mRNA_M-pyrifera_M_contig67774.16350.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig67774.16350.1 vs. uniprot
Match: A0A3P8MCK6_TSUPA (Phage T7 F exclusion suppressor FxsA n=7 Tax=Tsukamurella TaxID=2060 RepID=A0A3P8MCK6_TSUPA) HSP 1 Score: 60.1 bits (144), Expect = 2.550e-8 Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = 1
Query: 37 MVAEFFAASWVIGQVGFGTTLLLVIALGFLGVAVVRWKAAGLLVSTIESATNSSVETTSAIAGRALGLAAGILIAVPGFVSSAFGLILLLTPVRRLAEPFLAARATSWSVPFINRSGPTASSRRGPSGDGPFIDVDIVA 453
+V E A + ++ +GFG +L +I LGV ++R AAG+L + A + A+ A+ AA L+AVPG VS+A GL+LL+ PVR + P +A F+ SG P G G +D D+++
Sbjct: 10 LVVEIAAFAGLVSWLGFGWAVLAIIGATVLGVVMLRRTAAGVL-RDLGRALDGQRSAGPALMDTAILAAAVFLLAVPGVVSTALGLLLLVKPVRAVVRPAVAYVGAKRVASFVEESGLVTVLAGQPRGYGTVVDGDVMS 147
BLAST of mRNA_M-pyrifera_M_contig67774.16350.1 vs. uniprot
Match: A0A138AX29_9ACTN (Uncharacterized protein n=2 Tax=Tsukamurella TaxID=2060 RepID=A0A138AX29_9ACTN) HSP 1 Score: 57.8 bits (138), Expect = 1.790e-7 Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 1
Query: 37 MVAEFFAASWVIGQVGFGTTLLLVIALGFLGVAVVRWKAAGLLVSTIESATNSSVETTSAIAGRALGLAAGILIAVPGFVSSAFGLILLLTPVRRLAEPFLAARATSWSVPFINRSGPTASSRRGPSGDGPFIDVDIVA 453
+V E A + ++ + FG LL++IA +GV ++R AAG+L + A + A+ A+ + L+AVPG VS+A GL+LL+ PVR + P +A F+ SG P G G +D D+V+
Sbjct: 10 IVVEIAAFAGLVAWLNFGWALLVMIAATAIGVLMLRRTAAGVL-RDLGEALDGQRSAGPALMDTAILATSVFLLAVPGVVSTALGLLLLVKPVRAVVRPVVAYVGAKRVASFVEESGLVTVLAGQPRGFGTVVDGDVVS 147
BLAST of mRNA_M-pyrifera_M_contig67774.16350.1 vs. uniprot
Match: A0A6J7PIU1_9ZZZZ (Unannotated protein n=3 Tax=root TaxID=1 RepID=A0A6J7PIU1_9ZZZZ) HSP 1 Score: 57.0 bits (136), Expect = 2.340e-7 Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 1
Query: 43 AEFFAASWVIGQVGFGTTLLLVIALGFLGVAVVRWKAAGLLVSTIESATNSSVETTSAIAGRALGLAAGILIAVPGFVSSAFGLILLLTPVRRLAEPFLAAR 348
AE + A V Q+G T+ +++ LG G V+R G + T S T I G LG AAG+L+ +PGF+S+AFG++LLL P+R L + R
Sbjct: 15 AELYVALQVAHQIGALETVFVLVGLGLFGAWVIRRAGMGAIARTFASLAEGRSPTDDMINGG-LGFAAGLLLFIPGFISAAFGVLLLLPPIRALLRSTIRTR 115
BLAST of mRNA_M-pyrifera_M_contig67774.16350.1 vs. uniprot
Match: UPI001C7D7438 (FxsA family protein n=1 Tax=Tsukamurella sp. TY48 TaxID=2775495 RepID=UPI001C7D7438) HSP 1 Score: 57.0 bits (136), Expect = 3.670e-7 Identity = 47/136 (34.56%), Postives = 68/136 (50.00%), Query Frame = 1
Query: 40 VAEFFAASWVIGQVGFGTTLLLVIALGFLGVAVVRWKAAGLLVSTIESATNSSVETTSAIAGRALGLAAGILIAVPGFVSSAFGLILLLTPVRRLAEPFLAARATSWSVPFINRSGPTASSRRGPSGDGPFIDVDI 447
V E A + ++ +GFG LL VIA +GV ++R AAG+L + +A + A+ AL A+ L+AVPG VS+A GL+LL+ PVR + P A F+ SG P G G +D +
Sbjct: 11 VVEIAAFAGLVAWLGFGWALLTVIAATAIGVLMLRRTAAGVL-RDLGAALDGRKSAGPALMDTALLAASVFLLAVPGVVSTALGLVLLVKPVRAVIRPVAAYVGAKRIAHFVEESGLVTVLAGQPRGFGTVVDGSV 145
