mRNA_M-pyrifera_M_contig68661.16509.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig68661.16509.1
Unique NamemRNA_M-pyrifera_M_contig68661.16509.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig68661.16509.1 vs. uniprot
Match: A0A813ANL3_9DINO (p2xE protein n=5 Tax=Sar TaxID=2698737 RepID=A0A813ANL3_9DINO)

HSP 1 Score: 189 bits (480), Expect = 5.850e-53
Identity = 109/273 (39.93%), Postives = 164/273 (60.07%), Query Frame = 1
Query:    4 CRWLDQYGAVYPPIETGATFLSTRIKEVNQSVNFPYCKHSISPHCKWDDVGQFTYFVAQPEMFTIWIDHTMAVPDIGLTPDTFSRAAGQMEGKLLGPDGSTEVDPCEPYKKLKLDCPSYVH-----VGETGQNGQDIVPLQSLLDAAGV-DMDQDANLATTNTSETVRFAGIVLVLTITYNNMDNFDPFIITYTYSVSPILKAEYKGEEIDPQPGVSTEKRTLYDRHGVRIVVRQAGTVGLFSPSTMLIQAVTSLGLLAVAGSIVNFLAFNVL 804
            CR+LD +  VYPP+E  A F+STR+ +  Q +  P C     P C+++     TYFV   E+ T+ IDHTM+VP +      FS+++  M G++   +G TEV+PC+ Y +    CP++ +     +    Q+  DI+ L +L  AA V  +D+ A      TSET R+AGIVL++T+ Y+N  ++D   + Y  +   +  A++K EEI+P PG+    R + DRHGVRIV+ Q G +G F+ S +LI  VTS+GLLAV+ SIV+ +A NVL
Sbjct:  102 CRYLDTFDTVYPPVEAQALFISTRVNDTLQQLP-PNCTDLPRPSCRYETTSVETYFVPGTELVTLLIDHTMSVPSLD-----FSKSSLDMTGRIEYTNG-TEVNPCDAYTRRGYLCPTFANGAGFEITFGTQDAADIIALDTLFQAADVRSLDERAGNIGKFTSETFRYAGIVLIVTVNYDNYFSYDENKVQYILTSKLVPDADFKAEEINPGPGIDETTRRIIDRHGVRIVITQGGKIGRFAVSQLLIVLVTSMGLLAVSSSIVDGVAMNVL 367          
BLAST of mRNA_M-pyrifera_M_contig68661.16509.1 vs. uniprot
Match: D3BBU9_POLPP (Putative purinergic receptor n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BBU9_POLPP)

HSP 1 Score: 115 bits (287), Expect = 2.360e-26
Identity = 83/267 (31.09%), Postives = 136/267 (50.94%), Query Frame = 1
Query:    4 CRWLDQYGAVYPPIETGATFLSTRIKEVNQSVNFPYCKHSISPHCKWDDVGQFTYFVAQPEMFTIWIDHTMAVPDIGLTPDTFSRAAGQMEGKLLGPDGSTEVDPCEPYKKLKLDCPSYVHVGETGQNGQDIVPLQSLLDAAGVDMDQDANLATTNTSETVRFAGIVLVLTITYNNMDNFDPFIITYTYSVSPILKAEYKGEEIDPQPGVSTEKRTLYDRHGVRIVVRQAGTVGLFSPSTMLIQAVTSLGLLAVAGSIVNFLAFNVL 804
            C++ D+  A+YP     + F++TR     Q      C  +  P C +        +VA  + FTI IDHT++ P++ +  +     A ++ G+LLG +G     P           PS V V    +N  DI+ L + L+AAG+D     +L+  N S ++R  G+++++ ITY+NM  +D     YTY    I   ++K   I+P        R ++DRHGV+++  Q GT+G F   TML+  V+ +GL+ V+  IV+ LA  +L
Sbjct:   80 CQYWDEVLALYPSSSDTSMFITTRATTEQQDT-LNNCNLT-EPSCVYVTSNVVDLYVADIDNFTIMIDHTVSAPNLDIEYN-----ARELNGRLLGSNGKVWTPPP----------PSVVGV----KNKYDILTLDACLEAAGIDSLDQPSLS--NASRSMRNDGVLILVFITYSNMYTYDTSNFRYTYEFKVIKDTKFKA--IEPIFTTGVNNRFVFDRHGVKLIFIQTGTIGKFDFQTMLLTFVSGIGLVTVSTVIVDVLAVKLL 321          
BLAST of mRNA_M-pyrifera_M_contig68661.16509.1 vs. uniprot
