mRNA_M-pyrifera_M_contig68387.16456.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68387.16456.1 vs. uniprot
Match: A0A7N0URH8_KALFE (3'-5' exonuclease domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0URH8_KALFE) HSP 1 Score: 101 bits (252), Expect = 3.660e-23 Identity = 61/168 (36.31%), Postives = 97/168 (57.74%), Query Frame = 1
Query: 1 EIESWLTRNRTKMG-AVVGFDVEWRPTFRSGAPINRVSVLQLCVGSEVLVASVNRLSRLPRALQSVLGDASVALVGVGAVADAVKLSKDWGVRVVGAKDV------EVKHEGNLMSLQNLAQSLFHTPKWKSKKLSLSNWERVPLSAPQLTYAALDAFWSFWIHREIE 483
++ ++ R R ++G A++GFD+EWRP+FR G RV+V+Q+C + + S +P +L +L D + VGVG D+VKL KD V +D+ ++ E + SL++L + LFH K ++ L NWE LS PQL YAALDA+ S+ +H+ ++
Sbjct: 103 QLLKFVERKRKEVGQAILGFDIEWRPSFRRGISPGRVAVMQICCDTSLCYVMHIFHSGIPHSLHLLLEDPASTKVGVGIGNDSVKLFKDHNVSTKDVQDLSKLANQKLGGELKMWSLRSLIEELFHKQLEKPCEVQLGNWEAKYLSNPQLKYAALDAYASWCLHQALD 270
BLAST of mRNA_M-pyrifera_M_contig68387.16456.1 vs. uniprot
Match: A0A151SQB5_CAJCA (Werner syndrome ATP-dependent helicase isogeny n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SQB5_CAJCA) HSP 1 Score: 100 bits (250), Expect = 8.280e-23 Identity = 61/159 (38.36%), Postives = 87/159 (54.72%), Query Frame = 1
Query: 22 RNRTKMGAVVGFDVEWRPTFRSGAPINRVSVLQLCVGSEVLVASVNRLSRLPRALQSVLGDASVALVGVGAVADAVKLSKDWGVRVVGAKDVEVKHEGNL-----MSLQNLAQSLFHTPKWKSKKLSLSNWERVPLSAPQLTYAALDAFWSFWIHREIE 483
R R M V+GFD+EW+PTF+ G P +V+V+Q+C + S +P+ LQ +L D +V VG G DAVK+ KD+ + V G D+ L L +LA+ L K KK+ L NWE LS QL YAA DAF S+++++ I+
Sbjct: 110 RKREMMQIVIGFDIEWKPTFKKGVPPGKVAVMQICGDTSHCHVLHLIHSGIPQNLQLLLEDPTVLKVGAGIDGDAVKVFKDYNISVKGVMDLSFHANQKLGGDQKWGLASLAEKLLSKQLKKPKKIRLGNWETPILSQGQLEYAATDAFASWYLYQAIK 268
BLAST of mRNA_M-pyrifera_M_contig68387.16456.1 vs. uniprot
Match: A0A2G9I5G2_9LAMI (DNA helicase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9I5G2_9LAMI) HSP 1 Score: 94.4 bits (233), Expect = 5.460e-21 Identity = 57/153 (37.25%), Postives = 86/153 (56.21%), Query Frame = 1
Query: 46 VVGFDVEWRPTFRSGAPINRVSVLQLCVGSEVLVASVNRLSRLPRALQSVLGDASVALVGVGAVADAVKLSKDWGVRVV--------GAKDVEVKHEGNLMSLQNLAQSLFHTPKWKSKKLSLSNWERVPLSAPQLTYAALDAFWSFWIHREI 480
+VG DVEWRPTF++ + I ++ LQLCVG L+ + R+P L+ LGD VGVG D KL D+G++V AK+++ K G SL+ LA + K ++LS+W+ L+ Q++YA LDA++SF I R++
Sbjct: 57 IVGLDVEWRPTFKANS-IQPLATLQLCVGKSCLIFQIIHAKRIPSQLKKFLGDPDYTFVGVGIENDVRKLRNDYGLKVADTRDLRSWAAKELDRKELGR-SSLKVLAGEVLGEDLAKPTNITLSSWDNRSLTKAQVSYACLDAYFSFEIGRQL 207
BLAST of mRNA_M-pyrifera_M_contig68387.16456.1 vs. uniprot
Match: A0A371HWL1_MUCPR (Werner Syndrome-like exonuclease (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371HWL1_MUCPR) HSP 1 Score: 95.1 bits (235), Expect = 1.290e-20 Identity = 57/159 (35.85%), Postives = 84/159 (52.83%), Query Frame = 1
Query: 22 RNRTKMGAVVGFDVEWRPTFRSGAPINRVSVLQLCVGSEVLVASVNRLSRLPRALQSVLGDASVALVGVGAVADAVKLSKDWGVRVVGAKDVEVKHEGNL-----MSLQNLAQSLFHTPKWKSKKLSLSNWERVPLSAPQLTYAALDAFWSFWIHREIE 483
+ R + +GFD+EW+PTFR G P +V+V+Q+C + S +PR LQ +L D +V VG G DAVK+ +D+ + V G D+ L L +L + L K +K+ L NWE LS QL YAA DAF S+ +++ I+
