mRNA_M-pyrifera_M_contig68737.16527.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig68737.16527.1
Unique NamemRNA_M-pyrifera_M_contig68737.16527.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A024UDN4_9STRA (DNA topoisomerase I n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UDN4_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.340e-76
Identity = 121/222 (54.50%), Postives = 161/222 (72.52%), Query Frame = 1
Query:  148 KVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYA-MCRGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
            K+K     +R++MA+KA++WW A+ELP+GI WRSLEHNGV+FPP Y PHG+P++YDG  VTLTP QEE+A+++A M     QL    TA  F  NFF +FR  LG +H I++  K +F RI A L+   +A+K R+KEEKA EKA K+++  +HGFAIVDG  ++VGNF IEPPGLFRGRG+HPK G LK+ V PE+VT+N+  +  +PPC  PG AW  +I
Sbjct:  106 KLKVQNKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPSYEPHGIPLIYDGVPVTLTPEQEEIASFFAAMPADGPQLGNPKTAAMFTKNFFADFRASLGKNHVIKDIKKCNFERIQAHLNEIRDAKKERTKEEKAPEKAKKDEELYRHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVMPEEVTINVGMEDRVPPCLTPGHAWKEVI 327          
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A2P4XSG9_9STRA (DNA topoisomerase (Fragment) n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XSG9_9STRA)

HSP 1 Score: 243 bits (620), Expect = 2.190e-74
Identity = 116/222 (52.25%), Postives = 158/222 (71.17%), Query Frame = 1
Query:  148 KVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYAMC-RGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
            K+K  +  +R++MA+KA +WW A+ELP+GI WR+LEHNGV+FP PY PH VP+LY+G+ + LTP+QEE+A++YA   +   QL    TA  FN NFF +F+KVLG  H+++ F   DFSRI  +L+ + E +K  +KEEK  EK  +E +   +GFA VDG  ++VGNF IEPPGLFRGRG+HPK G LK RV PEDVT+N+     +P C +PG AW ++I
Sbjct:  130 KLKVHSKGERLDMAIKAFRWWNAEELPEGIQWRTLEHNGVMFPLPYKPHHVPLLYNGKEIELTPSQEEIASFYAAIPKDGPQLGNPKTAKIFNKNFFTDFKKVLGKQHEVKTFDGCDFSRIATYLEKQREEKKNMTKEEKLPEKEKRELEVFTNGFAFVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVMPEDVTVNVGISDRVPICNVPGHAWKQVI 351          
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: W4G034_9STRA (DNA topoisomerase I n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G034_9STRA)

HSP 1 Score: 249 bits (635), Expect = 2.860e-74
Identity = 118/222 (53.15%), Postives = 159/222 (71.62%), Query Frame = 1
Query:  148 KVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYA-MCRGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
            K+K  +  +R++MA+KA++WW A+ELP+GI WRSLEHNGV+FPP Y PHG+PVLYDG  VTLTP QEE+A+++A M     QL    TA  F  NFF +F+  LG +H I++  K +F +I A L    + +K R+KEEKA EK  K+++  +HGFAI+DG  ++VGNF IEPPGLFRGRG+HPK G LK+ V PE+VT+N+  +  +PPC  PG AW  +I
Sbjct:  102 KLKVQSKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPSYEPHGIPVLYDGVPVTLTPEQEEIASFFAAMPADGPQLGNPKTAAMFTKNFFADFKASLGKNHVIKDIKKCNFEKIQAHLADLRDVKKDRTKEEKAPEKIKKDEELYRHGFAIIDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVLPEEVTINVGMEDRVPPCLTPGHAWKEVI 323          
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A6G0WXZ6_9STRA (TOPEUc domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXZ6_9STRA)

