mRNA_M-pyrifera_M_contig67260.16260.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig67260.16260.1 vs. uniprot
Match: A0A812K681_9DINO (Rps2 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812K681_9DINO) HSP 1 Score: 298 bits (763), Expect = 3.530e-99 Identity = 141/213 (66.20%), Postives = 175/213 (82.16%), Query Frame = 1
Query: 7 QLGRLVKAGHIKSIEEIYLHSLRIKEEKIIDTLLPELSDELLKIMPVQKQTTAGQRTRFKAFVAVGDKDGHLGLGVKTSSETALAIRGALVAAKLNLIPIRRGYWGNTAGLPHTVPCKLAGCSGSVRVRLIPAPRGTGLVAAPVTKKLLSLAGINDVYTGSRGHSRTLGNSVRATYLALSKSYSYLTPDLWAKTPLLRTPFEEHSEYLKTIAK 645
+LGRLVKAG I S+E ++LHSL +KE +I+D LPEL DE++KIMPVQKQTTAGQRTRFKAF+AVGDK+GH+GLGVKTS+E A AI+GA+ AKL ++P+RRGYWG+ G PHTV KL G GSVRVRLIPAPRGTGLVAAP TKK+L LAG+ D YT SRGH+RT+GN ++A + AL KSY++L+PDLW KT L +P+ EH+++L AK
Sbjct: 65 KLGRLVKAGKIPSLEHVFLHSLALKEAEIVDQFLPELEDEVMKIMPVQKQTTAGQRTRFKAFIAVGDKNGHIGLGVKTSAEVANAIKGAITLAKLTVVPVRRGYWGSKVGKPHTVANKLQGKCGSVRVRLIPAPRGTGLVAAPATKKMLFLAGVKDCYTSSRGHTRTMGNFIKAIFFALKKSYAFLSPDLWEKTEFLTSPYAEHADFLARSAK 277
BLAST of mRNA_M-pyrifera_M_contig67260.16260.1 vs. uniprot
Match: A0A482RI98_9ARCH (30S ribosomal protein S5 n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RI98_9ARCH) HSP 1 Score: 293 bits (751), Expect = 6.770e-98 Identity = 141/208 (67.79%), Postives = 170/208 (81.73%), Query Frame = 1
Query: 7 QLGRLVKAGHIKSIEEIYLHSLRIKEEKIIDTLLPELSDELLKIMPVQKQTTAGQRTRFKAFVAVGDKDGHLGLGVKTSSETALAIRGALVAAKLNLIPIRRGYWGNTAGLPHTVPCKLAGCSGSVRVRLIPAPRGTGLVAAPVTKKLLSLAGINDVYTGSRGHSRTLGNSVRATYLALSKSYSYLTPDLWAKTPLLRTPFEEHSEYL 630
+LGRLVKAG I S+EEI+LHSL +KE IID L +L DE++KIMPVQKQ+ AGQRTRFKAF+AVGD +GH+GLGVK S+E A AIR A+ AKL+++P+RRGYWG + G PHTVP KL G GSVRVRLIPAPRGTGLVAAP TK++L+LAGI DVYT +RGHSRT+GN ++A Y AL KSY YLTP+LW +T LR P+ E+SE L
Sbjct: 36 KLGRLVKAGKINSVEEIFLHSLPVKEAPIIDYFLKDLKDEVMKIMPVQKQSAAGQRTRFKAFIAVGDSNGHVGLGVKCSNEVANAIRSAITLAKLSIMPVRRGYWGGSVGAPHTVPVKLTGHCGSVRVRLIPAPRGTGLVAAPATKRMLTLAGIRDVYTSTRGHSRTMGNFIKAAYFALCKSYGYLTPNLWKETAFLRNPYSEYSELL 243
BLAST of mRNA_M-pyrifera_M_contig67260.16260.1 vs. uniprot
Match: A0A7S5LJZ4_BEMTA (40S ribosomal protein S2 n=1 Tax=Bemisia tabaci TaxID=7038 RepID=A0A7S5LJZ4_BEMTA) HSP 1 Score: 290 bits (742), Expect = 4.180e-96 Identity = 139/214 (64.95%), Postives = 178/214 (83.18%), Query Frame = 1
