mRNA_M-pyrifera_M_contig6688.16189.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig6688.16189.1
Unique NamemRNA_M-pyrifera_M_contig6688.16189.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: D7FZE6_ECTSI (Eukaryotic translation initiation factor 3 subunit L n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZE6_ECTSI)

HSP 1 Score: 493 bits (1268), Expect = 2.330e-171
Identity = 241/278 (86.69%), Postives = 255/278 (91.73%), Query Frame = 1
Query:    1 SIPANREETQSLDFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQRRS--DSDEPEDAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPS-NVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDAARILNE 825
            S P N+EETQSLDFLLPE+VKDFVFDLHD+MRRAKRV ELEPLYN+ FK +TDAYFKGSTWPEAEVI NQCSNDELFLCFYRELRNRH+FATTN Q  DYL SWENYCRLFDALLDC DTNFVITE WAFDLVHEFVYQFQSFCQM+GQRR     +E EDAWAVQNVIGYLHGLIKVSNI+P L+AK+RP+ NVAVPAAPSQLHQM GYFAIVGMSRLQCLLGDYYECIKVLEAIDITDK+ LFA NMLAFVTVHQHAGLAFLMLKRYKDAARIL+E
Sbjct:   28 STPQNKEETQSLDFLLPESVKDFVFDLHDAMRRAKRVDELEPLYNTTFKAVTDAYFKGSTWPEAEVIANQCSNDELFLCFYRELRNRHMFATTNVQMPDYLRSWENYCRLFDALLDCRDTNFVITEEWAFDLVHEFVYQFQSFCQMKGQRRGGESEEELEDAWAVQNVIGYLHGLIKVSNIMPILEAKKRPAANVAVPAAPSQLHQMAGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKNELFAGNMLAFVTVHQHAGLAFLMLKRYKDAARILSE 305          
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: A0A835YSE4_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSE4_9STRA)

HSP 1 Score: 288 bits (738), Expect = 8.370e-92
Identity = 136/268 (50.75%), Postives = 182/268 (67.91%), Query Frame = 1
Query:   22 ETQSLDFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQRRSDSDEPEDAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDAARILNE 825
            E + LDF +   VKDFVFDLHD+MRR+ ++ ELE LY   F+KL+D Y+K   WP A+VI NQC  D++FL FY E+R RH+         D   +W NYCRLFD LL+C DT+F+IT  WAFD+++EFVYQ                   D WAVQNV+ YLHGLI  SNI   ++A++  +    P +PSQLHQM GY+ ++GMSRL CL+GDY++C+  L  +D+TD+  LF SNM A+V+++ H GL+FLMLKRY+DAAR+L+E
Sbjct:    5 EEKPLDFDVVSAVKDFVFDLHDAMRRSLQLEELETLYTVTFRKLSDDYYKIGPWPAADVISNQCGEDQIFLQFYSEMRLRHMNVHLKITIHDRFEAWANYCRLFDVLLECRDTDFIITSTWAFDIINEFVYQ-------------------DVWAVQNVVSYLHGLITKSNIGAIMEARR--TGATAPKSPSQLHQMMGYYGLIGMSRLHCLMGDYHQCLSTLAPLDVTDRSDLFGSNMHAYVSLYMHMGLSFLMLKRYRDAARVLSE 251          
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: A0A7S3XNM3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNM3_HETAK)

HSP 1 Score: 254 bits (648), Expect = 6.550e-78
Identity = 128/267 (47.94%), Postives = 176/267 (65.92%), Query Frame = 1
Query:   37 DFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSD-TNFVITEGWAFDLVHEFVYQFQSFCQMRGQ--RRSDSD-----EPEDAWAVQNVIGYLHGLIKVSNIVPFLDA---KQRPSNVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKD 804
