mRNA_M-pyrifera_M_contig6716.16249.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI) HSP 1 Score: 894 bits (2310), Expect = 0.000e+0 Identity = 494/616 (80.19%), Postives = 523/616 (84.90%), Query Frame = 1
Query: 1 MNFPKIGAQGYSLGSLYLNSDEFVWTSADKSSSKKVKWADVSHATWAQFGDYCHLRFFMKNDVPPVRLDGFGKAQHPDVEKFLSGRDIRLSKDRINCGGGNYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDMDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGAMLQLGNLDDHDPYKAALDDDQGDDEESEDDADYAPDALGGSDAESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDAPKGAMSAFMQFSQAKRSETKEANPELKITEISKVLGEKWGKMDAEARGPYNKLAQTDKER 1848
MNF KIG QGYSLG+L L ++E WTS DKSSSKKVKW DVSHATWAQ+ YCHLR FMK D PVRLDGF KAQH D+EKFLS RD+ LS + N GGGNYG++EVLDNIVRFSS N+TLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDED D SPAESLQM+V++RANIHDVKGKVLVEFNESQGTFDFPRGRYS+EMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA I VNMSA+DLQ+KYD NLNSEMIGPLHNLIAKIFKVL+NKPVYVTGKFSS GAKAVKCALGANEG+LYPLNKSFIFIHKPTCIIGFDEI+SVEFQRYGGAQGAGVTRNFDLCVAPKSV GET KPYVFSGIDRSEY+SLYSFLSTKKLRIKNIK+SGND AMLQLG+LDDHDPYKAALDDDQG+DEESE XXXXXXXXXXXXXX XXXXXXXXXXXXXXXXX KDAPKGAMSAFMQFSQA R++ K NPELK+TEISKVLGEKWGK+D + PY A DK R
Sbjct: 1 MNFSKIGVQGYSLGNLQLTAEELNWTSDDKSSSKKVKWLDVSHATWAQYAAYCHLRLFMKRDARPVRLDGFSKAQHADIEKFLSERDVSLSNESPNPGGGNYGDIEVLDNIVRFSSGNKTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKESGNDNAMLQLGDLDDHDPYKAALDDDQGEDEESE----XXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAHKTSKKRPGTGSAKKGPTQKXXXXXXXXXXXXXXXXXAKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKAR 612
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE) HSP 1 Score: 606 bits (1562), Expect = 5.120e-211 Identity = 317/378 (83.86%), Postives = 333/378 (88.10%), Query Frame = 1
Query: 355 RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDMDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAK----IFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGAMLQLGNLDDHDPYKAALDDDQGDDEESEDDADYAPDALGGSDA 1476
RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDED D SPAESLQM+V++RANIHDVKGKVLVEFNESQGTFDFPRGRYS+EMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEAAI VNMSA+DLQ+KYD NLNSEMIGPLHNL+AK IFKVL++KPVYVTGKFSS GAKAVKCALGANEG+LYPLNK GAGVTRNFDLCVAPKSV GET KPYVFSGIDRSEY+SLYSFLSTKKLRIKNIK+ GND AMLQLG+LDDHDPYKAALDDD+G+DEESEDDADYAPDA GGSDA
Sbjct: 3 RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEAAITVNMSAEDLQKKYDSNLNSEMIGPLHNLVAKVPKLIFKVLSSKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNK-----------------------------GAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKERGNDNAMLQLGDLDDHDPYKAALDDDEGEDEESEDDADYAPDARGGSDA 351
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA) HSP 1 Score: 434 bits (1115), Expect = 2.090e-141 Identity = 319/651 (49.00%), Postives = 388/651 (59.60%), Query Frame = 1