Sbjct: 113 KKREMIQIAIGFDIEWKPTFRKGVPPGKVAVMQICGDTSSCYVLHLIHSGIPRNLQLLLEDPTVLKVGAGIDGDAVKVFRDYNISVKGVTDLSFHANQKLGGDHKWGLASLTEKLLSKQLKKPQKIRLGNWETPILSKQQLEYAATDAFASWCLYQAIK 271
BLAST of mRNA_M-pyrifera_M_contig68387.16456.1 vs. uniprot
Match: UPI001E692520 (Werner Syndrome-like exonuclease isoform X1 n=2 Tax=Trifolium pratense TaxID=57577 RepID=UPI001E692520) HSP 1 Score: 95.9 bits (237), Expect = 1.330e-20 Identity = 56/157 (35.67%), Postives = 85/157 (54.14%), Query Frame = 1
Query: 22 RNRTKMGAVVGFDVEWRPTFRSGAPINRVSVLQLCVGSEVLVASVNRLSRLPRALQSVLGDASVALVGVGAVADAVKLSKDWGVRVVGAKDVEV----KHEGNL--MSLQNLAQSLFHTPKWKSKKLSLSNWERVPLSAPQLTYAALDAFWSFWIHR 474
+ R M +GFD+EW+PTFR G P + +V+Q+C + S +P+ LQ +L D +V VG G DA K+S+D+G+ + G +D+ K G L L +L + L K K+ + NWE LS QL YAA DAF S+++++
Sbjct: 137 KKREMMQIAIGFDIEWKPTFRRGVPPGKAAVMQICCDTNHCHVLHLIHSGIPQNLQLLLEDPTVLKVGAGIAGDATKVSRDYGISIKGVEDLSFHANQKIGGGLHKWGLASLTEKLLSKQLMKPSKIRMGNWETPFLSKEQLDYAATDAFASWFLYQ 293
BLAST of mRNA_M-pyrifera_M_contig68387.16456.1 vs. uniprot
Match: A0A5J9VJL8_9POAL (3'-5' exonuclease domain-containing protein (Fragment) n=2 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9VJL8_9POAL) HSP 1 Score: 92.4 bits (228), Expect = 2.360e-20 Identity = 64/171 (37.43%), Postives = 91/171 (53.22%), Query Frame = 1
Query: 4 IESWLTR-----NRTKMGAVVGFDVEWRPTFRSGAPINRVSVLQLCVGSEVLVASVNRLSRLPRALQSVLGDASVALVGVGAVADAVKLSKDWGVRVVGAKDVE-VKHEG-NLMSLQN-----LAQSLFHTPKWKSKKLSLSNWERVPLSAPQLTYAALDAFWSFWIHREI 480
+E+WLT R VVGFDVEWRP++RS N V+ LQLCVG L+ + +P AL LG+ VGVG D +LS D ++V A D+ + EG NL L+ +A ++ KS+++++S W+ LS Q+ YA +DAF SF I R +
Sbjct: 27 VEAWLTEVRSVHRRRLNDLVVGFDVEWRPSYRSDQ--NPVATLQLCVGRRCLIFQLLHADYIPGALSEFLGEPGFRFVGVGVDGDVERLSDDHELKVANAVDLRGLAAEGMNLPELRQAGLRAVAAAVMGVNVVKSQRVTMSRWDASCLSYEQIRYACIDAFVSFEIGRRL 195
BLAST of mRNA_M-pyrifera_M_contig68387.16456.1 vs. uniprot
Match: A0A8B8JUZ3_ABRPR (Werner Syndrome-like exonuclease isoform X1 n=2 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8JUZ3_ABRPR) HSP 1 Score: 94.4 bits (233), Expect = 2.570e-20 Identity = 58/160 (36.25%), Postives = 83/160 (51.88%), Query Frame = 1
Query: 22 RNRTKMGAVVGFDVEWRPTFRSGAPINRVSVLQLCVGSEVLVASVNRLSRLPRALQSVLGDASVALVGVGAVADAVKLSKDWGVRVVGAKDVEVKHEGNL------MSLQNLAQSLFHTPKWKSKKLSLSNWERVPLSAPQLTYAALDAFWSFWIHREIE 483
+ R VGFD+EWRPTFR G P +V+V+Q+C + S +PR LQ +L D +V VG G DA K+ +D+ + V G +D+ L L +L + L K K+ L NWE LS QL YAA DAF S+++++ I+
Sbjct: 114 KKREMTRIAVGFDIEWRPTFRKGVPPGKVAVMQICGDTSHCHVLHLIHSGIPRNLQLLLEDPTVLKVGAGIGGDAGKIFRDYNISVKGVEDLSFHANQKLGGGPLKWGLASLTEKLLSRQLKKPSKIRLGNWETPVLSKEQLEYAATDAFASWYLYQAIK 273
BLAST of mRNA_M-pyrifera_M_contig68387.16456.1 vs. uniprot
Match: UPI00103693E3 (Werner Syndrome-like exonuclease isoform X4 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI00103693E3) HSP 1 Score: 92.8 bits (229), Expect = 2.760e-20 Identity = 58/160 (36.25%), Postives = 87/160 (54.37%), Query Frame = 1
Query: 19 TRNRTKMGAVVGFDVEWRPTFRSGAPINRVSVLQLCVGSEVLVASVNRLSRLPRALQSVLGDASVALVGVGAVADAVKLSKDWGVRVVGAKDV------EVKHEGNLMSLQNLAQSLFHTPKWKSKKLSLSNWERVPLSAPQLTYAALDAFWSFWIHREI 480
