mRNA_M-pyrifera_M_contig68700.16521.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig68700.16521.1
Unique NamemRNA_M-pyrifera_M_contig68700.16521.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig68700.16521.1 vs. uniprot
Match: A0A0D0B9U8_9AGAR (DNA ligase n=1 Tax=Gymnopus luxurians FD-317 M1 TaxID=944289 RepID=A0A0D0B9U8_9AGAR)

HSP 1 Score: 124 bits (312), Expect = 8.410e-28
Identity = 108/358 (30.17%), Postives = 163/358 (45.53%), Query Frame = 1
Query:    4 PFRILCDRFERAAACSGARSQWKRFSHVWPPQNQRLW--ENGDDVFPYLRLVLPDMDAERRAYGIREKRLPSELGAALMLPASSPLMHALERWKT-GESELCVRGDLPSTVQNVLTRLGLKSGPCTLTIRDINARLDELAHIQTTTVVGRERRQALLREILSKDLAPREAAWFFRIVLRDLRIGVSGDGFLRRLHSGALELFRTQASLRQVAM----SATKLLAGVKVALRPGQPCVPMLCAKVVGKTPAATV---VKTAGDDDLYCEPKLDGERRLIH--------LTKDGR--VHAFTRH------SKPCSKEVDILKDAVRALPCSAVVLDGEVVAKHVTEGYMLAFGTMRTVAI 999
            PF  L   F R  A      + K+  H W     + W  E GDD++P LRL+LP  D ER  YG++E  L       + L    P    L  WK   E      GD P+ V  V+ +        TL I ++N+ LDEL++      +G++  QA + + +     P E +W  RI+L+DL I V  +      H  A +L+ T + L++VA     S T+L A  K  ++  QP  PMLC     K P  T+   VK  G  + Y E KLDGER  +H         ++ G+   H + +H      ++  +K +D   D++        +LDGE++         L FGT++T A+
Sbjct:   39 PFGALVGLFHRLQA-ERKHDRRKKLIHFW----FKYWRSEVGDDLYPVLRLILPQKDRERAVYGLKETALAKSYIKLIPLNKKDPDAQRLLNWKKPSERNKSASGDFPTVVYEVVKKRSTVIDS-TLRIDELNSFLDELSNS-----IGKQDTQAKILQRIYNRATPNEQSWIVRIILKDLIISVKENTVFSVFHPDAQDLYNTCSDLKKVAWTLWDSETRLNADDKT-VQLFQPFAPMLC-----KRPTKTIEHSVKEMGGAEFYIEEKLDGERIQVHKRGNEYFYCSRKGKDYTHLYGKHVGTGNLTRYLAKALDERVDSI--------ILDGEMLVWDPISERNLPFGTLKTAAL 371          
BLAST of mRNA_M-pyrifera_M_contig68700.16521.1 vs. uniprot
Match: A0A1Y2EUM6_9FUNG (DNA ligase (Fragment) n=1 Tax=Neocallimastix californiae TaxID=1754190 RepID=A0A1Y2EUM6_9FUNG)

HSP 1 Score: 118 bits (296), Expect = 1.030e-25
Identity = 94/318 (29.56%), Postives = 151/318 (47.48%), Query Frame = 1
Query:   70 KRFSHVWPPQNQRLWENGDDVFPYLRLVLPDMDAERRAYGIREKRLPSELGAALMLPASSPLMHALERWKT-GESELCVRGDLPSTVQNVLTRLGLKSGPCTLTIRDINARLDELAHIQTTTVVGRERRQALLREILSKDLAPREAAWFFRIVLRDLRIGVSGDGFLRRLHSGALELFRTQASLRQVAMSATKLLAGVKV-ALRPGQPCVPMLCAKVVGKTPAATVVKTAGDDDLYCEPKLDGERRLIHLTKDGRVHAFTRHSKPCSKEVDILKDAVRALP---------CSAVVLDGEVVAKHVTEGYMLAFGTMRT 990
            +R+ + W     RL+  G  +FP +RL+LP +D +R  Y I+EK L       L LP  SP    L  W+  G++++   GD  S +  VL +    SG  T+TI DIN +LD L   ++      E+++  +R I    L P E  W  RI+L+DL+IG++ +  L   H  AL +F   + L +V  +       +++  L    P  PMLC ++    P  + +K    +  Y E KLDGER  +H+ K+G    ++R +   +K     K+     P             +LDGE++         L FG+++T
