mRNA_M-pyrifera_M_contig68434.16472.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68434.16472.1 vs. uniprot
Match: A0A0A0L4H9_CUCSA (Uncharacterized protein n=4 Tax=Benincaseae TaxID=1003877 RepID=A0A0A0L4H9_CUCSA) HSP 1 Score: 86.7 bits (213), Expect = 1.500e-16 Identity = 62/186 (33.33%), Postives = 96/186 (51.61%), Query Frame = 1
Query: 40 LRLLEVSEELLSEIESGKSLMIKATADQDAVMCTGGCTYGMQFVETSNSVLLVPQALKPEDSGSTGDGEASXXXXXXXXXDVSEEKVAEIAGIVRGTYTLHEMPSRVWQLRELLEQTR-----DAETEKMSLRRQRLFAWEDLRRVVQVSDLELWQGLQELGAIRVGKHWRVLTPSFFREAMNAVL 582
L LLEV E+LL E+ + + I+ ++DAV CT TYG+++V TSNSVLL+P + G E D S+E VA + + G LHE+ R+ +L+ LL + + E E + +R++ W+DL VQ SD EL GLQ L A+ + +WR++ + + +L
Sbjct: 37 LVLLEVDEKLLEEVLHQR-VSIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPS---------GRSEYYTNELDSHQKDNSKE-VAPVIKVAPGIMELHEIAPRIDKLKLLLSEEHYSFADEWENEAVDKYEKRMYNWDDLINKVQASDNELKAGLQALSAVEIDGYWRIVDEKYMDSMLQMLL 211
BLAST of mRNA_M-pyrifera_M_contig68434.16472.1 vs. uniprot
Match: A0A6J1CZB2_MOMCH (sister chromatid cohesion protein DCC1 n=1 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1CZB2_MOMCH) HSP 1 Score: 85.1 bits (209), Expect = 5.350e-16 Identity = 60/189 (31.75%), Postives = 103/189 (54.50%), Query Frame = 1
Query: 40 LRLLEVSEELLSEIESGKSLMIKATADQDAVMCTGGCTYGMQFVETSNSVLLVPQALKPEDSGSTGDGEASXXXXXXXXXDVSEEKVAEIAGIVRGTYTLHEMPSRVWQLRELLEQ-----TRDAETEKMSLRRQRLFAWEDLRRVVQVSDLELWQGLQELGAIRVGKHWRVLTPSFFREAMNAVLEVV 591
L LLEV E+LL E+ + + I+ ++DAV CT TYG+++V TSNSVLL+P + + E + D S KVA + + G L E+ R+ +L+ LL + + E++++ ++L+ W+DL +Q SD E+ GLQEL A+ + +WRV+ + M+++L+++
Sbjct: 37 LVLLEVDEKLLEEVLHQR-VSIRGQPEEDAVFCTKSKTYGIKYVGTSNSVLLIPPSGRLEYYENDLDSHGKD----------SSRKVASVIKVAPGIMELVEIAPRIDKLKLLLSEKPYSLADEWESDEVDKYEKKLYNWDDLINKIQASDDEMKAGLQELSAVEIDGYWRVVDEKY----MDSILQML 210
BLAST of mRNA_M-pyrifera_M_contig68434.16472.1 vs. uniprot
Match: A0A1S2XMT3_CICAR (sister chromatid cohesion protein DCC1 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XMT3_CICAR) HSP 1 Score: 84.7 bits (208), Expect = 7.510e-16 Identity = 63/190 (33.16%), Postives = 102/190 (53.68%), Query Frame = 1
Query: 40 LRLLEVSEELLSEIESGKSLMIKATADQDAVMCTGGCTYGMQFVETSNSVLLVPQALKPE-DSGSTGDGEASXXXXXXXXXDVSEEKVAEIAGIVRGTYTLHEMPSRVWQLRELLEQT--RDAETEKMSLR-----RQRLFAWEDLRRVVQVSDLELWQGLQELGAIRVGKHWRVLTPSFFREAMNAVLE 585
L +LE+ ++LL ++ G+ ++++ ++DAV+CT TYGM+FV TSNSVLLVP + + E D+ D D E+ V + +V G L E+ R+ +L+ LL + R ET+ +L R L+ W DL +Q SD EL GLQ L A+ + +WR++ S+ + +L+