Query: 7 FPKIGAQGYSLGSLYLNSDEFVWTSADKSSSKKVKWADVSHATWAQFGDYCHLRFFMKNDV-PPVRLDGFGKAQHPDVEKFLSGRDIRLSKDRINCGGGNYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDMDGPS-----------------PAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAG-VTRNFDLCVAPKSVGGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGAMLQLGNLDDHDPYKAALDDDQGDDEESEDDADYAPDALGGSDAESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK------------------DAPKGAMSAFMQFSQAKRSETKEANPELKITEISKVLGEKWGKMDAEARGPYNKLAQTDKER 1848
F IG QG+S+GS+ + + +W S+D+SS +KV W+ ATWA FG Y HLR FMK+ PPVR DGF +A +++ L+ I+LS+D+ D LV +R+ LP++ ED DG AE+ +V+DRANI DVKG VL E + S GTF PRGRY++EMYS F+RMHGS+YDYKIQY DI+KLFLLEKPD+RYVAFV+SLDKP+RQGQQ+YQHLVL+ +K E + +NMS +LQ+KY G L M G L NLIAKIFK L+ + V+VTG + S GAK VKCA+GA+EGHLYPLNKSFIFIHKPT +IGFDE++SVEFQRY G Q V R+FDLCV +S+ GE +K Y FSGIDRSEY SLY + TK LRIKNIK SG+ A +D D + E + P+A G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + +APKGA SAFM FS R + + P LKITE+SKVLGE+W M AE + + A DK R
Sbjct: 9 FKGIGIQGHSVGSVKFSDEGVMWASSDRSSQQKVLWSKAEKATWAVFGKYAHLRMFMKDPADPPVRFDGFQRADFDRLKEALAAHSIKLSRDK---------------------------------------------------------------DCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPRFTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAGAKCVKCAMGASEGHLYPLNKSFIFIHKPTRVIGFDEVESVEFQRYSGTQDPSTVRRSFDLCVTLRSISGEPSKDYTFSGIDRSEYPSLYQWCQTKNLRIKNIKSSGDKVASALAEAMDSADVREEG---------EIKRVKSSEPEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKPEGGKRKAPAXXXXXXXXXXXKDPNAPKGAKSAFMYFSMETRGDVLKDQPGLKITEVSKVLGERWRGMTAEDKKQFEDKAAADKAR 587
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA) HSP 1 Score: 386 bits (991), Expect = 1.880e-123 Identity = 214/471 (45.44%), Postives = 291/471 (61.78%), Query Frame = 1
Query: 16 IGAQGYSLGSLYLNSDEFVWTSA------DKSSSKKVKWADVSHATWAQFGDYCHLRFFMKNDVPPVRLDGFGKAQHPDVEKFLSGR-DIRLSKDRINCGGGNYGELEVLDNIVRFSS----------------ENRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DMDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGA 1347
IG G+S+G+ ++ W SA D +S+ + V A W FG HLR N R DGF + V ++ D+ +K ++ G ++G E+ D + F E + + + +VSQCV+PG + N++ELQ HESD + D LVAIR +P E D D P+ AE ++ A I + G V+VEF+E++GTF PRGRY IE+Y F+RM G++YDYKI+Y+DI++LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LVL+TTK+ + + VN+ +L+++Y G L M G L NLIAK FK++A K V++ GKF + VKCAL ANEGHLYPL KSF+FIHKP +I FDE+DSVEFQRY G QG+ TRNFDLCV S G+ K Y+FSGIDRS+YTSLY+FLS KK++IKNI++S D A
Sbjct: 15 IGLHGHSVGTFMADAQGIKWKSALLTDDDDVVTSRSISKKHVIGARWTIFGRSGHLRIQTPNTE--FRFDGFPYSDFDKVRDIMNEYYDVETNKLPMSTAGNSFGLTEIEDRNLAFKQCILEDADEEGEEFEPREGDEMMSMKLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVAIRFYIPPDPEMDPSDRDAPTSAEVFHQRIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIARLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTKENSEVTVNLDEKELEEEYKGELQPVMQGALCNLIAKTFKIIAKKKVFIPGKFVNAYQQSCVKCALKANEGHLYPLEKSFVFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVMLASSAGDPQKEYIFSGIDRSDYTSLYNFLSGKKIKIKNIQESKIDTA 480
