mRNA_M-pyrifera_M_contig6811.16414.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6811.16414.1 vs. uniprot
Match: D8LKP5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP5_ECTSI) HSP 1 Score: 127 bits (320), Expect = 2.440e-33 Identity = 63/87 (72.41%), Postives = 76/87 (87.36%), Query Frame = 1
Query: 10 QAHPPSDAGRKIRNARRKLQGENPAAVVINDLEQNKAVKRNGSLEKLKAISWGRSGNRIRSRPENVEGWLSVEDQVECLIDLATDPD 270
Q PP +A RKI+NA+RKL GENPAAV+I+DL QN +VK+ GSL KL+AISWG SG+R+RS+PE+ EGWLSVEDQV+CLIDLATDPD
Sbjct: 311 QPRPPFEARRKIKNAKRKLLGENPAAVLIDDLGQNLSVKQLGSLAKLEAISWGSSGDRVRSKPEHREGWLSVEDQVDCLIDLATDPD 397
BLAST of mRNA_M-pyrifera_M_contig6811.16414.1 vs. uniprot
Match: A0A7S3UTP8_HETAK (Non-specific serine/threonine protein kinase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTP8_HETAK) HSP 1 Score: 62.4 bits (150), Expect = 2.310e-9 Identity = 40/82 (48.78%), Postives = 52/82 (63.41%), Query Frame = 1
Query: 22 PSDAGRKIRNARRKLQGENPAAVVINDLEQNKAVKRNGSLEKLKAISWGRSGNRIRSRPENVEGWLSVEDQVECLIDLATDP 267
P + RKIRN RKL G +P V+ +DL++N VK S +KLK I+ S + RS E E LSV DQVECL++LA+DP
Sbjct: 441 PWEPDRKIRNTLRKLTGYHPVGVLCDDLKKNTTVKHFKSFDKLKEIAL--SSDCARSSFELTEV-LSVADQVECLVELASDP 519
BLAST of mRNA_M-pyrifera_M_contig6811.16414.1 vs. uniprot
Match: A0A836CRJ1_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRJ1_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 6.830e-8 Identity = 37/83 (44.58%), Postives = 46/83 (55.42%), Query Frame = 1
Query: 25 SDAGRKIRNARRKLQGENPAAVVINDLEQNKAVKRNGSLEKLKAISWGRSGNRIRSRPENVEGW-LSVEDQVECLIDLATDPD 270
S+A RK+ NAR KL G +P+AVV+ DLE N AV + SL A++ LS QV+CLIDLATDPD
Sbjct: 279 SEARRKVGNARAKLAGAHPSAVVVADLEHNAAVAKFKSLAAWSAVAXXXXXXXXXXXXXXXXXXTLSAAAQVDCLIDLATDPD 361
BLAST of mRNA_M-pyrifera_M_contig6811.16414.1 vs. uniprot
Match: A0A8C4S1K8_ERPCA (DNA-dependent protein kinase catalytic subunit n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=A0A8C4S1K8_ERPCA) HSP 1 Score: 56.2 bits (134), Expect = 3.640e-7 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 40 KIRNARRKLQGENPAAVVINDLEQNKAVKRNGSLEKLKAISWGRSGNRIRSRPENVEGWLSVEDQVECLIDLATDP 267
K+ ARRKL+G NPAA+ ++L+ ++N + + + A++ G IR+R E G LSVE QVECLID ATDP
Sbjct: 3747 KVNFARRKLEGANPAAITGDELKLG--FEKNPAFQSILAVTQGAQEFNIRAR-EAAHG-LSVETQVECLIDQATDP 3818
BLAST of mRNA_M-pyrifera_M_contig6811.16414.1 vs. uniprot
Match: A0A8C4S1N9_ERPCA (DNA-dependent protein kinase catalytic subunit n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=A0A8C4S1N9_ERPCA) HSP 1 Score: 56.2 bits (134), Expect = 3.640e-7 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 40 KIRNARRKLQGENPAAVVINDLEQNKAVKRNGSLEKLKAISWGRSGNRIRSRPENVEGWLSVEDQVECLIDLATDP 267
K+ ARRKL+G NPAA+ ++L+ ++N + + + A++ G IR+R E G LSVE QVECLID ATDP
Sbjct: 3753 KVNFARRKLEGANPAAITGDELKLG--FEKNPAFQSILAVTQGAQEFNIRAR-EAAHG-LSVETQVECLIDQATDP 3824
BLAST of mRNA_M-pyrifera_M_contig6811.16414.1 vs. uniprot
Match: A0A8C4S1I1_ERPCA (DNA-dependent protein kinase catalytic subunit n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=A0A8C4S1I1_ERPCA) HSP 1 Score: 56.2 bits (134), Expect = 3.640e-7 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 40 KIRNARRKLQGENPAAVVINDLEQNKAVKRNGSLEKLKAISWGRSGNRIRSRPENVEGWLSVEDQVECLIDLATDP 267
K+ ARRKL+G NPAA+ ++L+ ++N + + + A++ G IR+R E G LSVE QVECLID ATDP
