mRNA_M-pyrifera_M_contig67390.16284.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig67390.16284.1
Unique NamemRNA_M-pyrifera_M_contig67390.16284.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig67390.16284.1 vs. uniprot
Match: A0A812WE76_9DINO (CELSR3 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812WE76_9DINO)

HSP 1 Score: 175 bits (443), Expect = 1.160e-46
Identity = 97/221 (43.89%), Postives = 134/221 (60.63%), Query Frame = 1
Query:    1 IQVRNVREPPQVFDATYTVAEYSPVGLSETTNGTIVGYINATDPDVEDSLVYELQGGTGVDVFEVDSDTGAILVKDPTVISFEEVESFDLLITVSDGTFSTVALARIEVLDINDPVELFPANFSIAENPFLNALVGDPLFALDPDIGQTITFSIVGGNSEDAFAINLCSGQLRVDNPSAVDYEEYEVFDLVIRAEDDGFPMTYDEAIVRVTILDVDDPPRF 663
            ++V N+REPP   D+   V + S      T NG  V  + ATD D+ D+L + +  G     F +DS TG I V +  +I +E    F L I++SD  FSTV++  +EVLD+NDP  +FPA     EN   NALVGD + A DPD+ QT+ FSIVGGN  ++F IN CSGQ+ V+ PS ++YE Y V++L +   DDG P T D A V + ++DV+D P F
Sbjct:  295 VEVSNLREPPIAKDS---VVQLSEAVAGTTLNGNEVIKVTATDDDIGDTLTFSIISGNTGYAFAIDSGTGMITVNNSDMIDYETYPFFHLAISISDQIFSTVSMVTVEVLDVNDPCTVFPAEMEAEENLPENALVGDVIQAYDPDVDQTLLFSIVGGNWNESFGINPCSGQIYVNYPS-LNYELYPVYNLTVMVTDDGVPPTSDTAQVIIQLIDVNDKPYF 511          
BLAST of mRNA_M-pyrifera_M_contig67390.16284.1 vs. uniprot
Match: A0A5A8D5S4_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D5S4_CAFRO)

HSP 1 Score: 171 bits (433), Expect = 2.790e-45
Identity = 103/225 (45.78%), Postives = 144/225 (64.00%), Query Frame = 1
Query:    1 IQVRNVREPPQVFDATYTVAEYSPVGLSETTNGTIVGYINATDPDVEDSLVYEL-QGGTGVDVFEVDSDTGAILVKDPTVISFEEVES-FDLLITVSDGTFSTVALARIEVLDINDPVELFPANFSIAENPFLNALVGDPLFALDPDIGQTITFSIVGG-NSEDAFAINLCSGQLRVDNPSAVDYEEYEVFDLVIR--AEDDGFPMTYDEAIVRVTILDVDDPPR 660
            + V +V+EPP V D    VAE   VG S T NG  VG ++A+D D++  L ++L  G  G  +F + S TG + V + +++ FE   +  D+L+ VSDGTF  V+   +EV ++NDPV++F AN S+ EN  LNALVG+P+ A DPD+ QTI FS++   N   A +IN CSGQLRV NP+A +YE Y    +V+R  A DDGFP T D A V + ++DV+D PR
Sbjct: 2396 VDVVDVQEPPTVSDTFMFVAES--VGGS-TPNGHSVGVVSASDDDMDSQLSFQLLSGNPGGSLFALSSSTGELTVANQSLLDFEAFPTGIDMLVRVSDGTFEGVSRVHVEVTNVNDPVDVFEANMSVPENLALNALVGNPIEATDPDVDQTILFSVMPEFNPMGAVSINKCSGQLRVANPAAFNYELYSDHRIVVRILAVDDGFPQTNDTAEVILNLIDVNDRPR 2617          
BLAST of mRNA_M-pyrifera_M_contig67390.16284.1 vs. uniprot
Match: A0A5A8CE58_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CE58_CAFRO)