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A7S4HR37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR37_9STRA) HSP 1 Score: 390 bits (1001), Expect = 5.060e-121 Identity = 273/664 (41.11%), Postives = 377/664 (56.78%), Query Frame = 1
Query: 16 IGAQGYSLGSLYLNSDEFVWTSA--------DKSSSKKVKWADVSHATWAQFGDYCHLRFFMKNDVP---PVRLDGFGKAQHP---DVEKFLSGRDIRLSKDRINCGGGNYGELEVLDNIVRFSS----------------ENRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLP-EKDED---MDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGETTKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGND---------------GAMLQLGNLDD--HDPYKAALDDDQGDDEESEDDADYAPDALGGSDAESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKD--APKGAMSAFMQFSQAKRSETKEANPELKITEISKVLGEKWGKMDAEARGPYNKLAQTDKER 1848
IG G+S+G+ + D W SA D SSS+ + + A W FG H+R K P +R DGF A DV K L D+ L+K ++ G ++G ++ D + F + + N+K++SQCV+PG + N++E+Q HESDA + D LVAIR +P + D D +D +PAE Q ++ ANI G V+VE E++GTF PRGRY+IE+Y F+RM G++YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD A + VN+ + L+++Y+G+L M G L NL+AK FK++A K V++ GKF++ VKCAL A+EGHLYPL K FIFIHKPT ++ FD+++SVEFQRY G QG+ TRNFDLCV+ + G +TK Y+FSGIDRS+YT LY+FLS KK++IKN++ + D G G +++ D D++ + E D D SD E XXXXXXX XXXXXXXXXXXXXX XX D APK SA+ F A R + KE NP+ E+S + G+ W K+ E + Y K+A++D R
Sbjct: 10 IGLHGHSVGTFTADPDGLRWKSAVMGGGDNDDISSSRVLPAKTLVAAKWTVFGRSGHVRVRSKASDPVNAELRFDGFPAADFDRLRDVLKRLF--DVDLTKHAMSSAGTSFGLTDIEDGNMVFRQCILEDADEEGEEFEPRDGDEMMSANLKEISQCVLPGNNR-NEIEMQFHESDAVEAGTDQLVAIRFYIPPDPDADPSELDASTPAELFQQRIMKNANIKRTTGDVIVEIPEAKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLINSGDSSTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGNILDDAPSAPPVYNEDVIYGVPAGAGEMEESSEDESYGTNDEESVESESISGDDDDLGSGFDDSDLEEHRKAAKKSKPEDAKGKEKSNKXXXXXXXPEKEGSSXXXXXXXXXXXXXXDKVAPKKKXXXDPKAPKKGKSAYNYFLTAMRPKIKEQNPDATFGELSTLAGQAWKKVSNEEKEKYEKMAESDAAR 668
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A6U3RIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3RIK7_9STRA) HSP 1 Score: 375 bits (963), Expect = 2.850e-115 Identity = 214/483 (44.31%), Postives = 299/483 (61.90%), Query Frame = 1
Query: 16 IGAQGYSLGSLYLNSDEFVWTSA--------DKSSSKKVKWADVSHATWAQFGDYCHLRFFMKND-------VPPVRLDGFGKAQHPDVEK-FLSGRDIRLSKDRINCGGGNYGELEVLDN--------IVRFSSENRT---------LFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDMDGP-----SPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGET-TKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGA 1347