Query: 7 QLGRLVKAGHIKSIEEIYLHSLRIKEEKIIDTLL-PELSDELLKIMPVQKQTTAGQRTRFKAFVAVGDKDGHLGLGVKTSSETALAIRGALVAAKLNLIPIRRGYWGNTAGLPHTVPCKLAGCSGSVRVRLIPAPRGTGLVAAPVTKKLLSLAGINDVYTGSRGHSRTLGNSVRATYLALSKSYSYLTPDLWAKTPLLRTPFEEHSEYLKTIAK 645
+LGRLV+ G I+S+EEIY SL IKE +I+D + P L DE+LKIMPVQKQT AGQRTRFKAFVA+GD +GH+GLGVK S E A AIRGA+V AKL++IP+RRGYWGN G PHTVPCK+ G GSV+VRLIPAPRGTG+V+APV KKLL++AGIND YT ++G + TLGN +ATY+A+S++Y++LTPDLW +TPL+++P+ +HSE+L + K
Sbjct: 54 KLGRLVRDGKIRSLEEIYFFSLPIKECEIVDFFIGPYLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDHNGHIGLGVKCSKEVATAIRGAIVLAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVQVRLIPAPRGTGIVSAPVPKKLLTMAGINDCYTSAKGSTGTLGNFAKATYVAISETYAFLTPDLWRETPLIKSPYSDHSEHLSRMHK 267
BLAST of mRNA_M-pyrifera_M_contig67260.16260.1 vs. uniprot
Match: A0A067CWA9_SAPPC (40S ribosomal protein S2 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CWA9_SAPPC) HSP 1 Score: 288 bits (738), Expect = 9.930e-96 Identity = 143/215 (66.51%), Postives = 176/215 (81.86%), Query Frame = 1
Query: 7 QLGRLVKAGHIKSIEEIYLHSLRIKEEKIIDTLLPE-LSDELLKIMPVQKQTTAGQRTRFKAFVAVGDKDGHLGLGVKTSSETALAIRGALVAAKLNLIPIRRGYWGNTAGLPHTVPCKLAGCSGSVRVRLIPAPRGTGLVAAPVTKKLLSLAGINDVYTGSRGHSRTLGNSVRATYLALSKSYSYLTPDLWAKTPLLRTPFEEHSEYL-KTIAK 645
+LGRLVK G I+S+E+I+L+SL +KE +I+D L + L DE++KIMPVQKQTTAGQRTRFKAFVAVGD GH+GLGVK + E A AIRGA+V AK++L+P+RRGYWGN +GLPHTV K+ G GSVRVRLIPAPRGTGL AAP KKLL +AGI D YT +RGH+RTLGN V+ATY AL +YSYLTPDLWA+ +TP++EH+++L K IAK
Sbjct: 45 KLGRLVKEGKIESLEQIFLYSLTVKESEIVDYFLKDRLKDEVMKIMPVQKQTTAGQRTRFKAFVAVGDHAGHIGLGVKCAKEVATAIRGAIVQAKMSLVPVRRGYWGNMSGLPHTVCNKVTGKCGSVRVRLIPAPRGTGLCAAPAPKKLLGMAGIEDCYTSARGHTRTLGNFVKATYYALRNTYSYLTPDLWAENKFGKTPYQEHADFLSKVIAK 259
BLAST of mRNA_M-pyrifera_M_contig67260.16260.1 vs. uniprot
Match: A0A7S2WFQ0_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WFQ0_9STRA) HSP 1 Score: 288 bits (738), Expect = 1.100e-95 Identity = 140/213 (65.73%), Postives = 173/213 (81.22%), Query Frame = 1
Query: 7 QLGRLVKAGHIKSIEEIYLHSLRIKEEKIIDTLLPE-LSDELLKIMPVQKQTTAGQRTRFKAFVAVGDKDGHLGLGVKTSSETALAIRGALVAAKLNLIPIRRGYWGNTAGLPHTVPCKLAGCSGSVRVRLIPAPRGTGLVAAPVTKKLLSLAGINDVYTGSRGHSRTLGNSVRATYLALSKSYSYLTPDLWAKTPLLRTPFEEHSEYLKTIA 642
