mRNA_M-pyrifera_M_contig67458.16292.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig67458.16292.1
Unique NamemRNA_M-pyrifera_M_contig67458.16292.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig67458.16292.1 vs. uniprot
Match: A0A5A8D760_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D760_CAFRO)

HSP 1 Score: 155 bits (392), Expect = 1.290e-40
Identity = 90/189 (47.62%), Postives = 118/189 (62.43%), Query Frame = 1 
Query:    1 YRMLSMPVVATTPFAYPRLYALHSMPADAGTPLT--ADPSKPLPPGIT----DIAGFAGIRLPPTETLSAASLESTGAYLLDDGIESFLWIGQDAPEPLVRSLLGLPSVKDMDTSGLPFRKLDSPLNRRVHAILGALADAAAQLPRLRVVRQGAADALEARFHWRLVEDRQGFTGSLA-YGDYLALLAR 546
            YR L MPVV +TP AYPR++ALHS+      P+   A+ S+    G        AGF+ +RLPP   LSAAS++  G YLL+DG E+F+W+G  AP  L+  L G+ S   +DTS      + + LN +VHA+L ALAD +  LPR+RVV QG+  A+EARF  RLVED+Q   G LA Y +YLA L R
Sbjct:  564 YRALGMPVVCSTPLAYPRMFALHSLKPGEAEPIDTEAEDSRAAAEGDAYEPPPTAGFSELRLPPVVGLSAASMDRAGVYLLEDGAEAFVWVGDSAPAALLTELFGVASFTGLDTSNAAMPVIGTELNGKVHALLEALADTSPMLPRVRVVVQGSGTAVEARFQARLVEDQQATLGGLASYREYLAQLNR 752
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BLAST of mRNA_M-pyrifera_M_contig67458.16292.1 vs. uniprot
Match: A0A482RG93_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RG93_9ARCH)

HSP 1 Score: 139 bits (350), Expect = 1.390e-36
Identity = 77/183 (42.08%), Postives = 109/183 (59.56%), Query Frame = 1 
Query:    1 YRMLSMPVVATTPFAYPRLYALHSMPADAGTPLTADPSKPLPPGITDIAGFAGIRLPPTETLSAASLESTGAYLLDDGIESFLWIGQDAPEPLVRSLLGLPSVKDMDTSGLPFRKLDSPLNRRVHAILGALADAAAQLPRLRVVRQGAADALEARFHWRLVEDRQGFTG-SLAYGDYLALLAR 546
            YRML+MP V +  F YPRLY+LH M A AG P      +P    ++ +A    + LP    L+A  L S G +LLD+G+E +LWIG+  P   + +L G+ S+  +D   L   +L +P + RV+AI+ AL +   Q  +LR VR+GA D  E RFHW +VED+Q F G +L Y +YL L+ R
Sbjct:  177 YRMLTMPAVDSNIFVYPRLYSLHDMDASAGMP------EPGAAPLSALATQPAVVLPTVVNLTAERLTSDGIFLLDNGVEMYLWIGRACPPAALNALFGISSLDGLDLQSLHLPELANPFSERVNAIVRALREPHFQAQKLRFVREGAGDVAEMRFHWHMVEDKQAFVGGNLTYAEYLPLVNR 353
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BLAST of mRNA_M-pyrifera_M_contig67458.16292.1 vs. uniprot
Match: A0A7S1CB04_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CB04_9STRA)