HSP 1 Score: 246 bits (629), Expect = 1.160e-73
Identity = 116/222 (52.25%), Postives = 155/222 (69.82%), Query Frame = 1
Query:  148 KVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYAMCR-GAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
            K+K     +R++MA+KA++WW A+ELP+GI WRSLEHNGV+FPP Y PHG+P+LYDG+   LTP QEE+A+++A       QL    TA  F  NFF +F+  LG +H I++  K DF +I   L+   + RK R+KEEKA EKA K ++   HGFAIVDG  ++VGNF IEPPGLFRGRG+HPK G LK+ V PE+VT+N+  +  +P C +PG AW  +I
Sbjct:   84 KLKVQNKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPTYVPHGIPLLYDGQPAELTPEQEEIASFFASIPLDGPQLGNPKTAAMFTKNFFADFKASLGKNHVIKDIKKCDFEKIRTHLNTLRDERKERTKEEKAPEKAKKNEELFHHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVMPEEVTINIGMEDRVPICTMPGHAWKEVI 305          
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A485L6E4_9STRA (DNA topoisomerase I n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6E4_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.410e-73
Identity = 117/222 (52.70%), Postives = 159/222 (71.62%), Query Frame = 1
Query:  148 KVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYA-MCRGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
            K+K  +  +R++MA+K+++WW ADELP+GI WRSLEHNGV+FP  Y PHGVP+LY+G+ V LTPAQEE+A+++A M     QL    TA  F  NFF +F+  LG  H I++  K DF +I   L+   + +K R+KEEKA EKA K+++  +HGFAIVDG  ++VGNF IEPPGLFRGRG+HPK G LK+ VQP +VT+N+  +  +P C +PG AW  +I
Sbjct:   98 KLKVQSKSERLDMAIKSYRWWNADELPEGIQWRSLEHNGVLFPSVYEPHGVPLLYEGKPVDLTPAQEEIASFFAAMPLDGPQLGNPKTADMFTKNFFADFKSALGKGHAIKDIKKCDFEKIRTHLNELRDVKKERTKEEKAPEKAKKDEELFRHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVQPGEVTINVGMEDRVPQCLVPGHAWKEVI 319          
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A0W8CYM1_PHYNI (DNA topoisomerase I n=11 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CYM1_PHYNI)

HSP 1 Score: 246 bits (629), Expect = 4.400e-73
Identity = 118/222 (53.15%), Postives = 158/222 (71.17%), Query Frame = 1
Query:  148 KVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYAMC-RGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
            K+K  +  +R++MA+KA +WW A+ELP+GI WR+LEHNGV+FPPPY PH VP+LY+G+ + LTP+QEE+A++YA   +   QL    TA  FN NFF +F+KVLG  H+++ F   DFSRI A L+   E +K  +KEEK  EK  +E +   +GFA VDG  ++VGNF IEPPGLFRGRG+HPK G LK RV PEDVT+N+     +P C +PG AW ++I
Sbjct:  133 KLKVHSKSERLDMAIKAFRWWNAEELPEGIQWRTLEHNGVMFPPPYKPHHVPLLYNGKEIELTPSQEEVASFYAAIPKDGPQLGNPKTAKIFNKNFFTDFKKVLGKQHEVKTFEGCDFSRIAAHLEKLREEKKNMTKEEKLPEKEKREMEVFTNGFAFVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVMPEDVTVNVGISDRVPICNVPGHAWKQVI 354          
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A5A8DLB6_CAFRO (TOPEUc domain-containing protein n=4 Tax=Sar TaxID=2698737 RepID=A0A5A8DLB6_CAFRO)

HSP 1 Score: 247 bits (631), Expect = 7.220e-73
Identity = 121/222 (54.50%), Postives = 152/222 (68.47%), Query Frame = 1
Query:  145 GKVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYAMCRGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
            GKVK +  +Q  E A+KA KWWEA   P GI W  LEH GVV  P Y PHGV VLY+G+ V LTP QEE AT++A C  AQQL++  TA TF  NFF ++R +LG  H IQ   K+DF+ I   L+ + EAR A +KEEK   KA KE   LKHGFA+VDG  +++GNF +EPP LFRGRG+HP+AG +K R+ PEDV +N   DA +P CP+PG AW R++
Sbjct:  164 GKVKTLKPMQIAEAAMKAFKWWEAPARPAGIKWTELEHPGVVLAPEYEPHGVKVLYEGKPVDLTPPQEEAATFFAACHNAQQLQDPATAETFMKNFFADWRPILGPGHVIQRMDKVDFTPIVRHLELKREARLAMTKEEKDAIKAEKELLMLKHGFALVDGHIEKMGNFNLEPPSLFRGRGEHPRAGSIKSRLLPEDVQINCGYDAVVPACPLPGHAWSRVV 385          
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A0P1ANU5_PLAHL (Dna topoisomerase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ANU5_PLAHL)

