mRNA_M-pyrifera_M_contig67774.16349.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig67774.16349.1
Unique NamemRNA_M-pyrifera_M_contig67774.16349.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig67774.16349.1 vs. uniprot
Match: A0A7Y2DCE8_9ACTN (L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DCE8_9ACTN)

HSP 1 Score: 265 bits (677), Expect = 4.150e-84
Identity = 148/214 (69.16%), Postives = 165/214 (77.10%), Query Frame = 1
Query:   16 RPPSVDRLARSLKATGLPRPLLVDLARRLIAQDRTEHAEAEAARLQRSFLSPVINGTGVLLHTNLGRAPLAVEQSDTYSNLEFDLETGERGSRQRGIGDLLAAATGAEAAMVVNNCASAVMLALAALATGKHAAVSRGELVEIGGGFRIPDVMAQSGAHLVEVGTTNRTRLADFQRAI-DTHDDLEVALHVHQSNYEIVGFTEAVSVAELATLD 654
            RPPSVD LARSL+ TGLP PLLVD AR  IA    E A AEA  L RS L PVIN TGVLLHTNLGRAP     +  Y NLE DL TG+RGSRQ     LLA A GAEAA+VVNNCA+AVML LAALA  +  AVSRGELVEIGGGFR+P+VM QSGA L+EVGTTNRTRLAD++RA+ D  +D+ + + VHQSNY+IVGFTEAVS AELATLD
Sbjct:   13 RPPSVDALARSLRDTGLPHPLLVDAARAAIASGDPERARAEAQDLARSMLQPVINATGVLLHTNLGRAPWPATDAGRYRNLELDLATGDRGSRQAHAPTLLARACGAEAAIVVNNCAAAVMLVLAALARDRAVAVSRGELVEIGGGFRVPEVMQQSGARLLEVGTTNRTRLADYERAVADAANDVALVMQVHQSNYKIVGFTEAVSTAELATLD 226          
BLAST of mRNA_M-pyrifera_M_contig67774.16349.1 vs. uniprot
Match: A0A7K2BRY4_9ACTN (L-seryl-tRNA(Sec) selenium transferase n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2BRY4_9ACTN)

HSP 1 Score: 263 bits (672), Expect = 7.750e-83
Identity = 150/213 (70.42%), Postives = 162/213 (76.06%), Query Frame = 1
Query:   16 RPPSVDRLARSLKATGLPRPLLVDLARRLIAQDRTEHAEAEAARLQRSFLSPVINGTGVLLHTNLGRAPLAVEQSDTYSNLEFDLETGERGSRQRGIGDLLAAATGAEAAMVVNNCASAVMLALAALATGKHAAVSRGELVEIGGGFRIPDVMAQSGAHLVEVGTTNRTRLADFQRAI-DTHDDLEVALHVHQSNYEIVGFTEAVSVAELATL 651
            RPPSVDRLARSL  TGLP  LLVD AR  +A      A A A R++R  LSPVINGTGVLLHTNLGRAPLA  QS  YSNLE DLETGERG RQ G   LLA A GAEAAM VNNCASAVML LAALA G+ A VSRGELVEIGGGFR+PDVMA SGA LVEVGTTNRTR ADF  A+ D  +D+ V + VHQSN+ +VG+TEA   AELA L
Sbjct:   54 RPPSVDRLARSLAGTGLPHALLVDAARAAVAAGDPGSAGARAERIRRRLLSPVINGTGVLLHTNLGRAPLAWSQSAGYSNLELDLETGERGDRQAGAPALLARACGAEAAMAVNNCASAVMLVLAALAEGRDAVVSRGELVEIGGGFRVPDVMAWSGARLVEVGTTNRTRRADFAAAVADGANDVAVVVQVHQSNFRVVGYTEAPRTAELAGL 266          
BLAST of mRNA_M-pyrifera_M_contig67774.16349.1 vs. uniprot
Match: A0A6B1EGF5_9ACTN (L-seryl-tRNA(Sec) selenium transferase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EGF5_9ACTN)

