mRNA_M-pyrifera_M_contig67820.16364.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig67820.16364.1 vs. uniprot
Match: A0A5A8BXX6_CAFRO (Calpain catalytic domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8BXX6_CAFRO) HSP 1 Score: 92.8 bits (229), Expect = 5.200e-19 Identity = 60/167 (35.93%), Postives = 78/167 (46.71%), Query Frame = 1
Query: 37 RLTGQWVAEKAAGGCHLNSDWLRNPAIELLPS---TFAQRSSFPSSYTLTLSRPPASWRAQVKEDGVGCMMGLYVMTCDQDTTE-----------PRFAD--GREG---------LIAETRFVPQNSVELSVTIDWKALREANKRVLILPATFEPNKVGPFLLEAAS 462
R+ G W AAG C L++DWLRNPA L PS Q + YTLT+ RP W VK DGVG M+GLYV+ + E P D G E L+A+T FVP L + + W +L A R++++ T+ GPF LE S
Sbjct: 747 RVEGAWEGRSAAG-CQLHTDWLRNPAFFLSPSEADAHGQGAGGEVPYTLTIERPAGPWARAVKRDGVGTMVGLYVLAVHEGAPELARLHVRAPGDPPATDPSGHETSPEDLSVALLVAKTTFVPMERASLPLQVRWTSLLGARLRLVVVCCTYGAGFAGPFRLEVES 912
BLAST of mRNA_M-pyrifera_M_contig67820.16364.1 vs. uniprot
Match: A0A5A8CDU7_CAFRO (Calpain catalytic domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CDU7_CAFRO) HSP 1 Score: 92.8 bits (229), Expect = 5.430e-19 Identity = 60/167 (35.93%), Postives = 78/167 (46.71%), Query Frame = 1
Query: 37 RLTGQWVAEKAAGGCHLNSDWLRNPAIELLPS---TFAQRSSFPSSYTLTLSRPPASWRAQVKEDGVGCMMGLYVMTCDQDTTE-----------PRFAD--GREG---------LIAETRFVPQNSVELSVTIDWKALREANKRVLILPATFEPNKVGPFLLEAAS 462
R+ G W AAG C L++DWLRNPA L PS Q + YTLT+ RP W VK DGVG M+GLYV+ + E P D G E L+A+T FVP L + + W +L A R++++ T+ GPF LE S
Sbjct: 1402 RVEGAWEGRSAAG-CQLHTDWLRNPAFFLSPSEADAHGQGAGGEVPYTLTIERPAGPWARAVKRDGVGTMVGLYVLAVHEGAPELARLHVRAPGDPPATDPSGHETSPEDLSVALLVAKTTFVPMERASLPLQVRWTSLLGARLRLVVVCCTYGAGFAGPFRLEVES 1567
BLAST of mRNA_M-pyrifera_M_contig67820.16364.1 vs. uniprot
Match: A0A3L6UPX7_9STRA (calpain_III domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6UPX7_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 4.950e-18 Identity = 55/158 (34.81%), Postives = 83/158 (52.53%), Query Frame = 1
Query: 1 VNVSQLPPRCPQRLTGQWVAEKA--AGGCHLNSDWLRNPAIELLPSTFAQRSSFPSSYTLTLSRPPASWRAQVKEDGVGCMMGLYVMTCDQDTTEPR--FADGREGLIAETRFVPQNSVELSVTIDWKALREANKRVLILPATFEPNKVGPFLLEAAS 462
+ + ++P Q + G+W ++KA AGG HL+++W +NP L P++ T+ L R WRA+ K+D VG MMG Y+ + T E DG+ ET FVP + V +S D N+ +I+PAT+EPNK G FLL ++
Sbjct: 47 MTLDEIPSTMSQTIAGEW-SDKAGSAGGSHLSAEWKKNPKFYLTLKCVR-----PAAVTIDLYRSEFEWRAKCKKDSVGAMMGFYLFQGSKGTRESSTVVVDGKRW--TETDFVPLHHVGIS---DLSLPPVFNESYVIMPATWEPNKCGRFLLSVSA 193
BLAST of mRNA_M-pyrifera_M_contig67820.16364.1 vs. uniprot
Match: A0A418BV11_9STRA (calpain_III domain-containing protein (Fragment) n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418BV11_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.970e-17 Identity = 55/158 (34.81%), Postives = 83/158 (52.53%), Query Frame = 1
Query: 1 VNVSQLPPRCPQRLTGQWVAEKA--AGGCHLNSDWLRNPAIELLPSTFAQRSSFPSSYTLTLSRPPASWRAQVKEDGVGCMMGLYVMTCDQDTTEPR--FADGREGLIAETRFVPQNSVELSVTIDWKALREANKRVLILPATFEPNKVGPFLLEAAS 462
+ + ++P Q + G+W ++KA AGG HL+++W +NP L P++ T+ L R WRA+ K+D VG MMG Y+ + T E DG+ ET FVP + V +S D N+ +I+PAT+EPNK G FLL ++