            DF+LP+ V+DF+F+LH + R  + + +++ LY+ +F+ L++AYFK + WP AEV      +D LFL FY ELR RHLFAT      D L +W +YC LFDALL+     + ++T  WAFD+VHEFVYQFQSFCQ R Q  RRS++D     E   AWAVQ+V+ YLH L +VSN+V  ++A   +Q P     P   S +H M GYF++VG+SRL+CLLGDY+  ++VL  ID  DK  LF S++   + +  H G A LML+RY+D
Sbjct:   59 DFMLPDAVRDFIFNLHQACRETQIMEDIQQLYDGQFRALSEAYFKQAPWPPAEVAARTVGDDPLFLAFYSELRCRHLFATLKITVADRLEAWSHYCELFDALLEAEGGDDLLVTAQWAFDIVHEFVYQFQSFCQFRCQVDRRSEADLAALREAGGAWAVQSVLTYLHRLARVSNVVAIMEAHRHRQPP-----PPGVSNVHLMLGYFSLVGLSRLECLLGDYHAALEVLGPIDTADKSELFTSSLACHLNLFYHTGFAQLMLRRYRD 320          
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: A0A7S2S5S7_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5S7_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.040e-63
Identity = 113/280 (40.36%), Postives = 165/280 (58.93%), Query Frame = 1
Query:   37 DFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYF--KGSTWPEAEVIQNQCSN-----DELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQ-RRSDSDEPE------DAWAVQNVIGYLHGLIKVSNIVPFLDAK---QRPS---NVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDAARI 816
            DF + + +KDFVFD+  S R + R  E++ LY  +F +L+  Y+  K +TWP  + I +         DE FLCFY+E+  R+LF       +D + +W NYC LFD ++   D   V  E W FD+++EF+YQFQ+FCQ R    R + +E E       AWAVQ+V  YL  LI+VSN+   L+A    Q PS   +V+    PS+LH   GYFAI G+SRL+CLLGDY+ C+ VL+ ID+     ++      ++ ++ H G A+LM++RYKD  R+
Sbjct:   11 DFPVNDAIKDFVFDMRQSCRMSLRQDEVDALYGIKFPELSRTYYGEKDATWPGVDAIASMAETKDRTPDEYFLCFYKEMTYRYLFQHGKPSVQDRIDAWNNYCSLFDFVIAAQDVEMVANEQWTFDIINEFIYQFQAFCQYRTDLTRREPEEIEVLKANPSAWAVQSVAMYLKQLIQVSNVTSILEAHRQIQTPSQYIDVSSQTTPSKLHFDLGYFAIFGLSRLECLLGDYHACLSVLDPIDVFSGQEIYHKVFACYLNLYYHMGFAYLMMRRYKDCIRV 290          
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: A0A7S3GPW5_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GPW5_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.130e-59
Identity = 105/271 (38.75%), Postives = 159/271 (58.67%), Query Frame = 1
Query:   34 LDFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQRRSDSDEP-------EDAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDAARILNE 825
            +DF LP  +KDF+FDLHD+ RR+ R+ E++ LY+++FK++TD YF  S WPE +VI ++  NDE FL FYRE+  RH+      Q  D++ASW+NY +LFD +L+  + +  ++  W  D+V EFVYQFQ FCQ R Q  S + E         DAW +  V+  L  LI+ S      ++     N    A P       GYFA + ++RL+CL GD+   +  + A+ ++D+  LF    L    V  HAG++ L+L+++  AA +L+E
Sbjct:    4 VDFNLPSVIKDFLFDLHDATRRSARIDEVQRLYDAKFKEITDKYFAQSPWPETKVIASEVGNDEGFLVFYREMAMRHVTTKLKPQLADHIASWKNYVQLFDIVLNTKEEDLCLSTQWICDIVLEFVYQFQGFCQFRSQVTSLNAETIKVLEANRDAWNLPEVVSILKKLIRASK-----NSSSAGKNTPFNAGP--FIAQFGYFATIELARLECLTGDFTASLSTISALKLSDRSELFVQLPLCHFNVFYHAGVSNLLLRKFSTAADVLSE 267          
