mRNA_M-pyrifera_M_contig68222.16431.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig68222.16431.1 vs. uniprot
Match: K3WSU9_GLOUD (40S ribosomal protein S21 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSU9_GLOUD) HSP 1 Score: 102 bits (253), Expect = 9.860e-27 Identity = 43/76 (56.58%), Postives = 62/76 (81.58%), Query Frame = 1
Query: 4 MQNASGENVELYIPRKCSWTNRLIAAKDHGAIQLNVGVVDGSGILTDKLLTYALAGKVRERGESDLALTELVTRDD 231
MQN +GE++++YIPRKCSWTNR++AAKDH ++Q+NV V+ +G+ T + T+ALAG +R +GE+DLALTEL + D
Sbjct: 1 MQNEAGESIDIYIPRKCSWTNRILAAKDHASVQINVARVNANGVFTGESDTFALAGYIRSKGEADLALTELARQAD 76
BLAST of mRNA_M-pyrifera_M_contig68222.16431.1 vs. uniprot
Match: G4ZUD9_PHYSP (40S ribosomal protein S21 n=7 Tax=Peronosporaceae TaxID=4777 RepID=G4ZUD9_PHYSP) HSP 1 Score: 100 bits (250), Expect = 2.830e-26 Identity = 42/76 (55.26%), Postives = 60/76 (78.95%), Query Frame = 1
Query: 4 MQNASGENVELYIPRKCSWTNRLIAAKDHGAIQLNVGVVDGSGILTDKLLTYALAGKVRERGESDLALTELVTRDD 231
MQN +G+++++YIPRKCSWTNR++AAKDH ++Q+NVG V+ +G+ T + TYALAG +R GE D A+TEL + D
Sbjct: 1 MQNEAGQSIDIYIPRKCSWTNRILAAKDHASVQINVGRVNANGVFTGESDTYALAGYIRHHGEGDQAITELARQTD 76
BLAST of mRNA_M-pyrifera_M_contig68222.16431.1 vs. uniprot
Match: A0A0P1AAL2_PLAHL (40S ribosomal protein S21 n=16 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AAL2_PLAHL) HSP 1 Score: 99.8 bits (247), Expect = 8.100e-26 Identity = 41/76 (53.95%), Postives = 61/76 (80.26%), Query Frame = 1
Query: 4 MQNASGENVELYIPRKCSWTNRLIAAKDHGAIQLNVGVVDGSGILTDKLLTYALAGKVRERGESDLALTELVTRDD 231
MQN +G+++++YIPRKCSWTNR++AAKDH ++Q+NVG V+ +G+ T + T+ALAG +R GE D+A+TEL + D
Sbjct: 1 MQNEAGQSIDIYIPRKCSWTNRILAAKDHASVQINVGRVNANGVFTGESDTFALAGYIRHHGEGDIAITELSRQAD 76
BLAST of mRNA_M-pyrifera_M_contig68222.16431.1 vs. uniprot
Match: B8BZU9_THAPS (40S ribosomal protein S21 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZU9_THAPS) HSP 1 Score: 99.8 bits (247), Expect = 9.310e-26 Identity = 46/82 (56.10%), Postives = 62/82 (75.61%), Query Frame = 1
Query: 4 MQNASGENVELYIPRKCSWTNRLIAAKDHGAIQLNVGVVDG-SGILTDKLLTYALAGKVRERGESDLALTELVTRDDRAMRE 246
MQN +GENV+LYIPRKCSWTNRLI AKDHG++Q+NV VD +G+ T + YA+AG +R++ E D+A T LV +D+ + E
Sbjct: 1 MQNENGENVDLYIPRKCSWTNRLIRAKDHGSVQINVANVDPVTGLFTGESTAYAMAGYIRDKSEGDMAFTALVEANDKKVLE 82
BLAST of mRNA_M-pyrifera_M_contig68222.16431.1 vs. uniprot
Match: A0A812Q5U2_9DINO (40S ribosomal protein S21 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q5U2_9DINO) HSP 1 Score: 99.4 bits (246), Expect = 1.150e-25 Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 1
Query: 4 MQNASGENVELYIPRKCSWTNRLIAAKDHGAIQLNVGVVDGS-GILTDKLLTYALAGKVRERGESDLALTELVTRDDRA 237
MQ+ASGE V+LYIPRKCSWTNRLIAAKDH ++Q+NV +D + G TYAL G +R +GE+DLALTELV + D A
Sbjct: 1 MQSASGEKVDLYIPRKCSWTNRLIAAKDHASVQINVADIDPTTGKYEGDYQTYALCGFIRAKGEADLALTELVAKADSA 79
BLAST of mRNA_M-pyrifera_M_contig68222.16431.1 vs. uniprot
Match: A0A2D4BKA2_PYTIN (40S ribosomal protein S21 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKA2_PYTIN) HSP 1 Score: 99.0 bits (245), Expect = 1.630e-25 Identity = 42/76 (55.26%), Postives = 62/76 (81.58%), Query Frame = 1
Query: 4 MQNASGENVELYIPRKCSWTNRLIAAKDHGAIQLNVGVVDGSGILTDKLLTYALAGKVRERGESDLALTELVTRDD 231
MQNA+G+N+++YIPRKCSWTNR+IAAKDH ++QL++ V+ +G+ T + + ALAG +R +GESD+A+TEL + D
Sbjct: 1 MQNAAGQNIDIYIPRKCSWTNRIIAAKDHASVQLSIARVNANGVYTGETDSIALAGYIRGKGESDMAVTELARQID 76
