mRNA_M-pyrifera_M_contig68339.16445.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68339.16445.1 vs. uniprot
Match: D7FH69_ECTSI (Cathepsin X n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH69_ECTSI) HSP 1 Score: 191 bits (484), Expect = 1.070e-57 Identity = 85/107 (79.44%), Postives = 95/107 (88.79%), Query Frame = 1
Query: 1 VILNCATDIAGSCHGGTHTGTYEYASNNPVPFDTCQQYQASDNTCDDIGTCKTCWDFDTPCEAVESYPNATVAEYGVVSGEGDMMAEIFARGPIACEIAAGALHEYT 321
VILNCAT++AGSCHGGTHTGTYEYASNNPVPFDTCQ YQA DNTCD IG CKTCW F+ CEAV+SYPNATV+EYG V GE ++MAE+FARGP+AC+IAA LHEYT
Sbjct: 124 VILNCATEVAGSCHGGTHTGTYEYASNNPVPFDTCQNYQAEDNTCDAIGKCKTCWSFNEECEAVQSYPNATVSEYGTVVGEENIMAEVFARGPVACDIAASRLHEYT 230
BLAST of mRNA_M-pyrifera_M_contig68339.16445.1 vs. uniprot
Match: A0A6H5J6W1_9PHAE (Cathepsin X n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6W1_9PHAE) HSP 1 Score: 187 bits (475), Expect = 2.410e-56 Identity = 84/107 (78.50%), Postives = 93/107 (86.92%), Query Frame = 1
Query: 1 VILNCATDIAGSCHGGTHTGTYEYASNNPVPFDTCQQYQASDNTCDDIGTCKTCWDFDTPCEAVESYPNATVAEYGVVSGEGDMMAEIFARGPIACEIAAGALHEYT 321
VILNCAT++AGSC+GGTHTGTYEYASNNPVPFDTCQ YQA DNTCD IG CKTCW FD C AV+SYPNATVAEYG V GE ++MAE+FARGP+AC+I A LHEYT
Sbjct: 114 VILNCATEVAGSCYGGTHTGTYEYASNNPVPFDTCQNYQAEDNTCDAIGKCKTCWSFDEECAAVQSYPNATVAEYGTVVGEENIMAEVFARGPVACDINASTLHEYT 220
BLAST of mRNA_M-pyrifera_M_contig68339.16445.1 vs. uniprot
Match: D8LCL2_ECTSI (Cathepsin X n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL2_ECTSI) HSP 1 Score: 194 bits (492), Expect = 6.350e-56 Identity = 88/107 (82.24%), Postives = 96/107 (89.72%), Query Frame = 1
Query: 1 VILNCATDIAGSCHGGTHTGTYEYASNNPVPFDTCQQYQASDNTCDDIGTCKTCWDFDTPCEAVESYPNATVAEYGVVSGEGDMMAEIFARGPIACEIAAGALHEYT 321
VILNCAT++AGSCHGG+HTGTYEYASNNPVPFDTCQQYQASDNTCD IG CKTCW+FD C AVES+PNATVAEYG VSGE D+MAE+FARGP+ACEI A L EYT
Sbjct: 94 VILNCATELAGSCHGGSHTGTYEYASNNPVPFDTCQQYQASDNTCDAIGKCKTCWNFDEECAAVESFPNATVAEYGTVSGEADIMAEVFARGPVACEIDASPLREYT 200
BLAST of mRNA_M-pyrifera_M_contig68339.16445.1 vs. uniprot
Match: A0A7S2V244_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V244_9STRA) HSP 1 Score: 141 bits (355), Expect = 3.920e-39 Identity = 64/107 (59.81%), Postives = 78/107 (72.90%), Query Frame = 1
Query: 1 VILNCATDIAGSCHGGTHTGTYEYASNNPVPFDTCQQYQASDNTCDDIGTCKTCWDFDTPCEAVESYPNATVAEYGVVSGEGDMMAEIFARGPIACEIAAGALHEYT 321
VILNCA ++AGSCHGG +G YE+A NN VPFDTCQQY+A D C C++C F + C AV YPN TV+EYG+V GE +MM EI+ RGPIAC+I +G LH YT