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: F0XXG4_AURAN (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XXG4_AURAN)

HSP 1 Score: 202 bits (515), Expect = 3.600e-58
Identity = 113/269 (42.01%), Postives = 147/269 (54.65%), Query Frame = 1
Query:   37 DFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQC-----SNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQRRSDSDEPED-------AWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDA 807
            DFL+ + +KDF FDLHD+ RR+    +++ LY  EFK+L++ Y     WP AE I +QC     + D  FLC YREL  RH+FA      ED LA+W NY  LFD +L   D    ++  W FD++HEFVYQFQSFCQ R Q    S E           W    V+GYL  L ++        A   P+  A   APS LH   GYFA +  SR++CLLGDY   +  L A+D  D+ A FA      + V  H G + +MLKRY+DA
Sbjct:    8 DFLVNQQIKDFAFDLHDATRRSHLAEDIKRLYTVEFKELSEKYCDKQPWPVAEAIASQCIGNDGAPDAYFLCVYRELMFRHMFAKLKTTLEDRLAAWANYRALFDFVLAGDDAATELSSQWVFDILHEFVYQFQSFCQYRTQNSGRSAEERSLLEASDACWHAPTVLGYLLRLAELGR------AADGPAGRA--RAPSPLHYQMGYFATISRSRVECLLGDYEASVAALGAVDPFDEGAEFAKIFSCRLNVLYHLGYSLMMLKRYRDA 268          
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: A0A7S3ZVD0_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVD0_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.600e-54
Identity = 106/271 (39.11%), Postives = 146/271 (53.87%), Query Frame = 1
Query:   37 DFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSN-----DELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQRRSDSDEPE-------DAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDAAR 813
            D+L+ + +KDFVFDLHD+ RR+    +L+ LYN EFK L+D Y   + WP A  + +QC       D  FLC Y+EL  RH+FA      +D L +W NYC LF+ +L   D +  +T  W FD++HEFVYQFQSFCQ R Q    + E         DAWA   V+ YL    ++    P           A   A S LH     FA V +SR +CLLGDY   ++ L+ ID+ D+ +  +      + +  H G A +ML+RY+DA R
Sbjct:    7 DYLVNQQIKDFVFDLHDASRRSHIAEDLKRLYNLEFKDLSDKYCDKAPWPSAPAVSSQCIGNDGQPDAYFLCVYKELVYRHMFAKLKTSLDDKLNAWNNYCELFEFVLASEDASLELTAQWVFDVLHEFVYQFQSFCQFRCQNAGRNSEERMKLEAAGDAWAAPTVLRYL---ARLRGCAP------TGGMAAKAQARSPLHFYYATFASVCLSRAECLLGDYEASVQALDGIDVFDEASEVSRIFGCRLNMLYHLGYALMMLRRYRDALR 268          
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: A0A7S0GKJ9_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKJ9_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.220e-53
Identity = 109/298 (36.58%), Postives = 153/298 (51.34%), Query Frame = 1
Query:   34 LDFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDT---------NFVITEGWAFDLVHEFVYQFQSFCQMRGQRRSDSDEP---------------------------EDAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDAARIL 819
            +D  LP  +KDFVFDLHDS RR+  V E E LY  EF++LT  YF  + WP  + + ++C  D LFL  Y+EL +RHL + +  Q  D +  W  Y  LFD LL  +D             I   WAFD++HEFVYQFQ FCQ R    S++ +                             DAWAV+ V+ YLH L+  +                   AP++ H   G FA V +SR++CLLGDY  C+  +  I   ++ A+  +   A +++  HAG+++LML+RY+DAAR L
