mRNA_M-pyrifera_M_contig6795.16393.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6795.16393.1 vs. uniprot
Match: D7G045_ECTSI (Similar to fidipidine n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G045_ECTSI) HSP 1 Score: 263 bits (672), Expect = 2.490e-80 Identity = 145/198 (73.23%), Postives = 166/198 (83.84%), Query Frame = 2
Query: 773 KRKTVAEGKALLAEGLHRIEAAYEAAEAEREAIALRLSRLRLAVARRQREEDATPGHSELLQYLLRFEELGRHSLERREQLRRCKAERSTMALTTEFLANEARLLETIASGVEEASKGSKAAREAYLRQLTGIVQGVEDSLSNQTRLLDAARSRRHAAEKTQEALSENRKRFLAASRDLALECYRYEALNAHLALMRR 1366
++K EGKAL AEGLHRIEAAYE A AERE A RLSRLRLAVARRQREED GH+ELLQYLLRFEELG+HSLER+EQLRRC+AERST++LT E LA +ARLLETIA GVEEASKG K REAYLRQ+ GIV+ VEDSL +QTRLLD R RRH AE+ Q ++ E+RKRF A +++L+ ECYRYE+LNAHLALMRR
Sbjct: 199 RKKPALEGKALFAEGLHRIEAAYEVAAAEREESAARLSRLRLAVARRQREEDVALGHAELLQYLLRFEELGQHSLERQEQLRRCRAERSTLSLTRELLATQARLLETIAGGVEEASKGGKGVREAYLRQIKGIVESVEDSLEDQTRLLDNVRRRRHVAEELQASVREDRKRFFAGTKELSDECYRYESLNAHLALMRR 396
BLAST of mRNA_M-pyrifera_M_contig6795.16393.1 vs. uniprot
Match: A0A6H5JTA4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTA4_9PHAE) HSP 1 Score: 190 bits (482), Expect = 2.110e-52 Identity = 126/218 (57.80%), Postives = 146/218 (66.97%), Query Frame = 2
Query: 524 GAAVLAKTADDPLAAAPSSPELEADERRKKLGEVVGVGSVAGGGVGRGGAGLPGMLVVGASAGRGGERXXXGEGDNPGIKRREKRKTVAEGKALLAEGLHRIEAAYEAAEAEREAIALRLSRLRLAVARRQREEDATPGHSELLQYLLRFEELGRHSLERREQLRRCKAERSTMALTTEFLANEARLLETIASGVEEASKGSKAAREAYLRQLTGIVQ 1177
G VL K DDPLAA + P+ +E + G +VG AG G + V+ + G XXX P + ++K EGKAL AEGLHRIEAAYE A AERE A RLSRLRLAVARRQREEDA GH+ELLQYLLRFEELG+HSLER+EQLRRC+AER ++LT E LA +ARLLETIA GVEEAS G K REAYLRQ+ GIV+
Sbjct: 166 GGFVLEKAVDDPLAAM-AEPQEHQEEDKSGAGNIVGAVPAAGVGT---------VSVLRTAVVLGXXXXXXXXXXXPAERANHRKKPALEGKALFAEGLHRIEAAYEVAVAEREESAARLSRLRLAVARRQREEDAALGHAELLQYLLRFEELGQHSLERQEQLRRCRAERLMLSLTRELLAKQARLLETIAGGVEEASTGGKGVREAYLRQIKGIVE 373
BLAST of mRNA_M-pyrifera_M_contig6795.16393.1 vs. uniprot
Match: A0A6H5JXP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP6_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.340e-15 Identity = 41/65 (63.08%), Postives = 53/65 (81.54%), Query Frame = 2
Query: 1172 VQGVEDSLSNQTRLLDAARSRRHAAEKTQEALSENRKRFLAASRDLALECYRYEALNAHLALMRR 1366
++ VEDSL +QTRLLD R RRHAAE+ Q ++ E+RKRF A ++L+ ECYRYE+LNAHLALM+R