HSP 1 Score: 259 bits (661), Expect = 9.500e-82
Identity = 146/213 (68.54%), Postives = 161/213 (75.59%), Query Frame = 1
Query:   16 RPPSVDRLARSLKATGLPRPLLVDLARRLIAQDRTEHAEAEAARLQRSFLSPVINGTGVLLHTNLGRAPLAVEQSDTYSNLEFDLETGERGSRQRGIGDLLAAATGAEAAMVVNNCASAVMLALAALATGKHAAVSRGELVEIGGGFRIPDVMAQSGAHLVEVGTTNRTRLADFQRAI-DTHDDLEVALHVHQSNYEIVGFTEAVSVAELATL 651
            RPPSVDRLARSL ATGLP PLLVD AR  IA    + A A A  L R  L+PVIN TGVLLHTNLGRAP A  QS  YSNLE DL+TGERG RQ G  DLLA A GAEAAM VNNCA+AVML LAALA G+ A VSRGELVEIGGGFR+PDVMA SGA LVEVGTTNRTR  D+  A+ D  +D+   + VH+SN+ +VGFTEA   AELA+L
Sbjct:   13 RPPSVDRLARSLAATGLPHPLLVDAARAAIAAGDPDSAPARARTLHRRLLTPVINATGVLLHTNLGRAPQAWSQSARYSNLELDLDTGERGDRQTGAPDLLARACGAEAAMAVNNCAAAVMLVLAALAEGRDAVVSRGELVEIGGGFRVPDVMAWSGARLVEVGTTNRTRRDDYVAAVSDPVNDVAAVVQVHRSNFRVVGFTEAPRTAELASL 225          
BLAST of mRNA_M-pyrifera_M_contig67774.16349.1 vs. uniprot
Match: A0A6B0WMD8_9ACTN (L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WMD8_9ACTN)

HSP 1 Score: 258 bits (660), Expect = 1.310e-81
Identity = 144/213 (67.61%), Postives = 163/213 (76.53%), Query Frame = 1
Query:   16 RPPSVDRLARSLKATGLPRPLLVDLARRLIAQDRTEHAEAEAARLQRSFLSPVINGTGVLLHTNLGRAPLAVEQSDTYSNLEFDLETGERGSRQRGIGDLLAAATGAEAAMVVNNCASAVMLALAALATGKHAAVSRGELVEIGGGFRIPDVMAQSGAHLVEVGTTNRTRLADFQRAI-DTHDDLEVALHVHQSNYEIVGFTEAVSVAELATL 651
            RPPSVDRLARSL  TGLP  LLVD AR  +A      A A A R++R  L+PVINGTGVLLHTNLGRAPLA  Q   YSNLE DL++GERG RQ G   LLA A GAEAAM VNNCA+AVML LAALA+G+ A VSRGELVEIGGGFR+PDVMA SGA LVEVGTTNRTR AD+  A+ D+ +D+ V + VHQSN+ +VG+TEA   AELA L
Sbjct:    6 RPPSVDRLARSLAGTGLPHALLVDAARAAVAAGDPASAGARAERIRRRLLTPVINGTGVLLHTNLGRAPLAWSQGADYSNLELDLDSGERGDRQTGAPALLARACGAEAAMAVNNCAAAVMLVLAALASGRDAVVSRGELVEIGGGFRVPDVMAWSGARLVEVGTTNRTRRADYAAAVADSANDVAVVVQVHQSNFRVVGYTEAPRTAELADL 218          
BLAST of mRNA_M-pyrifera_M_contig67774.16349.1 vs. uniprot
Match: A0A538D9E2_9ACTN (L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538D9E2_9ACTN)

HSP 1 Score: 255 bits (652), Expect = 2.840e-80
Identity = 140/219 (63.93%), Postives = 164/219 (74.89%), Query Frame = 1
Query:    7 MTTRPPSVDRLARSLKATGLPRPLLVDLARRLIAQDRTE----HAEAEAARLQRSFLSPVINGTGVLLHTNLGRAPLAVEQSDTYSNLEFDLETGERGSRQRGIGDLLAAATGAEAAMVVNNCASAVMLALAALATGKHAAVSRGELVEIGGGFRIPDVMAQSGAHLVEVGTTNRTRLADFQRAIDTHDDLEVALHVHQSNYEIVGFTEAVSVAELATL 651