Sbjct: 39 LIILELDDKLLPDV-LGERVVLRGQPEEDAVLCTQSKTYGMKFVGTSNSVLLVPPSNQSECDNLQKNDSS-----------DYDEKVVTPVIKVVLGNMELIEVSPRLDKLKLLLSENVYRSDETDMENLEENQECRTGLYNWNDLINNIQASDEELRFGLQTLSAVEINGYWRLVDESYMDMILGMLLK 216
BLAST of mRNA_M-pyrifera_M_contig68434.16472.1 vs. uniprot
Match: UPI001ED86812 (sister chromatid cohesion protein DCC1 n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED86812) HSP 1 Score: 83.2 bits (204), Expect = 2.770e-15 Identity = 56/198 (28.28%), Postives = 100/198 (50.51%), Query Frame = 1
Query: 7 LKFSESLDPGSLRLLEVSEELLSEIESGKSLMIKATADQDAVMCTGGCTYGMQFVETSNSVLLVPQALKPEDSGSTGDGEASXXXXXXXXXDVSEEKVAE---IAGIVRGTYTLHEMPSRVWQLRELLEQTRDAETEKMSLRRQRLFAWEDLRRVVQVSDLELWQGLQELGAIRVGKHWRVLTPSFFREAMNAVLEVV 591
L F E + ++LE+++ELL ++ GKSL+I+ D +AV+CT TY ++ ETSNS+LL+P+ + P+D ++ EE++ E + ++ + L RV ++ LLE + E + +++ EDL +VQ S+ EL L E+ A + +WR+L + + +L +V
Sbjct: 42 LFFVEDDEESDFKILELNKELLECVQEGKSLVIRGLEDDEAVLCTDDATYEIRGAETSNSMLLIPELIFPDDVPNS-----------------LEERIIEEKTVISVIHNYFELRRCQPRVNKIARLLESSVYRGKEHENEVSGTMYSLEDLLDIVQCSNKELASALAEIEAYNINGYWRLLEFDYHFRVLTYILNLV 222
BLAST of mRNA_M-pyrifera_M_contig68434.16472.1 vs. uniprot
Match: A0A8B7NXZ1_HYAAZ (Sister chromatid cohesion protein DCC1 n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NXZ1_HYAAZ) HSP 1 Score: 80.5 bits (197), Expect = 2.340e-14 Identity = 60/197 (30.46%), Postives = 99/197 (50.25%), Query Frame = 1
Query: 7 LKFSESLDPGSLRLLEVSEELLSEIESGKSLMIKATADQDAVMCTGGCTYGMQFVETSNSVLLVPQALKPEDSGSTGDGEASXXXXXXXXXDVSEEKVAEIAGIVRGTYTLHEMPSRVWQLRELLEQTRDAETEKMSLR--RQRLFAWEDLRRVVQVSDLELWQGLQELGAIRVGKHWRVLTPSFFREAMNAVLEVV 591
L+F + +P LL++ +L+ ++ G L+++ +D AV+CT T+ ++ ETSNS++LVP L PED S G+ E EI G+ + R+ +LRELL + A + + QR++ DL VQ SD +L L++L A+ + HWR+L +F A ++VL V+
Sbjct: 32 LEFPAAYNPEKYLLLQLPNKLIDAVKQGDELILRGDSDDFAVLCTDNETFEVREAETSNSLVLVPSMLTPEDMKSIGNSR--------------ELLHKEIVGVHNKYLEVRPCLPRLGKLRELLSECPYAGPSHVPMDDDEQRMYDMTDLLDRVQSSDDQLRSALEDLPALFIDGHWRMLEFEYFFGATSSVLGVI 214
BLAST of mRNA_M-pyrifera_M_contig68434.16472.1 vs. uniprot
Match: A0A6J1IFE0_CUCMA (sister chromatid cohesion protein DCC1 n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1IFE0_CUCMA) HSP 1 Score: 79.7 bits (195), Expect = 4.420e-14 Identity = 57/186 (30.65%), Postives = 99/186 (53.23%), Query Frame = 1
Query: 40 LRLLEVSEELLSEIESGKSLMIKATADQDAVMCTGGCTYGMQFVETSNSVLLVPQALKPEDSGSTGDGEASXXXXXXXXXDVSEEKVAEIAGIVRGTYTLHEMPSRVWQLRELLEQTR-----DAETEKMSLRRQRLFAWEDLRRVVQVSDLELWQGLQELGAIRVGKHWRVLTPSFFREAMNAVL 582