+LGRLVKAG I S+EEIYL SL IKE +I+D + + L DE++KIMPVQKQTTAGQRTRFKAFVAVGD +GH+GLGVK + E A AIRGA++ AK+N++PIRRG+WG G PHTV KL G GSV VRL+PAPRGTGLVAAP TKK+LS+AG++D YT SRGH+RT+GN ++A + ALSKSY +LTPDLW T L PF+EH+++LKT +
Sbjct: 43 KLGRLVKAGKITSLEEIYLFSLPIKEFQIVDEICKDALKDEVMKIMPVQKQTTAGQRTRFKAFVAVGDSNGHIGLGVKCAKEVATAIRGAIINAKMNVVPIRRGFWGKMVGKPHTVANKLTGKCGSVSVRLVPAPRGTGLVAAPATKKILSMAGLDDCYTSSRGHTRTMGNFIKACFFALSKSYGFLTPDLWTPTVFLPNPFQEHTDFLKTAS 255
BLAST of mRNA_M-pyrifera_M_contig67260.16260.1 vs. uniprot
Match: A0A5A8CH86_CAFRO (S5 DRBM domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CH86_CAFRO) HSP 1 Score: 289 bits (740), Expect = 1.300e-95 Identity = 140/218 (64.22%), Postives = 174/218 (79.82%), Query Frame = 1
Query: 7 QLGRLVKAGHIKSIEEIYLHSLRIKEEKIIDTLL----PELSDELLKIMPVQKQTTAGQRTRFKAFVAVGDKDGHLGLGVKTSSETALAIRGALVAAKLNLIPIRRGYWGNTAGLPHTVPCKLAGCSGSVRVRLIPAPRGTGLVAAPVTKKLLSLAGINDVYTGSRGHSRTLGNSVRATYLALSKSYSYLTPDLWAKTPLLRTPFEEHSEYLKTIAKA 648
+LGRLVKA H+ ++EEI+LHSL +KE IID + EL+DE++KIMPVQKQTTAGQRTRFK FVAVGD+ GHLGLGVK S E ++AIR A+ AKL+L+PIRRGYWG+ G PHTVP K+ G GSVRVRLIPAPRGTGLVAAP TKK+L LAGIND YT +RGH+RT+GN ++A + AL +Y YL+P+LWA+T + TP++EH+E+L KA
Sbjct: 62 KLGRLVKANHVNTLEEIFLHSLPVKEAAIIDHIYGKMSAELTDEVMKIMPVQKQTTAGQRTRFKVFVAVGDRAGHLGLGVKCSGEVSIAIRAAIGLAKLSLVPIRRGYWGSKVGSPHTVPSKVTGKCGSVRVRLIPAPRGTGLVAAPATKKMLELAGINDCYTSARGHTRTMGNFIKAIFFALRSTYGYLSPELWAETHFIATPYQEHTEFLANPKKA 279
BLAST of mRNA_M-pyrifera_M_contig67260.16260.1 vs. uniprot
Match: U5H465_USTV1 (40S ribosomal protein S2 n=4 Tax=Microbotryum TaxID=34416 RepID=U5H465_USTV1) HSP 1 Score: 288 bits (736), Expect = 1.870e-95 Identity = 138/213 (64.79%), Postives = 173/213 (81.22%), Query Frame = 1
Query: 7 QLGRLVKAGHIKSIEEIYLHSLRIKEEKIIDTLLPELSDELLKIMPVQKQTTAGQRTRFKAFVAVGDKDGHLGLGVKTSSETALAIRGALVAAKLNLIPIRRGYWGNTAGLPHTVPCKLAGCSGSVRVRLIPAPRGTGLVAAPVTKKLLSLAGINDVYTGSRGHSRTLGNSVRATYLALSKSYSYLTPDLWAKTPLLRTPFEEHSEYLKTIAK 645
+LGRLVK G IKSIEEIYL SL +KE +IID LLP+L DE+++IMPVQKQT AGQRTRFKAFVAVGD DGH+GLGVK + E A AIRGA++ AKL+++P+RRGYWGN G PHTVPCK+ G GSV V L+PAPRGTG+VAAP +K++L LAG+ D YT SRG++ TLGN ++AT+ A+S++Y +LTPDLW K P +TPF+E S +L +K
