mRNA_M-pyrifera_M_contig672.16255.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig672.16255.1 vs. uniprot
Match: D7FQ82_ECTSI (3-ketoacyl-(Acyl-carrier-protein) reductase, 3-oxoacyl-[acyl-carrier-protein] reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ82_ECTSI) HSP 1 Score: 415 bits (1067), Expect = 7.420e-145 Identity = 217/242 (89.67%), Postives = 228/242 (94.21%), Query Frame = 1
Query: 1 AVGQGASRGLGAAIAKDLAGTGCSVIVNYAASSGAADEVVKSIMESGGKAVAIKADVSKVDEVTTLFKDAAAAFPDEKIEVLVNNAGITRDTLAMRMKPDMWQQVIDINLSGVFYCSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGMVKYIATEDTALYITGQTFTVDGGMAIGA 726
A+ GASRGLGAAIAKDLAG GCSVIVNYAASSGAA+EVVKSI E+GGKA A+KADVSK DEV TLF DAAAAFPDEKIEV+VNNAGITRDTL MRMKPD WQ VID+NLSGVFY SQAACKLMLKQRKGRI+NISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFA RGVTVNAVCPGFIESDMTA+LDQDAIKKMIPLGRLGKP+EIAGMVK+IATED+A YITGQTFTVDGGMAIGA
Sbjct: 51 AIVTGASRGLGAAIAKDLAGAGCSVIVNYAASSGAAEEVVKSIQEAGGKAAAVKADVSKTDEVKTLFADAAAAFPDEKIEVVVNNAGITRDTLTMRMKPDQWQSVIDLNLSGVFYVSQAACKLMLKQRKGRIINISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAARGVTVNAVCPGFIESDMTADLDQDAIKKMIPLGRLGKPDEIAGMVKFIATEDSAAYITGQTFTVDGGMAIGA 292
BLAST of mRNA_M-pyrifera_M_contig672.16255.1 vs. uniprot
Match: A0A835YXE5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE5_9STRA) HSP 1 Score: 328 bits (840), Expect = 5.050e-111 Identity = 170/241 (70.54%), Postives = 196/241 (81.33%), Query Frame = 1
Query: 1 AVGQGASRGLGAAIAKDLAGTGCSVIVNYAASSGAADEVVKSIMESGGKAVAIKADVSKVDEVTTLFKDAAAAFPDEKIEVLVNNAGITRDTLAMRMKPDMWQQVIDINLSGVFYCSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGMVKYIATEDTALYITGQTFTVDGGMAIG 723
AV G+SRG+GAAIA LA GC V++NYAASSGAAD VV I GG+AVAI+AD SK+ +V +FK A AFP + +EVLVNNAGITRDTL +RMKPD WQ VID+NL+GVFYCSQAA K MLK+R GRIVNISS+VG IGNPGQANYAAAK GVI MT +M +EFA RGVTVNAVCPGFIESDMTA+L DAIK MIP+ RLGK E+AG+V Y+AT+ +A YITG TF VDGG+AIG
Sbjct: 4 AVVTGSSRGIGAAIAASLAEKGCKVVINYAASSGAADAVVADIKAKGGEAVAIQADCSKLADVEAMFKGAVEAFPGDNVEVLVNNAGITRDTLVLRMKPDQWQDVIDLNLTGVFYCSQAAAKTMLKKRAGRIVNISSVVGQIGNPGQANYAAAKGGVIAMTRTMGKEFASRGVTVNAVCPGFIESDMTADLQLDAIKAMIPMARLGKASEVAGLVTYLATDPSADYITGHTFNVDGGIAIG 244
BLAST of mRNA_M-pyrifera_M_contig672.16255.1 vs. uniprot