Sbjct: 3814 KVNFARRKLEGANPAAITGDELKLG--FEKNPAFQSILAVTQGAQEFNIRAR-EAAHG-LSVETQVECLIDQATDP 3885
BLAST of mRNA_M-pyrifera_M_contig6811.16414.1 vs. uniprot
Match: A0A8C4X799_ERPCA (DNA-dependent protein kinase catalytic subunit n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=A0A8C4X799_ERPCA) HSP 1 Score: 56.2 bits (134), Expect = 3.640e-7 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 40 KIRNARRKLQGENPAAVVINDLEQNKAVKRNGSLEKLKAISWGRSGNRIRSRPENVEGWLSVEDQVECLIDLATDP 267
K+ ARRKL+G NPAA+ ++L+ ++N + + + A++ G IR+R E G LSVE QVECLID ATDP
Sbjct: 3884 KVNFARRKLEGANPAAITGDELKLG--FEKNPAFQSILAVTQGAQEFNIRAR-EAAHG-LSVETQVECLIDQATDP 3955
BLAST of mRNA_M-pyrifera_M_contig6811.16414.1 vs. uniprot
Match: F2U190_SALR5 (DNA-dependent protein kinase catalytic subunit n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U190_SALR5) HSP 1 Score: 56.2 bits (134), Expect = 3.640e-7 Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 52 ARRKLQGENPAAVVINDLEQNKAVKRNGSLE-KLKAISWGRSGNRIRSR-PENVEGWLSVEDQVECLIDLATDP 267
A+RKL G+NPA ++I++LE N+ V + S K K I G + + IR+ PE+ LSVEDQV CL+D ATDP
Sbjct: 4034 AKRKLAGDNPAHILISELESNRHVTSDRSWHRKAKDIIAGDAQSNIRATMPEH---GLSVEDQVRCLLDQATDP 4104
BLAST of mRNA_M-pyrifera_M_contig6811.16414.1 vs. uniprot
Match: UPI0010A07A66 (LOW QUALITY PROTEIN: DNA-dependent protein kinase catalytic subunit n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=UPI0010A07A66) HSP 1 Score: 56.2 bits (134), Expect = 3.640e-7 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 40 KIRNARRKLQGENPAAVVINDLEQNKAVKRNGSLEKLKAISWGRSGNRIRSRPENVEGWLSVEDQVECLIDLATDP 267
K+ ARRKL+G NPAA+ ++L+ ++N + + + A++ G IR+R E G LSVE QVECLID ATDP
Sbjct: 4048 KVNFARRKLEGANPAAITGDELKLG--FEKNPAFQSILAVTQGAQEFNIRAR-EAAHG-LSVETQVECLIDQATDP 4119
BLAST of mRNA_M-pyrifera_M_contig6811.16414.1 vs. uniprot
Match: A0A482XB95_LAOST (DNA-dependent protein kinase catalytic subunit n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482XB95_LAOST) HSP 1 Score: 55.5 bits (132), Expect = 6.800e-7 Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 40 KIRNARRKLQGENPAAVVINDLEQNKAVKRNGSLEKLKAISWGRSGNRIRSRPENVEGWLSVEDQVECLIDLATD 264
KI AR+KL G NP V+ +LE K LE LK++ G GN S+P+ L+V +QVECLIDLATD
Sbjct: 3883 KIERARKKLDGANPVKVMTEELESGH--KNKPYLEYLKSMLKGEKGNVRSSKPQY---GLTVREQVECLIDLATD 3952 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6811.16414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6811.16414.1 >prot_M-pyrifera_M_contig6811.16414.1 ID=prot_M-pyrifera_M_contig6811.16414.1|Name=mRNA_M-pyrifera_M_contig6811.16414.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp NSSQAHPPSDAGRKIRNARRKLQGENPAAVVINDLEQNKAVKRNGSLEKLback to top mRNA from alignment at M-pyrifera_M_contig6811:5594..7966- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6811.16414.1 ID=mRNA_M-pyrifera_M_contig6811.16414.1|Name=mRNA_M-pyrifera_M_contig6811.16414.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2373bp|location=Sequence derived from alignment at M-pyrifera_M_contig6811:5594..7966- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6811:5594..7966- >mRNA_M-pyrifera_M_contig6811.16414.1 ID=mRNA_M-pyrifera_M_contig6811.16414.1|Name=mRNA_M-pyrifera_M_contig6811.16414.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig6811:5594..7966- (Macrocystis pyrifera P11B4 male)back to top |