mRNA_M-pyrifera_M_contig67131.16244.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig67131.16244.1 vs. uniprot
Match: A0A7S1CCF8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCF8_9STRA) HSP 1 Score: 217 bits (553), Expect = 5.420e-69 Identity = 99/154 (64.29%), Postives = 119/154 (77.27%), Query Frame = 1
Query: 4 DLMDLRRSPSPRYAASPMEGNLFEWHFTICGPEDTVYEGGVYHGRILFPPDFPLKPPSIIFLTPSGRFQVGVKICLSISAHHPETWSPAWRVRHIMEALISFLPSPAEGAVGSMEADDETRRRHARDSRTWRCLHCGVAADLLPKLEGEALERA 465
DL +LRR PSP Y+A P+E NLFEWHFTI GP DT + GGVYHGRIL P ++PLKPP+I+FLTP+GRFQV KICLSISA+HPE W PAW VR I+EALISFLP+P EGAVGS++ D+ RR+ A +SR WRC CG A LP ++ A +A
Sbjct: 72 DLRELRRDPSPEYSAMPLEDNLFEWHFTIRGPPDTAFAGGVYHGRILLPTEYPLKPPNIMFLTPNGRFQVRKKICLSISAYHPEQWLPAWGVRLILEALISFLPTPPEGAVGSLDFTDDERRKLAAESRAWRCPLCGDPATTLPVVDAAAAAKA 225
BLAST of mRNA_M-pyrifera_M_contig67131.16244.1 vs. uniprot
Match: A0A7S2SCH8_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCH8_9STRA) HSP 1 Score: 211 bits (537), Expect = 1.180e-64 Identity = 95/146 (65.07%), Postives = 113/146 (77.40%), Query Frame = 1
Query: 4 DLMDLRRSPSPRYAASPMEGNLFEWHFTICGPEDTVYEGGVYHGRILFPPDFPLKPPSIIFLTPSGRFQVGVKICLSISAHHPETWSPAWRVRHIMEALISFLPSPAEGAVGSMEADDETRRRHARDSRTWRCLHCGVAADLLPKL 441
D+ +LR S +Y A P+E NLFEWHFTI GP +TV+EGGVYHGRIL P D+PLKPP+IIFLTP+GRF+V KICLSISAHHPE W PAW VR I+EALISFLP+ GAVGS++ E RR+ AR S +W C CG A DLLP++
Sbjct: 29 DIRELREDASDQYTAEPLEDNLFEWHFTIRGPPETVFEGGVYHGRILLPTDYPLKPPNIIFLTPNGRFEVNKKICLSISAHHPEHWQPAWGVRLILEALISFLPTEGNGAVGSLDWSAEERRKLARQSISWTCARCGKAVDLLPEV 174
BLAST of mRNA_M-pyrifera_M_contig67131.16244.1 vs. uniprot
Match: A0A6U5J510_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5J510_9STRA) HSP 1 Score: 208 bits (530), Expect = 2.160e-64 Identity = 91/148 (61.49%), Postives = 115/148 (77.70%), Query Frame = 1
Query: 4 DLMDLRRSPSPRYAASPMEGNLFEWHFTICGPEDTVYEGGVYHGRILFPPDFPLKPPSIIFLTPSGRFQVGVKICLSISAHHPETWSPAWRVRHIMEALISFLPSPAEGAVGSMEADDETRRRHARDSRTWRCLHCGVAADLLPKLEG 447
D+ +L PS +Y A+P+E N+FEWHFTI GP DT +EGG YHGRIL P D+P KPP IIFLTP+GRFQV K+CLSISA+HPE W PAW +R I+EALISFLP+PA+GA+GS+ R+R A+ S ++ C++CG ADLLPKL+G
Sbjct: 13 DMRELASDPSDQYCAAPLEDNMFEWHFTIRGPPDTEFEGGCYHGRILLPADYPFKPPDIIFLTPNGRFQVNTKVCLSISAYHPEFWQPAWGIRLILEALISFLPTPADGAIGSLSWSVPERKRLAKLSTSFHCMYCGNTADLLPKLKG 160
BLAST of mRNA_M-pyrifera_M_contig67131.16244.1 vs. uniprot
Match: A0A7R9U7A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7A5_9STRA) HSP 1 Score: 202 bits (515), Expect = 7.370e-64 Identity = 91/147 (61.90%), Postives = 111/147 (75.51%), Query Frame = 1
Query: 4 DLMDLRRSPSPRYAASPMEGNLFEWHFTICGPEDTVYEGGVYHGRILFPPDFPLKPPSIIFLTPSGRFQVGVKICLSISAHHPETWSPAWRVRHIMEALISFLPSPAEGAVGSMEADDETRRRHARDSRTWRCLHCGVAADLLPKLE 444
D+ +LR+SPS RY A P+E NLFEWHFT+ GP DT +EGGVYHGRIL P D+P KPP+ +FLTP+GRF V KICLSISAHHPE W PAW +R I+EALISF P+ GA+G+++ E RRR A +SR + C HCG ADLL + E
