGFAFVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVMPEDVTVNVGISDRVPICNVPGHAWKQVI 351
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: W4G034_9STRA (DNA topoisomerase I n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G034_9STRA) HSP 1 Score: 249 bits (635), Expect = 2.860e-74 Identity = 118/222 (53.15%), Postives = 159/222 (71.62%), Query Frame = 1
Query: 148 KVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYA-MCRGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
K+K + +R++MA+KA++WW A+ELP+GI WRSLEHNGV+FPP Y PHG+PVLYDG VTLTP QEE+A+++A M QL TA F NFF +F+ LG +H I++ K +F +I A L + +K R+KEEKA EK K+++ +HGFAI+DG ++VGNF IEPPGLFRGRG+HPK G LK+ V PE+VT+N+ + +PPC PG AW +I
Sbjct: 102 KLKVQSKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPSYEPHGIPVLYDGVPVTLTPEQEEIASFFAAMPADGPQLGNPKTAAMFTKNFFADFKASLGKNHVIKDIKKCNFEKIQAHLADLRDVKKDRTKEEKAPEKIKKDEELYRHGFAIIDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVLPEEVTINVGMEDRVPPCLTPGHAWKEVI 323
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A6G0WXZ6_9STRA (TOPEUc domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXZ6_9STRA) HSP 1 Score: 246 bits (629), Expect = 1.160e-73 Identity = 116/222 (52.25%), Postives = 155/222 (69.82%), Query Frame = 1
Query: 148 KVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYAMCR-GAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
K+K +R++MA+KA++WW A+ELP+GI WRSLEHNGV+FPP Y PHG+P+LYDG+ LTP QEE+A+++A QL TA F NFF +F+ LG +H I++ K DF +I L+ + RK R+KEEKA EKA K ++ HGFAIVDG ++VGNF IEPPGLFRGRG+HPK G LK+ V PE+VT+N+ + +P C +PG AW +I
Sbjct: 84 KLKVQNKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPTYVPHGIPLLYDGQPAELTPEQEEIASFFASIPLDGPQLGNPKTAAMFTKNFFADFKASLGKNHVIKDIKKCDFEKIRTHLNTLRDERKERTKEEKAPEKAKKNEELFHHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVMPEEVTINIGMEDRVPICTMPGHAWKEVI 305
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A485L6E4_9STRA (DNA topoisomerase I n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6E4_9STRA) HSP 1 Score: 247 bits (630), Expect = 1.410e-73 Identity = 117/222 (52.70%), Postives = 159/222 (71.62%), Query Frame = 1
Query: 148 KVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYA-MCRGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
K+K + +R++MA+K+++WW ADELP+GI WRSLEHNGV+FP Y PHGVP+LY+G+ V LTPAQEE+A+++A M QL TA F NFF +F+ LG H I++ K DF +I L+ + +K R+KEEKA EKA K+++ +HGFAIVDG ++VGNF IEPPGLFRGRG+HPK G LK+ VQP +VT+N+ + +P C +PG AW +I
Sbjct: 98 KLKVQSKSERLDMAIKSYRWWNADELPEGIQWRSLEHNGVLFPSVYEPHGVPLLYEGKPVDLTPAQEEIASFFAAMPLDGPQLGNPKTADMFTKNFFADFKSALGKGHAIKDIKKCDFEKIRTHLNELRDVKKERTKEEKAPEKAKKDEELFRHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVQPGEVTINVGMEDRVPQCLVPGHAWKEVI 319
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A0W8CYM1_PHYNI (DNA topoisomerase I n=11 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CYM1_PHYNI) HSP 1 Score: 246 bits (629), Expect = 4.400e-73 Identity = 118/222 (53.15%), Postives = 158/222 (71.17%), Query Frame = 1
Query: 148 KVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYAMC-RGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
K+K + +R++MA+KA +WW A+ELP+GI WR+LEHNGV+FPPPY PH VP+LY+G+ + LTP+QEE+A++YA + QL TA FN NFF +F+KVLG H+++ F DFSRI A L+ E +K +KEEK EK +E + +GFA VDG ++VGNF IEPPGLFRGRG+HPK G LK RV PEDVT+N+ +P C +PG AW ++I
Sbjct: 133 KLKVHSKSERLDMAIKAFRWWNAEELPEGIQWRTLEHNGVMFPPPYKPHHVPLLYNGKEIELTPSQEEVASFYAAIPKDGPQLGNPKTAKIFNKNFFTDFKKVLGKQHEVKTFEGCDFSRIAAHLEKLREEKKNMTKEEKLPEKEKREMEVFTNGFAFVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVMPEDVTVNVGISDRVPICNVPGHAWKQVI 354
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A5A8DLB6_CAFRO (TOPEUc domain-containing protein n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8DLB6_CAFRO) HSP 1 Score: 247 bits (631), Expect = 7.220e-73 Identity = 121/222 (54.50%), Postives = 152/222 (68.47%), Query Frame = 1
Query: 145 GKVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYAMCRGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