Match: D3BDI2_POLPP (Putative purinergic receptor n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BDI2_POLPP)

HSP 1 Score: 112 bits (279), Expect = 3.770e-25
Identity = 85/268 (31.72%), Postives = 137/268 (51.12%), Query Frame = 1
Query:    4 CRWLDQYGAVYPPIETGATFLSTRIKEVNQSVNFPYCKHSISPHCKWDDVGQFTYFVAQPEMFTIWIDHTMAVPDIGLTPDTFSRAAGQMEGKLLGPDGSTEVDPCEPYKKLKLDCPSYVHVGETGQNGQ-DIVPLQSLLDAAGVDMDQDANLATTNTSETVRFAGIVLVLTITYNNMDNFDPFIITYTYSVSPILKAEYKGEEIDPQPGVSTEKRTLYDRHGVRIVVRQAGTVGLFSPSTMLIQAVTSLGLLAVAGSIVNFLAFNVL 804
            C + D+   VYPP    + F+STR+    Q    P C  + S +C ++       F+A  + FTI +DHT++ P   +  +     A ++ G+LL  DG     P           PS V     GQ G  DI+ L ++L+AAG+D   D +L+  N+S ++R  GI+L++ I Y+N+  ++     YTY    I   ++K   ++P  G   + R + +RHGV+++  Q G +G F   T+L+  V+ LGLLAVA  IV  +   +L
Sbjct:   92 CAYWDEELIVYPPTADYSMFVSTRVTTEVQDT--PNCDLT-SLNCTFESFNTTNLFIADIDNFTILLDHTLSAPSHDIQFN-----ARELPGQLLDTDGKPWTPPP----------PSVV-----GQKGLFDILTLDTILEAAGIDSLDDMSLS--NSSRSIRDDGIILLVFIDYSNVYTYNTNNYRYTYRFKAIKDTKFK--IMEPIYGSDLQHRFVLNRHGVKLIFLQTGQIGAFDFQTLLLNFVSGLGLLAVATFIVENIVMKIL 332          
BLAST of mRNA_M-pyrifera_M_contig68661.16509.1 vs. uniprot
Match: UPI0006451F54 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006451F54)

HSP 1 Score: 111 bits (278), Expect = 6.050e-25
Identity = 81/268 (30.22%), Postives = 139/268 (51.87%), Query Frame = 1
Query:    4 CRWLDQYGAVYPPIETGATFLSTRIK-EVNQSVNFPYCKHSISPHCKWDDVGQFTYFVAQPEMFTIWIDHTMAVPDIGLTPDTFSRAAGQMEGKLLGPDGSTEVDPCEPYKKLKLDCPSYVHVGETGQNGQDIVPLQSLLDAAGVDMDQDANLATTNTSETVRFAGIVLVLTITYNNMDNFDPFIITYTYSVSPILKAEYKGEEIDPQPGVSTEKRTLYDRHGVRIVVRQAGTVGLFSPSTMLIQAVTSLGLLAVAGSIVNFLAFNVL 804
            C + D+   +YP     + F+STR++ E+ ++VN   C+ + SP C +    Q  +++   E FTI +DHT++ P++G+  +     A Q+ G+LL   G     P           P+ V V    Q+  DI+ + + L AAG+      +L+  N S ++R  G++L++ ITY+N   ++     YTY    I   ++K EE  P        R ++DRHGV+++  Q G++G F   TML+  V+ +GL+ V+   V+ LA  +L
Sbjct:   93 CEYWDESLVLYPSTSDTSMFISTRVESEIQKTVN--NCQFT-SPTCTYATYNQSLFYIPDIENFTIMLDHTVSAPNLGIQYN-----ARQLPGRLLNSSGHVWTPPA----------PNVVGV----QSQYDIMTVGTCLAAAGIYNLDGPSLS--NASRSMRDDGVILLVFITYSNTYTYNTNNFRYTYQFKVIKDTKFKAEE--PIFTTDVNNRYVFDRHGVKMLFIQTGSIGKFDFQTMLLTFVSGIGLVTVSTIFVDILAVRLL 334          
BLAST of mRNA_M-pyrifera_M_contig68661.16509.1 vs. uniprot
Match: A0A482RJS8_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RJS8_9ARCH)

HSP 1 Score: 99.4 bits (246), Expect = 4.380e-21
Identity = 63/176 (35.80%), Postives = 95/176 (53.98%), Query Frame = 1
