mRNA_M-pyrifera_M_contig67387.16283.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A7J7RVS6_PIPKU (Exonuclease 3'-5' domain containing 3 n=8 Tax=Pipistrellus kuhlii TaxID=59472 RepID=A0A7J7RVS6_PIPKU) HSP 1 Score: 87.0 bits (214), Expect = 1.450e-16 Identity = 69/193 (35.75%), Postives = 101/193 (52.33%), Query Frame = 1
Query: 1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEW---HDLIQVAATMVPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALV----ALARRVARLVHPFQAARDEEGGGEGVVSSP 558
SLLQLAV G +++DLLTL+ + + + G L+ L+ + ++ K+G+G+AGD RL + P LA A +++ ++ H+ I+ AA P +A E RGL+ V LG PL K QQ S+W RPL+ QL YAA DA L+ AL + AR+ P AR E G ++P
Sbjct: 414 SLLQLAVRGRVLLLDLLTLSRPEAQAARALCG------LVSRLLSDPSVTKLGYGMAGDLKRLAAACPALAHAPQQLQGGLDLQLVHERIREAAGPAPGEARAPEP--------RGLSLLVQWVLGRPLDKAQQLSNWDRRPLAEGQLLYAAADAYCLLEVYWALCSQPARVHLPGDLARSPEPPGPQEAAAP 592
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A1Q9DP09_SYMMI (Exonuclease mut-7-like n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DP09_SYMMI) HSP 1 Score: 82.0 bits (201), Expect = 8.400e-15 Identity = 62/162 (38.27%), Postives = 85/162 (52.47%), Query Frame = 1
Query: 1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALARRV 486
S LQLAV ++ DLL LA A K ++ S +L L +VK+GFGL D RL S+P L FR + ++ +++ +A S+G GL+A F+G+PL K QTSDW +RPLS QL+YAA DA L+ LARR+
Sbjct: 1186 STLQLAVEDFIVIFDLLALAPAGKSTAQMLSA------VLASLFCHRGIVKLGFGLQNDLQRLAASYPHLEC-FRRILGTLDLQEVLM--------EARRSKGQTT------GLSALCLEFIGSPLSKRLQTSDWGARPLSREQLSYAALDAHCLLTLARRL 1326
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A812JDC3_9DINO (EXD3 protein n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812JDC3_9DINO) HSP 1 Score: 82.0 bits (201), Expect = 8.600e-15 Identity = 62/162 (38.27%), Postives = 85/162 (52.47%), Query Frame = 1
Query: 1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALARRV 486
S LQLA ++ DLL LA A+K ++ S +L L +VK+GFGL D RL S+P L FR + ++ +++ +A S+G GL+A FLG+PL K QTSDW +RPLS QL+YAA DA L+ LARR+
Sbjct: 1674 STLQLAAEDFIVIFDLLALAPAEKSTAQMLS------TVLASLFCHRGIVKLGFGLQNDLQRLAASYPHLEC-FRRILGTLDLQEVLM--------EARRSKGQTT------GLSALCLEFLGSPLSKRLQTSDWGARPLSREQLSYAALDAHCLLTLARRL 1814
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A5A8DB93_CAFRO (3'-5' exonuclease domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DB93_CAFRO) HSP 1 Score: 79.7 bits (195), Expect = 1.590e-14 Identity = 64/170 (37.65%), Postives = 87/170 (51.18%), Query Frame = 1
Query: 1 SLLQLAVPGTAIVIDLLTLATAKKKESEGG--------SGE-GGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVE--KAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALA 477
S LQLA G + V+DLL L ++G SG+ E L +M + ++VKVG+GL+GD A++ SH +L + P+++ D + A A G E A A GL+ AV LG L K +QTSDWQ R LS AQ+ YAA DA+A LA