Sbjct:   38 QRYFNKW-----RLY--GGSLFPVIRLLLPHIDKKRLNYRIKEKTLSKIYVNVLCLPPESPDGRTLINWRIPGKAKMKTVGDFASVLYGVLLKRSTFSGKSTMTIADINDKLDLLNQAESF-----EQQKDCIR-IFYASLTPLEQKWIVRIILKDLKIGLTENSILNIYHPDALNMFNVCSDLYEVVENLNDTSKRIEIEGLSVFHPFQPMLCERI----PINSCLKILNTNIFYIENKLDGERIQLHM-KNGEFQYWSRKATQYTKAYGSNKNEGTLTPYIYDVFNPSIYECILDGEMLVYDPNIDDFLPFGSLKT 337          
BLAST of mRNA_M-pyrifera_M_contig68700.16521.1 vs. uniprot
Match: A0A1Y1VE98_9FUNG (DNA ligase n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VE98_9FUNG)

HSP 1 Score: 118 bits (295), Expect = 1.400e-25
Identity = 92/318 (28.93%), Postives = 150/318 (47.17%), Query Frame = 1
Query:   70 KRFSHVWPPQNQRLWENGDDVFPYLRLVLPDMDAERRAYGIREKRLPSELGAALMLPASSPLMHALERWKT-GESELCVRGDLPSTVQNVLTRLGLKSGPCTLTIRDINARLDELAHIQTTTVVGRERRQALLREILSKDLAPREAAWFFRIVLRDLRIGVSGDGFLRRLHSGALELFRTQASLRQVAMSATKLLAGVKV-ALRPGQPCVPMLCAKVVGKTPAATVVKTAGDDDLYCEPKLDGERRLIHLTKDGRVHAFTRHSKPCSKEVDILKDAVRALP---------CSAVVLDGEVVAKHVTEGYMLAFGTMRT 990
            +R+ + W     RL+  G  +FP +RL+LP +D +R  Y I+EK L       L LP  SP    L  W+  G++++   GD  S +  VL +    +G   LTI DIN +LD+L   ++      ++++  +R   +  L P E  W  RI+L+DL+IG++ +  L   H  AL +F   + L +V  S       +++  L    P  PMLC ++    P    +K    +  Y E KLDGER  +H+ K+G    ++R +   +K     K+     P             +LDGE++         L FG+++T
Sbjct:   39 QRYFNKW-----RLY--GGSLFPVIRLLLPHIDKKRLNYRIKEKTLSKIYVNVLCLPPESPDGRTLINWRIPGKAKMKTVGDFASVLYGVLLKRSTFTGKSVLTISDINEKLDQLNQAESF-----DQQKDCMRSFYTS-LTPLEQKWIVRIILKDLKIGLTENSILNIYHPDALNMFNVCSDLYEVVESLNDSSKRIEINGLSVFHPFQPMLCERI----PINNCLKVLNTNTFYIENKLDGERIQLHM-KNGEFQYWSRKATQYTKAYGSNKNNGTLTPFIYDVFNPSIYECILDGEMLVYDPNIDDFLPFGSLKT 338          
BLAST of mRNA_M-pyrifera_M_contig68700.16521.1 vs. uniprot
Match: A0A1Y2VC47_9PEZI (DNA ligase n=2 Tax=unclassified Hypoxylon TaxID=2614581 RepID=A0A1Y2VC47_9PEZI)

HSP 1 Score: 118 bits (295), Expect = 1.420e-25
Identity = 99/332 (29.82%), Postives = 148/332 (44.58%), Query Frame = 1
Query:  115 ENGDDVFPYLRLVLPDMDAERRAYGIREKRLPSELGAALMLPASSPLMHALERWKTGESELCVR--GDLPSTVQNVLTRLGLKSGPCTLTIRDINARLDELAHIQTTTVVGRERRQALLREILSKDLAPREAAWFFRIVLRDLRIGVSGDGFLRRLHSGALELFRTQASLRQVAMSATKLLAGVKVALRPGQPCV-------PMLC--------AKVVGKTPAATVVKTAGDDDLYCEPKLDGERRLIHLTKDGRVHAFTRHSKPCSKEVDI------------------LKDAVRALPCSAVVLDGEVVAKHVTEGYMLAFGTMRTVAIAE 1005
            E G+D +P +RL+LP  D +R  YG++E  +   L   + +  +S   +++  WK        R  GD      +VL++  ++  P  + I D+N  LD+LA          E  Q  + EI  + +   E  W  RI+L+ +R+G +   FL   H  A +LF   +SLRQV       L   K  L  GQ  V       PMLC         K+V K  +   V+  GDD+ + E KLDGER  +H+ +D  +    R      K  D                   LKDA  A     ++LDGE++        +LAFGT++T A+AE