            M  RPPSVDRLARSL  TGLP PLLVD+ARR IA         HA A+A+ + R+ L PV+N TGVLLHTNLGRAP A    + Y+NLE DL TGERGSR      L+A A  AEAA++VNNCA+AV+L LAALA G+ A VSRGELVEIGGGFR+P+VMAQSGA LVEVGTTNRTR ADF+RAI  H D+ + + VH+SNY IVGFTE+ +  +LA L
Sbjct:   19 MAERPPSVDRLARSLVDTGLPHPLLVDVARRAIATGDPSMVEAHARADASAIARTLLQPVVNATGVLLHTNLGRAPYAPALYEGYTNLELDLATGERGSRHAHAASLIARACAAEAAIIVNNCAAAVLLVLAALAHGRGAVVSRGELVEIGGGFRVPEVMAQSGARLVEVGTTNRTRRADFERAIAEHSDIALVMQVHRSNYRIVGFTESPAAHDLAAL 237          
BLAST of mRNA_M-pyrifera_M_contig67774.16349.1 vs. uniprot
Match: A0A6G0A9H8_9ACTN (L-seryl-tRNA(Sec) selenium transferase n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A9H8_9ACTN)

HSP 1 Score: 254 bits (648), Expect = 5.790e-80
Identity = 142/210 (67.62%), Postives = 161/210 (76.67%), Query Frame = 1
Query:   16 RPPSVDRLARSLKATGLPRPLLVDLARRLIAQDRTEHAEAEAARLQRSFLSPVINGTGVLLHTNLGRAPLAVEQSDTYSNLEFDLETGERGSRQRGIGDLLAAATGAEAAMVVNNCASAVMLALAALATGKHAAVSRGELVEIGGGFRIPDVMAQSGAHLVEVGTTNRTRLADFQRAIDTHDDLEVALHVHQSNYEIVGFTEAVSVAELA 645
            RPPSVD LARSL  TGLP PLLV++AR  IA DR   A A AA  +R  L PV+N TGVLLHTNLGRAPL      TY+NLE DLETG+RGSRQ     LLAAATGAE+AMVVNNCA+AV+L LAALA G+  AVSR ELVEIGGGFR+P+VMAQSGA L+EVGTTNRTR  DF RA+  HD   + L VHQSNY IVGFTE+V V +++
Sbjct:    2 RPPSVDSLARSLSDTGLPHPLLVEVAREAIAADRVSEAHALAAVRRRRLLVPVVNATGVLLHTNLGRAPLCHVPPLTYTNLELDLETGKRGSRQERTASLLAAATGAESAMVVNNCAAAVLLVLAALARGRPVAVSRSELVEIGGGFRVPEVMAQSGARLLEVGTTNRTRRDDFGRAVAEHDPA-LLLKVHQSNYRIVGFTESVPVRDMS 210          
BLAST of mRNA_M-pyrifera_M_contig67774.16349.1 vs. uniprot
Match: A0A7Y2NA55_9ACTN (L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2NA55_9ACTN)

HSP 1 Score: 252 bits (643), Expect = 4.470e-79
Identity = 136/212 (64.15%), Postives = 163/212 (76.89%), Query Frame = 1
Query:   16 RPPSVDRLARSLKATGLPRPLLVDLARRLIAQDRTEHAEAEAARLQRSFLSPVINGTGVLLHTNLGRAPLAVEQSDTYSNLEFDLETGERGSRQRGIGDLLAAATGAEAAMVVNNCASAVMLALAALATGKHAAVSRGELVEIGGGFRIPDVMAQSGAHLVEVGTTNRTRLADFQRAIDTHDDLEVALHVHQSNYEIVGFTEAVSVAELATL 651
            RPPSVD LARSL+++GLP PL V++AR  IA+DR +  E  A   +R  L PVINGTG LLHTNLGR+P+ V     Y+N+E DL TG+RGSRQR IGDL   A GAE A+VVNNCA+A++L LAALA G+ AAVSRGELVEIGG FR+PDVM QSGA L+EVGTTNRTR++DF+ A  T  D+ + L VHQSNY I GF+E  +VAELATL
Sbjct:    5 RPPSVDALARSLESSGLPHPLRVEVARHAIAEDRVQQVEGLARERRRRLLIPVINGTGTLLHTNLGRSPVTVNSPAAYANVELDLTTGQRGSRQRAIGDLADPAFGAEDAIVVNNCAAALLLVLAALAPGRGAAVSRGELVEIGGAFRVPDVMRQSGAQLIEVGTTNRTRISDFRTAA-TATDMALVLSVHQSNYRISGFSEQTTVAELATL 215          