Sbjct: 43 KLGRLVKDGKIKSIEEIYLFSLPVKEYQIIDILLPKLKDEVMQIMPVQKQTRAGQRTRFKAFVAVGDFDGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRRGYWGNKLGEPHTVPCKVNGKVGSVYVGLVPAPRGTGIVAAPASKRMLQLAGVEDCYTASRGNTSTLGNFIKATFAAISQTYGFLTPDLWEKIPFSQTPFDEFSSHLALSSK 255
BLAST of mRNA_M-pyrifera_M_contig67260.16260.1 vs. uniprot
Match: A0A336MY00_CULSO (40S ribosomal protein S2 n=2 Tax=Culicoides sonorensis TaxID=179676 RepID=A0A336MY00_CULSO) HSP 1 Score: 288 bits (736), Expect = 3.770e-95 Identity = 140/215 (65.12%), Postives = 175/215 (81.40%), Query Frame = 1
Query: 7 QLGRLVKAGHIKSIEEIYLHSLRIKEEKIIDTLLP-ELSDELLKIMPVQKQTTAGQRTRFKAFVAVGDKDGHLGLGVKTSSETALAIRGALVAAKLNLIPIRRGYWGNTAGLPHTVPCKLAGCSGSVRVRLIPAPRGTGLVAAPVTKKLLSLAGINDVYTGSRGHSRTLGNSVRATYLALSKSYSYLTPDLWAKTPLLRTPFEEHSEYLKTIAKA 648
+LGRLV+ G IKS+EEIYL+SL IKE +IID L +L DE+LKIMPVQKQT AGQRTRFKAFVA+GD +GH+GLGVK S E A AIRGA++ AKL+++P+RRGYWGN G PHTVPCK+ G GSV VRLIPAPRGTG+V+APV KKLL +AGI+D YT SRG + TLGN +ATY A++K+Y++LTPDLW PL +TP++EH+++L K+
Sbjct: 58 KLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGRQLRDEVLKIMPVQKQTRAGQRTRFKAFVAIGDSNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPAPRGTGIVSAPVPKKLLQMAGIDDCYTSSRGSTTTLGNFAKATYAAIAKTYAFLTPDLWKDIPLGKTPYQEHADFLSKAHKS 272
BLAST of mRNA_M-pyrifera_M_contig67260.16260.1 vs. uniprot
Match: A0A4Q0A165_9FUNG (Ribosomal protein S5, N-terminal domain-containing protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4Q0A165_9FUNG) HSP 1 Score: 286 bits (731), Expect = 1.310e-94 Identity = 136/212 (64.15%), Postives = 169/212 (79.72%), Query Frame = 1
Query: 7 QLGRLVKAGHIKSIEEIYLHSLRIKEEKIIDTLLPELSDELLKIMPVQKQTTAGQRTRFKAFVAVGDKDGHLGLGVKTSSETALAIRGALVAAKLNLIPIRRGYWGNTAGLPHTVPCKLAGCSGSVRVRLIPAPRGTGLVAAPVTKKLLSLAGINDVYTGSRGHSRTLGNSVRATYLALSKSYSYLTPDLWAKTPLLRTPFEEHSEYLKTIA 642
+LGRLVK G IKS+E+IYL SL +KE +I+D LP+L DE++KIMPVQKQT AGQRTRFKAFV +GD DGH+GLGVK + E A AIRGA++ AKL++IP+RRGYWG G PHTVP K+ G GSV RL+PAPRGTG+VAAPV KKLL LAGI+D YT SRG +RTLGN V+AT++A+ +YS+LTPDLW KT P++EH+++L A