BLAST of mRNA_M-pyrifera_M_contig67774.16350.1 vs. uniprot
Match: A0A522NS61_9MYCO (Membrane protein FxsA n=1 Tax=Mycobacterium sp. TaxID=1785 RepID=A0A522NS61_9MYCO) HSP 1 Score: 56.6 bits (135), Expect = 4.890e-7 Identity = 54/164 (32.93%), Postives = 80/164 (48.78%), Query Frame = 1
Query: 1 MFSRSAVAIFIVMVAEFFAASWVIGQVGFGTTLLLVIALGFLGVAVVRWKAAGLLVSTIESATNSSVETTSAIAGRALGLAAGILIAVPGFVSSAFGLILLLTPVRRLAEPFLAARAT----------SWSVPFINRSGPTASSRRGPSGDG----PFIDVDIV 450
M SR + +V +A FA ++ +G+G TLL+++A LG +V A L+ I + E +A AL A +L+ VPG VS+AFGL+LL+ PVR A P L A A S++ F S P +S GDG +ID +++
Sbjct: 1 MVSRLLLIYAVVELAVIFA---LVSTIGWGWTLLVLLATFVLGWGIVAPMAGSHLIRRIGQLRSGLTEPRNAAGDSALVSLAALLVLVPGLVSTAFGLLLLIPPVRSAAAPGLGAMAVRTLQRRMPGISYATAFRADSHPASSPTGAYPGDGRGHGDYIDGEVI 161
BLAST of mRNA_M-pyrifera_M_contig67774.16350.1 vs. uniprot
Match: A0A1A2SRT0_9MYCO (Membrane protein FxsA n=3 Tax=Mycobacterium mantenii TaxID=560555 RepID=A0A1A2SRT0_9MYCO) HSP 1 Score: 55.5 bits (132), Expect = 1.240e-6 Identity = 44/137 (32.12%), Postives = 66/137 (48.18%), Query Frame = 1
Query: 70 IGQVGFGTTLLLVIALGFLGVAVVRWKAAGLLVSTIESATNSSVETTSAIAGRALGLAAGILIAVPGFVSSAFGLILLLTPVRRLAEPFLAARAT----------SWSVPFINRSGPTASSRRGPSGDGPFIDVDIV 450
+ +G+G TLL+++A LG VV A L+ I + E +A AL A +L+ VPG VS+A GL+LL+ PVR P L A A S++ F S P + +G G +ID +++
Sbjct: 21 VSTIGWGWTLLVLLATFLLGWGVVAPMAGSRLIRRIGQLRSGLTEQPAAAGDGALVSLAALLVLVPGLVSTALGLLLLIPPVRSTVRPGLTAMAVRTLQRQMPGLSYASAFRAESYPASYPSGSTAGHGDYIDGEVI 157
BLAST of mRNA_M-pyrifera_M_contig67774.16350.1 vs. uniprot
Match: UPI001EEF6B2C (membrane protein FxsA n=2 Tax=Mycobacterium TaxID=1763 RepID=UPI001EEF6B2C) HSP 1 Score: 54.7 bits (130), Expect = 2.370e-6 Identity = 50/160 (31.25%), Postives = 78/160 (48.75%), Query Frame = 1
Query: 1 MFSRSAVAIFIVMVAEFFAASWVIGQVGFGTTLLLVIALGFLGVAVVRWKAAGLLVSTIESATNSSVETTSAIAGRALGLAAGILIAVPGFVSSAFGLILLLTPVRRLAEPFLAARAT----------SWSVPFINRSGPTASSRRGPSGDGPFIDVDIV 450
M SR + +V +A FA ++ +G+G TLL ++A LG +V A L+ I + + +A AL A +L+ +PG VS+A GL+LL+ PVR +A P L A A S++ F + P AS G G +ID +++
Sbjct: 1 MVSRLLLIYAVVELAVIFA---LVSTIGWGWTLLTLLATFLLGWGIVAPMAGSHLIRRIGQLRSGFAGSRNAAGDGALVSVAALLVLIPGLVSTALGLLLLIPPVRSVAGPGLGAIAVRTLRRQMPGISYATTFRSNPYPAASYPGDARGHGDYIDGEVI 157
BLAST of mRNA_M-pyrifera_M_contig67774.16350.1 vs. uniprot
Match: A0A7K0KMR4_9ACTN (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A7K0KMR4_9ACTN) HSP 1 Score: 54.7 bits (130), Expect = 3.620e-6 Identity = 44/112 (39.29%), Postives = 63/112 (56.25%), Query Frame = 1
Query: 43 AEFFAASWVIGQVGFGTTLLLVIALGFLGVAVVRWKAAGLLVS----TIESAT--NSSVETTSAIAGRALGLA-----AGILIAVPGFVSSAFGLILLLTPVRRLAEPFLAA 345