Match: A0A2V3ICR5_9FLOR (3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICR5_9FLOR) HSP 1 Score: 300 bits (767), Expect = 4.470e-99 Identity = 155/238 (65.13%), Postives = 192/238 (80.67%), Query Frame = 1
Query: 13 GASRGLGAAIAKDLAGTGCSVIVNYAASSGAADEVVKSIMESGGKAVAIKADVSKVDEVTTLFKDAAAAFPDEKIEVLVNNAGITRDTLAMRMKPDMWQQVIDINLSGVFYCSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGMVKYIATEDTALYITGQTFTVDGGMAIGA 726
G+SRG+G AIA +L GC+V+VNY +S+ AA+EVV +I SGG A+A+K +VSK D+V LFK A F +I+V+VNNAGITRDTL +RMK D WQ VID+NL+GVF C+QAA KLMLKQR GRIVNI+S+VGLIGNPGQ NY AAKAGVIG+TMS A+E A RG+TVNAV PGFI SDMTA L D IKKMIP+ R G+PEE+AG+V+Y+A + ++ YITG TF+VDGG+AIG+
Sbjct: 68 GSSRGIGKAIALELGKHGCNVVVNYTSSADAAEEVVTTIKSSGGDAIAVKGNVSKSDQVDALFKAAKDHFG--RIDVVVNNAGITRDTLMLRMKQDQWQDVIDLNLTGVFLCTQAAAKLMLKQRSGRIVNITSVVGLIGNPGQVNYGAAKAGVIGLTMSAAKECASRGITVNAVAPGFINSDMTANLPVDDIKKMIPMNRFGEPEEVAGLVRYLALDPSSAYITGHTFSVDGGIAIGS 303
BLAST of mRNA_M-pyrifera_M_contig672.16255.1 vs. uniprot
Match: B4VS33_9CYAN (3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VS33_9CYAN) HSP 1 Score: 296 bits (759), Expect = 1.370e-98 Identity = 152/236 (64.41%), Postives = 190/236 (80.51%), Query Frame = 1
Query: 13 GASRGLGAAIAKDLAGTGCSVIVNYAASSGAADEVVKSIMESGGKAVAIKADVSKVDEVTTLFKDAAAAFPDEKIEVLVNNAGITRDTLAMRMKPDMWQQVIDINLSGVFYCSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGMVKYIATEDTALYITGQTFTVDGGMAI 720
GASRG+G A+A LA G V+VNYA+SSGAADEVV I E+GG A+A++ADVSK+DEV TL K+ F +++VLVNNAGITRDTL MRMKPD WQ VID+NL+GVF+C++AA K+MLKQ+ GRI+NI+S+ G +GNPGQANY+AAKAGVIG T ++A+E A RG+TVNAV PGFIE+DMT ++ + I K IPLGR GKPEEIAGMV+++A + A YITGQ F VDGGM +
Sbjct: 19 GASRGIGRAVAFALAAEGAKVVVNYASSSGAADEVVAKITEAGGDAIALQADVSKLDEVETLVKETKDKFG--RLDVLVNNAGITRDTLLMRMKPDDWQAVIDLNLTGVFFCTRAASKIMLKQKSGRIINIASVAGQMGNPGQANYSAAKAGVIGFTKTVAKELASRGITVNAVAPGFIETDMTKDIKSEDIIKYIPLGRYGKPEEIAGMVRFLAADPAAAYITGQVFNVDGGMVM 252
BLAST of mRNA_M-pyrifera_M_contig672.16255.1 vs. uniprot
Match: F0Y3V7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3V7_AURAN) HSP 1 Score: 296 bits (757), Expect = 2.670e-98 Identity = 156/241 (64.73%), Postives = 191/241 (79.25%), Query Frame = 1
Query: 13 GASRGLGAAIAKDLAGTGCSVIVNYAASSGAADEVVKSIMESGGKAVAIKADVSKVDEVTTLFKDAAAAFPDEKIEVLVNNAGITRDTLAMRMKPDMWQQVIDINLSGVFYCSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKM---IPLGRLGKPEEIAGMVKYIATEDTALYITGQTFTVDGGMAIGA 726