IG G+S+G+ + W SA D +S+ + V+ A W FG H+R K +R DGF + V K F ++ +++ ++ G ++G + LDN I+ + E + L + +VSQCV+PG + N++ELQ HESD + D LV +R+ +P D DMD +PAE LQ ++ ANI + G V+VEF+ES+GTF PRGRY+IE+Y F+RM G++YDYKI+Y+DISKLFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LV++TTK+++ + VN+ + LQ +Y G+L M G L NL+AK FKV+A K V++ GKF++ VKCAL ANEGHLYPL K F+FIHKP ++ FDE++SVEFQRY G QG+ TRNFDLCV + G+T +K YVFSGIDRS+YT LY+FLS KK++I N + G + A
Sbjct: 14 IGLHGHSVGTFTADPAAIQWKSAMMGASDDDDIVTSRLIPPRSVASAQWTVFGRSGHIRIQQKPGGGSQSAVALELRFDGFPPTDYDKVRKSFQRLYNVDVTRHSMSSCGASFGNTD-LDNRNLVFRQCILEDNDEEGMEVEPQNGDEMMSLQLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVGVRIYIP-PDPDMDPQDNDVQTPAEILQQRIMKMANIKNTTGSVIVEFDESRGTFLTPRGRYTIELYDSFLRMRGNKYDYKIKYDDISKLFLLPKPDDVHMAFVIALDKPIRQGQQRYQMLVMQTTKEQSEVSVNLDEETLQSEYGGDLQPMMYGALSNLVAKTFKVIAKKKVFIPGKFANANQQACVKCALRANEGHLYPLEKQFVFIHKPPVLVRFDEVESVEFQRYAGGQGS--TRNFDLCVTLLNTSGDTGSKEYVFSGIDRSDYTGLYNFLSGKKIKINNFQGVGMEDA 491
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: K0SUI2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUI2_THAOC) HSP 1 Score: 372 bits (954), Expect = 5.340e-115 Identity = 278/662 (41.99%), Postives = 399/662 (60.27%), Query Frame = 1
Query: 4 NFPKIGAQGYSLGSLYLNSDEFVWTSA-----DKSSSKKVKWADVSHATWAQFGDYCHLRFFMK-------NDVPP-VRLDGFGKAQHPDVEKFLSGRD---IRLSKDRINCGGGNYGELEVLDNIVRFSSENRT----------------LFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DMDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGET--TKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGAMLQLGNLDDHDPYKAALDDDQGDDEESEDDADYAPDA---------LGGSDAESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDAPKGAMSAFMQFSQAKRSETKEANPELKITEISKVLGEKWGKMDAEARGPYNKLAQTDKER 1848
++ IG G+++G+ +W S+ D + + + +S A W FG HLR K +P +R DGF + + + L RD + L + ++ G ++G ++ + + F N + L++ +VSQCV+PG + N++E+Q ESD + D LVA+R +P + D D P+ AE+LQ ++ A++ G ++ EF+E +GTF PRGRYSIE+Y F+R+ G++YDYKI+Y+DIS+LFLL + D+ VAFV++LDKPIRQGQQ+Y LV++ TK+ + + +N+ L+++Y G + M G NL+AK FKV+ K V++ GKF+++ VKCAL ANEGHLYPL K FIFIHKP +I FDEI+SVEFQRY G QG+ TRNFDLCV+ S G++ TK Y FSGID+S Y +LYSFLS KK++IKN++ G + D+ DD++ DD + +++A + D+ LG ++ S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX +APK SA++ F+ AKRSE KEANP+ +ISK+LG+ + ++ + PY+++A+ DK R
Sbjct: 7 SWKHIGLYGHAVGTFSATRHGIMWKSSVMGNDDIETKRVLPRESISGALWTVFGKSGHLRVLTKAPREGEQTKLPAAMRFDGFPGTDYEAMSEAL--RDLFGVTLKRHSMSSAGSSWGNTDISNKHLVFRQCNLEDADEDGQEFEPRDGDEMMSLDLGEVSQCVLPGNNR-NEIEMQFLESDTVEAGTDQLVALRFYVPPDADADPTDKDAPTSAEALQSRIMQIASVKKTSGSIIAEFDEGKGTFLTPRGRYSIELYDSFLRLRGAKYDYKIKYDDISRLFLLPRQDDMTVAFVIALDKPIRQGQQRYNMLVMQCTKEHSELNINLDEATLEKEYGGQIEQHMNGSFSNLVAKTFKVITRKKVFIPGKFANSNQQACVKCALRANEGHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGS--TRNFDLCVSLHSTPGDSASTKEYTFSGIDKSNYAALYSFLSGKKIKIKNLEGVGEEPKKPGAPRYDER-----MSDDEESDDSDFDENAPKSDDSXXXXXXXXDLGSVVSDDSDLAEHRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSXXXXXXRDPNAPKAPKSAYVFFTSAKRSEIKEANPDAGFGDISKLLGKAYKELSDAEKEPYDEMARKDKAR 658
