mRNA_M-pyrifera_M_contig6772.16342.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6772.16342.1 vs. uniprot
Match: D7FGP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGP8_ECTSI) HSP 1 Score: 137 bits (346), Expect = 5.980e-36 Identity = 58/84 (69.05%), Postives = 73/84 (86.90%), Query Frame = 1
Query: 1 DRARRVQREMMSMIRNPHEAFEVLPSDKDLCFWKAILTGPESTPYKGGCWMLSLYFPPSYPSVAPDIRFITPIQHCNINAHGRV 252
+R RRVQREMM ++NPH+AFEV PSD+++ FWK ++ GP STPY+ GCWMLS++FPP YPSVAP +RFITPI+HCNIN+HGRV
Sbjct: 545 ERQRRVQREMMDWMKNPHQAFEVFPSDENMHFWKVLVHGPASTPYREGCWMLSMFFPPGYPSVAPKVRFITPIRHCNINSHGRV 628
BLAST of mRNA_M-pyrifera_M_contig6772.16342.1 vs. uniprot
Match: A0A0G4HFP5_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HFP5_9ALVE) HSP 1 Score: 105 bits (261), Expect = 1.840e-24 Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 1
Query: 10 RRVQREMMSMIRNPHEAFEVLPSDKDLCFWKAILTGPESTPYKGGCWMLSLYFPPSYPSVAPDIRFITPIQHCNINAHGRV 252
RR+ EM + R PH +LPS +DL FWK ++TGPE TPY GG W+ + FPP +P+ AP++RF+TPI HCN+N HGR+
Sbjct: 1863 RRLALEMKRLQREPHPNIRILPSSEDLTFWKLLVTGPEGTPYGGGNWLCYVSFPPDFPARAPEVRFVTPILHCNVNRHGRI 1943
BLAST of mRNA_M-pyrifera_M_contig6772.16342.1 vs. uniprot
Match: A0A813LMK5_POLGL (Hypothetical protein (Fragment) n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813LMK5_POLGL) HSP 1 Score: 103 bits (256), Expect = 1.940e-24 Identity = 46/86 (53.49%), Postives = 61/86 (70.93%), Query Frame = 1
Query: 4 RARRVQREMMSMIRNPHEAFEVLP---SDKDLCFWKAILTGPESTPYKGGCWMLSLYFPPSYPSVAPDIRFITPIQHCNINAHGRV 252
R RR+ REM ++R PH A++V P +D C W+ I+ GP +PY GGCW+L FPP YP+ APD+RF+T I+HCN+NAHGRV
Sbjct: 132 RVRRLAREMGRLLREPHMAYDVFPGVGADALSC-WRVIMEGPADSPYAGGCWLLYALFPPEYPNKAPDVRFVTRIRHCNVNAHGRV 216
BLAST of mRNA_M-pyrifera_M_contig6772.16342.1 vs. uniprot
Match: A0A7S0AFI0_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0AFI0_9DINO) HSP 1 Score: 104 bits (260), Expect = 2.490e-24 Identity = 45/83 (54.22%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 4 RARRVQREMMSMIRNPHEAFEVLPSDKDLCFWKAILTGPESTPYKGGCWMLSLYFPPSYPSVAPDIRFITPIQHCNINAHGRV 252
R RR E+ + +PH + EV PS+ DL FWK +L GPE TPY+GG W+L + PP YP+ P +RF+TPI+HCN+NAHGRV
Sbjct: 943 RRRRAVAELGQFLASPHPSIEVFPSE-DLFFWKLLLEGPEGTPYQGGVWVLYCHLPPEYPACPPQVRFVTPIRHCNVNAHGRV 1024
BLAST of mRNA_M-pyrifera_M_contig6772.16342.1 vs. uniprot
Match: A0A812TJ48_9DINO (Hypothetical protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812TJ48_9DINO) HSP 1 Score: 103 bits (256), Expect = 2.850e-24 Identity = 44/84 (52.38%), Postives = 59/84 (70.24%), Query Frame = 1
Query: 1 DRARRVQREMMSMIRNPHEAFEVLPSDKDLCFWKAILTGPESTPYKGGCWMLSLYFPPSYPSVAPDIRFITPIQHCNINAHGRV 252
+R+RR+ EM + R PH AF++ P+ D+ WK ++GPE TPY GG W+L + FP +P P+IRFITPI+HCNIN HGRV
Sbjct: 207 ERSRRILAEMRHLHREPHPAFDIFPNCDDIGCWKVTVSGPEGTPYTGGVWLLYIIFPAEFPVEPPEIRFITPIKHCNINQHGRV 290
BLAST of mRNA_M-pyrifera_M_contig6772.16342.1 vs. uniprot
Match: A0A1Q9E8K8_SYMMI (Anaphase-promoting complex subunit 11 n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9E8K8_SYMMI) HSP 1 Score: 102 bits (255), Expect = 1.200e-23 Identity = 42/81 (51.85%), Postives = 57/81 (70.37%), Query Frame = 1
Query: 10 RRVQREMMSMIRNPHEAFEVLPSDKDLCFWKAILTGPESTPYKGGCWMLSLYFPPSYPSVAPDIRFITPIQHCNINAHGRV 252
RR+ EM + R PH AF++ P D+ FWK ++GP+ TPY GG W++ + FPP +P P++RFITPI+HCNIN HGRV
Sbjct: 3241 RRILAEMRYLHREPHPAFDIFPGCDDVGFWKVTVSGPDGTPYAGGVWLIYVVFPPEFPVEPPEVRFITPIKHCNINQHGRV 3321