GASRG+G AIA DL GC+V+VNYAAS G A EVV++I SGG AVA+KAD++ VDE+ LFK+ A F +VLVNNAGIT+D LAMRMKP WQ VID+NLSGVFYCSQAA M K+R GRI+N+SS+VGL GNPGQANYAAAK GV G+TMS A+EFAGRGVTVNAVCPGFI ++M EL +D + K+ IPLGRLG+ +E+AG+V+Y+A + +A YITG + T+DGG+AIGA
Sbjct: 12 GASRGIGRAIALDLGAQGCNVVVNYAASEGPALEVVEAIKASGGDAVAVKADMASVDEIKALFKETADHFGG--CDVLVNNAGITKDGLAMRMKPAQWQAVIDVNLSGVFYCSQAAFTQMAKKRAGRIINMSSVVGLFGNPGQANYAAAKGGVCGLTMSNAKEFAGRGVTVNAVCPGFIGTEMANELGEDMLNKVKEAIPLGRLGEADEVAGLVRYLALDKSAAYITGHSMTIDGGIAIGA 250
BLAST of mRNA_M-pyrifera_M_contig672.16255.1 vs. uniprot
Match: Q00GM6_KARBR (Plastid beta-ketoacyl-ACP reductase protein n=1 Tax=Karenia brevis TaxID=156230 RepID=Q00GM6_KARBR) HSP 1 Score: 298 bits (763), Expect = 4.520e-98 Identity = 161/240 (67.08%), Postives = 189/240 (78.75%), Query Frame = 1
Query: 13 GASRGLGAAIAKDLAGTGCSVIVNYAASSGAADEVVKSIMESGGKAVAIKADVSKVDEVTTLFKDAAAAFPDEKIEVLVNNAGITRDTLAMRMKPDMWQQVIDINLSGVFYCSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIK---KMIPLGRLGKPEEIAGMVKYIATEDTALYITGQTFTVDGGMAIG 723
G SRGLG AIA DLA GC +IVNYAAS+ AA+EVV+ I + GG VA++AD+S + V LFK AA AF DE + VLVNNAGITRD L MRMKP W VI+ NL+GVF+ +QAA K+MLK+RKGRI+NI+S+VG IGNPGQANYAAAK GVI MTMSMAREF RG+TVNAV PGFIESDMTAEL Q+ + K IPLGR GKPEE+AG+VKY+A + +ALYITG VDGG+AIG
Sbjct: 91 GGSRGLGKAIALDLAKEGCKIIVNYAASAAAAEEVVEEIKKLGGDGVAVQADMSTKEGVDGLFKAAAEAF-DEPVGVLVNNAGITRDALTMRMKPAQWTDVINTNLNGVFFAAQAASKVMLKKRKGRIINIASVVGKIGNPGQANYAAAKGGVIAMTMSMAREFGSRGITVNAVAPGFIESDMTAELPQEIVDLQLKNIPLGRFGKPEEVAGLVKYLALDPSALYITGHCLNVDGGIAIG 329
BLAST of mRNA_M-pyrifera_M_contig672.16255.1 vs. uniprot
Match: A0A8J2WZY6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZY6_9STRA) HSP 1 Score: 295 bits (756), Expect = 1.110e-97 Identity = 153/241 (63.49%), Postives = 194/241 (80.50%), Query Frame = 1
Query: 13 GASRGLGAAIAKDLAGTGCSVIVNYAASSGAADEVVKSIMESGGKAVAIKADVSKVDEVTTLFKDAAAAFPDEKIEVLVNNAGITRDTLAMRMKPDMWQQVIDINLSGVFYCSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKM---IPLGRLGKPEEIAGMVKYIATEDTALYITGQTFTVDGGMAIGA 726
GASRG+GAAIAKDL GC+V+VNYAAS G A EVV++I SGG A+AIKA+++++D++ +FK A+ F +VLVNNAGIT+D LAMRMKP WQ VID+NLSGVFYCSQ A M K+RKGRI+N+SS+VGL GNPGQANYA+AK GV G+TMS A+EFA RGVTVNAVCPGFI ++M EL +D ++K+ IPLGRLG EE+AG+V+Y+A +++A YITG + T+DGG+AIGA