HSP 1 Score: 136 bits (342), Expect = 9.020e-34
Identity = 81/184 (44.02%), Postives = 106/184 (57.61%), Query Frame = 1 
Query:    1 YRMLSMPVVATTPFAYPRLYALHSMPADAGTPLTADPSKPLPPGIT-DIAGFAGIRLPPTETLSAASLESTGAYLLDDGIESFLWIGQDAPEPLVRSLLGLPSVKDMDTSGLPFRKLDSPLNRRVHAILGALADAAAQLPRLRVVRQGAADALEARFHWRLVEDRQGFTGS-LAYGDYLALLAR 546
            Y+   M V     F YPRLY+LH+MP  AG P           G T  +AG A IRLP    LS+  L S    LLDDG+E  LW+G+ AP  L+ +LLG+ S++ +D +     + D+  + RV  I+GAL +      RL +VR+GA D  E RFHWRLVEDRQGF G+ + Y DYLA  +R
Sbjct:  755 YQAAGMSVARGATFVYPRLYSLHNMPDAAGRPHPEGAPMVGEDGSTITVAGEARIRLPGVTNLSSERLSSDAVLLLDDGVEMLLWVGRAAPPGLLEALLGVHSLEGVDMATFVPARQDNEFSARVWDIMGALREGHPVQQRLLIVREGAGDFAERRFHWRLVEDRQGFAGAGVTYADYLAAASR 938
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BLAST of mRNA_M-pyrifera_M_contig67458.16292.1 vs. uniprot
Match: A0A2P4YB51_9STRA (Vesicle coat complex COPII subunit SEC24/subunit SFB2 n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YB51_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.320e-29
Identity = 74/183 (40.44%), Postives = 101/183 (55.19%), Query Frame = 1 
Query:    1 YRMLSMPVVATTPFAYPRLYALHSMPADAGTPLTADPSKPLPPGITDIAGFAGIRLPPTETLSAASLESTGAYLLDDGIESFLWIGQDAPEPLVRSLLGLPSVKDMDTSGLPFRKLDSPLNRRVHAILGALADAAAQLPRLRVVRQGAADALEARFHWRLVEDRQGFTG-SLAYGDYLALLAR 546
            Y + +MPV  +  F YPR++ALH+MP +AG P T D +     G    A    I LPP   LS   L+  G +LLDD +  +LW+G+ AP  L+ SL G+PS++ +D S L         + RV AIL A+   A +LP   VV     D  E RF W+LVEDR  F G S +Y +YL  ++R
Sbjct:  117 YELNNMPVELSRVFIYPRMFALHNMPPEAGLPPTEDQTADDAEG----APSQSIVLPPVINLSIERLQCDGVFLLDDTLSLYLWVGRSAPPELLESLFGVPSMEGVDCSQLQLLAPHDDTSNRVDAILTAIR--AERLPYQNVVIMREGDPAEGRFFWKLVEDRASFPGGSYSYSEYLGQISR 293
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BLAST of mRNA_M-pyrifera_M_contig67458.16292.1 vs. uniprot
Match: A0A225WSN6_9STRA (Protein transporter Sec24 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A225WSN6_9STRA)

HSP 1 Score: 122 bits (307), Expect = 4.560e-29
Identity = 73/183 (39.89%), Postives = 103/183 (56.28%), Query Frame = 1 
Query:    1 YRMLSMPVVATTPFAYPRLYALHSMPADAGTPLTADPSKPLPPGITDIAGFAGIRLPPTETLSAASLESTGAYLLDDGIESFLWIGQDAPEPLVRSLLGLPSVKDMDTSGLPFRKLDSPLNRRVHAILGALADAAAQLPRLRVVRQGAADALEARFHWRLVEDRQGFTG-SLAYGDYLALLAR 546
            Y + +MPV  +  F YPR++ALH+MP +AG P T D +  +  G T  A    I LPP   LS   L+  G +LLDD +  +LW+G+ AP  L+ SL G+PS++ +D S L         + RV +IL A+   A +LP   VV     D  E R+ W+LVEDR  F G S +Y +YL  ++R
Sbjct:  832 YELNNMPVELSRVFIYPRMFALHNMPPEAGLPGTEDQATEVAEGTTSTA----IVLPPVVNLSIERLQCDGVFLLDDTLSLYLWVGRSAPPELLESLFGVPSMEGVDCSQLKLLAPHDDTSNRVDSILTAIR--AERLPHQNVVIMREGDPAEGRYFWKLVEDRASFPGGSYSYSEYLGQISR 1008
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BLAST of mRNA_M-pyrifera_M_contig67458.16292.1 vs. uniprot
Match: A0A3R7JB47_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JB47_9STRA)