Sbjct: 48 KLGRLVKEGKIKSMEQIYLFSLPVKEYQIVDFFLPQLKDEVMKIMPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGVKCAKEVATAIRGAIILAKLSVIPVRRGYWGTNLGEPHTVPVKVTGKCGSVLTRLVPAPRGTGIVAAPVPKKLLQLAGISDCYTSSRGSTRTLGNFVKATFVAIGNTYSFLTPDLWGKTKFSMDPYQEHTDFLAKAA 259
BLAST of mRNA_M-pyrifera_M_contig67260.16260.1 vs. uniprot
Match: A0A2T7Q135_POMCA (40S ribosomal protein S2 n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7Q135_POMCA) HSP 1 Score: 286 bits (732), Expect = 1.530e-94 Identity = 142/210 (67.62%), Postives = 173/210 (82.38%), Query Frame = 1
Query: 7 QLGRLVKAGHIKSIEEIYLHSLRIKEEKIIDTLLPE--LSDELLKIMPVQKQTTAGQRTRFKAFVAVGDKDGHLGLGVKTSSETALAIRGALVAAKLNLIPIRRGYWGNTAGLPHTVPCKLAGCSGSVRVRLIPAPRGTGLVAAPVTKKLLSLAGINDVYTGSRGHSRTLGNSVRATYLALSKSYSYLTPDLWAKTPLLRTPFEEHSEYL 630
+LGRLVK G IKS+EEIYL SL IKE +IID+ LP L DE+LKIMPVQKQT AGQRTRFKAFVAVGD +GH+GLGVK S E A AIRGA++ AKL++IP+RRGYWGN G PHTVPCK+ G GSV VRLIPAPRGTG+V+APV KKLL++AGI+D YT +RG + TLGN +ATY A+SK+Y+YLTPDLW +T + P++E+++YL
Sbjct: 53 KLGRLVKDGKIKSLEEIYLFSLPIKECEIIDSFLPSGTLKDEVLKIMPVQKQTRAGQRTRFKAFVAVGDYNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVLVRLIPAPRGTGIVSAPVPKKLLTMAGIDDCYTSARGATATLGNFAKATYSAISKTYAYLTPDLWKETVFNKAPYQEYTDYL 262 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67260.16260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig67260.16260.1 >prot_M-pyrifera_M_contig67260.16260.1 ID=prot_M-pyrifera_M_contig67260.16260.1|Name=mRNA_M-pyrifera_M_contig67260.16260.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp MQLGRLVKAGHIKSIEEIYLHSLRIKEEKIIDTLLPELSDELLKIMPVQKback to top mRNA from alignment at M-pyrifera_M_contig67260:565..1215- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig67260.16260.1 ID=mRNA_M-pyrifera_M_contig67260.16260.1|Name=mRNA_M-pyrifera_M_contig67260.16260.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=651bp|location=Sequence derived from alignment at M-pyrifera_M_contig67260:565..1215- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig67260:565..1215- >mRNA_M-pyrifera_M_contig67260.16260.1 ID=mRNA_M-pyrifera_M_contig67260.16260.1|Name=mRNA_M-pyrifera_M_contig67260.16260.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig67260:565..1215- (Macrocystis pyrifera P11B4 male)back to top |