mRNA_M-pyrifera_M_contig67655.16332.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig67655.16332.1 vs. uniprot
Match: A0A5A8CUY0_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CUY0_CAFRO) HSP 1 Score: 72.4 bits (176), Expect = 9.720e-12 Identity = 50/137 (36.50%), Postives = 56/137 (40.88%), Query Frame = 1
Query: 4 ELPPGWRAETDDDGDVYYINDETGETQWDRPVVAPTPSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVAADGGAAVADVGAEPATEDSP---LPPGWRAETDDDGDVYYVNDETGETQWDRPVAAEAAEDE 405
ELPPGW DDDGD YY N+ T ETQW+ P AP AV + GAE E + LP GW DDDGD YY N T +TQW+RP A AE E
Sbjct: 515 ELPPGWIKMYDDDGDAYYYNETTEETQWE-PPEAP---------------------------------------------AVEEAGAEATAEAAAGDALPEGWEVRYDDDGDAYYYNQVTEDTQWERPDAPAVAEAE 605
BLAST of mRNA_M-pyrifera_M_contig67655.16332.1 vs. uniprot
Match: B8C7D0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C7D0_THAPS) HSP 1 Score: 68.9 bits (167), Expect = 1.590e-10 Identity = 47/136 (34.56%), Postives = 59/136 (43.38%), Query Frame = 1
Query: 4 ELPPGWRA-ETDDDGDVYYINDETGETQWDRPVVAPTPSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVAADGGAAVADVG---------AEPATEDSPLPPGWRAETDDDGDVYYVNDETGETQWDRPV 381
+LPP W A E D GDVYY N+ TGET WDRP V + DG + V+D +E + LPPGW A +D+GD+YY N+ TGET WDRP+
Sbjct: 158 DLPPDWIALEDPDSGDVYYANEVTGETTWDRPKVPKQLNQQQQIQ--------------------------------DGNSQVSDNNNSSSNFSQYSETENNEEELPPGWVA-LEDEGDIYYANEVTGETTWDRPI 260
BLAST of mRNA_M-pyrifera_M_contig67655.16332.1 vs. uniprot
Match: A0A7S4MHN5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MHN5_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 3.250e-10 Identity = 45/131 (34.35%), Postives = 53/131 (40.46%), Query Frame = 1
Query: 7 LPPGWRAETDDD-GDVYYINDETGETQWDRPVVAPTPSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVAADGGAAVADVGAEPATEDSPLPPGWRAETDDD-GDVYYVNDETGETQWDRPVAAEA 393
LP GW D+ G VYY N+ TGET WD+PV P + A V D G P LP GW TD+D G VYY ++E GET WDRPV E+
Sbjct: 1087 LPEGWVEVADESSGQVYYYNEGTGETSWDKPVAQPETAASEDVVEGEEKEEEGFESPAAEDAPSSESTGEEAAV---------DQGEVPTPGGEALPDGWVEVTDEDSGQVYYYHEERGETSWDRPVQEES 1208
BLAST of mRNA_M-pyrifera_M_contig67655.16332.1 vs. uniprot
Match: A0A7R9ZIF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZIF2_9STRA) HSP 1 Score: 57.0 bits (136), Expect = 5.710e-7 Identity = 46/150 (30.67%), Postives = 58/150 (38.67%), Query Frame = 1
Query: 7 LPPGWRAETDD-DGDVYYINDETGETQWDRPVVAPTPSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVAADGGAAVADVGA--EPATE-------------DSPLPPGWRAETDD-DGDVYYVNDETGETQWDRPVAAEAAEDE 405
LP GW DD G VYY N+ET ET W+RP + D + AD G + D A EP E LP GW D+ G+VYY N+ T ET WD+PV A+++E
Sbjct: 51 LPAGWVEVLDDTSGQVYYFNEETEETSWERPAMESVKDSDEGDTDVAPSPE---------------------VAPADSGKSSPDFPASEEPVEEKENEVSDGDVIDNQGDLPEGWTEVVDERSGEVYYYNEITNETSWDKPVLPNASKEE 179
BLAST of mRNA_M-pyrifera_M_contig67655.16332.1 vs. uniprot
Match: A0A7S0HDV7_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HDV7_9EUKA) HSP 1 Score: 56.6 bits (135), Expect = 9.780e-7 Identity = 41/126 (32.54%), Postives = 52/126 (41.27%), Query Frame = 1
Query: 7 LPPGWRAETDD-DGDVYYINDETGETQWDRPVVAPTPSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVAADGGAAVADVGAEPATEDSPLPPGWRAETDDDGDV-YYVNDETGETQWDRP 378
LP GW A D+ G YY+ND+TGE+QW+ P+ P+ + GA G E A E LP GWR D+ YYVN+ TGETQW+ P
Sbjct: 19 LPAGWSAGFDETSGSTYYVNDQTGESQWELPLQQGDPASQQ-----------------------------------EQGAYAQQGGYESAQE---LPSGWRTVFDEGSQATYYVNELTGETQWEAP 106
BLAST of mRNA_M-pyrifera_M_contig67655.16332.1 vs. uniprot