HSP 1 Score: 170 bits (430), Expect = 7.030e-45
Identity = 103/225 (45.78%), Postives = 143/225 (63.56%), Query Frame = 1
Query:    1 IQVRNVREPPQVFDATYTVAEYSPVGLSETTNGTIVGYINATDPDVEDSLVYEL-QGGTGVDVFEVDSDTGAILVKDPTVISFEEVES-FDLLITVSDGTFSTVALARIEVLDINDPVELFPANFSIAENPFLNALVGDPLFALDPDIGQTITFSIVGG-NSEDAFAINLCSGQLRVDNPSAVDYEEYEVFDLVIR--AEDDGFPMTYDEAIVRVTILDVDDPPR 660
            + V +V+EPP V D    VAE   VG S T NG  VG ++A+D D +  L ++L  G  G  +F + S TG + V + +++ FE   +  D+L+ VSDGTF  V+   +EV ++NDPV++F AN S+ EN  LNALVG+P+ A DPD+ QTI FS++   N   A +IN CSGQLRV NP+A +YE Y    +V+R  A DDGFP T D A V + ++DV+D PR
Sbjct: 2396 VDVVDVQEPPTVSDTFMFVAES--VGGS-TPNGHSVGVVSASDDDRDSQLSFQLLSGNPGGSLFALSSSTGELTVANQSLLDFEAFPTGIDMLVRVSDGTFEGVSRVHVEVTNVNDPVDVFEANMSVPENLALNALVGNPIEATDPDVDQTILFSVIPEFNPMGAVSINKCSGQLRVANPAAFNYELYPDHRIVVRILAVDDGFPQTNDTAEVILNLIDVNDRPR 2617          
BLAST of mRNA_M-pyrifera_M_contig67390.16284.1 vs. uniprot
Match: A0A7Y7PAE0_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7Y7PAE0_9BACT)

HSP 1 Score: 143 bits (361), Expect = 1.130e-35
Identity = 80/224 (35.71%), Postives = 130/224 (58.04%), Query Frame = 1
Query:    1 IQVRNVREPPQVFDATYTVAEYSPVGLSETTNGTIVGYINATDPDVEDSLVYELQGGTGVDVFEVDSDTGAILVKDPTVISFEEVESFDLLITVSD---GTFSTVALARIEVLDINDPVELFPANFSIAENPFLNALVGDPLFALDPDIGQTITFSIVGGNSEDAFAINLCSGQLRVDNPSAVDYEEYEVFDLVIRAEDDGFPMTYDEAIVRVTILDVDDPPRF 663
            + + +V E P + +  ++V E S  G       T+VG + A+DPD    L Y +  G   D F +DS+TG+I + +   I FE + SF+L++ V D   G  S  A   I+V+++N+P  +F   + + EN      VG+ + A+DPD GQTIT+SIV GN  +AF IN  +G +RV N + +DYE +  F+++++A+DDG       A V +++L+V++ P F
Sbjct:  625 VNLLDVNEYPMISEQLFSVEENSAAG-------TLVGTVQASDPDQGQHLTYSILAGNTFDAFSIDSNTGSITIVNSQAIDFELIPSFELVVQVKDDGQGQLSNFASITIQVINLNEPPAIFDKVYYVEENSPTGTYVGN-IMAVDPDQGQTITYSIVSGNLGNAFVINSHTGDIRVANSAMLDYETHPTFNMIVQAQDDGPGTLSARAKVTISLLNVNETPFF 840          
BLAST of mRNA_M-pyrifera_M_contig67390.16284.1 vs. uniprot
Match: A0A7C2JXL4_9PLAN (Cadherin repeat domain-containing protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2JXL4_9PLAN)

HSP 1 Score: 141 bits (356), Expect = 5.030e-35
Identity = 88/222 (39.64%), Postives = 131/222 (59.01%), Query Frame = 1
Query:    1 IQVRNVREPPQVFDATYTVAEYSPVGLSETTNGTIVGYINATDPDVEDSLVYELQGGTGVDVFEVDSDTGAILVKDPTVISFEEVESFDLLITVSDG---TFSTVALARIEVLDINDPVELFPANFSIAENPFLNALVGDPLFALDPDIGQTITFSIVGGNSEDAFAINLCSGQLRVDNPSAVDYEEYEVFDLVIRAEDD-GFPMTYDEAIVRVTILDVDDP 654
            + + ++  PP + D  + + E   +G S    GT+VG    TDPDV D+L Y +  G     F+++  TGAI V +PTVI FE   +F L++  +D    T S  A   + V +IN+P  +  A F+I EN  L   VG  + A+DPD+GQ++TFSIV GN+  AFAIN  SGQ+ V NP+A+D+E    F+L+I A D+ G P+T    +V V + +V++P
Sbjct:   40 VNITDLNLPPVINDTAFAINENPVIGASV---GTVVG----TDPDVGDTLTYSIISGNIGGAFQINPSTGAITVANPTVIDFEATPAFFLVVQATDSGAPTQSDTANVTVNVTNINEPPIVTNATFTIPENSPLATSVGT-VVAVDPDVGQSVTFSIVSGNTGGAFAINPVSGQITVANPAALDFETSPSFNLIIGATDNAGVPLT-GNGVVTVNLTNVNEP 252          
BLAST of mRNA_M-pyrifera_M_contig67390.16284.1 vs. uniprot
Match: A0A2N2WES3_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Bacteroidetes bacterium HGW-Bacteroidetes-9 TaxID=2013699 RepID=A0A2N2WES3_9BACT)

