mRNA_M-pyrifera_M_contig6751.16300.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6751.16300.1 vs. uniprot
Match: A0A6H5JFG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG9_9PHAE) HSP 1 Score: 168 bits (426), Expect = 8.540e-38 Identity = 95/159 (59.75%), Postives = 106/159 (66.67%), Query Frame = 1
Query: 2152 PRTLPRKVSLRFVPRDQVTKDRVAERDYLPFQKLKAPLWKPLEAVFKFMKKKWSGVALSDLNSIRIAFDTPESHGRTSSPTDSG---------------RTIVWGAEKSGDALTDLVYSLPDSAIARLCEEEALDLTYTFLPGPVGPFLLAGSAPWDTA 2583
PR LPRKVSLRF PRD+ T+ +V+E YLPFQKL APL KPLEAVFKFM KKWS VA SDLNSIRI FD G T PT + RT+VWGAE S L DLV +LP A+ R+CEE+AL L+YTFL GPVGP GSAPWD A
Sbjct: 695 PRQLPRKVSLRFSPRDESTEGKVSEHGYLPFQKLTAPLSKPLEAVFKFMVKKWSEVAYSDLNSIRIVFDADA--GDTGVPTAAASTPALSQPXXXXXADRTVVWGAELSKRPLLDLVSALPGPALDRVCEEQALSLSYTFLTGPVGPPPSRGSAPWDAA 851
BLAST of mRNA_M-pyrifera_M_contig6751.16300.1 vs. uniprot
Match: D7FI25_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI25_ECTSI) HSP 1 Score: 139 bits (351), Expect = 3.750e-29 Identity = 380/956 (39.75%), Postives = 443/956 (46.34%), Query Frame = 1
Query: 1 MADIGGDGASLMMGGFDPSAFTGRDEDLILPGDSLFGFSAAAAIDGNGDVEVDVG-GACASFQ--AAASL--PPEAGYSKASSSWGLSSKHRGTGGVDGAGAV---------GKDGXXXXXXXXXXXXGDVRRLLKTP------SLLQSLDAAIVSAAARDAA-------------NAXXXXXXXXXXXXVDRNAPKAKAKGTMTKKTTKSGSRKPSICGSSSSSSSRNINGTTSAGDADVGNDXXXXXXXXAARVAPCRPATSLTRPRQGSSDKQGAAAAXXXXXXXXXXXXPATRDCAAVMPAGMELIPGFEDTIDSHFMAALLQGDATSQPRAAKGVEKGASGGG--------------------GEGEDDGCGVGFPLDPAQTPLKGFDASP----AAAASDVAGAALGGPTASPGEELGLSPE--SVGLAKKEREGDGQGGSSVDGPSITSDGLEAAWRSDDEEGEVVGATPSPAQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQPLSVTEPPLPTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLPPPSLRLAPSMTPPVITPACDTDLGAEKESSSRVIERGERKRENXXXXXXXXXXXXXXX---------------------------PAAAPTPHKT-ARERARE-EAAAVGKKKAAPVTASTRAENAAEQG-----VRTMFLAEPKDRAELTGEPCPDVAVNHRTARSRLGGADGKVEGGGGTSR-PEGGASLPEAAMAPSS----FSVPGVEVP-----GGVLDEAAFDAG-ASVNDWELPSAAEPRTLPRKVSLRFVPRDQVTKDRVAERDYLPFQKLKAPLWKPLEAVFKFMKKKWSGVALSDLNSIRIAFDTPESHGRTSSPTDSG------------------RTIVWGAEKSGDALTDLVYSLPDSAIARLCEEE 2502
MADIGGD AS+MMG DPSAFTGRDEDL LPGDSLFGFSAAA ++GN +V G G+ SF +AASL PP A +SS G D A A GKD GD P SL QSLDAAIVSAAARDA XXXXXXXXXXXX +K +T G R + + +++ NGT SA V P RPA +L XXXXXXX P+ + +PAGMELIPGFEDTIDSHFM ALLQ + +QP + + G G D G +GFP L G P AAAA+D G +PE S A R+ G+S DG ++ + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XX P + LA + +D G+ K S+ R ++ +R XXXXXXXXXXXXXXX PA+ KT ARE+A E + G A P +A RA A +G V A P AE + P V + T RS+ A + + P S P AA+ PSS FS V GG + + A A A+V + + PR LPRKVSLRF PRD+ T+ +V+ER YLPFQKL APL KPLEAVFKFM KKWS VA SDLNSIRI FD G T P S RT+VWGAE S L DLV +LP A+ R+CEE+
Sbjct: 1 MADIGGDSASMMMGPIDPSAFTGRDEDLFLPGDSLFGFSAAAGMEGNNAPDVGGGDGSNPSFPGGSAASLLFPPMASSPLQASSGSFQPSASLPPGPDSAAAAAGGAVAVRAGKD------RGNWSGEGDATSAAVQPPARAVLSLKQSLDAAIVSAAARDAKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKSKGSTGVGGR---VVDAGKKATTTAANGTASA-------------------VTPRRPARNLXXXXXXXXXXXXXX------XXXXXXXSPSVSGVS--LPAGMELIPGFEDTIDSHFMTALLQRGSDTQPGVSSASASAFASAESQVLAAXXXXXXXXXGEEVVGFGSDPGLSLGFP----DALLLGCGTQPSELNAAAAADAKG----------------TPENHSESAAPVARKAAADDGASADGAGVS----------------ITRGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXASPCGESPTTRVELATA-----------SDPGSAKRSTIRKTDKPKRTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEASQLAGARAVEPASTMKATKTLAREKAMEPQQEGAG---AVPASALPRASGGAARGRVGATVDEAGAATPTTLAEPALQT-PAVRRDEVTDRSKQPQAATQQQAKPAPQPLPPSPPSRPPAAVVPSSAGSSFSGNTAVVTERMGMGGFVGQPAGPARPAAVAAEAVRGRSSPRQLPRKVSLRFSPRDESTESKVSERGYLPFQKLTAPLSKPLEAVFKFMVKKWSEVAYSDLNSIRIIFDADA--GDTGVPASSAXXXXXXXXXXXXXXXXADRTVVWGAELSKRPLLDLVSALPGPALDRVCEEQ 867 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6751.16300.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6751.16300.1 >prot_M-pyrifera_M_contig6751.16300.1 ID=prot_M-pyrifera_M_contig6751.16300.1|Name=mRNA_M-pyrifera_M_contig6751.16300.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=2271bp MADIGGDGASLMMGGFDPSAFTGRDEDLILPGDSLFGFSAAAAIDGNGDVback to top mRNA from alignment at M-pyrifera_M_contig6751:2854..12934- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6751.16300.1 ID=mRNA_M-pyrifera_M_contig6751.16300.1|Name=mRNA_M-pyrifera_M_contig6751.16300.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=10081bp|location=Sequence derived from alignment at M-pyrifera_M_contig6751:2854..12934- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6751:2854..12934- >mRNA_M-pyrifera_M_contig6751.16300.1 ID=mRNA_M-pyrifera_M_contig6751.16300.1|Name=mRNA_M-pyrifera_M_contig6751.16300.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=13626bp|location=Sequence derived from alignment at M-pyrifera_M_contig6751:2854..12934- (Macrocystis pyrifera P11B4 male)back to top |