Sbjct:  102 EVGNDFYPAMRLILPSADRDRGMYGLKESNIGRLLVKLMRIDRNSEDGYSILHWKEPVQSGTARAAGDFAGRCYDVLSKRPMRIEPGDMRIADVNEMLDKLA------AASGESEQLPIFEIFYQRMNAEELRWLIRIILKQMRVGATERSFLEVWHPDAQDLFSVSSSLRQVCWD----LYDPKFRLTDGQTNVTLMQCFQPMLCHYQMSTSFQKMVDKLNSQNRVE--GDDEFWIEEKLDGERMQLHMQEDDDIPGGKRFRFWSRKAKDYTYLYGDGFEDENSSLTRHLKDAFAA-GVRNIILDGEMIVWDPELDKVLAFGTLKTAALAE 420          
BLAST of mRNA_M-pyrifera_M_contig68700.16521.1 vs. uniprot
Match: A0A1Y1UYW6_9FUNG (DNA ligase n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1UYW6_9FUNG)

HSP 1 Score: 114 bits (286), Expect = 2.370e-25
Identity = 88/298 (29.53%), Postives = 140/298 (46.98%), Query Frame = 1
Query:  130 VFPYLRLVLPDMDAERRAYGIREKRLPSELGAALMLPASSPLMHALERWKT-GESELCVRGDLPSTVQNVLTRLGLKSGPCTLTIRDINARLDELAHIQTTTVVGRERRQALLREILSKDLAPREAAWFFRIVLRDLRIGVSGDGFLRRLHSGALELFRTQASLRQVAMSATKLLAGVKV-ALRPGQPCVPMLCAKVVGKTPAATVVKTAGDDDLYCEPKLDGERRLIHLTKDGRVHAFTRHSKPCSKEVDILKDAVRALP---------CSAVVLDGEVVAKHVTEGYMLAFGTMRT 990
            +FP +RL+LP +D +R  Y I+EK L       L LP  SP    L  W+  G++++   GD  S +  VL +    +G   LTI DIN +LD L   ++      E+++  +R   +  L P E  W  RI+L+DL+IG++ +  L   H  AL +F   + L +V  S       +++  L    P  PMLC ++    P  + +K    +  Y E KLDGER  +H+ KDG    ++R +   +      K+     P             +LDGE++         L FG+++T
Sbjct:    5 LFPVIRLLLPHIDKKRLNYRIKEKTLSKIYVNVLCLPPESPDGRTLINWRIPGKAKMKTVGDFASVLYGVLLKRSTFTGKSILTIADINEKLDLLNQAESF-----EQQKDCIRSFYTT-LTPLEQKWIVRIILKDLKIGLTENSILNIYHPDALNMFNVCSDLYEVVESLNDSSKRIEIEGLSVFHPFQPMLCERI----PINSCLKILNTNVFYIENKLDGERIQLHM-KDGEFQYWSRKATQYTNAYGSNKNEGTLTPFIYDVFNPSIDECILDGEMLVYDPNIDDFLPFGSLKT 291          
BLAST of mRNA_M-pyrifera_M_contig68700.16521.1 vs. uniprot
Match: D8Q0I4_SCHCM (DNA ligase n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) TaxID=578458 RepID=D8Q0I4_SCHCM)

HSP 1 Score: 117 bits (292), Expect = 3.570e-25
Identity = 108/360 (30.00%), Postives = 159/360 (44.17%), Query Frame = 1
Query:    1 MPFRILCDRFERAAACSGARSQWKRFSHVWPPQNQRLWENGDDVFPYLRLVLPDMDAERRAYGIREKRLPSELGAALMLPASSPLMHALERWKTG---ESELCVR----GDLPSTVQNVLTRLGLKSGPCTLTIRDINARLDELAHIQTTTVVGRERRQALLREILSKDLAPREAAWFFRIVLRDLRIGVSGDGFLRRLHSGALELFRTQASLRQVAMSATKLLAGVKVALRP-------GQPCVPMLCAKVVGKTPAATVVKTAGDDD---LYCEPKLDGERRLIHLTKDGRVHAFT-RHSKPCSKEVDILKDAVRALP---------CSAVVLDGEVVAKHVTEGYMLAFGTMRTVAI 999
            +PF IL   FE+     G R Q KR   +    N+   +NG D++P LRL+LP  D ER  YG++EK L       + L  + P    L  WK      +  C      GD P+ +  V+++    +   TLTI DIN  LD+LA +       +  +Q+ + + L  +  P +  WF RI+L+D+ I V         H  A  L+ T + L++VA      LA   + L         GQP +PMLC     K P   +  TA + D      E KLDGER  +H  K G  + ++ R  K  +        A    P           + +LDGE++      G  L FGT++T A+