HSP 1 Score: 140 bits (354), Expect = 9.800e-35
Identity = 77/215 (35.81%), Postives = 126/215 (58.60%), Query Frame = 1
Query:   22 EPPQVFDATYTVAEYSPVGLSETTNGTIVGYINATDPDVEDSLVYELQGGTGVDVFEVDSDTGAILVKDPTVISFEEVESFDLLITVSD---GTFSTVALARIEVLDINDPVELFPANFSIAENPFLNALVGDPLFALDPDIGQTITFSIVGGNSEDAFAINLCSGQLRVDNPSAVDYEEYEVFDLVIRAEDDGFPMTYDEAIVRVTILDVDDPP 657
            +PP + +  +++AE +P       NGT+VG + A+DPD   ++ Y + GG   + F ++S TGA++V +   +++E   SF L + V D   G+ +  A+  + V ++N+  ++    FSI EN      VG  + A DPD GQTIT+SI  GN+ +AFAIN  +GQ+ V+N  A+DYE    F L+IRA+D+G P     A  ++ I ++++ P
Sbjct:  135 QPPTISNQIFSIAENTP-------NGTLVGQVIASDPDAGQTISYTITGGNSSNAFSLNSSTGALIVANTAAVNYESTTSFQLSVQVQDNGTGSLTASAIVTVNVTNVNEAPQMNGQTFSINENSANGTQVGT-MTATDPDQGQTITYSIQSGNTNNAFAINASTGQIIVNNAVALDYESQPNFQLIIRAQDNGTPGLNTTATAQINITNLNENP 341          
BLAST of mRNA_M-pyrifera_M_contig67390.16284.1 vs. uniprot
Match: A0A7X9HHU2_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X9HHU2_9BACT)

HSP 1 Score: 140 bits (354), Expect = 9.880e-35
Identity = 78/217 (35.94%), Postives = 127/217 (58.53%), Query Frame = 1
Query:   16 VREPPQVFDATYTVAEYSPVGLSETTNGTIVGYINATDPDVEDSLVYELQGGTGVDVFEVDSDTGAILVKDPTVISFEEVESFDLLITVSDG---TFSTVALARIEVLDINDPVELFPANFSIAENPFLNALVGDPLFALDPDIGQTITFSIVGGNSEDAFAINLCSGQLRVDNPSAVDYEEYEVFDLVIRAEDDGFPMTYDEAIVRVTILDVDDPP 657
            V  PP + D ++++ E SP       +GT++G INA+DPD   +L + +  G     F +  D G +LV + +++ FE    F + + V D    + +  A  ++ +L+IN+P       F++AENP +N+LVG  + A DPD GQT++FSI+ GN+ +AF++N  SGQLRV+NP  +DYE  + F L I+  D+G P     A + + I +V++ P
Sbjct:  851 VNHPPVINDQSFSLPENSP-------SGTLIGKINASDPDASQTLSWSILSGNTSGAFSLQQD-GNLLVNNASMMDFETTPVFTMRVLVRDNGIPSLTDTATIKVTLLNINEPPAASNRTFTLAENPSINSLVGT-ITATDPDAGQTLSFSIISGNTGNAFSLNQSSGQLRVNNPQVIDYESIKQFRLQIKVSDNGSPPLSSTAQIIINITNVNEAP 1058          
BLAST of mRNA_M-pyrifera_M_contig67390.16284.1 vs. uniprot
Match: A0A7Y7PB27_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7Y7PB27_9BACT)