Query:  310 VDPCEPYKKLKLDCPSYVHVGETGQNGQDIVPLQSLLDAAGV-DMDQDANLATTNTSETVRFAGIVLVLTITYNNM-----------DNFDPFIITYTYSVSPILKAEYKG-EEIDPQPGVSTEKRTLYDRHGVRIVVRQAGTVGLFSPSTMLIQAVTSLGLLAVAGSIVNFLAFN 798
            +DPC+ Y   +  CPSY+  G  G+    I+ L+SLL AAGV  +D  A       SET+R+AG+V+V+ + Y N             +F+P  + + Y V  + + +YK    I P        R +Y++HGVRI++ Q G +G F    +LI  + SLGLL+VA  I +F+AF 
Sbjct:    2 LDPCDAYSNFEAGCPSYITEGGDGK--ATILSLRSLLHAAGVRTLDAPAGSIPPLDSETLRYAGLVMVIEVQYTNYYTASGNVRHGTGSFNPLHVDFMYRVRVVPEQDYKSLRVITPSSEAFDSTRNVYNQHGVRIILTQNGRIGTFDFQALLINLMVSLGLLSVAIIITDFVAFK 175          
BLAST of mRNA_M-pyrifera_M_contig68661.16509.1 vs. uniprot
Match: A0A812URW3_9DINO (p2xE protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812URW3_9DINO)

HSP 1 Score: 97.4 bits (241), Expect = 2.970e-20
Identity = 59/129 (45.74%), Postives = 81/129 (62.79%), Query Frame = 1
Query:  424 AAGVDMDQDANL--ATTNTSETVRFAGIVLVLTITYNNMDNFDPFIITYTYSVSPILKAEYKGEEIDPQPGVSTEKRTLYDRHGVRIVVRQAGTVGLFSPSTMLIQAVTSLGLLAVAGSIVNFLAFNVL 804
            AAGV    DANL  A ++  E  R +G V V+TI Y+N   + P +I Y YSVS +   E+K  E  P PG S   R + +RHG+R +  Q+G +G+FS   +L+Q V+S GL+AV+ +IV FLAFNVL
Sbjct:    3 AAGV-RSLDANLTDAGSHAGEARRNSGSVFVVTINYDNYVTYFPSVIKYAYSVSAVKATEFKALETLPAPGASKTWRHIINRHGLRFIFLQSGRLGVFSLPALLVQLVSSFGLIAVSSAIVQFLAFNVL 130          
BLAST of mRNA_M-pyrifera_M_contig68661.16509.1 vs. uniprot
Match: A0A397VZR8_9GLOM (Uncharacterized protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397VZR8_9GLOM)

HSP 1 Score: 86.3 bits (212), Expect = 9.420e-16
Identity = 82/279 (29.39%), Postives = 125/279 (44.80%), Query Frame = 1
Query:    1 PCRWLDQYGAVYPPIETGATFLSTRIKEVNQSVNFPYCKH----SISPHCKWDDVGQFTY-----FVAQPEMFTIWIDHTMAVPDIGLTPDTFSRAAGQMEGKLLGPDGSTEVDPCEPYKKLKLDCPSYVHVGETGQNGQDIVPLQSLLDAAGVDMDQDANLATTN--TSETVRFAGIVLVLTITYNNMDNFDPFIITYTYSVSPILKAEYKGEEIDPQPGVSTEKRTLYDRHGVRIVVRQAGTVGLFSPSTMLIQAVTSLGLLAVAGSIVNFLAFNVL 804
            PC +      +YP    G  F +TR   +N   N P C +    S    C +             ++A  E +TI ++H++     G       R+ G M+G+L+  +G T        +KL  D      + +  +   DI  +Q +L AAG ++D  +     N  T ET R +GIV+V+ I Y N+  F    I+Y Y    I   EYK   ++     +    TL DRHG+R+V +Q GT+G F    +L   V SL L  VA ++V  +  NVL
Sbjct:   81 PCTFWGANEILYPSDGAGVAFFTTRTSAINYP-NQPGCNNLRVSSPQDPCFFQPTNNNVTILPKSYIADIEDYTIMVEHSVR----GKATSIAIRS-GLMDGELVSFNGKT-------IRKLTND----TRMAKNPRADGDIFTVQEILTAAGANLDSPSTAPGANKATGETYRSSGIVIVIVIEYKNVP-FKKDTISYKYLPQIIDGNEYK--VVENIYNTTDGSFTLIDRHGIRLVFQQHGTIGEFQFIALLTGLVASLALFKVAETLVELVMLNVL 339          
BLAST of mRNA_M-pyrifera_M_contig68661.16509.1 vs. uniprot
Match: A0A482R5I4_9EURY (Uncharacterized protein n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A482R5I4_9EURY)

