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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Opisthokonta |
| Seed ortholog score | 60.8 |
| Seed ortholog evalue | 1.2e-06 |
| Seed eggNOG ortholog | 6087.XP_002165837.1 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | MAC/Perforin domain |
| EggNOG OGs | 2E0E4@1,2S7UT@2759,3ADT8@33154 |
| COG Functional cat. | S |
| Best tax level | Opisthokonta |
| Best eggNOG OG | NA|NA|NA |
| Exons | 1 |
| Model size | 924 |
| Cds size | 924 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622816566.4471726-CDS-M-pyrifera_M_contig67615:68..992 | 1622816566.4471726-CDS-M-pyrifera_M_contig67615:68..992 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig67615 69..992 - |
| 1692278050.6031604-CDS-M-pyrifera_M_contig67615:68..992 | 1692278050.6031604-CDS-M-pyrifera_M_contig67615:68..992 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig67615 69..992 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig67615.16316.1 >prot_M-pyrifera_M_contig67615.16316.1 ID=prot_M-pyrifera_M_contig67615.16316.1|Name=mRNA_M-pyrifera_M_contig67615.16316.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=308bp
FPGSVALGAGYNILAGDPIAASSDPGYTPGSVFNPNCASCFSGGRTFGPF
KLPNDVDVVAEQTCSYSGVSFAFHDTTTYQSASEKSVTDDGGFSTLLGLV
GARFSASSFAQKLVNATVGGDVVVTSSTGTCAAYGVSIEPKTYDFTESLT
EDFVNGLATLPSTFNPLNATNVALFEKFIAEFGTHTVVSTTLGGQASQVT
TFDSASFSFLQTLVEDIEATASASLLIFFGGSISASAKVTEEEYLAFATS
FSSNETNCRPFCPPSGNLSVDDPTGAWLPLLQFEHGGTAAPIAIQLMPLE
ALLATLKH back to topmRNA from alignment at M-pyrifera_M_contig67615:69..992- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig67615.16316.1 ID=mRNA_M-pyrifera_M_contig67615.16316.1|Name=mRNA_M-pyrifera_M_contig67615.16316.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=924bp|location=Sequence derived from alignment at M-pyrifera_M_contig67615:69..992- (Macrocystis pyrifera P11B4 male)
TTCCCGGGCAGCGTAGCCCTCGGAGCCGGGTACAACATTCTTGCTGGTGA
TCCAATTGCAGCTTCTAGCGATCCTGGGTATACGCCTGGCAGTGTATTCA
ATCCCAATTGTGCATCATGTTTCTCTGGAGGCCGTACATTTGGCCCCTTC
AAACTCCCTAATGATGTAGACGTCGTTGCTGAACAAACTTGCTCGTATTC
TGGGGTTTCGTTTGCTTTCCATGACACCACAACGTATCAATCTGCAAGTG
AAAAGAGTGTAACAGATGACGGAGGGTTTTCTACATTGCTAGGGCTTGTA
GGCGCTCGGTTTTCTGCCTCAAGCTTTGCACAAAAGCTTGTAAATGCAAC
AGTTGGTGGAGACGTTGTTGTCACTTCGTCTACAGGGACATGTGCTGCGT
ATGGGGTGAGTATTGAACCAAAGACATATGATTTTACCGAGTCACTTACG
GAGGATTTTGTGAACGGTCTGGCAACTCTTCCATCCACCTTCAATCCACT
CAATGCAACCAATGTTGCCTTGTTTGAGAAGTTTATTGCAGAGTTTGGGA
CACATACTGTTGTTTCCACGACTCTAGGGGGCCAAGCGTCTCAAGTAACA
ACGTTTGACTCTGCGTCATTCTCTTTCCTCCAAACCTTGGTAGAAGACAT
CGAGGCTACTGCGAGTGCTTCGCTGCTCATCTTCTTTGGAGGAAGTATCA