HSP 1 Score: 122 bits (306), Expect = 6.160e-29
Identity = 72/183 (39.34%), Postives = 105/183 (57.38%), Query Frame = 1 
Query:    1 YRMLSMPVVATTPFAYPRLYALHSMPADAGTPLTADPSKPLPPGITDIAGFAGIRLPPTETLSAASLESTGAYLLDDGIESFLWIGQDAPEPLVRSLLGLPSVKDMDTSGLPFRKLDSPLNRRVHAILGALADAAAQLPRLRVVRQGAADALEARFHWRLVEDRQGFTG-SLAYGDYLALLAR 546
            Y + +MPV  +  F YPR++ALH+MP +AG P   D  +P   G ++ A    I LPP   LS   L+  G +LLDD +  +LW+G+ AP  L+ S+ G+PS++ +D S L        ++RRV A+L A+   A +LP   VV     D  E R+ W+LVEDR  F G S +Y +YL  ++R
Sbjct:  779 YELNNMPVELSRVFIYPRMFALHNMPPEAGLPAVED--QPSAEG-SEGASVKSIVLPPVINLSIERLQCDGVFLLDDTLSLYLWVGRSAPPELLESIFGIPSMEGVDCSQLKLLAPHDDMSRRVDAVLSAIR--AERLPYQNVVIMREGDPAEGRYFWKLVEDRASFPGGSYSYSEYLGQISR 956
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BLAST of mRNA_M-pyrifera_M_contig67458.16292.1 vs. uniprot
Match: H3GG43_PHYRM (Uncharacterized protein n=20 Tax=Phytophthora TaxID=4783 RepID=H3GG43_PHYRM)

HSP 1 Score: 119 bits (297), Expect = 9.980e-28
Identity = 71/183 (38.80%), Postives = 102/183 (55.74%), Query Frame = 1 
Query:    1 YRMLSMPVVATTPFAYPRLYALHSMPADAGTPLTADPSKPLPPGITDIAGFAGIRLPPTETLSAASLESTGAYLLDDGIESFLWIGQDAPEPLVRSLLGLPSVKDMDTSGLPFRKLDSPLNRRVHAILGALADAAAQLPRLRVVRQGAADALEARFHWRLVEDRQGFTG-SLAYGDYLALLAR 546
            Y + +MPV  +  F YPR++ALH+MP +AG P  AD ++       +      I LPP   LS   L+  G +LLDD +  +LW+G+ AP  L+ SL G+PS++ +D S L         + RV AIL A+   A +LP   VV     D  E R+ W+LVEDR  F+G S +Y +YL  ++R
Sbjct:  808 YELNNMPVELSRVFIYPRMFALHNMPPEAGLPGAADQAEG-----AESESAKSIVLPPVINLSIERLQCDGVFLLDDTLSLYLWVGRSAPPELLESLFGVPSMEGVDCSQLKLLAPHDDTSTRVDAILSAIR--AERLPYQNVVIMREGDPAEGRYFWKLVEDRASFSGGSYSYSEYLGQISR 983
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BLAST of mRNA_M-pyrifera_M_contig67458.16292.1 vs. uniprot
Match: A0A662XXV8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXV8_9STRA)

HSP 1 Score: 115 bits (289), Expect = 3.580e-27
Identity = 70/179 (39.11%), Postives = 101/179 (56.42%), Query Frame = 1 
Query:   13 SMPVVATTPFAYPRLYALHSMPADAGTPLTADPSKPLPPGITDIAGFAGIRLPPTETLSAASLESTGAYLLDDGIESFLWIGQDAPEPLVRSLLGLPSVKDMDTSGLPFRKLDSPLNRRVHAILGALADAAAQLPRLRVVRQGAADALEARFHWRLVEDRQGFTG-SLAYGDYLALLAR 546
            +MPV  +  F YPR++ALH+MP +AG P   D  +P   G ++ A    + LPP   LS   L+  G +LLDD +  +LW+G+ AP   + SL G+PS++ +D   L         +RR+ AIL A+   A +LP   VV     D  E RF W+LVEDR  F+G S +Y +YL  ++R
Sbjct:  270 NMPVELSRVFIYPRMFALHNMPPEAGLPPADD--QPTAEG-SEGASAKSVVLPPVINLSIERLQCDGVFLLDDTLSIYLWVGRSAPPEFLTSLFGVPSMEGVDCKQLKLLAPHDDASRRIDAILSAIR--AERLPYQNVVIMREGDPSEGRFFWKLVEDRASFSGGSYSYSEYLGQISR 443
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BLAST of mRNA_M-pyrifera_M_contig67458.16292.1 vs. uniprot
Match: M4BN79_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BN79_HYAAE)