Sbjct:    4 IDACLPAPLKDFVFDLHDSARRSFVVTEQEALYTGEFRELTSKYFSNTAWPSTDSVSSECGADPLFLALYKELTHRHLHSISRPQVRDRIDGWRVYRALFDQLLKEADAASEEGAEVQELYILPTWAFDIMHEFVYQFQGFCQFRTTSASNASQAAKKEDDGNNGQNKSHHLNETMDVLTSNRDAWAVETVLFYLHRLVVFAG----------------GNAPTKAHYHLGVFARVALSRMECLLGDYRACLSAVSPI--VEERAVVDTVFSARLSLAYHAGVSYLMLRRYRDAARTL 283          
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: A0A7S1FPR6_9STRA (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FPR6_9STRA)

HSP 1 Score: 191 bits (486), Expect = 1.340e-53
Identity = 116/312 (37.18%), Postives = 165/312 (52.88%), Query Frame = 1
Query:    7 PANREETQSLDFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEG-------WAFDLVHEFVYQFQSFCQMR----GQRRSDSD---EPEDAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPAAPSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAI----------------------DITDKDALFASNMLAFV----TVHQHAGLAFLMLKRYKDAARILN 822
            P         D  +P+TVK+FVFDLHD+ RR++   E   LY  E++ L + YF    WP +  I ++C+ D +FL  Y EL  RH   T      D + SW  Y  LFD LL+ ++     T G       WAF  V+EFVYQFQ+FCQ R    G++  +     E  DAWAV+ V+ YLHGL++++ +    DA         PAA +Q H++ G +A VG+SRL+CLLGDY  C+  L+ +                       +T K A FA  +   V    TV  HAG+++L+L+RY+DAARI++
Sbjct:    6 PPKAASADERDACIPDTVKNFVFDLHDACRRSQSAVEARNLYVVEYRSLCEKYFSNCAWPSSSGISSECNADPIFLALYGELTTRHYHGTCRTTVADRIDSWSTYRHLFDTLLNLANDPGADTMGGLYVPAEWAFAAVNEFVYQFQAFCQFRTNVVGRKEHEMKVLRENRDAWAVETVMFYLHGLVRIAGLDGEEDA---------PAA-TQGHRVFGTYAAVGLSRLECLLGDYTSCLAALKPLRHVMHSIIHPPPLPLENSTGGPPVTPKTA-FADPLHGIVPARATVAYHAGVSYLLLRRYRDAARIMS 306          
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Match: M2Y1Y0_GALSU (Eukaryotic translation initiation factor 3 subunit L n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y1Y0_GALSU)

HSP 1 Score: 183 bits (464), Expect = 1.640e-50
Identity = 89/273 (32.60%), Postives = 152/273 (55.68%), Query Frame = 1
Query:   40 FLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKKLTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDYLASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQRRSDSDEP-------EDAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPA------APSQLHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFVTVHQHAGLAFLMLKRYKDAARIL 819
            F++PE+V+ F+       R    V E+  LY + F + ++ YFK ++WP  E+      NDE+FL FY+EL  RH+++         + +W+NYC LF+ +L+    +F +   W +D+  EF+YQF+++C  R + ++ ++E        E  W V  ++ YLH ++  SNI P+L     P   + P       +   +++  GYF+I+G+ R+ CLLGDY   + VL+ +D  D  ALF      +++++ +   AFLML+RY+DA R+L