Sbjct: 126 MTLDEIPSTLSQTIAGEW-SDKAGSAGGSHLSAEWKKNPKFYLTLKCVR-----PAAVTIDLYRSEFEWRAKCKKDSVGAMMGFYLFQGSKGTRESSTVVVDGKRW--TETDFVPLHHVGIS---DLSLPPVFNESYVIMPATWEPNKCGRFLLSVSA 272
BLAST of mRNA_M-pyrifera_M_contig67820.16364.1 vs. uniprot
Match: A0A418CPT4_9STRA (Calpain catalytic domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418CPT4_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.810e-17 Identity = 56/158 (35.44%), Postives = 84/158 (53.16%), Query Frame = 1
Query: 1 VNVSQLPPRCPQRLTGQWVAEKA--AGGCHLNSDWLRNPAIELLPSTFAQRSSFPSSYTLTLSRPPASWRAQVKEDGVGCMMGLYVMTCDQDTTEPR--FADGREGLIAETRFVPQNSVELSVTIDWKALREANKRVLILPATFEPNKVGPFLLEAAS 462
+ + ++P Q + G+W ++KA AGG HL+++W +NP I L P++ T+ L R WRA+ K+D VG MMG Y+ + T E DG+ ET FVP + V +S D N+ +I+PAT+EPNK G FLL ++
Sbjct: 572 MTLDEIPSTMSQTIAGEW-SDKAGSAGGSHLSAEWKKNPKIYLTLKCVR-----PAAVTIDLYRSEFEWRAKCKKDSVGAMMGFYLFQGSKGTRESSTVVVDGKRW--TETDFVPLHHVGIS---DLSLPPVFNESYVIMPATWEPNKCGRFLLSVSA 718
BLAST of mRNA_M-pyrifera_M_contig67820.16364.1 vs. uniprot
Match: A0A5D6XME0_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XME0_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.550e-16 Identity = 55/156 (35.26%), Postives = 83/156 (53.21%), Query Frame = 1
Query: 7 VSQLPPRCPQRLTGQWVAEKAAGGCHLNSDWLRNPAIELLPSTFAQRSSFPSSYTLTLSRPPASWRAQVKEDGVGCMMGLYVM---TCDQDTTEPRFADGREGLIAETRFVPQNSVELSVTIDWKALREA-NKRVLILPATFEPNKVGPFLLEAAS 462
+ +LP Q L G+W E +A GCHL+SDW +NP + L + P+ +TL+R W+A+ K D VG MMG Y+ +D + +GR ET FVP +SV+ + L A N+ +I+PAT++PNK+G F++ S
Sbjct: 881 MDELPKFSTQSLPGEWT-ESSAVGCHLHSDWKKNPKLYL-----HIKGVRPAKVKITLTRSELEWKAKCKRDAVGTMMGFYLFHGQKMARDGSTNIILNGRPW--TETDFVPLHSVQSPPEL---VLPSAFNEPYVIMPATYDPNKLGKFVVSVQS 1025
BLAST of mRNA_M-pyrifera_M_contig67820.16364.1 vs. uniprot
Match: J9ISJ7_9SPIT (Calpain, putative n=2 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9ISJ7_9SPIT) HSP 1 Score: 79.3 bits (194), Expect = 2.600e-14 Identity = 50/164 (30.49%), Postives = 79/164 (48.17%), Query Frame = 1
Query: 1 VNVSQLPPRCPQRLTGQWVAEKAAGGCHLNSD----------WLRNPAIELLPSTFAQRSSFPSSYTLTLSRPPASWRAQVKEDGVGCMMGLYVMTCDQDTTEPRFADGREGLIAETRFVPQNSVELSVTIDWKALREANKRVLILPATFEPNKVGPFLLEAAS 462
V V +L L+G+W ++K+AGGCHL W NP + T P+ +TLSRP +W+ Q+ + VGCM+G YV +Q T+ + +FVP N V +T+D +++P T+EP K+GPF++ A++
Sbjct: 775 VEVQKLEDSRNAVLSGKW-SDKSAGGCHLYDKEYEQKADKFTWTNNPKFHMRFQT-----PEPTQVKITLSRPEKAWKKQIGMNLVGCMIGFYVYPGNQQPTKDCLLNK-----LSQKFVPWNEVSDELTLDGNP-----DGYIVMPTTYEPGKMGPFIISAST 922
BLAST of mRNA_M-pyrifera_M_contig67820.16364.1 vs. uniprot
Match: A0A6A3JIG9_9STRA (Calpain catalytic domain-containing protein n=25 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JIG9_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 5.850e-13 Identity = 49/155 (31.61%), Postives = 78/155 (50.32%), Query Frame = 1
Query: 34 QRLTGQWVAEKAAGGCHLNSDWLRNPAIELLPSTFAQRSSFPSSYTLTLSRPPASWRAQVKEDGVGCMMGLYVM-------------TCDQD---TTEPRFADGREGLIAETRFVPQNSVELSVTIDWKALREANKRVLILPATFEPNKVGPFLL 450