L LLEV E+LL E+ + + I+ A+++AV CT TYG+++V TSNSVLL+P + + E + D + + S ++V + + G L E+ R+ +L+ LL + + E+E+M ++++ W DL VQ SD EL GL+ L A+ + +WR++ + + +L
Sbjct: 37 LVLLEVDEKLLEEVLHER-VSIRGQAEEEAVFCTKSKTYGIKYVGTSNSVLLIPPSGRSEYYENELDSQGND----------STKEVVPVIKLAPGIMELVEIAPRIDKLKLLLSENPYSLADEWESEEMDKCEKQMYNWNDLLDKVQASDDELKAGLRALSAVEIDGYWRLVDEKYMDSMLQMLL 211
BLAST of mRNA_M-pyrifera_M_contig68434.16472.1 vs. uniprot
Match: A0A293LQY7_ORNER (Sister chromatid cohesion protein DCC1 (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293LQY7_ORNER) HSP 1 Score: 74.7 bits (182), Expect = 2.490e-12 Identity = 56/195 (28.72%), Postives = 89/195 (45.64%), Query Frame = 1
Query: 7 LKFSESLDPGSLRLLEVSEELLSEIESGKSLMIKATADQDAVMCTGGCTYGMQFVETSNSVLLVPQALKPEDSGSTGDGEASXXXXXXXXXDVSEEKVAEIAGIVRGTYTLHEMPSRVWQLRELLEQTRDAETEKMSLRRQRLFAWEDLRRVVQVSDLELWQGLQELGAIRVGKHWRVLTPSFFREAMNAVLEVV 591
L FS+ D L L+EV +++L ++ESG L + D AV+CT CTY ++ ETSNS+LLVP + P + G+ D D E + ++ I L + SR+ L +LL + TE + DL VQ + E+ L EL ++V +R+L + +N + +
Sbjct: 26 LLFSDEED-SQLLLMEVDKDMLKDLESGDMLTFRGRDDDSAVLCTNKCTYEVREAETSNSLLLVPHLMLPNEMGAVDD-------------DNLTESMKQVPRIFHTYLELRQCSSRLRPLCDLLRRKPFKGTELEDDDLTDKYTLSDLLSAVQARECEILAALDELPVVKVNGFYRLLEVDYHFRVVNFIANYI 206
BLAST of mRNA_M-pyrifera_M_contig68434.16472.1 vs. uniprot
Match: UPI001425AF77 (sister chromatid cohesion protein DCC1-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425AF77) HSP 1 Score: 73.6 bits (179), Expect = 5.510e-12 Identity = 52/186 (27.96%), Postives = 98/186 (52.69%), Query Frame = 1
Query: 40 LRLLEVSEELLSEIESGKSLMIKATADQDAVMCTGGCTYGMQFVETSNSVLLVPQALKPEDSGSTGDGEASXXXXXXXXXDVSEEKVAEIAGIVRGTYTLHEMPSRVWQLRELLEQTRDAETEKMSLRR--QRLFAWEDLRRVVQVSDLELWQGLQELGAIRVGKHWRVLTPSFFREAMNAVLEVV 591
++L+EV+++LLS +++GK L+I+ AV+CT TY ++ ET+N +LLVP + S S D S E K ++AG++ + L ++ ++R LLE + + R +L+ +DL +VQ S+ E+++ L ++ A + HWR+L+ + + ++L +V
Sbjct: 1 MKLMEVNDDLLSNLKAGKRLVIRGEKTDHAVLCTDNTTYDLKLAETTNGLLLVPDGVT---SDSFVDNTRSL-----------EHK--QVAGLIHTYFELKPTRPKLKKVRVLLEDSEYEGAVEEGAREITGKLYTTDDLLDIVQASEDEIFRELAKIQACTINGHWRLLSFEYKSRVIASILNLV 170
BLAST of mRNA_M-pyrifera_M_contig68434.16472.1 vs. uniprot
Match: UPI000BA812FF (sister chromatid cohesion protein DCC1-like isoform X1 n=6 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA812FF) HSP 1 Score: 73.2 bits (178), Expect = 6.890e-12 Identity = 55/188 (29.26%), Postives = 93/188 (49.47%), Query Frame = 1