HSP 1 Score: 114 bits (286), Expect = 9.330e-27
Identity = 70/183 (38.25%), Postives = 98/183 (53.55%), Query Frame = 1 
Query:    1 YRMLSMPVVATTPFAYPRLYALHSMPADAGTPLTADPSKPLPPGITDIAGFAGIRLPPTETLSAASLESTGAYLLDDGIESFLWIGQDAPEPLVRSLLGLPSVKDMDTSGLPFRKLDSPLNRRVHAILGALADAAAQLPRLRVVRQGAADALEARFHWRLVEDRQGFTGS-LAYGDYLALLAR 546
            Y + +MPV  +  F YPR++ALH+MP +AG P     +     G TD        LPP   L+   L+  G +LLDD +  +LW+G+ AP  L+ SL G+PS++ +D S L         + RV AIL A+   A +LPR  VV     D  E RF W+LVEDR  F G   +Y ++L  + R
Sbjct:  265 YELNNMPVELSRVFIYPRMFALHNMPPEAGLPAAEAQTTEDAQG-TDATSIV---LPPVVNLTIERLQCDGVFLLDDALSLYLWVGRSAPPELLESLFGVPSMEGLDCSQLKLLAPHDETSNRVDAILSAIR--AERLPRQNVVIMREGDPAEGRFFWKLVEDRASFPGGQCSYSEFLGQINR 441
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BLAST of mRNA_M-pyrifera_M_contig67458.16292.1 vs. uniprot
Match: A0A3M6V7M4_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V7M4_9STRA)