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A1E7FQX7_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQX7_9STRA) HSP 1 Score: 367 bits (943), Expect = 8.190e-115 Identity = 208/438 (47.49%), Postives = 280/438 (63.93%), Query Frame = 1
Query: 100 KKVKWADVSHATWAQFGDYCHLRFFM-----KNDVPPVRLDGFGKAQHPDVEKFLSGR-DIRLSKDRINCGGGNYGELEVLDNIVRFSS---ENRT---LFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DMDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGETT--KPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDGAMLQL 1359
K + ++ A W FG HLR + KN +R DGF A D++ F DI +SK I+ G YG+ ++ + F E RT + L++ +VSQCV+PG + N+VELQ ESDA + D LV++R+ +P E D + AE LQ ++ ANI G V+VEF+ +G+F PRGRYSIE+Y F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD + VN+ D L+++Y +L M G L NL+AK FKV+A K V++ GKFS+ VKCAL ANEG LYPL K FIFIHKP +I F+E++SVEFQRY G QG+ TRNFDLCV K+ + + YVFSGIDRS+YT LY+FLSTK +RIKN+++ GA+ Q+
Sbjct: 1 KNIPKGNIEKAGWTVFGKSGHLRIGVIVKEGKNGPSELRFDGFPVASFDDLKDFFQENYDIEVSKHNISSAGTQYGQSKISGKKLLFQHCEFEVRTGDEMMSLDLGEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSVRLYIPPDPEVDPSDKTAKTSAELLQHRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFIFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVTLKASAASISNQQEYVFSGIDRSDYTGLYNFLSTKSIRIKNLQEIS--GAVEQV 433
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A7S1C2J2_9STRA (FACT complex subunit SSRP1 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C2J2_9STRA) HSP 1 Score: 358 bits (920), Expect = 1.370e-111 Identity = 209/490 (42.65%), Postives = 304/490 (62.04%), Query Frame = 1
Query: 16 IGAQGYSLGSLYLNSDEFVWTS------ADKSSSKKVKWAD-VSHATWAQFGDYCHLRFFMKNDVPPVRLDGFGKAQHPDVEKFLSGR-DIRLSKDRINCGGGNYGELEVLDNIVRF-----------SSENRTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DMDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGET--TKPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQSGNDG--AMLQLGNLDDHDPYKAALDD 1404
IG +S+G+L + + W S + S KV AD + A+W FG +LR +R DGF + D+ S + L K + G +YG +V ++++ F + + + L++ +VSQCV+PG + ND+ELQ HESDA + D LV +R +P + D D P+ AE Q S++ +A I + V+V+F+E++G+F PRGRY++E+Y ++RMHG++YDYKI Y DIS+LFLL + +E+ AFV++LDKPIRQGQQ+YQ+LVL+TT ++ + +N+ + L ++Y+G+L ++ G L NL+AK FKV+ K V+V GKF++ G VKCAL ANEG LYPL K F+FIHKP+ ++ FDEI+SVEFQRY G QG+ TRNFDLCV ++ GE+ +K YVFSGIDR++Y +LYSFLS KK+RI NI +G + A + DD+D A DD
Sbjct: 14 IGLHKHSVGTLTADQNALRWKSNTFRDITGATGSVKVTNADDIVDASWMIFGRVGYLRV-RTGGGKELRFDGFPPSDFEDLATVFSNYYNSVLEKKSVAGCGASYGITDVEESVLTFYENEVDEEGADNQRGQEILSLDLTEVSQCVLPGNNR-NDIELQFHESDAGEVGTDQLVQLRFYVPPDPDADQADRDVPTAAELFQKSIMTQARIKNSSMNVIVQFDENRGSFLTPRGRYAMELYDSYLRMHGNKYDYKINYADISRLFLLPRQEEQNKAFVIALDKPIRQGQQRYQYLVLQTTTAQSEVTINLDQETLDREYNGDLQPQVRGSLCNLVAKCFKVITRKKVFVPGKFTNAYGQSFVKCALRANEGSLYPLEKQFVFIHKPSVLVRFDEIESVEFQRYAGGQGS--TRNFDLCVRLLNITGESGGSKEYVFSGIDRTDYNTLYSFLSGKKIRIANIADNGMESGQASARAAMYDDNDTRNDAGDD 499