GTGCAAGCGCAAAAGTAACAGAAGAAGAGTATCTTGCGTTTGCTACAAGT
TTTTCCAGCAACGAAACAAATTGTCGTCCATTTTGTCCACCAAGTGGCAA
TTTAAGTGTTGATGATCCAACTGGAGCCTGGCTTCCTTTGTTGCAATTTG
AACATGGGGGAACTGCTGCTCCCATTGCAATTCAACTCATGCCATTGGAA
GCATTACTTGCAACTCTCAAACAC back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig67615:69..992- >mRNA_M-pyrifera_M_contig67615.16316.1 ID=mRNA_M-pyrifera_M_contig67615.16316.1|Name=mRNA_M-pyrifera_M_contig67615.16316.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1848bp|location=Sequence derived from alignment at M-pyrifera_M_contig67615:69..992- (Macrocystis pyrifera P11B4 male)
TTCCCGGGCAGCGTAGCCCTCGGAGCCGGGTACAACATTCTTGCTGGTGA
TCCAATTGCAGCTTCTAGCGATCCTGGGTATACGCCTGGCAGTGTATTCA
ATCCCAATTGTGCATCATGTTTCTCTGGAGGCCGTACATTTGGCCCCTTC
AAACTCCCTAATGATGTAGACGTCGTTGCTGAACAAACTTGCTCGTATTC
TGGGGTTTCGTTTGCTTTCCATGACACCACAACGTATCAATCTGCAAGTG
AAAAGAGTGTAACAGATGACGGAGGGTTTTCTACATTGCTAGGGCTTGTA
GGCGCTCGGTTTTCTGCCTCAAGCTTTGCACAAAAGCTTGTAAATGCAAC
AGTTGGTGGAGACGTTGTTGTCACTTCGTCTACAGGGACATGTGCTGCGT
ATGGGGTGAGTATTGAACCAAAGACATATGATTTTACCGAGTCACTTACG
GAGGATTTTGTGAACGGTCTGGCAACTCTTCCATCCACCTTCAATCCACT
CAATGCAACCAATGTTGCCTTGTTTGAGAAGTTTATTGCAGAGTTTGGGA
CACATACTGTTGTTTCCACGACTCTAGGGGGCCAAGCGTCTCAAGTAACA
ACGTTTGACTCTGCGTCATTCTCTTTCCTCCAAACCTTGGTAGAAGACAT
CGAGGCTACTGCGAGTGCTTCGCTGCTCATCTTCTTTGGAGGAAGTATCA
GTGCAAGCGCAAAAGTAACAGAAGAAGAGTATCTTGCGTTTGCTACAAGT
TTTTCCAGCAACGAAACAAATTGTCGTCCATTTTGTCCACCAAGTGGCAA
TTTAAGTGTTGATGATCCAACTGGAGCCTGGCTTCCTTTGTTGCAATTTG
AACATGGGGGAACTGCTGCTCCCATTGCAATTCAACTCATGCCATTGGAA
GCATTACTTGCAACTCTCAAACACTTCCCGGGCAGCGTAGCCCTCGGAGC
CGGGTACAACATTCTTGCTGGTGATCCAATTGCAGCTTCTAGCGATCCTG
GGTATACGCCTGGCAGTGTATTCAATCCCAATTGTGCATCATGTTTCTCT
GGAGGCCGTACATTTGGCCCCTTCAAACTCCCTAATGATGTAGACGTCGT
TGCTGAACAAACTTGCTCGTATTCTGGGGTTTCGTTTGCTTTCCATGACA
CCACAACGTATCAATCTGCAAGTGAAAAGAGTGTAACAGATGACGGAGGG
TTTTCTACATTGCTAGGGCTTGTAGGCGCTCGGTTTTCTGCCTCAAGCTT
TGCACAAAAGCTTGTAAATGCAACAGTTGGTGGAGACGTTGTTGTCACTT
CGTCTACAGGGACATGTGCTGCGTATGGGGTGAGTATTGAACCAAAGACA
TATGATTTTACCGAGTCACTTACGGAGGATTTTGTGAACGGTCTGGCAAC
TCTTCCATCCACCTTCAATCCACTCAATGCAACCAATGTTGCCTTGTTTG
AGAAGTTTATTGCAGAGTTTGGGACACATACTGTTGTTTCCACGACTCTA
GGGGGCCAAGCGTCTCAAGTAACAACGTTTGACTCTGCGTCATTCTCTTT
CCTCCAAACCTTGGTAGAAGACATCGAGGCTACTGCGAGTGCTTCGCTGC
TCATCTTCTTTGGAGGAAGTATCAGTGCAAGCGCAAAAGTAACAGAAGAA
GAGTATCTTGCGTTTGCTACAAGTTTTTCCAGCAACGAAACAAATTGTCG
TCCATTTTGTCCACCAAGTGGCAATTTAAGTGTTGATGATCCAACTGGAG
CCTGGCTTCCTTTGTTGCAATTTGAACATGGGGGAACTGCTGCTCCCATT
GCAATTCAACTCATGCCATTGGAAGCATTACTTGCAACTCTCAAACAC back to top
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