HSP 1 Score: 113 bits (283), Expect = 7.860e-26
Identity = 70/183 (38.25%), Postives = 100/183 (54.64%), Query Frame = 1 
Query:    1 YRMLSMPVVATTPFAYPRLYALHSMPADAGTPLTADPSKPLPPGITDIAGFAGIRLPPTETLSAASLESTGAYLLDDGIESFLWIGQDAPEPLVRSLLGLPSVKDMDTSGLPFRKLDSPLNRRVHAILGALADAAAQLPRLRVVRQGAADALEARFHWRLVEDRQGFTG-SLAYGDYLALLAR 546
            Y + +MPV  +  F YPR++ALH+MP +AG P   +       GI D AG   I LPP   LS   L+  G +LLDD +  +LW+G+     L+ SL G+ S++ +D S L        ++ RV AIL A+     +LP   VV     D +E R+ W+LVEDR  F G S +Y +YL  ++R
Sbjct: 1265 YELNNMPVELSRVFIYPRMFALHNMPPEAGLPAAVE-------GI-DGAGATSIVLPPVINLSIERLQCDGVFLLDDTLSLYLWVGRSVSLELLGSLFGVSSMEGVDCSQLKLLAPHDDISNRVDAILSAIRSE--RLPHQNVVIMREGDPVEGRYFWKLVEDRASFPGGSYSYSEYLGQISR 1437
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67458.16292.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8D760_CAFRO1.290e-4047.62Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A482RG93_9ARCH1.390e-3642.08Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A7S1CB04_9STRA9.020e-3444.02Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
A0A2P4YB51_9STRA1.320e-2940.44Vesicle coat complex COPII subunit SEC24/subunit S... [more]
A0A225WSN6_9STRA4.560e-2939.89Protein transporter Sec24 n=2 Tax=Phytophthora Tax... [more]
A0A3R7JB47_9STRA6.160e-2939.34Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
H3GG43_PHYRM9.980e-2838.80Uncharacterized protein n=20 Tax=Phytophthora TaxI... [more]
A0A662XXV8_9STRA3.580e-2739.11Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
M4BN79_HYAAE9.330e-2738.25Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A3M6V7M4_9STRA7.860e-2638.25Uncharacterized protein n=2 Tax=Peronospora effusa... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67458contigM-pyrifera_M_contig67458:646..1263 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score123.2
Seed ortholog evalue1.2e-25
Seed eggNOG ortholog42099.EPrPV00000017858
Preferred nameSEC24B
KEGG koko:K14007
KEGG Pathwayko04141,map04141
KEGG ModuleM00404
Hectar predicted targeting categoryother localisation
GOsGO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0002376,GO:0002474,GO:0002478,GO:0002495,GO:0002504,GO:0002791,GO:0002793,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005798,GO:0005829,GO:0006810,GO:0006886,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006914,GO:0006996,GO:0008104,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009889,GO:0009987,GO:0010556,GO:0010869,GO:0012505,GO:0012506,GO:0012507,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016236,GO:0019222,GO:0019882,GO:0019884,GO:0019886,GO:0022607,GO:0030117,GO:0030120,GO:0030127,GO:0030133,GO:0030134,GO:0030135,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031090,GO:0031323,GO:0031410,GO:0031982,GO:0031984,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033218,GO:0034613,GO:0034622,GO:0035459,GO:0042175,GO:0042277,GO:0042592,GO:0042632,GO:0042886,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045714,GO:0046872,GO:0046907,GO:0046914,GO:0048002,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048475,GO:0048518,GO:0048522,GO:0048878,GO:0050708,GO:0050714,GO:0050789,GO:0050794,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051246,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051668,GO:0055088,GO:0055092,GO:0060255,GO:0061024,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070201,GO:0070727,GO:0070971,GO:0071702,GO:0071705,GO:0071840,GO:0080090,GO:0090087,GO:0090110,GO:0090114,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098827,GO:0098852,GO:1903530,GO:1903532,GO:1904951
EggNOG free text desc.Protein transporter Sec24. Source PGD
EggNOG OGs1MGG9@121069,COG5028@1,KOG1985@2759
COG Functional cat.U
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131
Exons2
Model size546
Cds size540
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67458.16292.1prot_M-pyrifera_M_contig67458.16292.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig67458 646..1257 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816564.956898-CDS-M-pyrifera_M_contig67458:645..10531622816564.956898-CDS-M-pyrifera_M_contig67458:645..1053Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67458 646..1053 -
1692278049.6676-CDS-M-pyrifera_M_contig67458:645..10531692278049.6676-CDS-M-pyrifera_M_contig67458:645..1053Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67458 646..1053 -
1622816564.9674547-CDS-M-pyrifera_M_contig67458:1125..12571622816564.9674547-CDS-M-pyrifera_M_contig67458:1125..1257Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67458 1126..1257 -
1692278049.6795814-CDS-M-pyrifera_M_contig67458:1125..12571692278049.6795814-CDS-M-pyrifera_M_contig67458:1125..1257Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67458 1126..1257 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816564.9772542-UTR-M-pyrifera_M_contig67458:1257..12631622816564.9772542-UTR-M-pyrifera_M_contig67458:1257..1263Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig67458 1258..1263 -
1692278049.6890507-UTR-M-pyrifera_M_contig67458:1257..12631692278049.6890507-UTR-M-pyrifera_M_contig67458:1257..1263Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig67458 1258..1263 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig67458.16292.1