HSP 1 Score: 140 bits (353), Expect = 1.360e-34
Identity = 80/222 (36.04%), Postives = 129/222 (58.11%), Query Frame = 1
Query:    1 IQVRNVREPPQVFDATYTVAEYSPVGLSETTNGTIVGYINATDPDVEDSLVYELQGGTGVDVFEVDSDTGAILVKDPTVISFEEVESFDLLITVSD---GTFSTVALARIEVLDINDPVELFPANFSIAENPFLNALVGDPLFALDPDIGQTITFSIVGGNSEDAFAINLCSGQLRVDNPSAVDYEEYEVFDLVIRAEDDGFPMTYDEAIVRVTILDVDDPP 657
            + + N+ EPP +   T+TV+E S       +NGT VG + ATDPD   +L + +  G     F ++S TGA+ V   + ++FE   +F L++ V D   GT S+ A   + + ++N+P  +    FSI+EN  +  L G+ + A DPD GQ +T+SI+ GN+  AFAIN  +G L V   SA+++E   VF LV++ +D+G      +A + V +L+V++PP
Sbjct:  560 VNLINLNEPPVISPQTFTVSENS-------SNGTSVGTVAATDPDAGQALSFSILSGNTGTAFAINSATGALTVATSSALNFETNPAFSLIVKVQDNGAGTLSSQATVTVNLSNVNEPPVIVNQAFSISENSAIGTLAGN-VIASDPDAGQALTYSILSGNTNSAFAINSATGALTVAATSALNFETNPVFILVVKVQDNGAGSLSSQANITVNLLNVNEPP 773          
BLAST of mRNA_M-pyrifera_M_contig67390.16284.1 vs. uniprot
Match: A0A7X7WPV6_9BACT (T9SS type A sorting domain-containing protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X7WPV6_9BACT)

HSP 1 Score: 133 bits (334), Expect = 4.690e-32
Identity = 79/217 (36.41%), Postives = 124/217 (57.14%), Query Frame = 1
Query:   16 VREPPQVFDATYTVAEYSPVGLSETTNGTIVGYINATDPDVEDSLVYELQGGTGVDVFEVDSDTGAILVKDPTVISFEEVESFDLLITVSDG---TFSTVALARIEVLDINDPVELFPANFSIAENPFLNALVGDPLFALDPDIGQTITFSIVGGNSEDAFAINLCSGQLRVDNPSAVDYEEYEVFDLVIRAEDDGFPMTYDEAIVRVTILDVDDPP 657
            V  PP + + T++VAE SP       +GT++G I A+DPD   +L + +  G     F +  D G++ V + +++ FE    F L + V D    + +  A   + +L++N+        F++AENP  NAL G  + A DPD GQT++FSI+ GN+ +AF++N  SGQLRV+NP A+DYE  + F L ++  D+G P     A V V I +V++ P
Sbjct:  851 VNHPPAINNQTFSVAENSP-------SGTLIGKITASDPDAGQTLSWSILSGNTSGAFTLQQD-GSLRVNNASMMDFETWPLFTLRVLVRDNGSPSLTDTATVTVNLLNMNEAPVAANRTFTLAENPSANALAGT-ITAADPDAGQTLSFSILSGNTGNAFSLNPISGQLRVNNPQAIDYESVQQFRLQVQVSDNGSPPLSATAQVTVNITNVNEAP 1058          
BLAST of mRNA_M-pyrifera_M_contig67390.16284.1 vs. uniprot
Match: A0A6L4YTY8_9BACT (Outer membrane adhesin-like protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A6L4YTY8_9BACT)