HSP 1 Score: 82.4 bits (202), Expect = 6.180e-15
Identity = 42/79 (53.16%), Postives = 53/79 (67.09%), Query Frame = 1
Query:  562 YTYSVSPILKAEYKGEEIDPQPGVSTEKRTLYDRHGVRIVVRQAGTVGLFSPSTMLIQAVTSLGLLAVAGSIVNFLAFN 798
            YTY V  +  AE+K E+I P+PG     RT+ DRHG+RI+V+QAG VG     T LI   +SLGLLAVA ++VN  AFN
Sbjct:    2 YTYRVQSVSDAEFKYEQILPEPGSGAVNRTILDRHGLRILVKQAGNVGRIDVPTFLIAVTSSLGLLAVAATLVNCFAFN 80          
BLAST of mRNA_M-pyrifera_M_contig68661.16509.1 vs. uniprot
Match: UPI00077A0CFA (P2X receptor E-like n=2 Tax=Acropora TaxID=6127 RepID=UPI00077A0CFA)

HSP 1 Score: 81.6 bits (200), Expect = 4.240e-14
Identity = 75/281 (26.69%), Postives = 129/281 (45.91%), Query Frame = 1
Query:    1 PCRWLDQYGAVYPPIETGATFLSTRIKEVNQSVNFPYCKHSISPHCKWDDVGQFTYFVAQPEMFTIWIDHTMAVPDIGLTPDTFSRAAGQMEGKLLGPDGSTEVDPCEPYKKLKLDCPSYVHVGETGQNGQDIVPLQSLLDAAGVDMDQDANLATTNTSETVRFAGIVLVLTITYNNMDN--FDPFIITYTYSVSPILKAEYKGEEI-----------DPQPGVSTEKRTLYDRHGVRIVVRQAGTVGLFSPSTMLIQAVTSLGLLAVAGSIVNFLAFNVL 804
            PC++LD     +P +E+    L+T  K+  Q  N  +   S+S   +++ + +  YF A PE   + I+H +    +       + +  +M+G L+G DG          + L  D     ++   G+   D   +Q +L+AAGV    + + A     +  R  GIVL +TI Y N D+       ITY+Y V  I  A+Y+  ++           D       E R    R+G++I   Q+G +G FS   +L++ V+ +GLL +  +IV+ L   +L
Sbjct:   96 PCQFLDAQELSWP-VESHTISLTTFAKDRWQMRNTSFS--SMSNPTQFETIKESLYFTAGPESMLVKIEHAVLATKLFSGGTDLAASQRKMKGYLIGHDGKV-------LRSLSAD----ENMNPRGR--ADRFTIQEILNAAGVASLDEVSDALNAKGKPFRRHGIVLHVTIHYQNTDSTVLGTGDITYSYHVRRIPYADYRVNQLMPVRSEREFAADSSHRTHQENRLFRKRYGIKIEFHQSGRLGHFSLPALLMRLVSGVGLLTLTATIVDILTLYIL 360          
BLAST of mRNA_M-pyrifera_M_contig68661.16509.1 vs. uniprot
Match: A0A8H3ZZ89_GIGMA (P2X purinoceptor 4 n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H3ZZ89_GIGMA)

HSP 1 Score: 80.1 bits (196), Expect = 1.870e-13
Identity = 81/282 (28.72%), Postives = 121/282 (42.91%), Query Frame = 1
Query:    1 PCRWLDQYGAVYPPIETGATFLSTRIKEVNQSVNFPYCKHSISP----HCKWDDVGQF--------TYFVAQPEMFTIWIDHTMAVPDIGLTPDTFSRAAGQMEGKLLGPDGSTEVDPCEPYKKLKLDCPSYVHVGETGQNGQDIVPLQSLLDAAGVDMDQDANLATTNTS--ETVRFAGIVLVLTITYNNMDNFDPFIITYTYSVSPILKAEYKGEEIDPQPGVSTEKRTLYDRHGVRIVVRQAGTVGLFSPSTMLIQAVTSLGLLAVAGSIVNFLAFNVL 804
            PC +  +    YP    G  F +TR+   N  V  P C  S +      C +D             T F+   E +T+ I+H++     G       R  G ++G L+  DG           KL  +  +   +G   +   DI  ++ +LDAAG ++D  +     N +  E  R +GIV+V+ I Y N        ITY Y    I   EYK   ++    V+    TL +RHG+R V +Q GT+G F   T+L   V  L L  +A ++V FL   VL