>prot_M-pyrifera_M_contig67458.16292.1 ID=prot_M-pyrifera_M_contig67458.16292.1|Name=mRNA_M-pyrifera_M_contig67458.16292.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp
MLSMPVVATTPFAYPRLYALHSMPADAGTPLTADPSKPLPPGITDIAGFA
GIRLPPTETLSAASLESTGAYLLDDGIESFLWIGQDAPEPLVRSLLGLPS
VKDMDTSGLPFRKLDSPLNRRVHAILGALADAAAQLPRLRVVRQGAADAL
EARFHWRLVEDRQGFTGSLAYGDYLALLAR
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mRNA from alignment at M-pyrifera_M_contig67458:646..1263-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig67458.16292.1 ID=mRNA_M-pyrifera_M_contig67458.16292.1|Name=mRNA_M-pyrifera_M_contig67458.16292.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=618bp|location=Sequence derived from alignment at M-pyrifera_M_contig67458:646..1263- (Macrocystis pyrifera P11B4 male)
TATCGTATGCTCTCCATGCCAGTTGTTGCCACCACGCCGTTTGCGTACCC
ACGCCTCTATGCGTTGCACTCCATGCCAGCTGATGCAGGAACGCCACTCA
CGGCGGATCCATCGAAACCGTTGCCACCAGGGATCACAGTGGAACCGGGA
GAAGATCCAGCGGAAGTTGCTCGTGCTGTTGCTGTTGCCAAGGCGATTCG
GGATGGAGAGGACATTGCTGGGTTCGCTGGAATTCGCCTTCCACCTACGG
AAACGCTCTCTGCCGCATCATTGGAATCCACTGGTGCATACTTGTTGGAT
GATGGAATTGAGAGCTTTTTGTGGATTGGGCAAGATGCGCCTGAACCGTT
GGTGCGATCCCTCCTAGGCCTTCCATCGGTCAAAGACATGGACACGTCTG
GCCTTCCTTTCCGAAAACTCGACTCCCCACTCAACCGTCGTGTGCATGCC
ATTCTCGGTGCGCTCGCTGATGCAGCTGCACAACTTCCACGATTGCGTGT
TGTACGACAAGGAGCTGCAGATGCACTTGAAGCAAGGTTCCATTGGAGAT
TGGTTGAAGATCGACAAGGGTTCACAGGATCGCTTGCATACGGTGACTAC
CTTGCACTCCTTGCAAGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig67458:646..1263-

>mRNA_M-pyrifera_M_contig67458.16292.1 ID=mRNA_M-pyrifera_M_contig67458.16292.1|Name=mRNA_M-pyrifera_M_contig67458.16292.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1080bp|location=Sequence derived from alignment at M-pyrifera_M_contig67458:646..1263- (Macrocystis pyrifera P11B4 male)
ATGCTCTCCATGCCAGTTGTTGCCACCACGCCGTTTGCGTACCCACGCCT
CTATGCGTTGCACTCCATGCCAGCTGATGCAGGAACGCCACTCACGGCGG
ATCCATCGAAACCGTTGCCACCAGGGATCACAATGCTCTCCATGCCAGTT
GTTGCCACCACGCCGTTTGCGTACCCACGCCTCTATGCGTTGCACTCCAT
GCCAGCTGATGCAGGAACGCCACTCACGGCGGATCCATCGAAACCGTTGC
CACCAGGGATCACAGACATTGCTGGGTTCGCTGGAATTCGCCTTCCACCT
ACGGAAACGCTCTCTGCCGCATCATTGGAATCCACTGGTGCATACTTGTT
GGATGATGGAATTGAGAGCTTTTTGTGGATTGGGCAAGATGCGCCTGAAC
CGTTGGTGCGATCCCTCCTAGGCCTTCCATCGGTCAAAGACATGGACACG
TCTGGCCTTCCTTTCCGAAAACTCGACTCCCCACTCAACCGTCGTGTGCA
TGCCATTCTCGGTGCGCTCGCTGATGCAGCTGCACAACTTCCACGATTGC
GTGTTGTACGACAAGGAGCTGCAGATGCACTTGAAGCAAGGTTCCATTGG
AGATTGGTTGAAGATCGACAAGGGTTCACAGGATCGCTTGCATACGGTGA
CTACCTTGCACTCCTTGCAAGAGACATTGCTGGGTTCGCTGGAATTCGCC
TTCCACCTACGGAAACGCTCTCTGCCGCATCATTGGAATCCACTGGTGCA
TACTTGTTGGATGATGGAATTGAGAGCTTTTTGTGGATTGGGCAAGATGC
GCCTGAACCGTTGGTGCGATCCCTCCTAGGCCTTCCATCGGTCAAAGACA
TGGACACGTCTGGCCTTCCTTTCCGAAAACTCGACTCCCCACTCAACCGT
CGTGTGCATGCCATTCTCGGTGCGCTCGCTGATGCAGCTGCACAACTTCC
ACGATTGCGTGTTGTACGACAAGGAGCTGCAGATGCACTTGAAGCAAGGT
TCCATTGGAGATTGGTTGAAGATCGACAAGGGTTCACAGGATCGCTTGCA
TACGGTGACTACCTTGCACTCCTTGCAAGA
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