AE+ AASW+ G +G+G +L++ L +G AVVR + L S T+E + + GR +G A AG+LIAVPG V+SA G+ILL+ PVRR+ + A
Sbjct: 53 AEWCAASWLAGLIGWGGVVLVMACLLVIGSAVVRRAGSSALASLRPVTVEGIVVMPGMTQERMGLVGREVGDAGTKAVAGLLIAVPGLVTSALGMILLIPPVRRVVRTKVGA 164
BLAST of mRNA_M-pyrifera_M_contig67774.16350.1 vs. uniprot
Match: UPI0003017389 (FxsA family protein n=1 Tax=Tsukamurella sp. 1534 TaxID=1151061 RepID=UPI0003017389) HSP 1 Score: 53.9 bits (128), Expect = 4.450e-6 Identity = 42/116 (36.21%), Postives = 61/116 (52.59%), Query Frame = 1
Query: 40 VAEFFAASWVIGQVGFGTTLLLVIALGFLGVAVVRWKAAGLLVSTIESATNSSVETTSAIAGRALGLAAGILIAVPGFVSSAFGLILLLTPVRRLAEPFLAARATSWSVPFINRSG 387
V E A + ++ +GFG LL +IA +GV ++R AAG+L + A + A+ A+ A L+AVPG VS+A GL+LL+ PVR L P +A F+ SG
Sbjct: 11 VVEIAAFAGLVAWLGFGWALLTIIAATAIGVLMLRRTAAGVL-QDLGEALDGQRSAGPALMDTAILAGAVFLLAVPGVVSTALGLLLLVKPVRALVRPAVAYVGAKRVARFVEESG 125
BLAST of mRNA_M-pyrifera_M_contig67774.16350.1 vs. uniprot
Match: A0A1A2A3E7_9MYCO (Membrane protein FxsA n=2 Tax=Mycobacterium TaxID=1763 RepID=A0A1A2A3E7_9MYCO) HSP 1 Score: 53.5 bits (127), Expect = 6.450e-6 Identity = 47/133 (35.34%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 70 IGQVGFGTTLLLVIALGFLGVAVVRWKAAGLLVSTIESATNSSVETTSAIAGRALGLAAGILIAVPGFVSSAFGLILLLTPVRRLAEPFLAA---RATSWSVPFINRSGPTASS-RRGPSGDGP--FIDVDIV 450
+ VG+G TLL ++A L V+ A LV + + SA++ + A +LI VPG V++A GL+LL+ P+R+LA P LAA R +P I + + RRG GDGP +ID ++V
Sbjct: 21 VSTVGWGWTLLALLATSLLAWGVLAPMAGSQLVRQLRQLRSDP----SALSDGTMVTLAAVLILVPGLVTTALGLLLLVPPIRKLARPGLAALGVRGLRRRMPLITDARLFGTDGRRGYPGDGPADYIDGEVV 149 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67774.16350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig67774.16350.1 >prot_M-pyrifera_M_contig67774.16350.1 ID=prot_M-pyrifera_M_contig67774.16350.1|Name=mRNA_M-pyrifera_M_contig67774.16350.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=151bp MFSRSAVAIFIVMVAEFFAASWVIGQVGFGTTLLLVIALGFLGVAVVRWKback to top mRNA from alignment at M-pyrifera_M_contig67774:746..1198+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig67774.16350.1 ID=mRNA_M-pyrifera_M_contig67774.16350.1|Name=mRNA_M-pyrifera_M_contig67774.16350.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=453bp|location=Sequence derived from alignment at M-pyrifera_M_contig67774:746..1198+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig67774:746..1198+ >mRNA_M-pyrifera_M_contig67774.16350.1 ID=mRNA_M-pyrifera_M_contig67774.16350.1|Name=mRNA_M-pyrifera_M_contig67774.16350.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=906bp|location=Sequence derived from alignment at M-pyrifera_M_contig67774:746..1198+ (Macrocystis pyrifera P11B4 male)back to top |