HSP 1 Score: 244 bits (624), Expect = 2.020e-72
Identity = 119/224 (53.12%), Postives = 162/224 (72.32%), Query Frame = 1
Query:  148 KVKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYAMC-RGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLN--LSEDAPIPPCPIPGRAWGRII 810
            K+K  +  +R++MA+KA +WW A+ELP+GI WR+LEHNGV+FPPPY PH VP+LY+G+ + LTP+QEE+A++YA   +   QL    TA  FN NFF +F+KVLG  H++++F + DFSRI   L+   + +K  +KEEK  EK  +E +   +GFA VDG  ++VGNF IEPPGLFRGRG+HPK G LK RV PEDVT+N  +S+ API  C +PG AW ++I
Sbjct:  124 KLKVHSKAERLDMAIKAFRWWNAEELPEGIQWRTLEHNGVMFPPPYKPHHVPLLYNGKEIELTPSQEEVASFYAAIPKDGPQLGNPKTAKIFNKNFFLDFKKVLGKQHEVKKFDECDFSRIATHLEKMRDEKKNMTKEEKLPEKEKREMEVFSNGFAFVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVLPEDVTVNVGISDRAPI--CNVPGHAWKQVI 345          
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A662XU24_9STRA (DNA topoisomerase I n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XU24_9STRA)

HSP 1 Score: 246 bits (627), Expect = 3.150e-72
Identity = 117/226 (51.77%), Postives = 161/226 (71.24%), Query Frame = 1
Query:  145 GKVKRMTV---VQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYAMCRG-AQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
            G V+++ V    +R++MA+KA++WW A+ELP+GI WR+LEHNGV+FPPPYAPH VP+LY+G+ + LTP QEELA++YA       QL    TA  FN NFF +F+K+LG  H+++ F   DFSRI   L+ + E +K+ +KEEK  EK  +E +   +GFA+VDG  ++VGNF IEPPGLFRGRG+HPK G LK RV P DVT+N+     +P C +PG +W ++I
Sbjct:  132 GSVRKLKVHSKSERLDMAIKAYRWWNAEELPEGIQWRTLEHNGVMFPPPYAPHHVPLLYNGQEIELTPVQEELASFYAAIPSDGPQLGNPKTAKIFNKNFFTDFKKLLGRQHEVKSFESCDFSRIAKHLEKQREEKKSMTKEEKQPEKERRETELFTNGFALVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVMPGDVTVNVGISDRVPICNVPGHSWKQVI 357          
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Match: A0A8K1C500_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C500_PYTOL)

HSP 1 Score: 242 bits (618), Expect = 1.790e-71
Identity = 118/226 (52.21%), Postives = 161/226 (71.24%), Query Frame = 1
Query:  145 GKVKRMTV---VQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGVPVLYDGEVVTLTPAQEELATYYAMC-RGAQQLEEEDTALTFNNNFFREFRKVLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTLKHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNLSEDAPIPPCPIPGRAWGRII 810
            G V+++ V    +R++MA+KA++WW+A+ELP+GI WR+LEHNGV+FPP Y PH VP++Y+G+ + LTPAQEELA++YA   +   QL    TA  FN NFF +F+KVLG  H+++ F + DFS I A L+   E +K+ +KEEK  EK  KE +   +GFAIVDG  ++VGNF IEPPGLFRGRG+HPK G LK RV P +VT+N+     +P C +PG AW  +I
Sbjct:  137 GNVRKLKVHSKSERLDMAIKAYRWWKAEELPEGIQWRTLEHNGVMFPPAYVPHKVPLVYNGKQIELTPAQEELASFYAAIPKDGPQLGNPKTAKIFNKNFFTDFKKVLGRGHEVKTFEQCDFSLIAAHLEKLREEKKSMTKEEKQPEKERKELEQFTNGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKERVMPGEVTVNVGISDRVPICNVPGHAWKEVI 362          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68737.16527.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A024UDN4_9STRA1.340e-7654.50DNA topoisomerase I n=2 Tax=Aphanomyces invadans T... [more]
A0A2P4XSG9_9STRA2.190e-7452.25DNA topoisomerase (Fragment) n=2 Tax=Phytophthora ... [more]
W4G034_9STRA2.860e-7453.15DNA topoisomerase I n=3 Tax=Aphanomyces astaci Tax... [more]
A0A6G0WXZ6_9STRA1.160e-7352.25TOPEUc domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A485L6E4_9STRA1.410e-7352.70DNA topoisomerase I n=1 Tax=Aphanomyces stellatus ... [more]
A0A0W8CYM1_PHYNI4.400e-7353.15DNA topoisomerase I n=11 Tax=Phytophthora TaxID=47... [more]
A0A5A8DLB6_CAFRO7.220e-7354.50TOPEUc domain-containing protein n=4 Tax=Sar TaxID... [more]
A0A0P1ANU5_PLAHL2.020e-7253.13Dna topoisomerase n=1 Tax=Plasmopara halstedii Tax... [more]
A0A662XU24_9STRA3.150e-7251.77DNA topoisomerase I n=1 Tax=Nothophytophthora sp. ... [more]
A0A8K1C500_PYTOL1.790e-7152.21Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68737contigM-pyrifera_M_contig68737:2..811 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score255.4
Seed ortholog evalue3e-65
Seed eggNOG ortholog157072.XP_008867977.1
Preferred nameTOP1
KEGG koko:K03163
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000228,GO:0000932,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0001650,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003697,GO:0003824,GO:0003916,GO:0003917,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006265,GO:0006325,GO:0006338,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007059,GO:0007623,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009059,GO:0009330,GO:0009987,GO:0010468,GO:0012501,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016853,GO:0017076,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019904,GO:0030554,GO:0031298,GO:0031974,GO:0031981,GO:0032501,GO:0032553,GO:0032555,GO:0032559,GO:0032922,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0035639,GO:0035770,GO:0036094,GO:0036211,GO:0036464,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043565,GO:0043596,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044454,GO:0044464,GO:0046483,GO:0048511,GO:0050789,GO:0050896,GO:0051276,GO:0060255,GO:0065007,GO:0070013,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097100,GO:0097159,GO:0097367,GO:0140096,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1990837,GO:1990904
EggNOG free text desc.DNA topoisomerase type I activity
EggNOG OGsCOG3569@1,KOG0981@2759
EC5.99.1.2
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032
Exons1
Model size810
Cds size810
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816579.4746435-CDS-M-pyrifera_M_contig68737:1..8111622816579.4746435-CDS-M-pyrifera_M_contig68737:1..811Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68737 2..811 -
1692278058.0752468-CDS-M-pyrifera_M_contig68737:1..8111692278058.0752468-CDS-M-pyrifera_M_contig68737:1..811Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68737 2..811 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68737.16527.1prot_M-pyrifera_M_contig68737.16527.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig68737 2..811 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig68737.16527.1