Sbjct:   38 FVVPESVQQFLSYFRQKFREGN-VSEVHTLYETSFNRYSERYFKTTSWPNPEIAAKYVDNDEVFLLFYKELYYRHIYSRLQPTLAQRVEAWDNYCDLFNFILNDGIVDFDLPPSWLWDITDEFIYQFETWCHYRNRLKNKTEEELAYLKDNEHIWNVNFLLQYLHAMVNKSNICPWLLNGNEPVGSSDPDDDDFDYSTIPVYRFLGYFSIIGLLRVHCLLGDYKLALMVLQPLDFDDNTALFTRVTACYISLYYYMTFAFLMLRRYEDAVRVL 309          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6688.16189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZE6_ECTSI2.330e-17186.69Eukaryotic translation initiation factor 3 subunit... [more]
A0A835YSE4_9STRA8.370e-9250.75Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S3XNM3_HETAK6.550e-7847.94Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2S5S7_9STRA1.040e-6340.36Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S3GPW5_9STRA1.130e-5938.75Eukaryotic translation initiation factor 3 subunit... [more]
F0XXG4_AURAN3.600e-5842.01Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S3ZVD0_9STRA1.600e-5439.11Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S0GKJ9_9STRA1.220e-5336.58Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S1FPR6_9STRA1.340e-5337.18Eukaryotic translation initiation factor 3 subunit... [more]
M2Y1Y0_GALSU1.640e-5032.60Eukaryotic translation initiation factor 3 subunit... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6688contigM-pyrifera_M_contig6688:9824..13608 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score495.7
Seed ortholog evalue1.4e-137
Seed eggNOG ortholog2880.D7FZE6
Preferred nameEIF3L
KEGG koko:K15029
Hectar predicted targeting categoryother localisation
GOsGO:0001650,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005852,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016032,GO:0019080,GO:0019081,GO:0019538,GO:0031974,GO:0031981,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0051704,GO:0070013,GO:0071704,GO:0075525,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.translation initiation factor activity
EggNOG OGsKOG3677@1,KOG3677@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03012
Exons5
Model size826
Cds size825
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6688.16189.1prot_M-pyrifera_M_contig6688.16189.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig6688 9824..13608 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816559.0030396-CDS-M-pyrifera_M_contig6688:9823..101051622816559.0030396-CDS-M-pyrifera_M_contig6688:9823..10105Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6688 9824..10105 +
1692278046.3201253-CDS-M-pyrifera_M_contig6688:9823..101051692278046.3201253-CDS-M-pyrifera_M_contig6688:9823..10105Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6688 9824..10105 +
1622816559.0135524-CDS-M-pyrifera_M_contig6688:10905..110701622816559.0135524-CDS-M-pyrifera_M_contig6688:10905..11070Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6688 10906..11070 +
