mRNA_M-pyrifera_M_contig68385.16455.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68385.16455.1 vs. uniprot
Match: A0A812V938_9DINO (LRRC6 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812V938_9DINO) HSP 1 Score: 109 bits (273), Expect = 9.360e-26 Identity = 51/80 (63.75%), Postives = 63/80 (78.75%), Query Frame = 1
Query: 1 GRWKFHMEDEDGKGNVVLRVALPKFLDASLVDVDAHPTYVRVVAKGKVLLLHWPEEVKSDAGTAQRSTASGELKLTMPKV 240
GR F +EDEDG+GN VL + LP+FLD+SLVDVD HP YV VV K K+ LHWPEEV+ DAG+A+RST +G L +T+PKV
Sbjct: 703 GRLDFKLEDEDGQGNSVLTLPLPRFLDSSLVDVDVHPLYVSVVVKNKLFRLHWPEEVRPDAGSARRSTTTGALVITVPKV 782
BLAST of mRNA_M-pyrifera_M_contig68385.16455.1 vs. uniprot
Match: A0A5A8EHX8_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EHX8_CAFRO) HSP 1 Score: 97.4 bits (241), Expect = 1.710e-21 Identity = 46/88 (52.27%), Postives = 65/88 (73.86%), Query Frame = 1
Query: 10 KFHMEDEDGKGNVVLRVALPKFLDASLVDVDAHPTYVRVVAKGKVLLLHWPEEVKSDAGTAQRSTASGELKLTMPKVHRNPILERIAR 273
+F ++DEDG+GNVVL + LP+FLD+SL+DVDAHP +V +VA+GKV + WP+EV G A RS+ +G L LTMPK ++ R+A+
Sbjct: 294 EFTLDDEDGQGNVVLVLQLPRFLDSSLIDVDAHPGHVSIVARGKVFRMAWPDEVVVAEGKATRSSTTGALTLTMPKARKSRHAMRLAK 381
BLAST of mRNA_M-pyrifera_M_contig68385.16455.1 vs. uniprot
Match: F0WK66_9STRA (Uncharacterized protein AlNc14C130G6917 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WK66_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 3.500e-17 Identity = 39/80 (48.75%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 1 GRWKFHMEDEDGKGNVVLRVALPKFLDASLVDVDAHPTYVRVVAKGKVLLLHWPEEVKSDAGTAQRSTASGELKLTMPKV 240
G+W+FH+ + + ++L + LPKFLD SL+DVD HPTYV ++ K K L +PE V+SD G A+RS A+G L+L +PK
Sbjct: 274 GKWEFHLSETIDQ--LILELNLPKFLDTSLIDVDVHPTYVSIIVKNKRFRLRFPEAVQSDRGKAERSKATGVLRLELPKT 351
BLAST of mRNA_M-pyrifera_M_contig68385.16455.1 vs. uniprot
Match: A0A1X7VK84_AMPQE (LRRcap domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7VK84_AMPQE) HSP 1 Score: 83.6 bits (205), Expect = 1.180e-16 Identity = 45/104 (43.27%), Postives = 65/104 (62.50%), Query Frame = 1
Query: 1 GRWKFHMEDEDGKGNVVLRVALPKFLDASLVDVDAHPTYVRVVAKGKVLLLHWPEEVKSDAGTAQRSTASGELKLTMPKVHRNPIL--ERIARSHKQERGKTKD 306
G++ FH+ ++D VL V+ P+F+D+SLVD + HPT+VRV+ KGK+L L EEV D A+RS +G L +TMPK P+L +R K+ + K KD
Sbjct: 284 GKYDFHLTEDDNNNQFVLDVSCPRFMDSSLVDCEVHPTFVRVLIKGKILQLVLQEEVSPDQSEAKRSQTTGHLLVTMPKS--KPVLRPKRNETMTKESKNKEKD 385
BLAST of mRNA_M-pyrifera_M_contig68385.16455.1 vs. uniprot
Match: A0A226E4Y4_FOLCA (Protein tilB n=2 Tax=Folsomia candida TaxID=158441 RepID=A0A226E4Y4_FOLCA) HSP 1 Score: 82.4 bits (202), Expect = 3.340e-16 Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 1
Query: 13 FHMEDEDGKGNVVLRVALPKFLDASLVDVDAHPTYVRVVAKGKVLLLHWPEEVKSDAGTAQRSTASGELKLTMPKVHRNPIL 258
F + DE + +VL +A+P+FL +L+D D PTYVRV KGK+ L PEEV+ D+ AQRS +G L +TMPKVH + L
Sbjct: 291 FILHDEVERNQIVLDLAVPRFLCITLIDADVQPTYVRVTVKGKIFQLVLPEEVRPDSSYAQRSQTTGHLIVTMPKVHEHSTL 372
BLAST of mRNA_M-pyrifera_M_contig68385.16455.1 vs. uniprot
Match: UPI0004D070E9 (protein tilB homolog n=1 Tax=Galeopterus variegatus TaxID=482537 RepID=UPI0004D070E9) HSP 1 Score: 76.6 bits (187), Expect = 5.260e-16 Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = 1
Query: 13 FHMEDEDGKGNVVLRVALPKFLDASLVDVDAHPTYVRVVAKGKVLLLHWPEEVKSDAGTAQRSTASGELKLTMPKVHRNP 252
F ++D++ + ++L +A+ +++D SL+DVD PTYVRV+ KGK L P EVK D+ +A+RS +G L + MPKV P