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Match: A0A7S0TAB4_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TAB4_9STRA) HSP 1 Score: 360 bits (923), Expect = 8.470e-111 Identity = 211/474 (44.51%), Postives = 287/474 (60.55%), Query Frame = 1
Query: 16 IGAQGYSLGSLYLNSDEFVWTSA-------DKSSSKKVKWADVSHATWAQFGDYCHLRFFMK------NDVPPVRLDGFGKAQHPDVEK-FLSGRDIRLSKDRINCGGGNYGELEVLDNIVRFSS-------------ENRT---LFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDE----DMDGPSPAESLQMSVIDRANIHDVKGKVLVEFNESQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAAIVVNMSADDLQQKYDGNLNSEMIGPLHNLIAKIFKVLANKPVYVTGKFSSNGGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVGGETT--KPYVFSGIDRSEYTSLYSFLSTKKLRIKNIKQ 1329
IG G+S+G+ W SA +++ + + + A W FG HLR + N +R DGF A +++ F I +SK I+ G YG+ ++L + F E RT + L++ +VSQCV+PG + N+VELQ ESDA + D LV+IR +P E D S AE LQ ++ ANI G V+VEF+ +G+F PRGRYSIE+Y F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD I VN+ D L+++Y +L M G L NL+AK FKV+A K V++ GKFS+ VKCAL ANEG LYPL K F+FIHKP +I F+E++SVEFQRY G QG+ TRNFDLCV+ K+ + + YVFSG+DRS+YT LY+FLSTK +RIKN+++
Sbjct: 10 IGLHGHSVGTFACGEAGVQWKSALYGRDDTGSGTTRNIPKSLIERAAWTVFGKSGHLRLKVAQQEGKANLHHEMRFDGFPVAAFDNLKDVFQDTYGIEVSKHNISSAGTQYGQSKILGKKLVFQHCILEDADEEGEEFEVRTGDEMMSLDLAEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSIRFYIPPDPEVDPSDRTVKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEIRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKASAASVSNQQEYVFSGVDRSDYTGLYNFLSTKNIRIKNLQE 480 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6716.16249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6716.16249.1 >prot_M-pyrifera_M_contig6716.16249.1 ID=prot_M-pyrifera_M_contig6716.16249.1|Name=mRNA_M-pyrifera_M_contig6716.16249.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=624bp MNFPKIGAQGYSLGSLYLNSDEFVWTSADKSSSKKVKWADVSHATWAQFGback to top mRNA from alignment at M-pyrifera_M_contig6716:4388..13207+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6716.16249.1 ID=mRNA_M-pyrifera_M_contig6716.16249.1|Name=mRNA_M-pyrifera_M_contig6716.16249.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8820bp|location=Sequence derived from alignment at M-pyrifera_M_contig6716:4388..13207+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6716:4388..13207+ >mRNA_M-pyrifera_M_contig6716.16249.1 ID=mRNA_M-pyrifera_M_contig6716.16249.1|Name=mRNA_M-pyrifera_M_contig6716.16249.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3744bp|location=Sequence derived from alignment at M-pyrifera_M_contig6716:4388..13207+ (Macrocystis pyrifera P11B4 male)back to top |