Sbjct: 114 VILNCAQNVAGSCHGGEPSGVYEWAHNNSVPFDTCQQYKAIDEECIPSNICRSCTSFSSDCYAVSQYPNVTVSEYGLVQGEANMMTEIYERGPIACDINSGQLHTYT 220
BLAST of mRNA_M-pyrifera_M_contig68339.16445.1 vs. uniprot
Match: A0A835YGR9_9STRA (Cathepsin X n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGR9_9STRA) HSP 1 Score: 140 bits (353), Expect = 3.320e-38 Identity = 64/107 (59.81%), Postives = 76/107 (71.03%), Query Frame = 1
Query: 1 VILNCATDIAGSCHGGTHTGTYEYASNNPVPFDTCQQYQASDNTCDDIGTCKTCWDFDTPCEAVESYPNATVAEYGVVSGEGDMMAEIFARGPIACEIAAGALHEYT 321
VILNCAT AGSCHGG G +E+ + N +PFDTCQQY+A D C+ + C+TCW FD C V YPNATVAE+G GE +M E+FARGPIAC+I A LHEYT
Sbjct: 112 VILNCATATAGSCHGGFAKGVFEWGTENAIPFDTCQQYKARDEKCEPLNVCRTCWTFDDTCIPVAPYPNATVAEFGDAVGERAIMKEVFARGPIACDIDADPLHEYT 218
BLAST of mRNA_M-pyrifera_M_contig68339.16445.1 vs. uniprot
Match: A0A7S2RSF5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RSF5_9STRA) HSP 1 Score: 124 bits (311), Expect = 7.700e-32 Identity = 60/119 (50.42%), Postives = 79/119 (66.39%), Query Frame = 1
Query: 4 ILNCATDIAGSCHGGTHTGTYEYASNNP-VPFDTCQQYQAS------------DNTCDDIGTCKTCWDFDTPCEAVESYPNATVAEYGVVSGEGDMMAEIFARGPIACEIAAGALHEYT 321
ILNC +D+AGSC+GG+ +GTY+ + VP+DTCQ Y A D TC I TC+TC F C A++ +PNA++AEYG +SGE DM+AEI+ARGPIAC I A +H+YT
Sbjct: 155 ILNCGSDVAGSCYGGSGSGTYQLVKDTGYVPYDTCQPYLACSSDSAEGFCGSVDTTCSAINTCRTCSTFGVDCAAIDVFPNASIAEYGTISGEEDMLAEIYARGPIACSIDATPIHDYT 273
BLAST of mRNA_M-pyrifera_M_contig68339.16445.1 vs. uniprot
Match: A0A0H5QKS6_9EUKA (Cathepsin X n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QKS6_9EUKA) HSP 1 Score: 116 bits (290), Expect = 3.290e-29 Identity = 56/107 (52.34%), Postives = 70/107 (65.42%), Query Frame = 1
Query: 1 VILNCATDIAGSCHGGTHTGTYEYASNNPVPFDTCQQYQASDNTCDDIGTCKTCWDFDTPCEAVESYPNATVAEYGVVSGEGDMMAEIFARGPIACEIAAGALHEYT 321
VILNC T +AGSC GG G YE+ ++ +P DTCQQY+A D+ C +I C+ C C V YP+ V EYG VSGE MMAEI+ARGPIAC++ A +L YT
Sbjct: 113 VILNCGTHVAGSCDGGESGGVYEWVHDHGIPEDTCQQYKAEDDECTNINKCRNCDPLTNICSPVNKYPSWFVDEYGEVSGEHRMMAEIYARGPIACQVDATSLETYT 219
BLAST of mRNA_M-pyrifera_M_contig68339.16445.1 vs. uniprot
Match: A0A7S0QTS4_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0QTS4_9CHLO) HSP 1 Score: 117 bits (292), Expect = 4.050e-29 Identity = 63/122 (51.64%), Postives = 75/122 (61.48%), Query Frame = 1
Query: 4 ILNCATDIAGSCHGGTHTGTYEYASNNP-VPFDTCQQYQA------------SDNTCDDIGTCKTCWDFDTP---CEAVESYPNATVAEYGVVSGEGDMMAEIFARGPIACEIAAGALHEYT 321
ILNC IAGSCHGG+HTG Y + + VP+DTC Y+A D TC I TC+TC F C V+ +PNAT++EYG VSGE MMAEI+ARGPIACEI A L +YT