Sbjct:   36 LPFHILTAFFEKL---QGERKQEKRRKLLNHWFNKWREDNGPDLYPVLRLILPHRDRERNVYGLKEKALAKLYIKVIPLNKNDPDAMRLLYWKKPTEKHASTCASSAASGDFPTVLYEVVSKRSSVT-QSTLTIDDINDMLDQLADMS-----NKSEKQSKIIQRLYNEATPEQQLWFARIILKDMNISVKETTVFAVFHPDAQALYNTCSDLKKVAWQ----LADPSIRLHEDEKQVKLGQPFMPMLC-----KRPMKRIEDTAQEMDGSEFIIEEKLDGERMQLH--KMGNQYYYSSRKGKDYTYLYGSHVGAGSLTPYIAHRFHKQADSAILDGEMLVWDPISGRNLPFGTLKTAAL 375          
BLAST of mRNA_M-pyrifera_M_contig68700.16521.1 vs. uniprot
Match: A0A1Y1WZ49_9FUNG (DNA ligase n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1WZ49_9FUNG)

HSP 1 Score: 116 bits (291), Expect = 4.690e-25
Identity = 89/301 (29.57%), Postives = 141/301 (46.84%), Query Frame = 1
Query:  121 GDDVFPYLRLVLPDMDAERRAYGIREKRLPSELGAALMLPASSPLMHALERWKT-GESELCVRGDLPSTVQNVLTRLGLKSGPCTLTIRDINARLDELAHIQTTTVVGRERRQALLREILSKDLAPREAAWFFRIVLRDLRIGVSGDGFLRRLHSGALELFRTQASLRQVAMSATKLLAGVKV-ALRPGQPCVPMLCAKVVGKTPAATVVKTAGDDDLYCEPKLDGERRLIHLTKDGRVHAFTRHSKPCSKEVDILKDAVRALP---------CSAVVLDGEVVAKHVTEGYMLAFGTMRT 990
            G  +FP +RL+LP +D +R  Y I+EK L       L LP  SP    L  W+  G++++   GD  S +  VL +    +G   LTI DIN +LD L   ++      E+++  +R   +  L P E  W  RI+L+DL+IG++ +  L   H  AL +F   + L +V  S       +++  L    P  PMLC ++    P  + +K    +  Y E KLDGER  +H+ KDG    ++R +   +      K+     P             +LDGE++         L FG+++T
Sbjct:   47 GGSLFPVIRLLLPHIDKKRLNYRIKEKTLSKIYVNVLCLPPESPDGRTLINWRIPGKAKMKTVGDFASVLYGVLLKRSTFTGKSILTIADINEKLDLLNQAESF-----EQQKDCIRSFYTT-LTPLEQKWIVRIILKDLKIGLTENSILNIYHPDALNMFNVCSDLYEVVESLNDSSKRIEIEGLSVFHPFQPMLCERI----PINSCLKILNTNVFYIENKLDGERIQLHM-KDGEFQYWSRKATQYTNAYGSNKNEGTLTPFIYDVFNPSIDECILDGEMLVYDPNIDDFLPFGSLKT 336          
BLAST of mRNA_M-pyrifera_M_contig68700.16521.1 vs. uniprot
Match: A0A4Q2DHS4_9AGAR (DNA ligase n=1 Tax=Candolleomyces aberdarensis TaxID=2316362 RepID=A0A4Q2DHS4_9AGAR)

HSP 1 Score: 116 bits (291), Expect = 4.920e-25
Identity = 99/343 (28.86%), Postives = 154/343 (44.90%), Query Frame = 1
Query:    4 PFRILCDRFERAAACSGARSQWKRFSHVWPPQNQRLWENGDDVFPYLRLVLPDMDAERRAYGIREKRLPSELGAALMLPASSPLMHALERWKTGESELCVRGDLPSTVQNVLT-RLGLKSGPCTLTIRDINARLDELAHIQTTTVVGRERRQALLREILSKDLAPREAAWFFRIVLRDLRIGVSGDGFLRRLHSGALELFRTQASLRQVAMSAT---KLLAGVKVALRPGQPCVPMLCAKVVGKTPAATVVKTAGDDDLYCEPKLDGERRLIH--------LTKDGRVHAFTRHSKPCSKEVDILKDAVRALPCSAVVLDGEVVAKHVTEGYMLAFGTMRTVA 996
            PF +L   FE  A       + ++  + W    ++  E GDD++P LRL+LP  D ER  YG++EK +       + L    P    L  WK    +    GD P  +  V+  R  +  G  TLTI D+N  L++LA     T+  ++ +  +LR +   + +P E  W  RI+L+D+ I V         H  A +LF T + L++VA   +     LA    A++  Q   PMLC + +GK      VK  G  D   E KLDGER  +H         ++ G+ + +       +  +    DA        ++LDGE++         L FGT++T A
Sbjct:   35 PFSVLACLFENLAD-EKKHERRRKLINTWFVHWRQ--EKGDDLYPVLRLLLPQKDRERPIYGLKEKSIAKIFIKLIGLGTRDPDAIRLLNWKKPTEKDKASGDFPQVLYEVVKKRSSIIEG--TLTIDDVNEVLNDLAK----TMRKQDAQSKILRRVYD-NCSPEEQRWIVRIILKDMNISVREATVFSVFHPDAQDLFNTCSDLKRVAWELSIPFSRLAEENKAVQLFQAFAPMLCKRPMGKI--EETVKEMGGYDFIVEEKLDGERMQLHKRGNEYFYCSRKGKDYTYLYGKDGKNGSLTPFIDAAFDPRIKDIILDGEMLVWDPVSQRHLPFGTLKTAA 365          