1692278046.3318303-CDS-M-pyrifera_M_contig6688:10905..110701692278046.3318303-CDS-M-pyrifera_M_contig6688:10905..11070Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6688 10906..11070 +
1622816559.0265987-CDS-M-pyrifera_M_contig6688:11566..116711622816559.0265987-CDS-M-pyrifera_M_contig6688:11566..11671Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6688 11567..11671 +
1692278046.3452735-CDS-M-pyrifera_M_contig6688:11566..116711692278046.3452735-CDS-M-pyrifera_M_contig6688:11566..11671Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6688 11567..11671 +
1622816559.0378258-CDS-M-pyrifera_M_contig6688:11999..121231622816559.0378258-CDS-M-pyrifera_M_contig6688:11999..12123Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6688 12000..12123 +
1692278046.355391-CDS-M-pyrifera_M_contig6688:11999..121231692278046.355391-CDS-M-pyrifera_M_contig6688:11999..12123Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6688 12000..12123 +
1622816559.0501318-CDS-M-pyrifera_M_contig6688:13459..136081622816559.0501318-CDS-M-pyrifera_M_contig6688:13459..13608Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6688 13460..13608 +
1692278046.3646858-CDS-M-pyrifera_M_contig6688:13459..136081692278046.3646858-CDS-M-pyrifera_M_contig6688:13459..13608Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6688 13460..13608 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig6688.16189.1

>prot_M-pyrifera_M_contig6688.16189.1 ID=prot_M-pyrifera_M_contig6688.16189.1|Name=mRNA_M-pyrifera_M_contig6688.16189.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=275bp
SIPANREETQSLDFLLPETVKDFVFDLHDSMRRAKRVHELEPLYNSEFKK
LTDAYFKGSTWPEAEVIQNQCSNDELFLCFYRELRNRHLFATTNAQKEDY
LASWENYCRLFDALLDCSDTNFVITEGWAFDLVHEFVYQFQSFCQMRGQR
RSDSDEPEDAWAVQNVIGYLHGLIKVSNIVPFLDAKQRPSNVAVPAAPSQ
LHQMCGYFAIVGMSRLQCLLGDYYECIKVLEAIDITDKDALFASNMLAFV
TVHQHAGLAFLMLKRYKDAARILNE
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mRNA from alignment at M-pyrifera_M_contig6688:9824..13608+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig6688.16189.1 ID=mRNA_M-pyrifera_M_contig6688.16189.1|Name=mRNA_M-pyrifera_M_contig6688.16189.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3785bp|location=Sequence derived from alignment at M-pyrifera_M_contig6688:9824..13608+ (Macrocystis pyrifera P11B4 male)
TCCATCCCAGCGAACCGGGAGGAAACCCAGTCGTTGGATTTCCTCCTGCC GGAAACCGTGAAGGACTTCGTGTTTGACTTGCACGACTCCATGCGAAGGG CCAAGAGGGTTCACGAGCTAGAGCCGCTGTACAACTCCGAGTTCAAGAAG TTGACAGACGCCTACTTCAAGGGGAGTACCTGGCCGGAGGCGGAGGTTAT CCAGAACCAATGCAGCAATGACGAGTTGTTCCTCTGCTTCTACCGAGAGC TCCGCAACCGGCACCTCTTCGCCACTACCAATGTGAGGGTTTCAACATGC GCTGCGCGTTGAGGCGTTGCGGTGGGAGGGATGGGTGGGGGGGGAGAGGG GGGAGGAGGGGGAGGGGGGCATCCGACAAGGTGCTATTACCGGGGGACCA TAGTAAATAGCACCAAGTATTGTTAGCAAAAATAGGTAAATATATAGGTT