Query: 40 LRLLEVSEELLSEIESGKSLMIKATADQDAVMCTGGCTYGMQFVETSNSVLLVPQALKPEDSGSTGDGEASXXXXXXXXXDVSEEKVAEIAGIVRGTYTLHEMPSRVWQLRELLEQT----RDAETEKMSLRRQRLFAWEDLRRVVQVSDLELWQGLQELGAIRVGKHWRVLTPSFFREAMNAVLEVV 591
L+L+EV+ ++L++I G+ ++I+ AV+CT TY ++ TSNS+LL+P + P D T D + E+AGI LH RV +LR L+E+ ++ E + + ++ + +EDL V+Q S EL L+EL A + WR+L + N ++ +V
Sbjct: 59 LKLMEVTPDILNQILEGERVIIRGDKSDPAVLCTDTQTYDIKEAGTSNSLLLLPSVVWP-DEAETNDKDDGITIASQ-----------EVAGIFHNYLELHLCRPRVQKLRYLMEENLYTGKEYEADNVDVK----YTFEDLLNVIQASPKELQTALRELQACCIDGFWRMLDFDYQFSVFNHIVNLV 230
BLAST of mRNA_M-pyrifera_M_contig68434.16472.1 vs. uniprot
Match: UPI0018D06200 (sister chromatid cohesion protein DCC1 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D06200) HSP 1 Score: 73.2 bits (178), Expect = 9.680e-12 Identity = 59/209 (28.23%), Postives = 107/209 (51.20%), Query Frame = 1
Query: 22 SLDPGSLRLLEVSEELLSEIESGKSLMIKATADQDAVMCTGGCTYGMQFVETSNSVLLVPQALKPEDSGST---------GDGEASXXXXXXXXX------DVSEEKVAEIAGIVRGTYTLHEMPS---RVWQLRELLEQTRDAETE-KMSLRRQRLFAWEDLRRVVQVSDLELWQGLQELGAIRVGKHWRVLTPSFFREAMNAVLEVV 591
SL +LRL+++ + LL EIE+GK L+ K +++ V+CT TY ++ ETSNS+LLVP+ + D+G GD + S D + + IV +T +E+ R+ +LR++LE TR E + ++ + +L + L +Q S EL Q L+++ AI + ++R+L + ++ +L+++
Sbjct: 39 SLHNDNLRLMQLDDYLLKEIEAGKELVFKGEREENVVLCTETKTYDVKEAETSNSLLLVPELMFATDTGHDETMKNNSMDGDSDTSFDKSNTSLNKSTDSDDGKPPRNIQHKDIVNTFFTYYELKQCKPRLNKLRKILEATRYRGPELEYAVDKSKLLDYNKLFHQIQASRAELTQELEKIQAIEIDGYYRLLEFDYEFRVLSYMLDLI 247 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68434.16472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68434.16472.1 >prot_M-pyrifera_M_contig68434.16472.1 ID=prot_M-pyrifera_M_contig68434.16472.1|Name=mRNA_M-pyrifera_M_contig68434.16472.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp MELKFSESLDPGSLRLLEVSEELLSEIESGKSLMIKATADQDAVMCTGGCback to top mRNA from alignment at M-pyrifera_M_contig68434:138..1232+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68434.16472.1 ID=mRNA_M-pyrifera_M_contig68434.16472.1|Name=mRNA_M-pyrifera_M_contig68434.16472.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1095bp|location=Sequence derived from alignment at M-pyrifera_M_contig68434:138..1232+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68434:138..1232+ >mRNA_M-pyrifera_M_contig68434.16472.1 ID=mRNA_M-pyrifera_M_contig68434.16472.1|Name=mRNA_M-pyrifera_M_contig68434.16472.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1182bp|location=Sequence derived from alignment at M-pyrifera_M_contig68434:138..1232+ (Macrocystis pyrifera P11B4 male)back to top |