Match: A0A7S2PP12_9STRA (Hypothetical protein (Fragment) n=3 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PP12_9STRA) HSP 1 Score: 56.6 bits (135), Expect = 2.700e-6 Identity = 39/126 (30.95%), Postives = 52/126 (41.27%), Query Frame = 1
Query: 7 LPPGWRA-ETDDDGDVYYINDETGETQWDRPVVAPTPSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVAADGGAAVADVGAEPATEDSPLPPGWRA-ETDDDGDVYYVNDETGETQWDRP 378
LPPGW A E D D+YY+N+ TG+T WDRP + G+ S++ ++ LPP W A E D G++YY N+ TG T WDRP
Sbjct: 152 LPPGWIALECPDTLDIYYVNEATGDTTWDRPGL----DGEMNESILNDSVQSNDRSDQSESVVESDDDYSSSV-------------------ENTLPPNWIALEDPDSGEMYYANEITGVTTWDRP 254
BLAST of mRNA_M-pyrifera_M_contig67655.16332.1 vs. uniprot
Match: A0A0M0JUA6_9EUKA (E3 ubiquitin-protein ligase nedd4-like protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JUA6_9EUKA) HSP 1 Score: 55.1 bits (131), Expect = 8.680e-6 Identity = 37/128 (28.91%), Postives = 47/128 (36.72%), Query Frame = 1
Query: 7 LPPGWRAETDDDGDVYYINDETGETQWDRPVVAPTPSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVAADGGAAVADVGAEPATEDSPLPPGWRAETDDDGDVYYVNDETGETQWDRPVAAE 390
LP GW+ T DG YY + +GET W+RPVVA + A +G LP GWR + +G YY N +TGET W+RP E
Sbjct: 7 LPSGWKEATAADGRTYYFHAASGETSWERPVVAGSEDSGKSTAALAVKVKPVIPSVPT----------------------TAGIGK--------LPNGWRMVSSPEGTPYYFNKKTGETSWERPAGYE 104
BLAST of mRNA_M-pyrifera_M_contig67655.16332.1 vs. uniprot
Match: A0A7S2MMZ7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MMZ7_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 6.230e-5 Identity = 24/36 (66.67%), Postives = 27/36 (75.00%), Query Frame = 1
Query: 1 DELPPGWRAETDDD-GDVYYINDETGETQWDRPVVA 105
D LPPGW A DDD G +YY N +TGE+ WDRPVVA
Sbjct: 370 DPLPPGWAATYDDDHGALYYHNTDTGESTWDRPVVA 405
BLAST of mRNA_M-pyrifera_M_contig67655.16332.1 vs. uniprot
Match: A0A7S2Y384_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y384_9STRA) HSP 1 Score: 52.8 bits (125), Expect = 6.410e-5 Identity = 46/133 (34.59%), Postives = 62/133 (46.62%), Query Frame = 1
Query: 4 ELPPGWRAETD-DDGDVYYINDETGETQWDRPVVAP-----TPSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALVAADGGAAVADVGAEPATEDSPL-PPGW-RAETDDDGDVYYVNDETGETQWDRP 378
E+P GW D ++G YY N+ETGE+ W+RP VAP T SG XXXX +V + A DV + ++E L P GW A + G++YY N TGE+ +DRP
Sbjct: 16 EMPTGWVEAVDSNNGQTYYYNEETGESSWERPSVAPPTSDITASGPTETLVSLSLKAPPEEPEEENQVEPXXXXEPP-VVKMESEKAELDVEPKDSSEQLDLLPSGWAEATVPESGELYYYNSVTGESSYDRP 147 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67655.16332.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig67655.16332.1 >prot_M-pyrifera_M_contig67655.16332.1 ID=prot_M-pyrifera_M_contig67655.16332.1|Name=mRNA_M-pyrifera_M_contig67655.16332.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp DELPPGWRAETDDDGDVYYINDETGETQWDRPVVAPTPSGDLPPGWRAETback to top mRNA from alignment at M-pyrifera_M_contig67655:44..547- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig67655.16332.1 ID=mRNA_M-pyrifera_M_contig67655.16332.1|Name=mRNA_M-pyrifera_M_contig67655.16332.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig67655:44..547- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig67655:44..547- >mRNA_M-pyrifera_M_contig67655.16332.1 ID=mRNA_M-pyrifera_M_contig67655.16332.1|Name=mRNA_M-pyrifera_M_contig67655.16332.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1008bp|location=Sequence derived from alignment at M-pyrifera_M_contig67655:44..547- (Macrocystis pyrifera P11B4 male)back to top |