Sbjct: 48 STLQLATLGRSWVVDLLALHAEAVAGADGALPPPWHVPSGDLSRAVEALSAVMADPSVVKVGWGLSGDLAKVAASHCFLLRPLHVVEPILDLRDALGTLAR-----AAGEAAPAELCAAADASGLSNAVREVLGGRLSKKEQTSDWQRRELSVAQIRYAAIDALATAHLA 212
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A5N4EB12_CAMDR (Exonuclease mut-7-like protein n=1 Tax=Camelus dromedarius TaxID=9838 RepID=A0A5N4EB12_CAMDR) HSP 1 Score: 80.9 bits (198), Expect = 1.880e-14 Identity = 65/170 (38.24%), Postives = 89/170 (52.35%), Query Frame = 1
Query: 1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATM--VPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALV----ALARRVAR 492
SL+Q+AV G ++DL L + GG L+ L+ E +++K+G+G+AGD L S+P LA A +++ + DL+QV M V A G +G+ RGL+ V LG PL K QQ S+W RPL QL YAATDA L+ AL R AR
Sbjct: 198 SLMQVAVEGRVFLLDLPELLSPA-----GGPAPRAFSRLVSQLLSEPSVMKLGYGMAGDLRSLGASYPALAHAEKQLRGSL---DLLQVHKQMRVVDMPAPGVDGARGP----RGLSLLVQQVLGKPLDKTQQLSNWDRRPLGEGQLVYAATDAYCLLEVYWALCREPAR 355
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A5A8DE45_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DE45_CAFRO) HSP 1 Score: 79.7 bits (195), Expect = 3.070e-14 Identity = 64/170 (37.65%), Postives = 87/170 (51.18%), Query Frame = 1
Query: 1 SLLQLAVPGTAIVIDLLTLATAKKKESEGG--------SGE-GGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVE--KAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALA 477
S LQLA G + V+DLL L ++G SG+ E L +M + ++VKVG+GL+GD A++ SH +L + P+++ D + A A G E A A GL+ AV LG L K +QTSDWQ R LS AQ+ YAA DA+A LA
Sbjct: 48 STLQLATLGRSWVVDLLALHAEAVAGADGALPPPWHVPSGDLSRAVEALSAVMADPSVVKVGWGLSGDLAKVAASHCFLLRPLHVVEPILDLRDALGTLAR-----AAGEAAPAELCAAADASGLSNAVREVLGGRLSKKEQTSDWQRRELSVAQIRYAAIDALATAHLA 212
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: UPI000C9DD8FB (exonuclease mut-7 homolog isoform X8 n=2 Tax=Equus TaxID=9789 RepID=UPI000C9DD8FB) HSP 1 Score: 77.8 bits (190), Expect = 2.260e-13 Identity = 63/174 (36.21%), Postives = 89/174 (51.15%), Query Frame = 1
Query: 1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALARRVARLVHPFQAARD 522
SL+Q+AV G ++DLL L+ + S +L+ L+ + ++ K+G+G+AGD L S P LA +++ + DL QV M D SV+ RGL+ V LG PL K QQ S+W RPLS AQL YAATDA L+ + R + R F + D
Sbjct: 436 SLMQVAVEGHVFLLDLLVLSQTSQAFS----------QLVLRLLSDPSITKLGYGMAGDLRSLGASCPALAHVEKQLRGSL---DLQQVHRQMRVVDMPAP--SVDGTKGPRGLSLLVQQVLGKPLDKRQQLSNWDRRPLSEAQLVYAATDAYCLLEVYRVLCRDSTRFHLSED 594
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: UPI001D04A8B2 (exonuclease mut-7 homolog isoform X10 n=1 Tax=Equus asinus TaxID=9793 RepID=UPI001D04A8B2) HSP 1 Score: 77.8 bits (190), Expect = 2.270e-13 Identity = 63/174 (36.21%), Postives = 89/174 (51.15%), Query Frame = 1
Query: 1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALARRVARLVHPFQAARD 522
SL+Q+AV G ++DLL L+ + S +L+ L+ + ++ K+G+G+AGD L S P LA +++ + DL QV M D SV+ RGL+ V LG PL K QQ S+W RPLS AQL YAATDA L+ + R + R F + D