Sbjct: 44 GASRGIGAAIAKDLGAQGCNVVVNYAASEGPALEVVEAIKASGGDAIAIKANMAELDDIKAMFKQVASEFGG--CDVLVNNAGITKDGLAMRMKPTQWQDVIDVNLSGVFYCSQQAFNQMAKKRKGRIINMSSVVGLFGNPGQANYASAKGGVCGLTMSNAKEFAARGVTVNAVCPGFIGTEMANELGEDMLEKVKSAIPLGRLGAAEEVAGLVRYLALDESAGYITGHSLTIDGGIAIGA 282
BLAST of mRNA_M-pyrifera_M_contig672.16255.1 vs. uniprot
Match: R7QE57_CHOCR (Chloroplast 3-oxoacyl-[acyl-carrier protein] reductase orecursor n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE57_CHOCR) HSP 1 Score: 292 bits (747), Expect = 7.720e-97 Identity = 153/242 (63.22%), Postives = 191/242 (78.93%), Query Frame = 1
Query: 1 AVGQGASRGLGAAIAKDLAGTGCSVIVNYAASSGAADEVVKSIMESGGKAVAIKADVSKVDEVTTLFKDAAAAFPDEKIEVLVNNAGITRDTLAMRMKPDMWQQVIDINLSGVFYCSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGMVKYIATEDTALYITGQTFTVDGGMAIGA 726
AV G+SRG+G AIA+ L GC V++NYA+S+ AA++ V + + GG AVAI+ ++S D+V LFK A AF +++VLVNNAGITRD L +RMKP WQ+VID+NL+GVF C+QAA KLMLKQR GRIVNI+S+VGLIGN GQ NY AAKAGVIG+TMS ARE A RGVTVNAV PGFI SDMTA L + I +MIP+ RLG+PEE+AG+VKY+A + ++ YITG TF+VDGG+AIGA
Sbjct: 9 AVVTGSSRGIGRAIAEALGAAGCKVVINYASSAEAAEDAVAKVKQLGGDAVAIRGNMSDPDQVANLFKGAVDAFG--RVDVLVNNAGITRDGLLLRMKPSQWQEVIDLNLTGVFMCTQAAAKLMLKQRSGRIVNIASVVGLIGNAGQVNYGAAKAGVIGLTMSAARECAPRGVTVNAVAPGFINSDMTATLPTEKIAEMIPMKRLGEPEEVAGLVKYLALDPSSAYITGHTFSVDGGIAIGA 248
BLAST of mRNA_M-pyrifera_M_contig672.16255.1 vs. uniprot
Match: X5CV96_9EUKA (FabG n=2 Tax=Eukaryota TaxID=2759 RepID=X5CV96_9EUKA) HSP 1 Score: 293 bits (749), Expect = 1.910e-96 Identity = 155/240 (64.58%), Postives = 189/240 (78.75%), Query Frame = 1
Query: 13 GASRGLGAAIAKDLAGTGCSVIVNYAASSGAADEVVKSIMESGGKAVAIKADVSKVDEVTTLFKDAAAAFPDEKIEVLVNNAGITRDTLAMRMKPDMWQQVIDINLSGVFYCSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIK---KMIPLGRLGKPEEIAGMVKYIATEDTALYITGQTFTVDGGMAIG 723
G SRGLG AIA L GC V+VNYAAS+ AA++VV+ I GG VA++AD+S ++ ++ LF+ A AFPD +EVLVNNAGITRDTL +RMKP+ W+ VI+ NL+GVFY SQAA K+MLK+RKGRI+NI+S+VG IGNPGQANYAAAK GVI MTM+MA+EFA RGVTVNAV PGFI SDMT EL D I+ K IP+GR GKPEE+AG+VKY+A + +A YITG VDGG+AIG
Sbjct: 56 GGSRGLGRAIALKLGSEGCRVVVNYAASAEAAEKVVEEIKGLGGDGVAVQADMSSIEGISALFEATAKAFPDP-VEVLVNNAGITRDTLVLRMKPNQWEDVINTNLNGVFYASQAAAKVMLKKRKGRIINIASVVGKIGNPGQANYAAAKGGVIAMTMTMAKEFASRGVTVNAVAPGFISSDMTDELPADIIEQVTKSIPVGRFGKPEEVAGLVKYLALDPSADYITGHCINVDGGIAIG 294