>prot_M-pyrifera_M_contig68737.16527.1 ID=prot_M-pyrifera_M_contig68737.16527.1|Name=mRNA_M-pyrifera_M_contig68737.16527.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=270bp
KRRRTSRAKSAGRKTAKGAKGKKAAPKKKAPAKKGGKKGASAKKSVARGK
VKRMTVVQRVEMAVKAHKWWEADELPKGIHWRSLEHNGVVFPPPYAPHGV
PVLYDGEVVTLTPAQEELATYYAMCRGAQQLEEEDTALTFNNNFFREFRK
VLGVDHKIQEFSKLDFSRIHAFLDARSEARKARSKEEKAVEKAAKEQQTL
KHGFAIVDGVPQRVGNFVIEPPGLFRGRGKHPKAGRLKRRVQPEDVTLNL
SEDAPIPPCPIPGRAWGRII
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mRNA from alignment at M-pyrifera_M_contig68737:2..811-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig68737.16527.1 ID=mRNA_M-pyrifera_M_contig68737.16527.1|Name=mRNA_M-pyrifera_M_contig68737.16527.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig68737:2..811- (Macrocystis pyrifera P11B4 male)
AAACGGCGTCGCACATCTCGTGCCAAGAGTGCAGGTAGGAAGACTGCAAA AGGGGCGAAAGGGAAGAAAGCTGCTCCAAAGAAGAAGGCCCCTGCGAAAA AAGGTGGAAAGAAGGGTGCAAGTGCGAAGAAGAGTGTGGCACGGGGCAAA GTGAAGCGGATGACTGTGGTGCAACGAGTAGAAATGGCTGTCAAGGCTCA CAAGTGGTGGGAAGCAGACGAACTTCCAAAAGGGATCCATTGGCGCAGTT TGGAGCATAATGGAGTTGTTTTCCCTCCTCCGTATGCACCACATGGGGTT CCTGTGCTGTATGATGGGGAAGTAGTCACTCTGACACCTGCACAAGAAGA GTTGGCGACGTATTATGCCATGTGTCGAGGAGCACAGCAATTGGAGGAAG AAGATACTGCATTGACGTTCAACAACAACTTTTTCCGCGAGTTTCGAAAG GTCTTGGGTGTTGACCACAAGATTCAAGAGTTTTCCAAGCTGGATTTCAG CAGAATTCATGCCTTTTTGGATGCAAGATCTGAAGCTCGGAAAGCACGGA GCAAGGAGGAAAAGGCTGTGGAAAAAGCGGCAAAGGAACAACAAACTCTC AAGCATGGGTTTGCAATTGTCGATGGAGTACCACAACGAGTGGGAAACTT TGTCATTGAACCACCCGGGTTGTTCCGAGGCCGCGGGAAACACCCCAAAG CCGGCAGATTGAAACGCCGCGTGCAGCCTGAAGATGTCACTCTCAACTTG AGCGAGGATGCACCAATTCCACCATGCCCCATTCCAGGTCGTGCTTGGGG CCGCATCATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig68737:2..811-