GKVK + +Q E A+KA KWWEA P GI W LEH GVV P Y PHGV VLY+G+ V LTP QEE AT++A C AQQL++ TA TF NFF ++R +LG H IQ K+DF+ I L+ + EAR A +KEEK KA KE LKHGFA+VDG +++GNF +EPP LFRGRG+HP+AG +K R+ PEDV +N DA +P CP+PG AW R++
Sbjct: 164 GKVKTLKPMQIAEAAMKAFKWWEAPARPAGIKWTELEHPGVVLAPEYEPHGVKVLYEGKPVDLTPPQEEAATFFAACHNAQQLQDPATAETFMKNFFADWRPILGPGHVIQRMDKVDFTPIVRHLELKREARLAMTKEEKDAIKAEKELLMLKHGFALVDGHIEKMGNFNLEPPSLFRGRGEHPRAGSIKSRLLPEDVQINCGYDAVVPACPLPGHAWSRVV 385
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A0P1ANU5_PLAHL (Dna topoisomerase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ANU5_PLAHL) HSP 1 Score: 244 bits (624), Expect = 2.020e-72 Identity = 119/224 (53.12%), Postives = 162/224 (72.32%), Query Frame = 1
Query: 148 KVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYAMC-RGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLN--LSEDAPIPPCPIPGRAWGRII 810
K+K + +R++MA+KA +WW A+ELP+GI WR+LEHNGV+FPPPY PH VP+LY+G+ + LTP+QEE+A++YA + QL TA FN NFF +F+KVLG H++++F + DFSRI L+ + +K +KEEK EK +E + +GFA VDG ++VGNF IEPPGLFRGRG+HPK G LK RV PEDVT+N +S+ API C +PG AW ++I
Sbjct: 124 KLKVHSKAERLDMAIKAFRWWNAEELPEGIQWRTLEHNGVMFPPPYKPHHVPLLYNGKEIELTPSQEEVASFYAAIPKDGPQLGNPKTAKIFNKNFFLDFKKVLGKQHEVKKFDECDFSRIATHLEKMRDEKKNMTKEEKLPEKEKREMEVFSNGFAFVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVLPEDVTVNVGISDRAPI--CNVPGHAWKQVI 345
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A662XU24_9STRA (DNA topoisomerase I n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XU24_9STRA) HSP 1 Score: 246 bits (627), Expect = 3.150e-72 Identity = 117/226 (51.77%), Postives = 161/226 (71.24%), Query Frame = 1
Query: 145 GKVKRMTV---VQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYAMCRG-AQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
G V+++ V +R++MA+KA++WW A+ELP+GI WR+LEHNGV+FPPPYAPH VP+LY+G+ + LTP QEELA++YA QL TA FN NFF +F+K+LG H+++ F DFSRI L+ + E +K+ +KEEK EK +E + +GFA+VDG ++VGNF IEPPGLFRGRG+HPK G LK RV P DVT+N+ +P C +PG +W ++I
Sbjct: 132 GSVRKLKVHSKSERLDMAIKAYRWWNAEELPEGIQWRTLEHNGVMFPPPYAPHHVPLLYNGQEIELTPVQEELASFYAAIPSDGPQLGNPKTAKIFNKNFFTDFKKLLGRQHEVKSFESCDFSRIAKHLEKQREEKKSMTKEEKQPEKERRETELFTNGFALVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVMPGDVTVNVGISDRVPICNVPGHSWKQVI 357
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A8K1C500_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C500_PYTOL) HSP 1 Score: 242 bits (618), Expect = 1.790e-71 Identity = 118/226 (52.21%), Postives = 161/226 (71.24%), Query Frame = 1
Query: 145 GKVKRMTV---VQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYAMC-RGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
G V+++ V +R++MA+KA++WW+A+ELP+GI WR+LEHNGV+FPP Y PH VP++Y+G+ + LTPAQEELA++YA + QL TA FN NFF +F+KVLG H+++ F + DFS I A L+ E +K+ +KEEK EK KE + +GFAIVDG ++VGNF IEPPGLFRGRG+HPK G LK RV P +VT+N+ +P C +PG AW +I
Sbjct: 137 GNVRKLKVHSKSERLDMAIKAYRWWKAEELPEGIQWRTLEHNGVMFPPAYVPHKVPLVYNGKQIELTPAQEELASFYAAIPKDGPQLGNPKTAKIFNKNFFTDFKKVLGRGHEVKTFEQCDFSLIAAHLEKLREEKKSMTKEEKQPEKERKELEQFTNGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVMPGEVTVNVGISDRVPICNVPGHAWKEVI 362 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68737.16527.1 >prot_M-pyrifera_M_contig68737.16527.1 ID=prot_M-pyrifera_M_contig68737.16527.1|Name=mRNA_M-pyrifera_M_contig68737.16527.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=270bp KRRRTSRAKSAGRKTAKGAKGKKAAPKKKAPAKKGGKKGASAKKSVARGKback to top mRNA from alignment at M-pyrifera_M_contig68737:2..811- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68737.16527.1 ID=mRNA_M-pyrifera_M_contig68737.16527.1|Name=mRNA_M-pyrifera_M_contig68737.16527.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig68737:2..811- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68737:2..811- >mRNA_M-pyrifera_M_contig68737.16527.1 ID=mRNA_M-pyrifera_M_contig68737.16527.1|Name=mRNA_M-pyrifera_M_contig68737.16527.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1620bp|location=Sequence derived from alignment at M-pyrifera_M_contig68737:2..811- (Macrocystis pyrifera P11B4 male)back to top |