BLAST of mRNA_M-pyrifera_M_contig68700.16521.1 vs. uniprot
Match: A0A383V3P2_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383V3P2_TETOB)

HSP 1 Score: 112 bits (280), Expect = 8.340e-25
Identity = 95/305 (31.15%), Postives = 143/305 (46.89%), Query Frame = 1
Query:  127 DVFPYLRLVLPDMDAERRAYGIREKRLPSELGAALMLPASSPLMHALERWKTGESELCVRGDLPSTVQNVLTRLGLKSGPC---------TLTIRDINARLDELAHIQTTTVVGRERRQALLREILSKDLAPREAAWFFRIVLRDLRIGVSGDGFLRRLHSGALELFRTQASLRQVAMS-ATKLLAGVKVALRPGQPCVPMLCAKVVGKTPAATVVKTAGDDDLYCEPKLDGERRLIHLTKDGRVHAFTRHSKPCSKEVD--ILKDAVR-----ALPCSAVVLDGEVVAKHVTEGYMLAFGTMRT 990
            D+F   RL+LP  D+ER  YG++E  L   L  A  L A S    A + WK G       G+ P  +++ L      SG C           ++ ++N  LD+LA         +E++ A++R++ +   A R+  W  R++++DL+IG+S D  LR  H  AL+L     SL+QV    A+      +  + PG      LCA+      A + +K A      CE KLDG R  IH+ + G V  F+R  +   +  D  +  D VR     A P  AV+LDGE+V      G    FG +R+
Sbjct:   30 DIFQIFRLLLPAEDSERVRYGLKEDSLARLLVEACGLNADSASAKAAKNWKKGTFSA---GNFPEVMEHFLL-----SGACLPRDDPRAKATSVAEVNGLLDKLAQSDK-----KEQQAAVMRQLFACCSA-RQVKWLLRVIVKDLKIGMSKDRMLRLFHPDALDLLNITNSLKQVCEDLASPSFRMARKDIMPGCAIKMQLCARANSLEEAFSRMKGAA---FSCEVKLDGYRLQIHV-RGGEVMYFSRRGREHGRLSDYVVFDDVVRRQVVLADPGDAVILDGELVVWRKARGVFEPFGGVRS 316          
BLAST of mRNA_M-pyrifera_M_contig68700.16521.1 vs. uniprot
Match: A0A7S1QPE8_NEODS (DNA ligase (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1QPE8_NEODS)

HSP 1 Score: 115 bits (288), Expect = 1.090e-24
Identity = 102/345 (29.57%), Postives = 155/345 (44.93%), Query Frame = 1
Query:    1 MPFRILCDRFERAAACSGARSQWKRFSHVWPPQNQRLWENGDDVFPYLRLVLPDMDAERRAYGIREKRLPSELGAALMLPASSPLMHALERWKTGESELCVRGDLPSTVQNVLTRLGLKSGPCTLTIRDINARLDELAHIQTTTVVGRERRQALLREILSKDLAPREAAWFFRIVLRDLRIGVSGDGFLRRLHSGALELFRTQASLRQVAMSAT--KLLAGVKVALRPG----QPCVPMLCAKVVGKTPAATVVKTAGDDDLYCEPKLDGERRLIHLTKDGRVHAFTRHSKPCSKEVDILKDAV---RALPC-SAVVLDGEVVAKHVTEGYMLAFGTMRTVAIAE 1005
            M F  LC RFE  +  S    + K    +W   +      G D FP++RL++P +D +R  YG+RE ++       L L  +SP       WK               V  VL++    S    L++  +N  LD+LA     +VV  + +++ L  +L    A  E  W  RI+ +++++G+     L   H  ALEL+     L+ V    T  K L  V    R G    QP  PML A VV     A + K   D+ L+ EPK DGER +IH+T D ++  +TR+++  + +     DAV   +  P  S  +LDGE +           FG  RT A ++
Sbjct:   35 MAFADLCSRFETISRVSDRSQRLKVLESLWRSLS------GSDYFPFMRLIVPQLDTQRATYGLRESKIARYYIDLLGLSQTSPDAERFRHWKDPSKNSVDATHFSDVVFVVLSKRAYVSSE-RLSVASVNLYLDQLA-----SVVSPDEKKSTLMTLLRATSAL-EQKWLIRIITKEMKMGMQHGSILAAFHPSALELYNNTNDLQYVCTKCTDPKELV-VSGDARSGIFLMQPLKPML-ASVVDSAKLAVLSK---DERLFVEPKYDGERMMIHITND-KIMYWTRNARNYTAQYGPKYDAVLRQQLKPTVSNCILDGEFLLYDGASKRFCDFGQNRTFATSD 360          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68700.16521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D0B9U8_9AGAR8.410e-2830.17DNA ligase n=1 Tax=Gymnopus luxurians FD-317 M1 Ta... [more]