TTCGTGTACACCGTAGGTCCTATTTACCATGGTCCTCCGTAATAAAGTCA TATGGGGGGAGGCGGGGGGGAAGTGGTGACGACACCAAATTTTTTCGTAA GATATTTGGCAATGACGACATGGACGACGCCAAATATGAAGATTTTAAAC TAACACTAGACCAACGCTTTTGGAACTTGATTGTAGTGTAGCGACCTCAA CAACAAGAAGTGCCTGCCGCGGTACAAACATCATGAATGTTCTACGGGCC TGTTGTGCATCGGAAGGTCCTTCCGATGCACTTCGGCCGCATCAATTGGC TATCCCGTGTACAAACATCCCGGGCTGCTTCGTGTGTCCTAAACGTCATT TTCGTTTTCGCATGTTTCTACCGCTGGGCACCACTTGGGGCTCTAATTTG GAAATTATAGTGTTGTCCGATAGTGCTCCCATTAACGCCAAGCTAAATGT CCGAAGAGATTGCCCCTCTGAAATGGAGGTAAACGTCCGACCGGTTCCCT CCAGTAGAAGTTGCCCAGCATTTTATCTAGCAGTCACGTATACACCTGGT ATGTACGAGTACTATCGTCAAACTATAATGGAGTCCCACAAGGCTTATTA ATCTCGATATGAATGCCTCAATCGTTTGACAGGCCCAGAAGGAGGACTAC CTGGCGTCGTGGGAGAACTACTGCCGGCTGTTCGACGCGCTCCTCGATTG CAGCGACACTAACTTTGTCATCACCGAGGGCTGGGCGTTCGACCTCGTGC ACGAGTTCGTGTACCAGTTCCAGTCCTTCTGCCAGATGAGAGGGCAGGTG CGCTATGCATGATGCGGTGTGAATGTACTGCTGTGTTAATGTACTGTACT GCTGTGCTGTGCTGTGCTGTGCTGTGCTGTGCTGTGCTGTGCTGTGCTGT ACTGTACTGTACTGCACTGTATCCGATCCACCTCAACGGCACTTACGCTA TCAACTGCAACGACGTTGATCCGATCCACGCCAACGGCACTGATCCGGCG CACTTCGACGGCTTTTGGTCCGATCCACCTCAACGGTATTGATCCAATCC ACCTACTCAACGTTACTGGTGCAACCCCCATCAACGACATTTGATTCGAT CCACGTCAACGACGTCGATCCGACGTATTTTAACGGCATTGGTCCGACCC ATCTGACCGGTATTGGTCTGATCCACCTCACATGCACTGATGCAACCCAC CTCAGCGGCATTTGATCTGATCCACGGTCGTCTTGTTTGTTTTTTGTTTC TTTCCTCCTGTTACGTTTTGTTTTGTTTTATTTTGTTTGGCAGCGCCGGA GTGACTCGGACGAGCCGGAGGACGCGTGGGCTGTTCAGAACGTGATCGGC TACCTGCACGGCCTCATCAAGGTCTCCAACATCGTCCCTTTCCTCGATGT GAGTGTTGATACTGATTTGCCCTTGGCTTGTCTTGGTTTGGATTTGTTTT GGCTATGTCTTCGATGGGAGTGGCTTAGCTTGGCAATTGGCTTGACGATT GGCTTGGACTGCCTTTCCTCTCCTTGCCTTGCCTTGCCTTGCCTTGCCTT GCCTTGCCTTGCCTTGCCTTGCCTTGCCTTGCCTTGCCTTGCCTGGCGTT GCCTTGCCTCGCCACCGTCGGAACTTGTCGAGACTGTTTTCTCTTCTCCC CTTCTCGTTTTTTGTCTCAACCTCGTCCTTGTTTTTTCTTCTTTTTTGTC CACTAACATACCGCAACGTGCGGCAGGCGAAGCAGAGGCCGTCGAACGTA GCGGTGCCCGCCGCCCCCTCCCAGCTCCACCAGATGTGCGGCTACTTCGC CATCGTCGGCATGTCGCGACTGCAGTGCCTGCTCGGGGACTACTACGAGT GTGAGTGAATATGCGGATACCGCCCCCCCCCCTATATACTGCTATGGTCA TACGACTACGGCCGTGCATGAGGTCGAGTGCATCTCTCCTATAGAGTACA TCCCACCCTATATACTGTACTGCGGTATAATAGTTGGGTTGACGTCGGTT GGCAACGACACTGTAAAACATGCCCCTCATCACTTGAGCTAGACAACCAG GGCATCGTTTTTGTTTTGTATTTTTTCAGCGGTCGGTCTCAGCTGGTGGT CGAGTTGGATCATTTGTGCGGGGTGAAGAACCTTGACAAGGGGAATGATC GTGTCACGTAGTGTTTTATGATGAGGCACCCCCGTTGCTGTCTCTGGAAG TGGCGACACCGAAAATTAAATTAAATCAATGAAACTGTCATCCTTATGTA AGAGTGTCCGCCTCACAAGCGGCTCATAGTAGGATGCAGCTCACCCTTCG TGCGACTCGCGGGACACCTCACGGCGCTTCGCGCTTGGTACAAGCAACGT CTGCCTGGTCAGCGAAAACCCGACGTGCTCCGTCCCGGCAATGTAGGAAT GCGAGGGTCTATGGTCATACAACTACGGCCATGCATGATATCCGGCGGAC CCCTCTCTTACACTTATGGAACTCCCTCTCCCCACCCGCTTCCGCTTAAA ACCTCCCACCCCCTCCCACCTCCCCTCCCCATCCCTTCCCCAACCCCTCC CACATTCTACATTCAACCCCGTTCCCCCCTCCCCCCCCACCACCACACAC CCACACCCTCGAAACGAGGGCTGTATACATCTTGGCATAGCTTCGGCGAA AATGTTAAAATATTGTTGTGTTTCGAAACGCTAACTCCGTCACCATAGTC