Sbjct: 3 LKSVEDSLEDQTRLLDNVRRRRHAAEELQASVREDRKRFFAGMKELSDECYRYESLNAHLALMQR 67
BLAST of mRNA_M-pyrifera_M_contig6795.16393.1 vs. uniprot
Match: UPI00062572DA (coiled-coil domain-containing protein 93 isoform X1 n=2 Tax=Athalia rosae TaxID=37344 RepID=UPI00062572DA) HSP 1 Score: 65.1 bits (157), Expect = 1.440e-7 Identity = 52/171 (30.41%), Postives = 88/171 (51.46%), Query Frame = 2
Query: 839 YEAAEAEREAIALRLSRLRLAVARRQREEDATPGHSELLQYLLRFEELGRHSLERREQLRRCKAERSTMALTTEFLANEARLLETIASGVEEASKGSKAAREAYLRQLTGIVQGVEDSLSNQTRLLDAARSRRHAAEKTQEALSENRKRFLAASRDLALECYRYEALNAHL 1351
YE + + + L+L++ A+A R+ D PG SEL QY RF EL + ++ ++ +T+ T +L+ E LL +I EA S + +E +L+Q IV G++ + + + R+RR + + L E ++R++AA R L +EC + EAL A L
Sbjct: 418 YEIQKEKVNQLRLQLAKKNRAIASLTRQLDDVPGRSELTQYQRRFLELYNQVSAKHKETKQYYTLYNTLDDTKLYLSKELTLLNSIQDNYNEAMS-SASGKEQFLKQFEAIVAGIKQNKTKVEKRCADERARRDSLSQQLVTLVEQQRRYVAAVRQLTIECRKNEALLAQL 587
BLAST of mRNA_M-pyrifera_M_contig6795.16393.1 vs. uniprot
Match: A0A026WFZ3_OOCBI (Coiled-coil domain-containing protein 93 n=1 Tax=Ooceraea biroi TaxID=2015173 RepID=A0A026WFZ3_OOCBI) HSP 1 Score: 65.1 bits (157), Expect = 1.440e-7 Identity = 55/170 (32.35%), Postives = 89/170 (52.35%), Query Frame = 2
Query: 851 EAEREAIA---LRLSRLRLAVARRQREEDATPGHSELLQYLLRFEELGRHSLERREQLRRCKAERSTMALTTEFLANEARLLETIASGVEEASKGSKAAREAYLRQLTGIVQGVEDSLSNQTRLLDAARSRRHAAEKTQEALSENRKRFLAASRDLALECYRYEALNAHL 1351
E ++EA+A L+L++ +A R+ D PG SEL QY RF EL + ++ ++ +TM T +L+ E LL +I EA S + +E +L+Q IV GV+ + + + ++RR A + L E +++++AA R L +EC R EAL A L
Sbjct: 421 EEQKEAVARMRLQLAKKNRTIASLTRQLDDVPGRSELTQYQRRFMELYNQVSAKHKETKQYYTLYNTMDDTKLYLSKELTLLNSIQDNYNEAM-ASASGKEQFLKQFENIVAGVKRNKAMVEKRCVDEKNRRDALSRQLVTLVEQQRKYVAAVRQLTIECRRNEALLAQL 589
BLAST of mRNA_M-pyrifera_M_contig6795.16393.1 vs. uniprot
Match: UPI0008404801 (coiled-coil domain-containing protein 93 isoform X1 n=2 Tax=Ceratina calcarata TaxID=156304 RepID=UPI0008404801) HSP 1 Score: 65.1 bits (157), Expect = 1.460e-7 Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = 2
Query: 869 IALRLSRLRLAVARRQREEDATPGHSELLQYLLRFEELGRHSLERREQLRRCKAERSTMALTTEFLANEARLLETIASGVEEASKGSKAAREAYLRQLTGIVQGVEDSLSNQTRLLDAARSRRHAAEKTQEALSENRKRFLAASRDLALECYRYEALNAHL 1351