Sbjct: 3 FSLKDDEKRNQIILDLAVYRYMDTSLIDVDVQPTYVRVMVKGKPFQLVLPAEVKPDSSSAKRSQTTGHLVICMPKVLNEP 82
BLAST of mRNA_M-pyrifera_M_contig68385.16455.1 vs. uniprot
Match: UPI0007F89405 (protein tilB homolog isoform X1 n=3 Tax=Kryptolebias marmoratus TaxID=37003 RepID=UPI0007F89405) HSP 1 Score: 81.6 bits (200), Expect = 5.810e-16 Identity = 40/86 (46.51%), Postives = 58/86 (67.44%), Query Frame = 1
Query: 10 KFHMEDEDGKGNVVLRVALPKFLDASLVDVDAHPTYVRVVAKGKVLLLHWPEEVKSDAGTAQRSTASGELKLTMPKVHRNPILERI 267
+F + +++ G+V+L +A+ + +D SL+DVD HPT+VRV+ KGKV + P EVK D TAQRS +G L LTMP+V L R+
Sbjct: 273 EFSLTEDEESGSVLLDLAVYRHMDTSLIDVDIHPTFVRVLVKGKVFQVVLPAEVKPDGSTAQRSQTTGHLVLTMPRVRTPLDLSRV 358
BLAST of mRNA_M-pyrifera_M_contig68385.16455.1 vs. uniprot
Match: A0A7S2XPK9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XPK9_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 8.150e-16 Identity = 40/80 (50.00%), Postives = 54/80 (67.50%), Query Frame = 1
Query: 1 GRWKFHMEDEDGKGNVVLRVALPKFLDASLVDVDAHPTYVRVVAKGKVLLLHWPEEVKSDAGTAQRSTASGELKLTMPKV 240
G+W+F +++E G VL V L K+L SLVDVD HPT+VR+V K K+L L P EV++ AQRS +G L ++MPKV
Sbjct: 282 GKWEFTLDEETRPGYFVLDVTLQKYLSTSLVDVDVHPTFVRIVIKSKLLRLVLPCEVQAKESIAQRSATTGHLVISMPKV 361
BLAST of mRNA_M-pyrifera_M_contig68385.16455.1 vs. uniprot
Match: A0A8J6EBZ3_ELECQ (Uncharacterized protein (Fragment) n=1 Tax=Eleutherodactylus coqui TaxID=57060 RepID=A0A8J6EBZ3_ELECQ) HSP 1 Score: 74.7 bits (182), Expect = 1.370e-15 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 1
Query: 4 RWKFHMEDEDGKGNVVLRVALPKFLDASLVDVDAHPTYVRVVAKGKVLLLHWPEEVKSDAGTAQRSTASGELKLTMPK 237
R F + D++ ++L + + + LD SLVDVD HP YVRV+ K K L PEEVK D+ +A+RS +G L +TMPK
Sbjct: 3 RLDFSLVDDEENNQIILDLGIYRHLDTSLVDVDVHPNYVRVLVKNKAFQLVLPEEVKPDSSSARRSQTTGHLVVTMPK 80
BLAST of mRNA_M-pyrifera_M_contig68385.16455.1 vs. uniprot
Match: A0A2P8Y373_BLAGE (Protein tilB n=1 Tax=Blattella germanica TaxID=6973 RepID=A0A2P8Y373_BLAGE) HSP 1 Score: 80.1 bits (196), Expect = 1.730e-15 Identity = 35/77 (45.45%), Postives = 58/77 (75.32%), Query Frame = 1
Query: 13 FHMEDEDGKGNVVLRVALPKFLDASLVDVDAHPTYVRVVAKGKVLLLHWPEEVKSDAGTAQRSTASGELKLTMPKVH 243
F + +++ ++VL +A+ ++LD SL+DVD HPTYV+V+ KGK+ + + EE+K+++ TA+RS +G L LTMPKV+
Sbjct: 237 FQLSEDEETNSLVLDIAIYRYLDTSLLDVDIHPTYVKVLIKGKIFQIVFNEEIKTESSTAKRSQTTGHLVLTMPKVN 313 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68385.16455.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68385.16455.1 >prot_M-pyrifera_M_contig68385.16455.1 ID=prot_M-pyrifera_M_contig68385.16455.1|Name=mRNA_M-pyrifera_M_contig68385.16455.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp MEDEDGKGNVVLRVALPKFLDASLVDVDAHPTYVRVVAKGKVLLLHWPEEback to top mRNA from alignment at M-pyrifera_M_contig68385:3..311+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68385.16455.1 ID=mRNA_M-pyrifera_M_contig68385.16455.1|Name=mRNA_M-pyrifera_M_contig68385.16455.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=309bp|location=Sequence derived from alignment at M-pyrifera_M_contig68385:3..311+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68385:3..311+ >mRNA_M-pyrifera_M_contig68385.16455.1 ID=mRNA_M-pyrifera_M_contig68385.16455.1|Name=mRNA_M-pyrifera_M_contig68385.16455.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig68385:3..311+ (Macrocystis pyrifera P11B4 male)back to top |