HSP 1 Score: 132 bits (331), Expect = 1.200e-31
Identity = 80/222 (36.04%), Postives = 130/222 (58.56%), Query Frame = 1
Query:    1 IQVRNVREPPQVFDATYTVAEYSPVGLSETTNGTIVGYINATDPDVEDSLVYELQGGTGVDVFEVDSDTGAILVKDPTVISFEEVESFDLLITVSD-GT--FSTVALARIEVLDINDPVELFPANFSIAENPFLNALVGDPLFALDPDIGQTITFSIVGGNSEDAFAINLCSGQLRVDNPSAVDYEEYEVFDLVIRAEDDGFPMTYDEAIVRVTILDVDDPP 657
            I V +V E P + +  +T A Y+P       NGTI+G +NATDPD+  SLVY +Q G     F +++ TG I V + + ++      F + + V D GT   S+ A   I +   N    + P +F+I EN    ++VG+ + A DP+ GQT+++SIV GN+ +AF+I+  SG L V+N  A+D+E   +F L++   D+G P+ + +A V + +++V+DPP
Sbjct: 1272 IHVNDVNEQPVINNQGFTAAAYAP-------NGTIIGTVNATDPDMNQSLVYTIQSGNTGTAFALNASTGVITVANSSALNPSTSPVFTITVRVQDNGTPLMSSTAQVTITLNGQNSAPVIAPQSFTINENLPSGSVVGN-VVASDPNAGQTLSYSIVSGNNSNAFSISS-SGALIVNNAQAIDFESNPLFTLLVMVSDNGTPVLWSQAPVSIAVVNVNDPP 1484          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67390.16284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812WE76_9DINO1.160e-4643.89CELSR3 protein (Fragment) n=1 Tax=Symbiodinium sp.... [more]
A0A5A8D5S4_CAFRO2.790e-4545.78Uncharacterized protein n=1 Tax=Cafeteria roenberg... [more]
A0A5A8CE58_CAFRO7.030e-4545.78Uncharacterized protein n=5 Tax=Cafeteria roenberg... [more]
A0A7Y7PAE0_9BACT1.130e-3535.71T9SS type A sorting domain-containing protein n=1 ... [more]
A0A7C2JXL4_9PLAN5.030e-3539.64Cadherin repeat domain-containing protein n=1 Tax=... [more]
A0A2N2WES3_9BACT9.800e-3535.81Uncharacterized protein (Fragment) n=1 Tax=Bactero... [more]
A0A7X9HHU2_9BACT9.880e-3535.94T9SS type A sorting domain-containing protein n=1 ... [more]
A0A7Y7PB27_9BACT1.360e-3436.04T9SS type A sorting domain-containing protein n=1 ... [more]
A0A7X7WPV6_9BACT4.690e-3236.41T9SS type A sorting domain-containing protein n=1 ... [more]
A0A6L4YTY8_9BACT1.200e-3136.04Outer membrane adhesin-like protein n=1 Tax=Bacter... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig67390contigM-pyrifera_M_contig67390:154..825 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score110.2
Seed ortholog evalue1.3e-21
Seed eggNOG ortholog65071.PYU1_T011033
Hectar predicted targeting categoryother localisation
EggNOG free text desc.homophilic cell adhesion via plasma membrane adhesion molecules
EggNOG OGsKOG1219@2759,KOG3594@1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size672
Cds size672
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816564.2185593-CDS-M-pyrifera_M_contig67390:153..8251622816564.2185593-CDS-M-pyrifera_M_contig67390:153..825Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67390 154..825 -
1692278049.1786895-CDS-M-pyrifera_M_contig67390:153..8251692278049.1786895-CDS-M-pyrifera_M_contig67390:153..825Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig67390 154..825 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig67390.16284.1prot_M-pyrifera_M_contig67390.16284.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig67390 154..825 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig67390.16284.1

>prot_M-pyrifera_M_contig67390.16284.1 ID=prot_M-pyrifera_M_contig67390.16284.1|Name=mRNA_M-pyrifera_M_contig67390.16284.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=224bp
IQVRNVREPPQVFDATYTVAEYSPVGLSETTNGTIVGYINATDPDVEDSL
VYELQGGTGVDVFEVDSDTGAILVKDPTVISFEEVESFDLLITVSDGTFS
TVALARIEVLDINDPVELFPANFSIAENPFLNALVGDPLFALDPDIGQTI
TFSIVGGNSEDAFAINLCSGQLRVDNPSAVDYEEYEVFDLVIRAEDDGFP
MTYDEAIVRVTILDVDDPPRFDLD
back to top