A0A1Y2EUM6_9FUNG1.030e-2529.56DNA ligase (Fragment) n=1 Tax=Neocallimastix calif... [more]
A0A1Y1VE98_9FUNG1.400e-2528.93DNA ligase n=1 Tax=Piromyces finnis TaxID=1754191 ... [more]
A0A1Y2VC47_9PEZI1.420e-2529.82DNA ligase n=2 Tax=unclassified Hypoxylon TaxID=26... [more]
A0A1Y1UYW6_9FUNG2.370e-2529.53DNA ligase n=1 Tax=Anaeromyces robustus TaxID=1754... [more]
D8Q0I4_SCHCM3.570e-2530.00DNA ligase n=1 Tax=Schizophyllum commune (strain H... [more]
A0A1Y1WZ49_9FUNG4.690e-2529.57DNA ligase n=1 Tax=Anaeromyces robustus TaxID=1754... [more]
A0A4Q2DHS4_9AGAR4.920e-2528.86DNA ligase n=1 Tax=Candolleomyces aberdarensis Tax... [more]
A0A383V3P2_TETOB8.340e-2531.15Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A7S1QPE8_NEODS1.090e-2429.57DNA ligase (Fragment) n=1 Tax=Neobodo designis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68700contigM-pyrifera_M_contig68700:2..1132 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score120.2
Seed ortholog evalue1.9e-24
Seed eggNOG ortholog5334.XP_003032648.1
Preferred nameLIG4
KEGG rclassRC00005
KEGG koko:K10777
KEGG ReactionR00381
KEGG Pathwayko03450,map03450
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000228,GO:0000726,GO:0000785,GO:0000790,GO:0001302,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006289,GO:0006297,GO:0006302,GO:0006303,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007568,GO:0007569,GO:0008144,GO:0008150,GO:0008152,GO:0009405,GO:0009987,GO:0016874,GO:0016886,GO:0017076,GO:0030447,GO:0030554,GO:0031974,GO:0031981,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032807,GO:0032991,GO:0033554,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044182,GO:0044237,GO:0044238,GO:0044260,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0046483,GO:0048869,GO:0050896,GO:0051103,GO:0051704,GO:0051716,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363
EggNOG free text desc.DNA ligase
EggNOG OGs228V1@155619,38C9E@33154,3NUX9@4751,3UZ1H@5204,3W508@5338,COG1793@1,KOG0966@2759
EC6.5.1.1
COG Functional cat.L
Best tax levelAgaricales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Exons2
Model size1011
Cds size1011
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816579.2485259-CDS-M-pyrifera_M_contig68700:1..5801622816579.2485259-CDS-M-pyrifera_M_contig68700:1..580Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68700 2..580 -
