mRNA_M-pyrifera_M_contig68611.16504.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68611.16504.1 vs. uniprot
Match: A0A6H5K346_9PHAE (GB1/RHD3-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K346_9PHAE) HSP 1 Score: 164 bits (415), Expect = 2.410e-45 Identity = 87/112 (77.68%), Postives = 95/112 (84.82%), Query Frame = 1
Query: 1 NHRSDDDKSAAWMTADGPSLREGNRN-VGASWGDGEG--EEGGEKSALRSFAWRGGVERMTTGIWVWSEPFIRRTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLVS 327
N S+DD S AWMTADGPSLREGNRN V G +G EE GE S+LRSF WRGGVERMTTGIW+WSEPF+RR EGGK+VAVL+VDTQGMFDNETSMGLTACIFAVSTL+S
Sbjct: 79 NSGSEDDTSEAWMTADGPSLREGNRNSVKPVGGGAQGVQEEEGEGSSLRSFEWRGGVERMTTGIWIWSEPFVRRMEGGKEVAVLVVDTQGMFDNETSMGLTACIFAVSTLLS 190
BLAST of mRNA_M-pyrifera_M_contig68611.16504.1 vs. uniprot
Match: A0A836CGS0_9STRA (Anti-viral guanylate-binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGS0_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.260e-29 Identity = 63/98 (64.29%), Postives = 72/98 (73.47%), Query Frame = 1
Query: 34 WMTADGPSLREGNRNVGASWGDGEGEEGGEKSALRSFAWRGGVERMTTGIWVWSEPFIRRTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLVS 327
W+ DG +LREGN N+G G ++ S L SF WRGG RMTTGIW+WSEPF RR GG+ VAVLLVDTQGMFDNETSMGLTA IF +STL+S
Sbjct: 80 WIKRDGEALREGNANLGVGQVTGGLQDPAGDSPL-SFEWRGGQTRMTTGIWMWSEPFFRRAIGGETVAVLLVDTQGMFDNETSMGLTASIFGLSTLIS 176
BLAST of mRNA_M-pyrifera_M_contig68611.16504.1 vs. uniprot
Match: A0A7S3XHU9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XHU9_HETAK) HSP 1 Score: 111 bits (277), Expect = 5.960e-29 Identity = 60/108 (55.56%), Postives = 73/108 (67.59%), Query Frame = 1
Query: 13 DDDKSAAWMTADGPSLREGNRNVGASWGDGEGEEGGEKSALR---SFAWRGGVERMTTGIWVWSEPFIRRTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLVS 327
D++ S WM A+G + EGN N+ + E E L+ SF W+GG ER TTGIW+WSEPF R G+K A+LLVDTQGMFDNETSMGLTACIF +STL+S
Sbjct: 16 DEETSEEWMKAEGDIMDEGNFNLTQARDAVETVEEFVLPELKPSLSFGWKGGHERQTTGIWMWSEPFFRTVANGEKAAILLVDTQGMFDNETSMGLTACIFGLSTLIS 123
BLAST of mRNA_M-pyrifera_M_contig68611.16504.1 vs. uniprot
Match: A0A4D9DBZ0_9STRA (GB1/RHD3-type G domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBZ0_9STRA) HSP 1 Score: 111 bits (278), Expect = 2.030e-26 Identity = 62/103 (60.19%), Postives = 70/103 (67.96%), Query Frame = 1
Query: 19 DKSAAWMTADGPSLREGNRNVGASWGDGEGEEGGEKSALRSFAWRGGVERMTTGIWVWSEPFIRRTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLVS 327
D S WMTA G LREGN N GD G + SF WR G ER TTGIW+WSE F+RR G++VAVLL+DTQGMFDNETSM LTACIF +STL+S
Sbjct: 89 DDSEDWMTAAGD-LREGNINEKVLAGD-----DGRNALESSFQWRAGKERTTTGIWMWSEAFVRRVANGEEVAVLLMDTQGMFDNETSMNLTACIFGLSTLLS 185
BLAST of mRNA_M-pyrifera_M_contig68611.16504.1 vs. uniprot
Match: A0A7R9YAI8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAI8_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.730e-25 Identity = 57/105 (54.29%), Postives = 68/105 (64.76%), Query Frame = 1
Query: 19 DKSAAWMTADGPSLREGNRNVGASWGDGEGEEGGEKSALRSFAWRGGVERMTTGIWVWSEPFIRRT--EGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLVS 327
D S WM G L+EGN N G + F WRGG ER TTGIW+WS+PF R++ EGG K+AVLLVDTQGMFDNET+M LT+CIF +STL+S
Sbjct: 74 DTSMDWMQFRGERLQEGNSNSGVD----------SPTVDFGFKWRGGTERQTTGIWMWSKPFFRQSAIEGGAKIAVLLVDTQGMFDNETTMALTSCIFGISTLIS 168
BLAST of mRNA_M-pyrifera_M_contig68611.16504.1 vs. uniprot
Match: A0A7S2D4G1_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D4G1_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.710e-22 Identity = 50/99 (50.51%), Postives = 68/99 (68.69%), Query Frame = 1
Query: 31 AWMTADGPSLREGNRNVGASWGDGEGEEGGEKSALRSFAWRGGVERMTTGIWVWSEPFIRRTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLVS 327