>mRNA_M-pyrifera_M_contig68737.16527.1 ID=mRNA_M-pyrifera_M_contig68737.16527.1|Name=mRNA_M-pyrifera_M_contig68737.16527.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1620bp|location=Sequence derived from alignment at M-pyrifera_M_contig68737:2..811- (Macrocystis pyrifera P11B4 male)
AAACGGCGTCGCACATCTCGTGCCAAGAGTGCAGGTAGGAAGACTGCAAA
AGGGGCGAAAGGGAAGAAAGCTGCTCCAAAGAAGAAGGCCCCTGCGAAAA
AAGGTGGAAAGAAGGGTGCAAGTGCGAAGAAGAGTGTGGCACGGGGCAAA
GTGAAGCGGATGACTGTGGTGCAACGAGTAGAAATGGCTGTCAAGGCTCA
CAAGTGGTGGGAAGCAGACGAACTTCCAAAAGGGATCCATTGGCGCAGTT
TGGAGCATAATGGAGTTGTTTTCCCTCCTCCGTATGCACCACATGGGGTT
CCTGTGCTGTATGATGGGGAAGTAGTCACTCTGACACCTGCACAAGAAGA
GTTGGCGACGTATTATGCCATGTGTCGAGGAGCACAGCAATTGGAGGAAG
AAGATACTGCATTGACGTTCAACAACAACTTTTTCCGCGAGTTTCGAAAG
GTCTTGGGTGTTGACCACAAGATTCAAGAGTTTTCCAAGCTGGATTTCAG
CAGAATTCATGCCTTTTTGGATGCAAGATCTGAAGCTCGGAAAGCACGGA
GCAAGGAGGAAAAGGCTGTGGAAAAAGCGGCAAAGGAACAACAAACTCTC
AAGCATGGGTTTGCAATTGTCGATGGAGTACCACAACGAGTGGGAAACTT
TGTCATTGAACCACCCGGGTTGTTCCGAGGCCGCGGGAAACACCCCAAAG
CCGGCAGATTGAAACGCCGCGTGCAGCCTGAAGATGTCACTCTCAACTTG
AGCGAGGATGCACCAATTCCACCATGCCCCATTCCAGGTCGTGCTTGGGG
CCGCATCATCAAACGGCGTCGCACATCTCGTGCCAAGAGTGCAGGTAGGA
AGACTGCAAAAGGGGCGAAAGGGAAGAAAGCTGCTCCAAAGAAGAAGGCC
CCTGCGAAAAAAGGTGGAAAGAAGGGTGCAAGTGCGAAGAAGAGTGTGGC
ACGGGGCAAAGTGAAGCGGATGACTGTGGTGCAACGAGTAGAAATGGCTG
TCAAGGCTCACAAGTGGTGGGAAGCAGACGAACTTCCAAAAGGGATCCAT
TGGCGCAGTTTGGAGCATAATGGAGTTGTTTTCCCTCCTCCGTATGCACC
ACATGGGGTTCCTGTGCTGTATGATGGGGAAGTAGTCACTCTGACACCTG
CACAAGAAGAGTTGGCGACGTATTATGCCATGTGTCGAGGAGCACAGCAA
TTGGAGGAAGAAGATACTGCATTGACGTTCAACAACAACTTTTTCCGCGA
GTTTCGAAAGGTCTTGGGTGTTGACCACAAGATTCAAGAGTTTTCCAAGC
TGGATTTCAGCAGAATTCATGCCTTTTTGGATGCAAGATCTGAAGCTCGG
AAAGCACGGAGCAAGGAGGAAAAGGCTGTGGAAAAAGCGGCAAAGGAACA
ACAAACTCTCAAGCATGGGTTTGCAATTGTCGATGGAGTACCACAACGAG
TGGGAAACTTTGTCATTGAACCACCCGGGTTGTTCCGAGGCCGCGGGAAA
CACCCCAAAGCCGGCAGATTGAAACGCCGCGTGCAGCCTGAAGATGTCAC
TCTCAACTTGAGCGAGGATGCACCAATTCCACCATGCCCCATTCCAGGTC
GTGCTTGGGGCCGCATCATC
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