TCTATAGGACTGAAGTCCCGATGTGGGGGAAAAAAAAACACGTGGAATCG TAATCAGATTTAGGTTTCTGTACGGCGCAGTACTAAAAGGGTTACTTGTA CCTCTCTGGGCGGAAATATAGGGACCGTTTGTACAGTAATATCAATACTA AGCGGTGCTTCTGTTTACGCCCAGAGTGATACAGCCTTCGCCGCCTGGGA AATTTCTCGGAAAGAAAGTAAATGAGGAGGTAGTGCGGACGGACTATAAA TCAACCATTTTGTCGAAGAATTAGTGGGGAGTTTAGTGTGGACCGTCAAC CATTTTGTCCAAGAACTAGCGAGGAGTTTCGGTAGGGTGGACGATGGATC AACCACTTTTGTCGAAGCTCGGCCAAGTCGTAAACTCTGCTGCTCGAAAG CCCTTTCAAAAACGCCTCTCACCGCTCCCGTCACCCCCATCCCCACCCCC ACCTCCACCCCCCCCCCTCCACCGCCCTCGGCGCAGGCATCAAGGTGCTC GAGGCGATCGACATCACCGATAAGGATGCTCTGTTCGCCTCCAACATGCT GGCCTTCGTCACCGTCCACCAGCACGCGGGGCTAGCGTTTCTCATGCTCA AGCGCTACAAGGATGCCGCGCGCATCCTCAACGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig6688:9824..13608+

>mRNA_M-pyrifera_M_contig6688.16189.1 ID=mRNA_M-pyrifera_M_contig6688.16189.1|Name=mRNA_M-pyrifera_M_contig6688.16189.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1650bp|location=Sequence derived from alignment at M-pyrifera_M_contig6688:9824..13608+ (Macrocystis pyrifera P11B4 male)
TCCATCCCAGCGAACCGGGAGGAAACCCAGTCGTTGGATTTCCTCCTGCC
GGAAACCGTGAAGGACTTCGTGTTTGACTTGCACGACTCCATGCGAAGGG
CCAAGAGGGTTCACGAGCTAGAGCCGCTGTACAACTCCGAGTTCAAGAAG
TTGACAGACGCCTACTTCAAGGGGAGTACCTGGCCGGAGGCGGAGGTTAT
CCAGAACCAATGCAGCAATGACGAGTTGTTCCTCTGCTTCTACCGAGAGC
TCCGCAACCGGCACCTCTTCGCCACTACCAATTCCATCCCAGCGAACCGG
GAGGAAACCCAGTCGTTGGATTTCCTCCTGCCGGAAACCGTGAAGGACTT
CGTGTTTGACTTGCACGACTCCATGCGAAGGGCCAAGAGGGTTCACGAGC
TAGAGCCGCTGTACAACTCCGAGTTCAAGAAGTTGACAGACGCCTACTTC
AAGGGGAGTACCTGGCCGGAGGCGGAGGTTATCCAGAACCAATGCAGCAA
TGACGAGTTGTTCCTCTGCTTCTACCGAGAGCTCCGCAACCGGCACCTCT
TCGCCACTACCAATGCCCAGAAGGAGGACTACCTGGCGTCGTGGGAGAAC
TACTGCCGGCTGTTCGACGCGCTCCTCGATTGCAGCGACACTAACTTTGT
CATCACCGAGGGCTGGGCGTTCGACCTCGTGCACGAGTTCGTGTACCAGT
TCCAGTCCTTCTGCCAGATGAGAGGGCAGGCCCAGAAGGAGGACTACCTG
GCGTCGTGGGAGAACTACTGCCGGCTGTTCGACGCGCTCCTCGATTGCAG
CGACACTAACTTTGTCATCACCGAGGGCTGGGCGTTCGACCTCGTGCACG
AGTTCGTGTACCAGTTCCAGTCCTTCTGCCAGATGAGAGGGCAGCGCCGG
AGTGACTCGGACGAGCCGGAGGACGCGTGGGCTGTTCAGAACGTGATCGG
CTACCTGCACGGCCTCATCAAGGTCTCCAACATCGTCCCTTTCCTCGATC
GCCGGAGTGACTCGGACGAGCCGGAGGACGCGTGGGCTGTTCAGAACGTG
ATCGGCTACCTGCACGGCCTCATCAAGGTCTCCAACATCGTCCCTTTCCT
CGATGCGAAGCAGAGGCCGTCGAACGTAGCGGTGCCCGCCGCCCCCTCCC
AGCTCCACCAGATGTGCGGCTACTTCGCCATCGTCGGCATGTCGCGACTG
CAGTGCCTGCTCGGGGACTACTACGAGTGCGAAGCAGAGGCCGTCGAACG
TAGCGGTGCCCGCCGCCCCCTCCCAGCTCCACCAGATGTGCGGCTACTTC
GCCATCGTCGGCATGTCGCGACTGCAGTGCCTGCTCGGGGACTACTACGA
GTGCATCAAGGTGCTCGAGGCGATCGACATCACCGATAAGGATGCTCTGT
TCGCCTCCAACATGCTGGCCTTCGTCACCGTCCACCAGCACGCGGGGCTA
GCGTTTCTCATGCTCAAGCGCTACAAGGATGCCGCGCGCATCCTCAACGA
GGCATCAAGGTGCTCGAGGCGATCGACATCACCGATAAGGATGCTCTGTT
CGCCTCCAACATGCTGGCCTTCGTCACCGTCCACCAGCACGCGGGGCTAG
CGTTTCTCATGCTCAAGCGCTACAAGGATGCCGCGCGCATCCTCAACGAG
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