Sbjct: 11 DIRELRKSPSDRYFAEPVEDNLFEWHFTLRGPPDTEFEGGVYHGRILLPSDYPFKPPNFVFLTPNGRFAVNQKICLSISAHHPEYWQPAWGIRLILEALISFFPTEGGGALGALDWPAEERRRLAAESRNFVCRHCGRVADLLTEPE 157
BLAST of mRNA_M-pyrifera_M_contig67131.16244.1 vs. uniprot
Match: A0A6H5LBS4_9PHAE (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LBS4_9PHAE) HSP 1 Score: 202 bits (514), Expect = 9.270e-62 Identity = 85/146 (58.22%), Postives = 113/146 (77.40%), Query Frame = 1
Query: 4 DLMDLRRSPSPRYAASPMEGNLFEWHFTICGPEDTVYEGGVYHGRILFPPDFPLKPPSIIFLTPSGRFQVGVKICLSISAHHPETWSPAWRVRHIMEALISFLPSPAEGAVGSMEADDETRRRHARDSRTWRCLHCGVAADLLPKL 441
D+ +L + PS +Y A+P+E NLFEWHFTI GP DT ++GGVYHGRI+ PP++P +PP I+F TP+GRF G+KICL+IS++HPE W PAW +R I+EALISF PSP+ GA+G ++ R+R A +SR W+C CGV ADLLP+L
Sbjct: 16 DVRELMKDPSDQYHAAPLESNLFEWHFTIRGPPDTEFQGGVYHGRIILPPEYPFRPPDIMFNTPNGRFSTGMKICLTISSYHPEYWQPAWGIRLILEALISFFPSPSHGALGGLDWSAGERKRLAVESRQWKCYKCGVVADLLPEL 161
BLAST of mRNA_M-pyrifera_M_contig67131.16244.1 vs. uniprot
Match: A0A7S4J724_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J724_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.920e-61 Identity = 87/150 (58.00%), Postives = 116/150 (77.33%), Query Frame = 1
Query: 4 DLMDLRRSPSPRYAASPMEGNLFEWHFTICGPEDTVYEGGVYHGRILFPPDFPLKPPSIIFLTPSGRFQVGVKICLSISAHHPETWSPAWRVRHIMEALISFLPSPAEGAVGSMEADDETRRRHARDSRTWRCLHCGVAADLLPKLEGEA 453
D+ +L PS RY A+P+E ++FEWHFTI G +DT +EGG+YHGRIL P ++P KPP I+FLTPSGRF+ G K+CLS SA+HPE W PAW +R I+EALISFLP+PA+GA+GS++ E R+R A+ S + C CG A+LLPK+EG++
Sbjct: 24 DIRELSIDPSDRYHAAPLEDDMFEWHFTIRGADDTDFEGGIYHGRILLPSEYPFKPPHIVFLTPSGRFETGTKVCLSFSAYHPELWQPAWGIRLILEALISFLPTPADGAIGSLDWTKEERQRLAKKSIDFCCPRCGNVAELLPKIEGKS 173
BLAST of mRNA_M-pyrifera_M_contig67131.16244.1 vs. uniprot
Match: H3G6V4_PHYRM (UBC core domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6V4_PHYRM) HSP 1 Score: 193 bits (490), Expect = 1.720e-60 Identity = 85/147 (57.82%), Postives = 114/147 (77.55%), Query Frame = 1
Query: 25 SPSPRYAASPMEGNLFEWHFTICGPEDTVYEGGVYHGRILFPPDFPLKPPSIIFLTPSGRFQVGVKICLSISAHHPETWSPAWRVRHIMEALISFLPSPAEGAVGSMEADDETRRRHARDSRTWRCLHCGVAADLLPKLEGEALERA 465
+PS +YAA+P+E N+F+WHFT+ GP DT +EGG+YHGRI+ P D+P KPP+I+ LTP+GRF+V KICLSISA+HPE W PAW VR I+EALISF+P+ EGA+G+++ E R+R A+ S ++C CG ADLLP++E E E A
Sbjct: 3 NPSDQYAAAPLETNMFDWHFTLRGPRDTEFEGGIYHGRIILPSDYPFKPPNIMLLTPNGRFEVKKKICLSISAYHPEEWQPAWGVRLILEALISFMPTKGEGAIGALDFPAEERKRLAKLSVDYKCETCGRVADLLPEVETENDEEA 149
BLAST of mRNA_M-pyrifera_M_contig67131.16244.1 vs. uniprot
Match: V9E9I6_PHYPR (UBC core domain-containing protein n=19 Tax=Phytophthora TaxID=4783 RepID=V9E9I6_PHYPR) HSP 1 Score: 198 bits (504), Expect = 1.760e-60 Identity = 86/149 (57.72%), Postives = 116/149 (77.85%), Query Frame = 1
Query: 4 DLMDLRRSPSPRYAASPMEGNLFEWHFTICGPEDTVYEGGVYHGRILFPPDFPLKPPSIIFLTPSGRFQVGVKICLSISAHHPETWSPAWRVRHIMEALISFLPSPAEGAVGSMEADDETRRRHARDSRTWRCLHCGVAADLLPKLEGE 450