Q + G+W A K+ GGCH++ DW +NP L + P+ +TL+R W+++ + D VG M+G Y+ T D D TT P +GR L +ET FVP ++V + + + +I+PAT+EP ++G F+L
Sbjct: 1022 QSMPGEWTATKS-GGCHMHPDWRQNPKFYL-----QMQGVRPTKVRITLTRSEREWKSRCQRDSVGTMIGFYLFRSGSGKLNRPGDSTADGDSAATTHPIVVNGR--LWSETDFVPLHTVCSPPELVLSSAAKGG--YVIVPATYEPGRLGKFVL 1166
BLAST of mRNA_M-pyrifera_M_contig67820.16364.1 vs. uniprot
Match: A0A6G0XCD7_9STRA (Calpain catalytic domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCD7_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 7.740e-13 Identity = 50/153 (32.68%), Postives = 76/153 (49.67%), Query Frame = 1
Query: 1 VNVSQLPPRCPQRLTGQWVAEKA-AGGCHLNSDWLRNPAIELLPSTFAQRSSFPSSYTLTLSRPPASWRAQVKEDGVGCMMGLYVMTCDQDTTEPR--FADGREGLIAETRFVPQNSVELSVTIDWKALREANKRVLILPATFEPNKVGPFLL 450
+ + +LP Q + G+W +K AGG HL DW +NP + L +S + + L R WR++ K+D VG MMG Y+ + E DG+ ET FVP + + S+T+ N+ +I+PAT+EPN G FL+
Sbjct: 737 LTLEELPNGLAQTIAGEWSDKKGTAGGSHLCPDWKKNPKVYL-----TLKSVRAAEVKIDLYRSEYEWRSKCKKDSVGSMMGFYLFQGTKLNRESSTVVVDGKTW--TETDFVPLHHIAASLTLP----PVFNESYVIMPATWEPNHSGRFLV 878
BLAST of mRNA_M-pyrifera_M_contig67820.16364.1 vs. uniprot
Match: K3W555_GLOUD (calpain_III domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W555_GLOUD) HSP 1 Score: 74.3 bits (181), Expect = 1.020e-12 Identity = 50/152 (32.89%), Postives = 81/152 (53.29%), Query Frame = 1
Query: 7 VSQLPP-RCPQRLTGQWVAEKAAGGCHLNSDWLRNPAIELLPSTFAQRSSFPSSYTLTLSRPPASWRAQVKEDGVGCMMGLYVMTCDQDTTEPR--FADGREGLIAETRFVPQNSVELSVTIDWKALREA-NKRVLILPATFEPNKVGPFLL 450
+ +LP + Q + G+W E A GCHL+S+W +NP + L + P+ +T++R WRA+ K D VG M+G Y+ + + E +GR +ET FVP ++V + L A N+ +I+PAT+EP+K G F++
Sbjct: 218 MDELPTFKSTQSVPGEWT-EATAMGCHLHSEWKKNPKLYL-----HLKGVRPAKVQITVTRSELEWRAKCKRDAVGTMIGFYLFHGQKLSRESSAIIVNGRPW--SETDFVPLHAVHAPQEL---VLPPAFNEPYVIMPATYEPHKTGKFVV 358 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67820.16364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig67820.16364.1 >prot_M-pyrifera_M_contig67820.16364.1 ID=prot_M-pyrifera_M_contig67820.16364.1|Name=mRNA_M-pyrifera_M_contig67820.16364.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=154bp VNVSQLPPRCPQRLTGQWVAEKAAGGCHLNSDWLRNPAIELLPSTFAQRSback to top mRNA from alignment at M-pyrifera_M_contig67820:12..473+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig67820.16364.1 ID=mRNA_M-pyrifera_M_contig67820.16364.1|Name=mRNA_M-pyrifera_M_contig67820.16364.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=462bp|location=Sequence derived from alignment at M-pyrifera_M_contig67820:12..473+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig67820:12..473+ >mRNA_M-pyrifera_M_contig67820.16364.1 ID=mRNA_M-pyrifera_M_contig67820.16364.1|Name=mRNA_M-pyrifera_M_contig67820.16364.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=924bp|location=Sequence derived from alignment at M-pyrifera_M_contig67820:12..473+ (Macrocystis pyrifera P11B4 male)back to top |