Sbjct:   82 PCVFWSEDAIRYPDDGAGVAFFTTRVSSTNY-VPPPGCDFSKASLPTDQCFFDPNSPTIRRNTLVPTSFIGDIEDYTMMIEHSVR----GKITSVAIRN-GLLDGALMSHDG-----------KLIRNFNNATRMGNNSRADGDIFTVKEMLDAAGANLDGPSTAPGANKTIGEINRTSGIVVVIVIEYKNRHQD----ITYKYIPQVIEGNEYKA--VERITNVTDGSVTLVNRHGIRFVFQQHGTIGQFDFLTLLTNIVGGLALFKLAEALVEFLMLMVL 340          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68661.16509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A813ANL3_9DINO5.850e-5339.93p2xE protein n=5 Tax=Sar TaxID=2698737 RepID=A0A81... [more]
D3BBU9_POLPP2.360e-2631.09Putative purinergic receptor n=1 Tax=Polysphondyli... [more]
D3BDI2_POLPP3.770e-2531.72Putative purinergic receptor n=1 Tax=Polysphondyli... [more]
UPI0006451F546.050e-2530.22hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A482RJS8_9ARCH4.380e-2135.80Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A812URW3_9DINO2.970e-2045.74p2xE protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A397VZR8_9GLOM9.420e-1629.39Uncharacterized protein n=1 Tax=Gigaspora rosea Ta... [more]
A0A482R5I4_9EURY6.180e-1553.16Uncharacterized protein n=1 Tax=Methanosarcinales ... [more]
UPI00077A0CFA4.240e-1426.69P2X receptor E-like n=2 Tax=Acropora TaxID=6127 Re... [more]
A0A8H3ZZ89_GIGMA1.870e-1328.72P2X purinoceptor 4 n=1 Tax=Gigaspora margarita Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig68661contigM-pyrifera_M_contig68661:4..807 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score146.4
Seed ortholog evalue2e-32
Seed eggNOG ortholog5786.XP_003288430.1
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000331,GO:0001614,GO:0003674,GO:0004888,GO:0005215,GO:0005216,GO:0005217,GO:0005261,GO:0005262,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0006810,GO:0006811,GO:0006812,GO:0006816,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0006970,GO:0006971,GO:0007154,GO:0007165,GO:0007166,GO:0007204,GO:0008144,GO:0008150,GO:0008324,GO:0009628,GO:0009966,GO:0009987,GO:0010646,GO:0015075,GO:0015085,GO:0015267,GO:0015276,GO:0015278,GO:0015318,GO:0016020,GO:0016021,GO:0016502,GO:0017076,GO:0019722,GO:0019725,GO:0019932,GO:0022803,GO:0022834,GO:0022836,GO:0022838,GO:0022839,GO:0022857,GO:0022890,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030554,GO:0031090,GO:0031164,GO:0031224,GO:0031410,GO:0031982,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0033554,GO:0034220,GO:0035381,GO:0035556,GO:0035586,GO:0035587,GO:0035590,GO:0035639,GO:0036094,GO:0038023,GO:0042592,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046873,GO:0048519,GO:0048523,GO:0048583,