BLAST of mRNA_M-pyrifera_M_contig672.16255.1 vs. uniprot
Match: A0A4D9D9L3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9L3_9STRA) HSP 1 Score: 291 bits (744), Expect = 9.920e-96 Identity = 153/242 (63.22%), Postives = 191/242 (78.93%), Query Frame = 1
Query: 1 AVGQGASRGLGAAIAKDLAGTGCSVIVNYAASSGAADEVVKSIMESGGKAVAIKADVSKVDEVTTLFKDAAAAFPDEKIEVLVNNAGITRDTLAMRMKPDMWQQVIDINLSGVFYCSQAACKLMLKQRKGRIVNISSIVGLIGNPGQANYAAAKAGVIGMTMSMAREFAGRGVTVNAVCPGFIESDMTAELDQDAIKKMIPLGRLGKPEEIAGMVKYIATEDTALYITGQTFTVDGGMAIGA 726
A+ GASRG+G A A +LA G V+VNYA+S+ +A VV+ I G +AVAIKAD+SK +EV LFK+ AAAF D + +LVNNAGIT+D L M MKP+ WQ VIDINLSGVFY S+AA +ML+ R+GRI+N++S+VG IGNPGQANYAAAK GV+G+T + A+EFA RGVTVNAVCPGFIESDMT +LD D IKK IPLGRLG+ E+AGMV+++A + A YITG +F VDGG+AIG+
Sbjct: 52 AIVTGASRGIGKACALELAQHGVKVVVNYASSADSALAVVEEIKALGSEAVAIKADMSKPEEVEALFKETAAAFKDP-VNILVNNAGITKDGLVMTMKPEAWQAVIDINLSGVFYASKAAASVMLRARRGRIINMASVVGQIGNPGQANYAAAKGGVLGLTKANAKEFAARGVTVNAVCPGFIESDMTEKLDLDGIKKAIPLGRLGRASEVAGMVRFLAVDPAAAYITGHSFDVDGGIAIGS 292 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig672.16255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig672.16255.1 >prot_M-pyrifera_M_contig672.16255.1 ID=prot_M-pyrifera_M_contig672.16255.1|Name=mRNA_M-pyrifera_M_contig672.16255.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=243bp AVGQGASRGLGAAIAKDLAGTGCSVIVNYAASSGAADEVVKSIMESGGKAback to top mRNA from alignment at M-pyrifera_M_contig672:14897..18728- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig672.16255.1 ID=mRNA_M-pyrifera_M_contig672.16255.1|Name=mRNA_M-pyrifera_M_contig672.16255.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3832bp|location=Sequence derived from alignment at M-pyrifera_M_contig672:14897..18728- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig672:14897..18728- >mRNA_M-pyrifera_M_contig672.16255.1 ID=mRNA_M-pyrifera_M_contig672.16255.1|Name=mRNA_M-pyrifera_M_contig672.16255.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1458bp|location=Sequence derived from alignment at M-pyrifera_M_contig672:14897..18728- (Macrocystis pyrifera P11B4 male)back to top |