BLAST of mRNA_M-pyrifera_M_contig68222.16431.1 vs. uniprot
Match: A0A067BLB8_SAPPC (40S ribosomal protein S21 n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BLB8_SAPPC) HSP 1 Score: 97.8 bits (242), Expect = 4.680e-25 Identity = 43/74 (58.11%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 4 MQNASGENVELYIPRKCSWTNRLIAAKDHGAIQLNVGVVDGSGILTDKLLTYALAGKVRERGESDLALTELVTR 225
MQN +G+N++LYIPRKCSWTNR++AAKDH ++Q+ V VD +G+ T YALAG +R +GE D ALTEL R
Sbjct: 1 MQNLAGQNIDLYIPRKCSWTNRILAAKDHASVQIAVAQVDANGVYTGHNDVYALAGYIRNKGEGDHALTELARR 74
BLAST of mRNA_M-pyrifera_M_contig68222.16431.1 vs. uniprot
Match: W7TTZ6_9STRA (40S ribosomal protein S21 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTZ6_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 6.830e-25 Identity = 45/77 (58.44%), Postives = 60/77 (77.92%), Query Frame = 1
Query: 4 MQNASGENVELYIPRKCSWTNRLIAAKDHGAIQLNVGVVDGSGI-LTDKLLTYALAGKVRERGESDLALTELVTRDD 231
MQN +G+NV+LYIPRKCSWTNR+I +KDH A+Q+NV VD SG+ L L T A+AG +R +GE+D A+TE+V + D
Sbjct: 1 MQNEAGQNVDLYIPRKCSWTNRVIHSKDHAAVQVNVANVDASGVYLQGDLKTIAMAGYIRAKGEADAAMTEMVKKAD 77
BLAST of mRNA_M-pyrifera_M_contig68222.16431.1 vs. uniprot
Match: F0WM79_9STRA (40S ribosomal protein S21 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WM79_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 9.980e-25 Identity = 41/72 (56.94%), Postives = 59/72 (81.94%), Query Frame = 1
Query: 4 MQNASGENVELYIPRKCSWTNRLIAAKDHGAIQLNVGVVDGSGILTDKLLTYALAGKVRERGESDLALTELV 219
MQN +G+N+++YIPRKCSWTNR+IAAKD ++Q+++G V+ G+ T + T+ALAG +R +GESD+ALTEL
Sbjct: 1 MQNEAGQNIDIYIPRKCSWTNRIIAAKDQSSVQISIGRVNEHGLFTGESDTFALAGYIRGKGESDMALTELA 72
BLAST of mRNA_M-pyrifera_M_contig68222.16431.1 vs. uniprot
Match: A0A7S3FP24_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FP24_9CHLO) HSP 1 Score: 97.8 bits (242), Expect = 1.060e-24 Identity = 46/80 (57.50%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 1 SMQNASGENVELYIPRKCSWTNRLIAAKDHGAIQLNVGVVDGSGILTDKLLTYALAGKVRERGESDLALTELVTRDDRAM 240
+M N G+NV+LYIPRKCSW+NRLI AKDH AIQLNVG +D G+ T K T+A+ G VR RGESD L L ++ M
Sbjct: 27 TMINDEGQNVDLYIPRKCSWSNRLIGAKDHSAIQLNVGHLDDKGVYTGKYTTFAIGGAVRHRGESDSGLDHLWSKKKAEM 106 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig68222.16431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig68222.16431.1 >prot_M-pyrifera_M_contig68222.16431.1 ID=prot_M-pyrifera_M_contig68222.16431.1|Name=mRNA_M-pyrifera_M_contig68222.16431.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp MQNASGENVELYIPRKCSWTNRLIAAKDHGAIQLNVGVVDGSGILTDKLLback to top mRNA from alignment at M-pyrifera_M_contig68222:608..1064- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig68222.16431.1 ID=mRNA_M-pyrifera_M_contig68222.16431.1|Name=mRNA_M-pyrifera_M_contig68222.16431.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=457bp|location=Sequence derived from alignment at M-pyrifera_M_contig68222:608..1064- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig68222:608..1064- >mRNA_M-pyrifera_M_contig68222.16431.1 ID=mRNA_M-pyrifera_M_contig68222.16431.1|Name=mRNA_M-pyrifera_M_contig68222.16431.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=492bp|location=Sequence derived from alignment at M-pyrifera_M_contig68222:608..1064- (Macrocystis pyrifera P11B4 male)back to top |