BLAST of mRNA_M-pyrifera_M_contig67774.16349.1 vs. uniprot
Match: A0A2D6PE02_9ACTN (L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6PE02_9ACTN)

HSP 1 Score: 251 bits (641), Expect = 9.190e-79
Identity = 148/222 (66.67%), Postives = 163/222 (73.42%), Query Frame = 1
Query:   16 RPPSVDRLARSLKATGLPRPLLVDLARRLIAQDRTEHAEAEAARLQ----RSFLSPVINGTGVLLHTNLGRAPLAVEQSDT-YSNLEFDLETGERGSRQRGIGDLLAAATGAEAAMVVNNCASAVMLALAALATGKHAAVSRGELVEIGGGFRIPDVMAQSGAHLVEVGTTNRTRLADFQRAIDTH-DDLEVALHVHQSNYEIVGFTEAVSVAELATLDATV 663
            RPPSVDRLARSL  TGLP PLLVD AR+ IA D     EA A  L     R FL+ V+N TGVLLHTNLGRAP      DT YS LEFDL TG+RGSRQ     LLA A GAEAA+VVNNCASAV+L LAALA G+ A VSRGELVEIGGGFRIPDVMAQSGAHL+EVGTTNRTRL DF  A+    DD  + L+VH+SNY I GFTE+V V+E+A L   V
Sbjct:    5 RPPSVDRLARSLADTGLPHPLLVDAARQAIADDEPATVEARARDLAGSMGRHFLTGVVNATGVLLHTNLGRAPWGTTVDDTRYSTLEFDLSTGDRGSRQDRTPALLARACGAEAAIVVNNCASAVLLVLAALAEGRGAVVSRGELVEIGGGFRIPDVMAQSGAHLIEVGTTNRTRLEDFASAVAAAGDDAALILNVHRSNYRIEGFTESVDVSEMAGLGVPV 226          
BLAST of mRNA_M-pyrifera_M_contig67774.16349.1 vs. uniprot
Match: A0A2E1WQE2_9ACTN (L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E1WQE2_9ACTN)

HSP 1 Score: 250 bits (638), Expect = 2.080e-78
Identity = 138/221 (62.44%), Postives = 161/221 (72.85%), Query Frame = 1
Query:    1 LFMTTRPPSVDRLARSLKATGLPRPLLVDLARRLIAQDRTEHAEAEAARLQRSFLSPVINGTGVLLHTNLGRAPLAVEQSDTYSNLEFDLETGERGSRQRGIGDLLAAATGAEAAMVVNNCASAVMLALAALATGKHAAVSRGELVEIGGGFRIPDVMAQSGAHLVEVGTTNRTRLADFQRAIDTHDDLEVALHVHQSNYEIVGFTEAVSVAELATLDATV 663
            + ++ RPPSVD LARSL    LP PLLVD AR  I+  + E A  EA RLQR+ L P INGTGVLLHTNLGRAPLA  Q    +NLEFDL+TG RGSR     +L+   TGA+AA++VNNC++AV L LAALA G+  AVSRGELVEIGGGFR+PDVM +SGA LVEVGTTNRTRLAD++ A +TH+   + L VH SNY I GFTE  SV  LATL   V
Sbjct:    1 MLISVRPPSVDSLARSLSDIDLPPPLLVDAARTAISNGQPESAREEAIRLQRALLGPAINGTGVLLHTNLGRAPLAYSQPAKSTNLEFDLDTGTRGSRNHHAANLICRLTGADAAVIVNNCSAAVTLVLAALARGRAVAVSRGELVEIGGGFRVPDVMTESGARLVEVGTTNRTRLADYKNAQETHE-AALLLKVHPSNYRITGFTEETSVKALATLQVPV 220          
BLAST of mRNA_M-pyrifera_M_contig67774.16349.1 vs. uniprot
Match: A0A381T9N5_9ZZZZ (Uncharacterized protein (Fragment) n=2 Tax=marine metagenome TaxID=408172 RepID=A0A381T9N5_9ZZZZ)

HSP 1 Score: 245 bits (625), Expect = 2.350e-78
Identity = 147/222 (66.22%), Postives = 164/222 (73.87%), Query Frame = 1