BLAST of mRNA_M-pyrifera_M_contig6772.16342.1 vs. uniprot
Match: A0A3G4ZPG5_9VIRU (E2 ubiquitin-conjugating enzyme n=1 Tax=Terrestrivirus sp. TaxID=2487775 RepID=A0A3G4ZPG5_9VIRU) HSP 1 Score: 102 bits (254), Expect = 1.620e-23 Identity = 41/84 (48.81%), Postives = 63/84 (75.00%), Query Frame = 1
Query: 1 DRARRVQREMMSMIRNPHEAFEVLPSDKDLCFWKAILTGPESTPYKGGCWMLSLYFPPSYPSVAPDIRFITPIQHCNINAHGRV 252
D + +Q+E++++ +NPH +V +DKD+ FWK ++ GP TPY+ GC++ + FP +YP VAP+IRF+TPI+HCNIN +GRV
Sbjct: 1180 DSCKVIQKELIALQKNPHPDIDVYINDKDMYFWKIVIKGPNGTPYQNGCYLAYIQFPQTYPLVAPNIRFVTPIKHCNINNYGRV 1263
BLAST of mRNA_M-pyrifera_M_contig6772.16342.1 vs. uniprot
Match: A0A6B2LAL7_9EUKA (UBC core domain-containing protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LAL7_9EUKA) HSP 1 Score: 99.8 bits (247), Expect = 1.780e-23 Identity = 39/83 (46.99%), Postives = 59/83 (71.08%), Query Frame = 1
Query: 4 RARRVQREMMSMIRNPHEAFEVLPSDKDLCFWKAILTGPESTPYKGGCWMLSLYFPPSYPSVAPDIRFITPIQHCNINAHGRV 252
R R + +M +I+ PH + E+ P D D+ FW+AIL GP TPY G W++ + FP +YP+ AP++RF+TPI+HCN+N +G+V
Sbjct: 108 REREILFQMKKLIQEPHPSIEIYPCDADIGFWRAILQGPSDTPYHNGVWLVYVLFPSTYPAEAPEVRFVTPIRHCNVNQYGKV 190
BLAST of mRNA_M-pyrifera_M_contig6772.16342.1 vs. uniprot
Match: A0A812WFX1_9DINO (Anaphase-promoting complex subunit 11 n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812WFX1_9DINO) HSP 1 Score: 101 bits (252), Expect = 3.020e-23 Identity = 44/83 (53.01%), Postives = 57/83 (68.67%), Query Frame = 1
Query: 4 RARRVQREMMSMIRNPHEAFEVLPSDKDLCFWKAILTGPESTPYKGGCWMLSLYFPPSYPSVAPDIRFITPIQHCNINAHGRV 252
R R+ EM + R PH AF+V PS D+ FWK ++GP+ TPY GG W+L + FP +P P++RFITPI+HCNIN HGRV
Sbjct: 1512 RRTRILAEMRYLHREPHPAFDVFPSCDDIGFWKVTVSGPDGTPYAGGVWLLYVVFPTEFPVEPPEVRFITPIKHCNINQHGRV 1594
BLAST of mRNA_M-pyrifera_M_contig6772.16342.1 vs. uniprot
Match: A0A812XS93_SYMPI (Hypothetical protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812XS93_SYMPI) HSP 1 Score: 100 bits (249), Expect = 7.710e-23 Identity = 43/83 (51.81%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 4 RARRVQREMMSMIRNPHEAFEVLPSDKDLCFWKAILTGPESTPYKGGCWMLSLYFPPSYPSVAPDIRFITPIQHCNINAHGRV 252
R RR+ EM + PH AF++ PS D+ WKA ++GPE TPY G W+L + FP +P P++RFITPI+HCNIN HGRV
Sbjct: 895 RTRRIMAEMRILHTEPHPAFDIFPSCDDISCWKATVSGPEGTPYADGVWLLYIIFPQQFPVEPPEVRFITPIKHCNINQHGRV 977 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6772.16342.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6772.16342.1 >prot_M-pyrifera_M_contig6772.16342.1 ID=prot_M-pyrifera_M_contig6772.16342.1|Name=mRNA_M-pyrifera_M_contig6772.16342.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp MMSMIRNPHEAFEVLPSDKDLCFWKAILTGPESTPYKGGCWMLSLYFPPSback to top mRNA from alignment at M-pyrifera_M_contig6772:679..1661- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6772.16342.1 ID=mRNA_M-pyrifera_M_contig6772.16342.1|Name=mRNA_M-pyrifera_M_contig6772.16342.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=983bp|location=Sequence derived from alignment at M-pyrifera_M_contig6772:679..1661- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6772:679..1661- >mRNA_M-pyrifera_M_contig6772.16342.1 ID=mRNA_M-pyrifera_M_contig6772.16342.1|Name=mRNA_M-pyrifera_M_contig6772.16342.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig6772:679..1661- (Macrocystis pyrifera P11B4 male)back to top |