1692278057.9733684-CDS-M-pyrifera_M_contig68700:1..5801692278057.9733684-CDS-M-pyrifera_M_contig68700:1..580Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68700 2..580 -
1622816579.2630563-CDS-M-pyrifera_M_contig68700:700..11321622816579.2630563-CDS-M-pyrifera_M_contig68700:700..1132Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68700 701..1132 -
1692278057.9880967-CDS-M-pyrifera_M_contig68700:700..11321692278057.9880967-CDS-M-pyrifera_M_contig68700:700..1132Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68700 701..1132 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68700.16521.1prot_M-pyrifera_M_contig68700.16521.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig68700 2..1132 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig68700.16521.1

>prot_M-pyrifera_M_contig68700.16521.1 ID=prot_M-pyrifera_M_contig68700.16521.1|Name=mRNA_M-pyrifera_M_contig68700.16521.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=337bp
MPFRILCDRFERAAACSGARSQWKRFSHVWPPQNQRLWENGDDVFPYLRL
VLPDMDAERRAYGIREKRLPSELGAALMLPASSPLMHALERWKTGESELC
VRGDLPSTVQNVLTRLGLKSGPCTLTIRDINARLDELAHIQTTTVVGRER
RQALLREILSKDLAPREAAWFFRIVLRDLRIGVSGDGFLRRLHSGALELF
RTQASLRQVAMSATKLLAGVKVALRPGQPCVPMLCAKVVGKTPAATVVKT
AGDDDLYCEPKLDGERRLIHLTKDGRVHAFTRHSKPCSKEVDILKDAVRA
LPCSAVVLDGEVVAKHVTEGYMLAFGTMRTVAIAEAA
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mRNA from alignment at M-pyrifera_M_contig68700:2..1132-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig68700.16521.1 ID=mRNA_M-pyrifera_M_contig68700.16521.1|Name=mRNA_M-pyrifera_M_contig68700.16521.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1131bp|location=Sequence derived from alignment at M-pyrifera_M_contig68700:2..1132- (Macrocystis pyrifera P11B4 male)
ATGCCCTTTCGCATCTTATGTGACCGATTCGAGCGTGCAGCAGCATGCAG TGGAGCAAGGTCGCAATGGAAGCGCTTTTCCCATGTTTGGCCACCCCAAA ACCAAAGGTTATGGGAGAATGGAGACGACGTCTTCCCATACTTACGTCTC GTGCTTCCAGATATGGATGCAGAGCGCCGAGCATATGGAATTCGAGAAAA ACGTCTTCCTTCAGAGCTTGGAGCAGCCCTGATGCTACCTGCGTCCAGCC CTCTCATGCACGCGCTTGAACGGTGGAAAACTGGTGAGTCAGAGTTGTGT GTACGTGGTGACCTACCTTCTACAGTCCAAAACGTCCTCACACGCCTTGG ACTCAAGTCTGGTCCTTGCACACTCACCATTCGTGACATCAATGCACGGT TGGATGAACTGGCACATATCCAAACAACGACAGTTCCTGGAGCCTACTAT GGAAAGACCACAACCGCGACCACATCTTCCTCCTCCTCCTCCTCCTCCTC TTCCTCCTCCTCTTCCTCCTCCTCCTCCTCGTCGCCAACAAAAGTAGTAA AGGTGGTTGGAAGGGAACGGCGTCAAGCATTGCTGCGAGAAATACTCTCC AAAGATCTCGCACCTCGTGAAGCTGCATGGTTCTTTCGAATCGTTCTGCG AGATTTGCGGATCGGAGTGAGTGGGGATGGATTTCTAAGACGACTCCACT CTGGTGCACTGGAACTTTTTCGCACGCAAGCGTCGCTTCGACAAGTTGCC ATGTCAGCAACCAAATTACTCGCAGGGGTCAAGGTCGCACTACGACCAGG ACAGCCTTGTGTGCCCATGTTGTGCGCAAAAGTGGTTGGAAAGACACCAG CTGCAACAGTGGTGAAAACTGCAGGAGATGATGATCTTTACTGTGAACCA AAGCTTGATGGTGAACGGCGACTCATTCACCTCACCAAAGATGGACGAGT CCACGCTTTCACGCGACACTCCAAACCATGCTCCAAAGAAGTTGACATCC TCAAAGATGCAGTCCGAGCTCTACCTTGCTCCGCAGTTGTTCTTGATGGG GAAGTAGTGGCAAAGCATGTCACAGAAGGATACATGTTGGCATTTGGAAC TATGCGAACTGTCGCTATCGCTGAAGCGGCA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig68700:2..1132-