TR R ++GFD+EWRPTFR G + +V+Q+C + S +P+ LQ++L D + VGVG V DA K+ KD V + G +D+ ++ + SL +L + L K +K+ L NWE LS QL YAA DAF S+++H+ +
Sbjct: 44 TRKRGVDQVILGFDIEWRPTFRRGVSPGKAAVMQICGDTSHCYVMHIIHSGIPQNLQALLEDPTSVKVGVGIVNDAFKVFKDHNVSIKGLEDLSGLANQKLGGDPKKWSLASLTEMLICKQLPKPEKIRLGNWEADFLSKEQLEYAATDAFVSWYLHQAL 203
BLAST of mRNA_M-pyrifera_M_contig68387.16456.1 vs. uniprot
Match: A0A396IWX4_MEDTR (Putative DNA helicase n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A396IWX4_MEDTR) HSP 1 Score: 94.4 bits (233), Expect = 3.360e-20 Identity = 55/160 (34.38%), Postives = 86/160 (53.75%), Query Frame = 1
Query: 22 RNRTKMGAVVGFDVEWRPTFRSGAPINRVSVLQLCVGSEVLVASVNRLSRLPRALQSVLGDASVALVGVGAVADAVKLSKDWGVRVVGAKDVEVKHEGNL------MSLQNLAQSLFHTPKWKSKKLSLSNWERVPLSAPQLTYAALDAFWSFWIHREIE 483
+ R + +GFD+EWRPTF+ G P + +V+Q+C + + S +PR LQ +L D+SV VG G DA K+S+D+ + + G +D+ L L +L + L K K+ + NWE LS QL YAA DAF S+++++ I+
Sbjct: 131 KKRDMIQIPIGFDIEWRPTFKRGVPPGKTAVMQICCDTNHCLVLHLIHSGIPRNLQLLLEDSSVLKVGAGIGGDASKVSRDYFISIKGVEDLSYHANQKLGGGPNKWGLASLTEKLLSKQLKKPSKIRMGNWETPYLSKEQLEYAATDAFASWFLYQTIK 290
BLAST of mRNA_M-pyrifera_M_contig68387.16456.1 vs. uniprot
Match: UPI0018FF3094 (Werner Syndrome-like exonuclease n=1 Tax=Benincasa hispida TaxID=102211 RepID=UPI0018FF3094) HSP 1 Score: 94.4 bits (233), Expect = 3.450e-20 Identity = 56/148 (37.84%), Postives = 84/148 (56.76%), Query Frame = 1
Query: 49 VGFDVEWRPTFRSGAPINRVSVLQLCV-GSEVLVASVNRLSRLPRALQSVLGDASVALVGVGAVADAVKLSKDWGVRVVGAKDVEVKHEGNLM------SLQNLAQSLFHTPKWKSKKLSLSNWERVPLSAPQLTYAALDAFWSFWIH 471
+GFD+EW+PTFR G P + +V+QLC+ S+ V + S +P++LQ++L D ++ GVG V DA K+ KD+ V + ++ L SL +L ++L K K+ L NWE LS QL YAA DAF S+++H
Sbjct: 148 IGFDIEWKPTFRRGVPPGKAAVMQLCLDNSQCHVMHIIH-SGIPQSLQALLEDDTLTKAGVGIVNDATKVLKDYNVSIKAVDEISDIANQKLAGFPRKWSLGSLTETLISKELQKPNKIRLGNWEVAVLSTEQLQYAATDAFASWYLH 294 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68387.16456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68387.16456.1 >prot_M-pyrifera_M_contig68387.16456.1 ID=prot_M-pyrifera_M_contig68387.16456.1|Name=mRNA_M-pyrifera_M_contig68387.16456.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp EIESWLTRNRTKMGAVVGFDVEWRPTFRSGAPINRVSVLQLCVGSEVLVAback to top mRNA from alignment at M-pyrifera_M_contig68387:746..1228- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68387.16456.1 ID=mRNA_M-pyrifera_M_contig68387.16456.1|Name=mRNA_M-pyrifera_M_contig68387.16456.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=483bp|location=Sequence derived from alignment at M-pyrifera_M_contig68387:746..1228- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68387:746..1228- >mRNA_M-pyrifera_M_contig68387.16456.1 ID=mRNA_M-pyrifera_M_contig68387.16456.1|Name=mRNA_M-pyrifera_M_contig68387.16456.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=966bp|location=Sequence derived from alignment at M-pyrifera_M_contig68387:746..1228- (Macrocystis pyrifera P11B4 male)back to top |