+ L+L++ A+A R+ D PG SEL QY RF EL + ++ ++ +T+ T +L+ E LL +I EA S +A+E +L+Q IV GV+ + + ++RR A + L E +++++AA R L +EC + EAL A L
Sbjct: 429 VRLQLAKKNRAIASLTRQLDDVPGRSELTQYQRRFMELYNQVSAKHKETKQYYTLYNTLDDTKLYLSKELSLLNSIQDNYNEAM-ASTSAKEQFLKQFEAIVTGVKRNKEKVEKRCGDEKNRRDALSRQLITLIEQQRKYVAAVRQLTIECRKNEALLAQL 588
BLAST of mRNA_M-pyrifera_M_contig6795.16393.1 vs. uniprot
Match: A0A6J1TL23_FRAOC (Coiled-coil domain-containing protein 93 n=3 Tax=Frankliniella occidentalis TaxID=133901 RepID=A0A6J1TL23_FRAOC) HSP 1 Score: 65.1 bits (157), Expect = 1.470e-7 Identity = 52/161 (32.30%), Postives = 82/161 (50.93%), Query Frame = 2
Query: 869 IALRLSRLRLAVARRQREEDATPGHSELLQYLLRFEELGRHSLERREQLRRCKAERSTMALTTEFLANEARLLETIASGVEEASKGSKAAREAYLRQLTGIVQGVEDSLSNQTRLLDAARSRRHAAEKTQEALSENRKRFLAASRDLALECYRYEALNAHL 1351
+ LRL+R A A QR+ D PG +EL QY RF EL + ++ ++ +T++ T ++ E LL++I EA S + RE +++Q GIV+ V+ + + + R RR K Q AL E + ++AA R L +EC + L A L
Sbjct: 445 VRLRLARATRAAASLQRQLDDVPGRAELAQYQRRFLELYSQVAAKHKETKQFYTLYNTLSDTKLYMEKELNLLDSILENYHEALS-SPSMREQFIKQFEGIVENVKQNKMKIEQRRNEERMRRDKLNKQQVALLELERSYVAAVRQLTVECRKNAVLLAQL 604
BLAST of mRNA_M-pyrifera_M_contig6795.16393.1 vs. uniprot
Match: A0A7R9G5S9_TIMSH (Hypothetical protein n=2 Tax=Timema TaxID=61471 RepID=A0A7R9G5S9_TIMSH) HSP 1 Score: 63.5 bits (153), Expect = 1.790e-7 Identity = 53/170 (31.18%), Postives = 87/170 (51.18%), Query Frame = 2
Query: 851 EAEREAI---ALRLSRLRLAVARRQREEDATPGHSELLQYLLRFEELGRHSLERREQLRRCKAERSTMALTTEFLANEARLLETIASGVEEASKGSKAAREAYLRQLTGIVQGVEDSLSNQTRLLDAARSRRHAAEKTQEALSENRKRFLAASRDLALECYRYEALNAHL 1351
E ERE + L L++ ++A QR+ D PG +EL QY RF EL + ++ ++ +T+ T +L E LL +I EA S + +E +++Q IV+G++ + R R RR + ++L E ++R++AA R + +EC R EAL A L
Sbjct: 132 EEERERVHKLRLLLAKGNRSIAALQRQLDEVPGRAELAQYQRRFLELYNQVAAKHKETKQFYTLYNTLDDTKLYLGKELSLLNSILDTYTEAMS-SASGKEQFMKQFDAIVEGIKQNKVKVERRKSEERRRRDQLSQQLQSLVEQQRRYVAAVRQVTIECRRNEALLAQL 300
BLAST of mRNA_M-pyrifera_M_contig6795.16393.1 vs. uniprot
Match: A0A6P3V7I6_BOMIM (Coiled-coil domain-containing protein 93 n=14 Tax=Apinae TaxID=70987 RepID=A0A6P3V7I6_BOMIM) HSP 1 Score: 64.7 bits (156), Expect = 1.920e-7 Identity = 54/170 (31.76%), Postives = 90/170 (52.94%), Query Frame = 2
Query: 851 EAEREAIA---LRLSRLRLAVARRQREEDATPGHSELLQYLLRFEELGRHSLERREQLRRCKAERSTMALTTEFLANEARLLETIASGVEEASKGSKAAREAYLRQLTGIVQGVEDSLSNQTRLLDAARSRRHAAEKTQEALSENRKRFLAASRDLALECYRYEALNAHL 1351