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050848,GO:0050896,GO:0051179,GO:0051209,GO:0051234,GO:0051282,GO:0051283,GO:0051480,GO:0051641,GO:0051649,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055085,GO:0060089,GO:0060401,GO:0060402,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0071214,GO:0071470,GO:0071476,GO:0072503,GO:0072507,GO:0072511,GO:0097159,GO:0097367,GO:0097553,GO:0097708,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098805,GO:0099094,GO:0099604,GO:0104004,GO:1901265,GO:1901363,GO:1902531
EggNOG free text desc.ATP P2X receptor
EggNOG OGs2D8T7@1,2TBEY@2759,3XFX6@554915
COG Functional cat.P
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
Exons1
Model size804
Cds size804
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816578.343702-CDS-M-pyrifera_M_contig68661:3..8071622816578.343702-CDS-M-pyrifera_M_contig68661:3..807Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68661 4..807 -
1692278057.62642-CDS-M-pyrifera_M_contig68661:3..8071692278057.62642-CDS-M-pyrifera_M_contig68661:3..807Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig68661 4..807 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig68661.16509.1prot_M-pyrifera_M_contig68661.16509.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig68661 4..807 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig68661.16509.1

>prot_M-pyrifera_M_contig68661.16509.1 ID=prot_M-pyrifera_M_contig68661.16509.1|Name=mRNA_M-pyrifera_M_contig68661.16509.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=268bp
PCRWLDQYGAVYPPIETGATFLSTRIKEVNQSVNFPYCKHSISPHCKWDD
VGQFTYFVAQPEMFTIWIDHTMAVPDIGLTPDTFSRAAGQMEGKLLGPDG
STEVDPCEPYKKLKLDCPSYVHVGETGQNGQDIVPLQSLLDAAGVDMDQD
ANLATTNTSETVRFAGIVLVLTITYNNMDNFDPFIITYTYSVSPILKAEY
KGEEIDPQPGVSTEKRTLYDRHGVRIVVRQAGTVGLFSPSTMLIQAVTSL
GLLAVAGSIVNFLAFNVL
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mRNA from alignment at M-pyrifera_M_contig68661:4..807-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig68661.16509.1 ID=mRNA_M-pyrifera_M_contig68661.16509.1|Name=mRNA_M-pyrifera_M_contig68661.16509.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=804bp|location=Sequence derived from alignment at M-pyrifera_M_contig68661:4..807- (Macrocystis pyrifera P11B4 male)