mRNA from alignment at M-pyrifera_M_contig67390:154..825-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig67390.16284.1 ID=mRNA_M-pyrifera_M_contig67390.16284.1|Name=mRNA_M-pyrifera_M_contig67390.16284.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig67390:154..825- (Macrocystis pyrifera P11B4 male)
ATTCAGGTGAGAAATGTGCGGGAACCTCCACAAGTGTTTGATGCAACGTA CACAGTTGCAGAGTACTCCCCAGTGGGGTTGTCTGAAACGACGAATGGAA CAATTGTGGGATACATCAATGCTACGGATCCAGATGTGGAGGATTCTTTG GTGTACGAATTGCAAGGAGGAACAGGGGTTGATGTGTTTGAAGTGGATAG TGATACTGGTGCAATCTTGGTGAAGGATCCAACTGTGATTTCCTTTGAAG AGGTTGAGTCCTTTGATTTGCTGATTACGGTGAGTGATGGTACGTTTTCC ACAGTAGCCTTGGCACGTATTGAGGTGTTGGATATCAATGATCCAGTGGA GTTGTTCCCTGCAAACTTTAGCATTGCTGAGAATCCATTCCTCAACGCTC TTGTTGGAGATCCTCTCTTTGCGTTGGATCCAGACATTGGACAAACGATT ACTTTTTCAATTGTTGGAGGAAACTCTGAAGATGCCTTCGCCATCAACCT TTGCTCAGGACAGCTCCGCGTGGACAATCCCAGTGCAGTGGATTATGAAG AGTATGAGGTGTTTGACTTAGTCATTCGTGCGGAAGATGACGGATTCCCA ATGACATATGACGAGGCAATTGTTCGTGTGACAATTCTAGACGTGGATGA TCCTCCTCGGTTTGATTTGGAC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig67390:154..825-

>mRNA_M-pyrifera_M_contig67390.16284.1 ID=mRNA_M-pyrifera_M_contig67390.16284.1|Name=mRNA_M-pyrifera_M_contig67390.16284.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1344bp|location=Sequence derived from alignment at M-pyrifera_M_contig67390:154..825- (Macrocystis pyrifera P11B4 male)
ATTCAGGTGAGAAATGTGCGGGAACCTCCACAAGTGTTTGATGCAACGTA
CACAGTTGCAGAGTACTCCCCAGTGGGGTTGTCTGAAACGACGAATGGAA
CAATTGTGGGATACATCAATGCTACGGATCCAGATGTGGAGGATTCTTTG
GTGTACGAATTGCAAGGAGGAACAGGGGTTGATGTGTTTGAAGTGGATAG
TGATACTGGTGCAATCTTGGTGAAGGATCCAACTGTGATTTCCTTTGAAG
AGGTTGAGTCCTTTGATTTGCTGATTACGGTGAGTGATGGTACGTTTTCC
ACAGTAGCCTTGGCACGTATTGAGGTGTTGGATATCAATGATCCAGTGGA
GTTGTTCCCTGCAAACTTTAGCATTGCTGAGAATCCATTCCTCAACGCTC
TTGTTGGAGATCCTCTCTTTGCGTTGGATCCAGACATTGGACAAACGATT
ACTTTTTCAATTGTTGGAGGAAACTCTGAAGATGCCTTCGCCATCAACCT
TTGCTCAGGACAGCTCCGCGTGGACAATCCCAGTGCAGTGGATTATGAAG
AGTATGAGGTGTTTGACTTAGTCATTCGTGCGGAAGATGACGGATTCCCA
ATGACATATGACGAGGCAATTGTTCGTGTGACAATTCTAGACGTGGATGA
TCCTCCTCGGTTTGATTTGGACATTCAGGTGAGAAATGTGCGGGAACCTC
CACAAGTGTTTGATGCAACGTACACAGTTGCAGAGTACTCCCCAGTGGGG
TTGTCTGAAACGACGAATGGAACAATTGTGGGATACATCAATGCTACGGA
TCCAGATGTGGAGGATTCTTTGGTGTACGAATTGCAAGGAGGAACAGGGG
TTGATGTGTTTGAAGTGGATAGTGATACTGGTGCAATCTTGGTGAAGGAT
CCAACTGTGATTTCCTTTGAAGAGGTTGAGTCCTTTGATTTGCTGATTAC
GGTGAGTGATGGTACGTTTTCCACAGTAGCCTTGGCACGTATTGAGGTGT
TGGATATCAATGATCCAGTGGAGTTGTTCCCTGCAAACTTTAGCATTGCT
GAGAATCCATTCCTCAACGCTCTTGTTGGAGATCCTCTCTTTGCGTTGGA
TCCAGACATTGGACAAACGATTACTTTTTCAATTGTTGGAGGAAACTCTG
AAGATGCCTTCGCCATCAACCTTTGCTCAGGACAGCTCCGCGTGGACAAT
CCCAGTGCAGTGGATTATGAAGAGTATGAGGTGTTTGACTTAGTCATTCG
TGCGGAAGATGACGGATTCCCAATGACATATGACGAGGCAATTGTTCGTG
TGACAATTCTAGACGTGGATGATCCTCCTCGGTTTGATTTGGAC
back to top