Query:   16 RPPSVDRLARSLKATGLPRPLLVDLARRLIAQDRTEHAEAEA----ARLQRSFLSPVINGTGVLLHTNLGRAPLAVEQSD--TYSNLEFDLETGERGSRQRGIGDLLAAATGAEAAMVVNNCASAVMLALAALATGKHAAVSRGELVEIGGGFRIPDVMAQSGAHLVEVGTTNRTRLADFQRAIDTHDDLEVALHVHQSNYEIVGFTEAVSVAELATLDATV 663
            RPPSVDR+AR+L  TGLP PLLVD AR  +A    E AE  A    A   R+ L  VIN TGVLLHTNLGRAPLA    D   ++NLEFDL +G RGSRQ     LLA A GAEAAMVVNNCASAV LALAALATG+  AVSRGELVEIGGGFRIP+VMAQSGA LVEVGTTNRTR +DF+ A+ +   + +AL VH+SNY IVGFTEAV VAE+A L   V
Sbjct:   12 RPPSVDRIARALTDTGLPHPLLVDAARAAVAAGDPEGAEDRARAVTALTARNLLVEVINATGVLLHTNLGRAPLAAPTGDGRRFTNLEFDLASGSRGSRQDRAARLLARACGAEAAMVVNNCASAVTLALAALATGRGVAVSRGELVEIGGGFRIPEVMAQSGARLVEVGTTNRTRQSDFEAAVAS-GGVALALKVHRSNYRIVGFTEAVGVAEMAGLGVPV 232          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67774.16349.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2DCE8_9ACTN4.150e-8469.16L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Aci... [more]
A0A7K2BRY4_9ACTN7.750e-8370.42L-seryl-tRNA(Sec) selenium transferase n=4 Tax=Aci... [more]
A0A6B1EGF5_9ACTN9.500e-8268.54L-seryl-tRNA(Sec) selenium transferase n=2 Tax=Aci... [more]
A0A6B0WMD8_9ACTN1.310e-8167.61L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Aci... [more]
A0A538D9E2_9ACTN2.840e-8063.93L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Act... [more]
A0A6G0A9H8_9ACTN5.790e-8067.62L-seryl-tRNA(Sec) selenium transferase n=2 Tax=Bac... [more]
A0A7Y2NA55_9ACTN4.470e-7964.15L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Aci... [more]
A0A2D6PE02_9ACTN9.190e-7966.67L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Aci... [more]
A0A2E1WQE2_9ACTN2.080e-7862.44L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Aci... [more]
A0A381T9N5_9ZZZZ2.350e-7866.22Uncharacterized protein (Fragment) n=2 Tax=marine ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67774contigM-pyrifera_M_contig67774:2..664 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score233.0
Seed ortholog evalue1.3e-58
Seed eggNOG ortholog1313172.YM304_38220
Preferred nameselA
KEGG rclassRC01246
KEGG koko:K01042
KEGG ReactionR08219
KEGG Pathwayko00450,ko00970,map00450,map00970
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004125,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0019752,GO:0019842,GO:0030170,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0090304,GO:0097056,GO:0097159,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