Sbjct: 309 SLMQVAVEGHVFLLDLLVLSQTSQAFS----------QLVLRLLSDPSITKLGYGMAGDLRSLGASCPALAHVEKQLRGSL---DLQQVHRQMRVVDMPAP--SVDGTKGPRGLSLLVQQVLGKPLDKRQQLSNWDRRPLSEAQLVYAATDAYCLLEVYRVLCRDPTRFHLSED 467
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A8C4MJV0_EQUAS (Exonuclease 3'-5' domain containing 3 n=6 Tax=Equus TaxID=9789 RepID=A0A8C4MJV0_EQUAS) HSP 1 Score: 77.8 bits (190), Expect = 2.300e-13 Identity = 63/174 (36.21%), Postives = 89/174 (51.15%), Query Frame = 1
Query: 1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALARRVARLVHPFQAARD 522
SL+Q+AV G ++DLL L+ + S +L+ L+ + ++ K+G+G+AGD L S P LA +++ + DL QV M D SV+ RGL+ V LG PL K QQ S+W RPLS AQL YAATDA L+ + R + R F + D
Sbjct: 395 SLMQVAVEGHVFLLDLLVLSQTSQAFS----------QLVLRLLSDPSITKLGYGMAGDLRSLGASCPALAHVEKQLRGSL---DLQQVHRQMRVVDMPAP--SVDGTKGPRGLSLLVQQVLGKPLDKRQQLSNWDRRPLSEAQLVYAATDAYCLLEVYRVLCRDPTRFHLSED 553
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Match: A0A5F5PZQ0_HORSE (Exonuclease 3'-5' domain containing 3 n=12 Tax=Equus TaxID=9789 RepID=A0A5F5PZQ0_HORSE) HSP 1 Score: 77.8 bits (190), Expect = 2.310e-13 Identity = 63/174 (36.21%), Postives = 89/174 (51.15%), Query Frame = 1
Query: 1 SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVKVGFGLAGDSARLLGSHPWLAAAFREMTPVVEWHDLIQVAATMVPKDAGGSEGSVEKAVLARGLNAAVALFLGAPLRKVQQTSDWQSRPLSPAQLTYAATDAVALVALARRVARLVHPFQAARD 522
SL+Q+AV G ++DLL L+ + S +L+ L+ + ++ K+G+G+AGD L S P LA +++ + DL QV M D SV+ RGL+ V LG PL K QQ S+W RPLS AQL YAATDA L+ + R + R F + D
Sbjct: 406 SLMQVAVEGHVFLLDLLVLSQTSQAFS----------QLVLRLLSDPSITKLGYGMAGDLRSLGASCPALAHVEKQLRGSL---DLQQVHRQMRVVDMPAP--SVDGTKGPRGLSLLVQQVLGKPLDKRQQLSNWDRRPLSEAQLVYAATDAYCLLEVYRVLCRDSTRFHLSED 564 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67387.16283.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig67387.16283.1 >prot_M-pyrifera_M_contig67387.16283.1 ID=prot_M-pyrifera_M_contig67387.16283.1|Name=mRNA_M-pyrifera_M_contig67387.16283.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=186bp SLLQLAVPGTAIVIDLLTLATAKKKESEGGSGEGGGEELLRDLMHEETLVback to top mRNA from alignment at M-pyrifera_M_contig67387:58..753+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig67387.16283.1 ID=mRNA_M-pyrifera_M_contig67387.16283.1|Name=mRNA_M-pyrifera_M_contig67387.16283.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig67387:58..753+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig67387:58..753+ >mRNA_M-pyrifera_M_contig67387.16283.1 ID=mRNA_M-pyrifera_M_contig67387.16283.1|Name=mRNA_M-pyrifera_M_contig67387.16283.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1116bp|location=Sequence derived from alignment at M-pyrifera_M_contig67387:58..753+ (Macrocystis pyrifera P11B4 male)back to top |