E ++EA+A L+L++ A+A R+ D PG SEL QY RF EL + ++ ++ +T+ T +L+ E LL +I EA S + +E +L+Q IV GV+ + + + ++RR A + L E +++++AA R L +EC + EAL A L
Sbjct: 421 EQQKEALAKVRLQLAKKNRAIASLTRQLDDVPGRSELTQYQRRFMELYNQVSAKHKETKQYYTLYNTLDDTKVYLSKELSLLNSIQDNYNEAM-ASTSGKEQFLKQFDEIVAGVKRNKAKVEKRCADEKNRRDALSRQLVTLIEQQRKYVAAVRQLTIECRKNEALLAQL 589
BLAST of mRNA_M-pyrifera_M_contig6795.16393.1 vs. uniprot
Match: UPI001F5E63D1 (coiled-coil domain-containing protein 93 isoform X1 n=4 Tax=Schistocerca TaxID=7008 RepID=UPI001F5E63D1) HSP 1 Score: 64.7 bits (156), Expect = 1.950e-7 Identity = 56/174 (32.18%), Postives = 87/174 (50.00%), Query Frame = 2
Query: 851 EAEREAIALRLSRLRLAVARR-------QREEDATPGHSELLQYLLRFEELGRHSLERREQLRRCKAERSTMALTTEFLANEARLLETIASGVEEASKGSKAAREAYLRQLTGIVQGVEDSLSNQTRLLDAARSRRHAAEKTQEALSENRKRFLAASRDLALECYRYEALNAHL 1351
E ERE R+ +LRL +A+R QR+ D PG +EL QY RF EL + ++ ++ +T T + + E LL +I EA S A +E +++Q IV+G++ + + R R RR +T L + ++R++AA R L +EC R E L A L
Sbjct: 444 EEERE----RVQKLRLLLAKRNRSIAALQRQLDEVPGRAELAQYQRRFLELYNQVAAKHKETKQFYTLYNTFDDTKLYTSKELTLLNSILDNYTEAMS-SPAGKEQFMKQFDAIVEGIKQNKAKVERRRAEERQRRDRLSQTLLGLVDQQRRYVAAVRQLTIECRRNEVLLAQL 612 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6795.16393.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6795.16393.1 >prot_M-pyrifera_M_contig6795.16393.1 ID=prot_M-pyrifera_M_contig6795.16393.1|Name=mRNA_M-pyrifera_M_contig6795.16393.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=228bp MLVVGASAGRGGERGGEGEGDNPGIKRREKRKTVAEGKALLAEGLHRIEAback to top mRNA from alignment at M-pyrifera_M_contig6795:6510..11028+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6795.16393.1 ID=mRNA_M-pyrifera_M_contig6795.16393.1|Name=mRNA_M-pyrifera_M_contig6795.16393.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4519bp|location=Sequence derived from alignment at M-pyrifera_M_contig6795:6510..11028+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6795:6510..11028+ >mRNA_M-pyrifera_M_contig6795.16393.1 ID=mRNA_M-pyrifera_M_contig6795.16393.1|Name=mRNA_M-pyrifera_M_contig6795.16393.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1368bp|location=Sequence derived from alignment at M-pyrifera_M_contig6795:6510..11028+ (Macrocystis pyrifera P11B4 male)back to top |