EggNOG free text desc.Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis
EggNOG OGs2HFGK@201174,COG1921@1,COG1921@2
EC2.9.1.1
COG Functional cat.E
BiGG ReactioniECP_1309.ECP_3693,iSbBS512_1146.SbBS512_E4006
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size663
Cds size657
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816568.019048-CDS-M-pyrifera_M_contig67774:1..6581622816568.019048-CDS-M-pyrifera_M_contig67774:1..658Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67774 2..658 -
1692278051.4342515-CDS-M-pyrifera_M_contig67774:1..6581692278051.4342515-CDS-M-pyrifera_M_contig67774:1..658Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67774 2..658 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816568.034815-UTR-M-pyrifera_M_contig67774:658..6641622816568.034815-UTR-M-pyrifera_M_contig67774:658..664Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig67774 659..664 -
1692278051.4503427-UTR-M-pyrifera_M_contig67774:658..6641692278051.4503427-UTR-M-pyrifera_M_contig67774:658..664Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig67774 659..664 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67774.16349.1prot_M-pyrifera_M_contig67774.16349.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig67774 2..658 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig67774.16349.1

>prot_M-pyrifera_M_contig67774.16349.1 ID=prot_M-pyrifera_M_contig67774.16349.1|Name=mRNA_M-pyrifera_M_contig67774.16349.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=219bp
MTTRPPSVDRLARSLKATGLPRPLLVDLARRLIAQDRTEHAEAEAARLQR
SFLSPVINGTGVLLHTNLGRAPLAVEQSDTYSNLEFDLETGERGSRQRGI
GDLLAAATGAEAAMVVNNCASAVMLALAALATGKHAAVSRGELVEIGGGF
RIPDVMAQSGAHLVEVGTTNRTRLADFQRAIDTHDDLEVALHVHQSNYEI
VGFTEAVSVAELATLDATV
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mRNA from alignment at M-pyrifera_M_contig67774:2..664-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig67774.16349.1 ID=mRNA_M-pyrifera_M_contig67774.16349.1|Name=mRNA_M-pyrifera_M_contig67774.16349.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=663bp|location=Sequence derived from alignment at M-pyrifera_M_contig67774:2..664- (Macrocystis pyrifera P11B4 male)