CCTTGCCGTTGGCTGGACCAGTACGGCGCGGTGTACCCTCCGATCGAGAC TGGGGCAACGTTTTTGTCGACCCGGATCAAGGAGGTGAACCAGAGCGTGA ACTTTCCGTACTGCAAGCACAGCATCAGCCCGCACTGCAAGTGGGATGAC GTGGGCCAGTTCACTTACTTTGTGGCGCAGCCCGAGATGTTCACGATTTG GATCGACCACACGATGGCGGTGCCAGACATTGGGTTGACCCCCGACACTT TCTCCCGTGCCGCGGGTCAGATGGAAGGGAAGCTGCTTGGTCCCGATGGC AGCACTGAGGTGGATCCCTGCGAGCCGTATAAGAAGCTCAAGCTGGACTG CCCCAGCTATGTGCACGTCGGTGAGACTGGCCAGAACGGGCAGGACATTG TTCCGCTGCAGAGCCTGCTGGATGCGGCTGGCGTTGACATGGACCAGGAC GCGAATCTGGCGACGACCAACACGAGCGAGACGGTTCGTTTCGCGGGCAT CGTGCTGGTGCTGACCATCACGTACAACAACATGGACAACTTCGACCCTT TCATCATCACCTACACTTACTCGGTGTCCCCGATTCTCAAGGCCGAGTAC AAGGGCGAGGAAATCGACCCACAGCCCGGAGTGTCCACAGAAAAGCGCAC GCTCTACGATCGACACGGAGTGCGTATCGTGGTGCGCCAAGCAGGCACTG TGGGACTGTTCTCACCCTCGACAATGCTCATCCAGGCCGTGACCTCGCTG GGTCTGCTTGCCGTAGCGGGCTCCATCGTGAACTTCCTGGCCTTTAACGT GCTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig68661:4..807-

>mRNA_M-pyrifera_M_contig68661.16509.1 ID=mRNA_M-pyrifera_M_contig68661.16509.1|Name=mRNA_M-pyrifera_M_contig68661.16509.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1608bp|location=Sequence derived from alignment at M-pyrifera_M_contig68661:4..807- (Macrocystis pyrifera P11B4 male)
CCTTGCCGTTGGCTGGACCAGTACGGCGCGGTGTACCCTCCGATCGAGAC
TGGGGCAACGTTTTTGTCGACCCGGATCAAGGAGGTGAACCAGAGCGTGA
ACTTTCCGTACTGCAAGCACAGCATCAGCCCGCACTGCAAGTGGGATGAC
GTGGGCCAGTTCACTTACTTTGTGGCGCAGCCCGAGATGTTCACGATTTG
GATCGACCACACGATGGCGGTGCCAGACATTGGGTTGACCCCCGACACTT
TCTCCCGTGCCGCGGGTCAGATGGAAGGGAAGCTGCTTGGTCCCGATGGC
AGCACTGAGGTGGATCCCTGCGAGCCGTATAAGAAGCTCAAGCTGGACTG
CCCCAGCTATGTGCACGTCGGTGAGACTGGCCAGAACGGGCAGGACATTG
TTCCGCTGCAGAGCCTGCTGGATGCGGCTGGCGTTGACATGGACCAGGAC
GCGAATCTGGCGACGACCAACACGAGCGAGACGGTTCGTTTCGCGGGCAT
CGTGCTGGTGCTGACCATCACGTACAACAACATGGACAACTTCGACCCTT
TCATCATCACCTACACTTACTCGGTGTCCCCGATTCTCAAGGCCGAGTAC
AAGGGCGAGGAAATCGACCCACAGCCCGGAGTGTCCACAGAAAAGCGCAC
GCTCTACGATCGACACGGAGTGCGTATCGTGGTGCGCCAAGCAGGCACTG
TGGGACTGTTCTCACCCTCGACAATGCTCATCCAGGCCGTGACCTCGCTG
GGTCTGCTTGCCGTAGCGGGCTCCATCGTGAACTTCCTGGCCTTTAACGT
GCTCCCTTGCCGTTGGCTGGACCAGTACGGCGCGGTGTACCCTCCGATCG
AGACTGGGGCAACGTTTTTGTCGACCCGGATCAAGGAGGTGAACCAGAGC
GTGAACTTTCCGTACTGCAAGCACAGCATCAGCCCGCACTGCAAGTGGGA
TGACGTGGGCCAGTTCACTTACTTTGTGGCGCAGCCCGAGATGTTCACGA
TTTGGATCGACCACACGATGGCGGTGCCAGACATTGGGTTGACCCCCGAC
ACTTTCTCCCGTGCCGCGGGTCAGATGGAAGGGAAGCTGCTTGGTCCCGA
TGGCAGCACTGAGGTGGATCCCTGCGAGCCGTATAAGAAGCTCAAGCTGG
ACTGCCCCAGCTATGTGCACGTCGGTGAGACTGGCCAGAACGGGCAGGAC
ATTGTTCCGCTGCAGAGCCTGCTGGATGCGGCTGGCGTTGACATGGACCA
GGACGCGAATCTGGCGACGACCAACACGAGCGAGACGGTTCGTTTCGCGG
GCATCGTGCTGGTGCTGACCATCACGTACAACAACATGGACAACTTCGAC
CCTTTCATCATCACCTACACTTACTCGGTGTCCCCGATTCTCAAGGCCGA
GTACAAGGGCGAGGAAATCGACCCACAGCCCGGAGTGTCCACAGAAAAGC
GCACGCTCTACGATCGACACGGAGTGCGTATCGTGGTGCGCCAAGCAGGC
ACTGTGGGACTGTTCTCACCCTCGACAATGCTCATCCAGGCCGTGACCTC
GCTGGGTCTGCTTGCCGTAGCGGGCTCCATCGTGAACTTCCTGGCCTTTA
ACGTGCTC
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