>mRNA_M-pyrifera_M_contig68700.16521.1 ID=mRNA_M-pyrifera_M_contig68700.16521.1|Name=mRNA_M-pyrifera_M_contig68700.16521.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2022bp|location=Sequence derived from alignment at M-pyrifera_M_contig68700:2..1132- (Macrocystis pyrifera P11B4 male)
ATGCCCTTTCGCATCTTATGTGACCGATTCGAGCGTGCAGCAGCATGCAG
TGGAGCAAGGTCGCAATGGAAGCGCTTTTCCCATGTTTGGCCACCCCAAA
ACCAAAGGTTATGGGAGAATGGAGACGACGTCTTCCCATACTTACGTCTC
GTGCTTCCAGATATGGATGCAGAGCGCCGAGCATATGGAATTCGAGAAAA
ACGTCTTCCTTCAGAGCTTGGAGCAGCCCTGATGCTACCTGCGTCCAGCC
CTCTCATGCACGCGCTTGAACGGTGGAAAACTGGTGAGTCAGAGTTGTGT
GTACGTGGTGACCTACCTTCTACAGTCCAAAACGTCCTCACACGCCTTGG
ACTCAAGTCTGGTCCTTGCACACTCACCATTCGTGACATCAATGCACGGT
TGGATGAACTGGCACATATCCAAACAACGACAATGCCCTTTCGCATCTTA
TGTGACCGATTCGAGCGTGCAGCAGCATGCAGTGGAGCAAGGTCGCAATG
GAAGCGCTTTTCCCATGTTTGGCCACCCCAAAACCAAAGGTTATGGGAGA
ATGGAGACGACGTCTTCCCATACTTACGTCTCGTGCTTCCAGATATGGAT
GCAGAGCGCCGAGCATATGGAATTCGAGAAAAACGTCTTCCTTCAGAGCT
TGGAGCAGCCCTGATGCTACCTGCGTCCAGCCCTCTCATGCACGCGCTTG
AACGGTGGAAAACTGGTGAGTCAGAGTTGTGTGTACGTGGTGACCTACCT
TCTACAGTCCAAAACGTCCTCACACGCCTTGGACTCAAGTCTGGTCCTTG
CACACTCACCATTCGTGACATCAATGCACGGTTGGATGAACTGGCACATA
TCCAAACAACGACAGTGGTTGGAAGGGAACGGCGTCAAGCATTGCTGCGA
GAAATACTCTCCAAAGATCTCGCACCTCGTGAAGCTGCATGGTTCTTTCG
AATCGTTCTGCGAGATTTGCGGATCGGAGTGAGTGGGGATGGATTTCTAA
GACGACTCCACTCTGGTGCACTGGAACTTTTTCGCACGCAAGCGTCGCTT
CGACAAGTTGCCATGTCAGCAACCAAATTACTCGCAGGGGTCAAGGTCGC
ACTACGACCAGGACAGCCTTGTGTGCCCATGTTGTGCGCAAAAGTGGTTG
GAAAGACACCAGCTGCAACAGTGGTGAAAACTGCAGGAGATGATGATCTT
TACTGTGAACCAAAGCTTGATGGTGAACGGCGACTCATTCACCTCACCAA
AGATGGACGAGTCCACGCTTTCACGCGACACTCCAAACCATGCTCCAAAG
AAGTTGACATCCTCAAAGATGCAGTCCGAGCTCTACCTTGCTCCGCAGTT
GTTCTTGATGGGGAAGTAGTGGCAAAGCATGTCACAGAAGGATACATGTT
GGCATTTGGAACTATGCGAACTGTCGCTATCGCTGAAGCGGCAGTGGTTG
GAAGGGAACGGCGTCAAGCATTGCTGCGAGAAATACTCTCCAAAGATCTC
GCACCTCGTGAAGCTGCATGGTTCTTTCGAATCGTTCTGCGAGATTTGCG
GATCGGAGTGAGTGGGGATGGATTTCTAAGACGACTCCACTCTGGTGCAC
TGGAACTTTTTCGCACGCAAGCGTCGCTTCGACAAGTTGCCATGTCAGCA
ACCAAATTACTCGCAGGGGTCAAGGTCGCACTACGACCAGGACAGCCTTG
TGTGCCCATGTTGTGCGCAAAAGTGGTTGGAAAGACACCAGCTGCAACAG
TGGTGAAAACTGCAGGAGATGATGATCTTTACTGTGAACCAAAGCTTGAT
GGTGAACGGCGACTCATTCACCTCACCAAAGATGGACGAGTCCACGCTTT
CACGCGACACTCCAAACCATGCTCCAAAGAAGTTGACATCCTCAAAGATG
CAGTCCGAGCTCTACCTTGCTCCGCAGTTGTTCTTGATGGGGAAGTAGTG
GCAAAGCATGTCACAGAAGGATACATGTTGGCATTTGGAACTATGCGAAC
TGTCGCTATCGCTGAAGCGGCA
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