CTGTTCATGACCACTCGCCCCCCTTCGGTCGACCGTCTCGCTCGCTCACT CAAAGCGACCGGACTCCCCCGCCCCCTGCTCGTCGACCTGGCCCGACGCC TCATCGCGCAGGATCGCACCGAGCACGCCGAGGCCGAAGCGGCGCGCCTC CAGCGCTCGTTCCTCTCGCCGGTCATCAACGGCACGGGCGTCCTGCTGCA CACCAATCTCGGACGGGCGCCGCTGGCGGTCGAACAATCCGACACCTACT CCAACCTGGAGTTCGACCTCGAGACCGGCGAACGCGGGAGCCGCCAACGA GGGATCGGTGATCTCCTGGCTGCCGCCACCGGCGCCGAAGCCGCCATGGT CGTCAACAACTGTGCATCGGCCGTGATGCTCGCACTGGCTGCGTTGGCCA CCGGCAAACATGCCGCCGTGAGCCGGGGCGAGCTCGTCGAGATCGGGGGA GGCTTCCGCATCCCCGACGTGATGGCACAGTCCGGGGCCCACCTGGTCGA GGTCGGCACCACCAACCGCACACGTCTGGCCGACTTCCAGCGGGCGATCG ACACCCACGACGATCTCGAAGTGGCACTACACGTCCATCAGAGCAACTAC GAGATCGTGGGATTCACCGAGGCCGTCAGCGTGGCCGAGCTCGCGACACT CGATGCCACCGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig67774:2..664-

>mRNA_M-pyrifera_M_contig67774.16349.1 ID=mRNA_M-pyrifera_M_contig67774.16349.1|Name=mRNA_M-pyrifera_M_contig67774.16349.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1314bp|location=Sequence derived from alignment at M-pyrifera_M_contig67774:2..664- (Macrocystis pyrifera P11B4 male)
ATGACCACTCGCCCCCCTTCGGTCGACCGTCTCGCTCGCTCACTCAAAGC
GACCGGACTCCCCCGCCCCCTGCTCGTCGACCTGGCCCGACGCCTCATCG
CGCAGGATCGCACCGAGCACGCCGAGGCCGAAGCGGCGCGCCTCCAGCGC
TCGTTCCTCTCGCCGGTCATCAACGGCACGGGCGTCCTGCTGCACACCAA
TCTCGGACGGGCGCCGCTGGCGGTCGAACAATCCGACACCTACTCCAACC
TGGAGTTCGACCTCGAGACCGGCGAACGCGGGAGCCGCCAACGAGGGATC
GGTGATCTCCTGGCTGCCGCCACCGGCGCCGAAGCCGCCATGGTCGTCAA
CAACTGTGCATCGGCCGTGATGCTCGCACTGGCTGCGTTGGCCACCGGCA
AACATGCCGCCGTGAGCCGGGGCGAGCTCGTCGAGATCGGGGGAGGCTTC
CGCATCCCCGACGTGATGGCACAGTCCGGGGCCCACCTGGTCGAGGTCGG
CACCACCAACCGCACACGTCTGGCCGACTTCCAGCGGGCGATCGACACCC
ACGACGATCTCGAAGTGGCACTACACGTCCATCAGAGCAACTACGAGATC
GTGGGATTCACCGAGGCCGTCAGCGTGGCCGAGCTCGCGACACTCGATGC
CACCGTCATGACCACTCGCCCCCCTTCGGTCGACCGTCTCGCTCGCTCAC
TCAAAGCGACCGGACTCCCCCGCCCCCTGCTCGTCGACCTGGCCCGACGC
CTCATCGCGCAGGATCGCACCGAGCACGCCGAGGCCGAAGCGGCGCGCCT
CCAGCGCTCGTTCCTCTCGCCGGTCATCAACGGCACGGGCGTCCTGCTGC
ACACCAATCTCGGACGGGCGCCGCTGGCGGTCGAACAATCCGACACCTAC
TCCAACCTGGAGTTCGACCTCGAGACCGGCGAACGCGGGAGCCGCCAACG
AGGGATCGGTGATCTCCTGGCTGCCGCCACCGGCGCCGAAGCCGCCATGG
TCGTCAACAACTGTGCATCGGCCGTGATGCTCGCACTGGCTGCGTTGGCC
ACCGGCAAACATGCCGCCGTGAGCCGGGGCGAGCTCGTCGAGATCGGGGG
AGGCTTCCGCATCCCCGACGTGATGGCACAGTCCGGGGCCCACCTGGTCG
AGGTCGGCACCACCAACCGCACACGTCTGGCCGACTTCCAGCGGGCGATC
GACACCCACGACGATCTCGAAGTGGCACTACACGTCCATCAGAGCAACTA
CGAGATCGTGGGATTCACCGAGGCCGTCAGCGTGGCCGAGCTCGCGACAC
TCGATGCCACCGTC
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