+W TA+G ++ EGN N ++ G + F WRGG ERMTTGIW++S PF + G+K+AVL+VDTQG+FDNET+M LT+CIF +STL+S
Sbjct: 70 SWQTAEGDNISEGNNNAASTAAKTVESNGAD---CHGFDWRGGHERMTTGIWMYSRPFFQDVFNGEKIAVLIVDTQGLFDNETTMLLTSCIFGLSTLMS 165
BLAST of mRNA_M-pyrifera_M_contig68611.16504.1 vs. uniprot
Match: A0A812SSV5_SYMMI (Atl protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812SSV5_SYMMI) HSP 1 Score: 95.5 bits (236), Expect = 4.050e-22 Identity = 52/109 (47.71%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 4 HRSDDDKSAAWMTADGPSLREGNRNVGASWGDGEGEEGGEKSALRSFAWRGGVERMTTGIWVWSEPFIRRTEG-GKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLVS 327
H + D+ S +WMT G ++ EGN + G E FAW GG ER TTG+W+WSEPF R+ +++A+LL+DTQGMFDNET+M LTA IF +STL+S
Sbjct: 40 HGNPDNISDSWMTMSGDNMDEGNVS---------GSEADISVKSSGFAWSGGQERQTTGMWMWSEPFFRKVASYPEEIAILLMDTQGMFDNETTMSLTARIFGLSTLIS 139
BLAST of mRNA_M-pyrifera_M_contig68611.16504.1 vs. uniprot
Match: A0A418CCP2_9STRA (GB1/RHD3-type G domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418CCP2_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 9.440e-21 Identity = 55/109 (50.46%), Postives = 69/109 (63.30%), Query Frame = 1
Query: 1 NHRSDDDKSAAWMTADGPSLREGNRNVGASWGDGEGEEGGEKSALRSFAWRGGVERMTTGIWVWSEPFIRRTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLVS 327
+H + D S W A GP L EGN N A+ GE G F+WR G +R TTGIW+WS+PFIR++ G+ +AV L+DTQGMFD+ETS LTA IF +STL S
Sbjct: 56 SHPAPDVTSREWALACGPQL-EGNSNFEAT----NGETG--------FSWRAGRKRNTTGIWMWSDPFIRQSATGEDIAVFLIDTQGMFDSETSQMLTASIFGLSTLFS 151
BLAST of mRNA_M-pyrifera_M_contig68611.16504.1 vs. uniprot
Match: F0Y0B8_AURAN (GB1/RHD3-type G domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0B8_AURAN) HSP 1 Score: 88.6 bits (218), Expect = 1.360e-20 Identity = 41/63 (65.08%), Postives = 52/63 (82.54%), Query Frame = 1
Query: 139 SFAWRGGVERMTTGIWVWSEPFIRRTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLVS 327
SF WRGG RMTTGI VWSEPF+ G+++AV+++DTQG+FDNET MGLT+CIF +STL+S
Sbjct: 40 SFEWRGGRVRMTTGITVWSEPFLVTGADGEQLAVVVLDTQGLFDNETPMGLTSCIFGLSTLMS 102
BLAST of mRNA_M-pyrifera_M_contig68611.16504.1 vs. uniprot
Match: K0TPQ6_THAOC (GB1/RHD3-type G domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TPQ6_THAOC) HSP 1 Score: 94.7 bits (234), Expect = 2.170e-20 Identity = 43/63 (68.25%), Postives = 54/63 (85.71%), Query Frame = 1
Query: 139 SFAWRGGVERMTTGIWVWSEPFIRRTEGGKKVAVLLVDTQGMFDNETSMGLTACIFAVSTLVS 327
SF WRGG ER TTGIW+WS+P+ + +GG+ VAVLLVDTQGMFD+ET++GLTA IF +STL+S
Sbjct: 559 SFDWRGGKERNTTGIWMWSDPYYLKRDGGEDVAVLLVDTQGMFDHETTVGLTAAIFGLSTLLS 621 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68611.16504.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68611.16504.1 >prot_M-pyrifera_M_contig68611.16504.1 ID=prot_M-pyrifera_M_contig68611.16504.1|Name=mRNA_M-pyrifera_M_contig68611.16504.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp NHRSDDDKSAAWMTADGPSLREGNRNVGASWGDGEGEEGGEKSALRSFAWback to top mRNA from alignment at M-pyrifera_M_contig68611:653..979+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68611.16504.1 ID=mRNA_M-pyrifera_M_contig68611.16504.1|Name=mRNA_M-pyrifera_M_contig68611.16504.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=327bp|location=Sequence derived from alignment at M-pyrifera_M_contig68611:653..979+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68611:653..979+ >mRNA_M-pyrifera_M_contig68611.16504.1 ID=mRNA_M-pyrifera_M_contig68611.16504.1|Name=mRNA_M-pyrifera_M_contig68611.16504.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig68611:653..979+ (Macrocystis pyrifera P11B4 male)back to top |