D+ ++ +PS +YAA+P+E N+F+WHFT+ GP DT +EGG+YHGRI+ P D+P KPP+I+ LTP+GRF+V KICLSISA+HPE W PAW VR I+EALISF+P+ EGA+G+++ E RRR A+ S ++C CG ADLLP+LE E
Sbjct: 16 DVREMMTNPSDQYAAAPLETNMFDWHFTLRGPRDTEFEGGIYHGRIILPSDYPFKPPNIMLLTPNGRFEVKKKICLSISAYHPEEWQPAWGVRLILEALISFMPTKGEGAIGALDFPAEERRRLAKLSVDYKCETCGRVADLLPELESE 164
BLAST of mRNA_M-pyrifera_M_contig67131.16244.1 vs. uniprot
Match: A0A833S8V9_PHYIN (Ubiquitin-conjugating enzyme n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S8V9_PHYIN) HSP 1 Score: 198 bits (504), Expect = 2.390e-60 Identity = 86/149 (57.72%), Postives = 116/149 (77.85%), Query Frame = 1
Query: 4 DLMDLRRSPSPRYAASPMEGNLFEWHFTICGPEDTVYEGGVYHGRILFPPDFPLKPPSIIFLTPSGRFQVGVKICLSISAHHPETWSPAWRVRHIMEALISFLPSPAEGAVGSMEADDETRRRHARDSRTWRCLHCGVAADLLPKLEGE 450
D+ ++ +PS +YAA+P+E N+F+WHFT+ GP DT +EGG+YHGRI+ P D+P KPP+I+ LTP+GRF+V KICLSISA+HPE W PAW VR I+EALISF+P+ EGA+G+++ E RRR A+ S ++C CG ADLLP+LE E
Sbjct: 26 DVREMMTNPSDQYAAAPLETNMFDWHFTLRGPRDTEFEGGIYHGRIILPSDYPFKPPNIMLLTPNGRFEVKKKICLSISAYHPEEWQPAWGVRLILEALISFMPTKGEGAIGALDFPAEERRRLAKLSVDYKCETCGRVADLLPELESE 174
BLAST of mRNA_M-pyrifera_M_contig67131.16244.1 vs. uniprot
Match: K3X061_GLOUD (UBC core domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X061_GLOUD) HSP 1 Score: 196 bits (499), Expect = 6.000e-60 Identity = 83/147 (56.46%), Postives = 113/147 (76.87%), Query Frame = 1
Query: 4 DLMDLRRSPSPRYAASPMEGNLFEWHFTICGPEDTVYEGGVYHGRILFPPDFPLKPPSIIFLTPSGRFQVGVKICLSISAHHPETWSPAWRVRHIMEALISFLPSPAEGAVGSMEADDETRRRHARDSRTWRCLHCGVAADLLPKLE 444
D+ ++ +PS +Y A+P+E N+F+WHFT+ GP DT +EGG+YHGRIL P D+P KPP+I+ LTP+GRF+V KICLSISAHHPE W PAW VR I+EALISF+P+ EGA+G+++ E R+R A+ S ++C CG DLLP+L+
Sbjct: 16 DVREMMTNPSDQYIAAPLESNMFDWHFTLRGPRDTEFEGGIYHGRILLPSDYPFKPPNIMLLTPNGRFEVRKKICLSISAHHPEEWQPAWGVRLILEALISFMPTKGEGAIGALDFPPEERKRLAQQSVAYKCDTCGCIGDLLPELQ 162 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig67131.16244.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig67131.16244.1 >prot_M-pyrifera_M_contig67131.16244.1 ID=prot_M-pyrifera_M_contig67131.16244.1|Name=mRNA_M-pyrifera_M_contig67131.16244.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp MDLRRSPSPRYAASPMEGNLFEWHFTICGPEDTVYEGGVYHGRILFPPDFback to top mRNA from alignment at M-pyrifera_M_contig67131:495..1064+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig67131.16244.1 ID=mRNA_M-pyrifera_M_contig67131.16244.1|Name=mRNA_M-pyrifera_M_contig67131.16244.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=570bp|location=Sequence derived from alignment at M-pyrifera_M_contig67131:495..1064+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig67131:495..1064+ >mRNA_M-pyrifera_M_contig67131.16244.1 ID=mRNA_M-pyrifera_M_contig67131.16244.1|Name=mRNA_M-pyrifera_M_contig67131.16244.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=912bp|location=Sequence derived from alignment at M-pyrifera_M_contig67131:495..1064+ (Macrocystis pyrifera P11B4 male)back to top |