Sbjct: 150 ILNCGAGIAGSCHGGSHTGVYHFIKQSGFVPYDTCLVYEACSQESTEGTCGGGDYTCKPINTCRTCSTFSKFGGFCSEVDEFPNATISEYGRVSGEAKMMAEIYARGPIACEIDATPLDDYT 271
BLAST of mRNA_M-pyrifera_M_contig68339.16445.1 vs. uniprot
Match: A0A0L0G2H7_9EUKA (Cathepsin X n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G2H7_9EUKA) HSP 1 Score: 115 bits (287), Expect = 1.890e-28 Identity = 61/122 (50.00%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 4 ILNCATDIAGSCHGGTHTGTYEYASN--NPVPFDTCQQYQAS------------DNTCDDIGTCKTCWDFDTP---CEAVESYPNATVAEYGVVSGEGDMMAEIFARGPIACEIAAGALHEY 318
ILNC TD+AGSCHGG+HTG Y + N +P+DTC QY+A D TC TC+TC F C V+ YPNAT+AEYG V GE +MMAEI+ RGPIAC I A + Y
Sbjct: 138 ILNCGTDVAGSCHGGSHTGAYNFVKNYAKHIPYDTCLQYEACSAESTEGTCKDRDFTCTGANTCRTCSTFTAYGGFCSEVDRYPNATIAEYGNVVGEYNMMAEIYRRGPIACGIDASPVDNY 259
BLAST of mRNA_M-pyrifera_M_contig68339.16445.1 vs. uniprot
Match: A4RRS0_OSTLU (Pept_C1 domain-containing protein n=2 Tax=Ostreococcus TaxID=70447 RepID=A4RRS0_OSTLU) HSP 1 Score: 112 bits (281), Expect = 6.610e-28 Identity = 59/122 (48.36%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 4 ILNCATDIAGSCHGGTHTGTYEYASNNP-VPFDTCQQYQA-------------SDNTCDDIGTCKTCW---DFDTPCEAVESYPNATVAEYGVVSGEGDMMAEIFARGPIACEIAAGALHEY 318
ILNC T+IAGSCHGG+HTG Y++ + VP+DTC Y+A D TC + TC+TC +F C A+ ++PNATVAEYG++SGE ++MAEIFARGP++ I A L Y
Sbjct: 86 ILNCGTEIAGSCHGGSHTGAYQFVHDTGFVPYDTCLPYEACSAESTEGNCARGGDYTCTAMNTCRTCSTFAEFGGFCSALSTFPNATVAEYGMISGEKEIMAEIFARGPVSAGIDADGLRGY 207 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68339.16445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68339.16445.1 >prot_M-pyrifera_M_contig68339.16445.1 ID=prot_M-pyrifera_M_contig68339.16445.1|Name=mRNA_M-pyrifera_M_contig68339.16445.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp VILNCATDIAGSCHGGTHTGTYEYASNNPVPFDTCQQYQASDNTCDDIGTback to top mRNA from alignment at M-pyrifera_M_contig68339:199..1091- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68339.16445.1 ID=mRNA_M-pyrifera_M_contig68339.16445.1|Name=mRNA_M-pyrifera_M_contig68339.16445.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=893bp|location=Sequence derived from alignment at M-pyrifera_M_contig68339:199..1091- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68339:199..1091- >mRNA_M-pyrifera_M_contig68339.16445.1 ID=mRNA_M-pyrifera_M_contig68339.16445.1|Name=mRNA_M-pyrifera_M_contig68339.16445.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig68339:199..1091- (Macrocystis pyrifera P11B4 male)back to top |