mRNA_M-pyrifera_M_contig66807.16177.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig66807.16177.1
Unique NamemRNA_M-pyrifera_M_contig66807.16177.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig66807.16177.1 vs. uniprot
Match: R1C6H3_EMIHU (DNA topoisomerase 2 n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C6H3_EMIHU)

HSP 1 Score: 185 bits (469), Expect = 4.580e-49
Identity = 117/273 (42.86%), Postives = 160/273 (58.61%), Query Frame = 1
Query:    7 ISELPIRKWTSDYK-AFLETLTPEAEKQLEKAKGKGKKAAMSGPLVKEIRENHTDTSVSFALRLTEQGRRLAENPAALRRRLKLSTTVSTTNMTLFDARGRIARYESATHILRAFFPLRRRYYSKRKEHMLSVLQEELRVLDGRVRFIRSVVDGELVVSRRSKSDIVAELHAKAFPEVLTASARAATS---RKKRQSMALGGVESDDXXXXXXEIDGRGYNYLLSMPIYSLTKEKMLKLQEAAADKRAEVMDLEEQTPESLWERDLDALEAEL 813
            ISELP+RKWT DYK   LE +  +      +A G  K A ++G L  E+RENHTDT+VSF L+        A N   L + LKLS+++ST+NMTLFDA+GRI +YE+   +LR F+ LR  +Y KRK H+   L  E   LD R+RF+ +V+ GEL ++ R K+D+VAEL  K +     A  RAA      ++    A GG  +            RGY+YLLSMP++SLT+E++ +L+     K AE+  L   +P  LW  DLDA EA L
Sbjct:  901 ISELPVRKWTQDYKETVLEPMMSD------RADGAAKSAELAGALA-ELRENHTDTTVSFTLKFASDAAAAAANKVGLHKALKLSSSISTSNMTLFDAQGRIQKYEAVEAVLRDFYALRLSFYEKRKLHLQDKLTGEWSKLDNRMRFVLAVISGELKIANRKKADLVAELAQKGYAPFEPAPKRAAAGDDGEEEAAGEAEGGASAS----------ARGYDYLLSMPLWSLTRERVEQLRGECTAKEAELQTLLATSPRQLWAADLDAFEAGL 1156          
BLAST of mRNA_M-pyrifera_M_contig66807.16177.1 vs. uniprot
Match: A0A7R9ZGL7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZGL7_9STRA)

HSP 1 Score: 171 bits (434), Expect = 1.980e-44
Identity = 115/291 (39.52%), Postives = 164/291 (56.36%), Query Frame = 1
Query:    7 ISELPIRKWTSDYKAFLETLTPEAEKQLEKAKGKGKKAAMSGPLVKEIRENHTDTSVSFALRLT-EQGRRLAENPAALRRRLKLSTTVSTTNMTLFDARGRIARYESATHILRAFFPLRRRYYSKRKEHMLSVLQEELRVLDGRVRFIRSVVDGELVVSRRSKSDIVAELHAKAFPEVLTASARAATSRKKRQSMALGGVESDDXXXXXXEID-GRGYNYLLSMPIYSLTKEKMLKLQEAAADKRAEVMDLEEQTPESLWERDLDALEAELDAMDVERAAALAQEARARRA 873
            I+ELPI+KWT DYK FLE L  + +K         K A +    +K+ +ENHTDT+VSF +  T E+     +    L  + KL  ++ST+NM LFD RGRI +Y S   IL+ F+ LR  +Y KRKEH+L +L+ E+R+L  + RF+  V  G+LVVS R ++DI+A+L  + + E  T          K       G ESD+      + +  +GY+YLL M I+SLT EK  +L+    +K+  V DLE   P ++WE DLD +   LDA+D    A  A E   R+A
Sbjct:  524 ITELPIKKWTQDYKVFLEGLLTKDDKN--------KSAELD---IKDFKENHTDTTVSFTITATKEKIDSFEKGKDGLYGKFKLGGSISTSNMNLFDDRGRIIKYSSPESILQTFYDLRLDFYCKRKEHLLKILRREMRMLSNKARFVEEVCSGDLVVSNRKRADILADLQERGY-ETFT----------KDDDNKSDGDESDEEDENVSDAELAKGYDYLLGMKIWSLTYEKAEQLRRELEEKKQAVKDLEATAPSAIWENDLDDI---LDALDEREIAMEAAEKEERKA 789          
BLAST of mRNA_M-pyrifera_M_contig66807.16177.1 vs. uniprot
Match: A0A7J7CQX4_TRIWF (DNA topoisomerase 2 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CQX4_TRIWF)

HSP 1 Score: 164 bits (415), Expect = 8.800e-44
Identity = 111/287 (38.68%), Postives = 157/287 (54.70%), Query Frame = 1
Query:    7 ISELPIRKWTSDYKAFLETLTPEAEKQLEKAKGKGKKAAMSGPLVKEIRENHTDTSVSFALRLTEQGRRLAENPAALRRRLKLSTTVSTTNMTLFDARGRIARYESATHILRAFFPLRRRYYSKRKEHMLSVLQEELRVLDGRVRFIRSVVDGELVVSRRSKSDIVAELHAKAFPEVLTASARAATSRKKRQSMALGGVESDDXXXXXXEIDGRG-----YNYLLSMPIYSLTKEKMLKLQEAAADK---RAEVMDLEEQTPESLWERDLDALEAELDAMDVERAAA 843
            ++ELP+R+WT DYK FL +++    K +              P + E RE+  DT+V F + L+ +   +A+    L++  KL+TT+ST+NM LFD  G I +Y++   IL  FFPLR  +Y KRK  +L  L+EEL  L+ RVRFI  VV GE++V+ R ++D+  EL  K F             + K   +A+ G   D        +  +G     Y+YLLSM I SLT EK+   QE  ADK     EV DL + TP+S+W +DLDALE EL+  D   A A
Sbjct:   44 VTELPVRRWTQDYKEFLVSVSEGNNKAI-------------NPFITEFREHSDDTTVDFKIILSNENMLMAKQEGLLKK-FKLTTTISTSNMHLFDPNGVIKKYDTPEQILEEFFPLRLEFYEKRKNILLDNLEEELLKLENRVRFILGVVSGEIIVNNRKRADLFLELQHKGFTPF--------PKKTKSIELAVAGATHDTEDTEDNVVLAKGVRASDYDYLLSMAIGSLTLEKV---QELCADKDKLNQEVDDLRKATPKSMWIKDLDALERELNEQDASDAVA 305          
BLAST of mRNA_M-pyrifera_M_contig66807.16177.1 vs. uniprot
Match: A0A1Z5J9F6_FISSO (DNA topoisomerase 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J9F6_FISSO)

HSP 1 Score: 169 bits (428), Expect = 1.360e-43
Identity = 114/298 (38.26%), Postives = 161/298 (54.03%), Query Frame = 1
Query:    1 VTISELPIRKWTSDYKAFLETLTPEAEKQLEKAKGKGKKAAMSGPLVKEIRENHTDTSVSFALRLTEQGR--RLAENPAALRRRLKLSTTVSTTNMTLFDARGRIARYESATHILRAFFPLRRRYYSKRKEHMLSVLQEELRVLDGRVRFIRSVVDGELVVSRRSKSDIVAELHAKAFPEVLTASARAATSRKKRQSMALGGVESDDXXXXXXEID--------GRGYNYLLSMPIYSLTKEKMLKLQEAAADKRAEVMDLEEQTPESLWERDLDALEAELDAMDVERAAALAQEARA 864
            + I+ELP++KWT DYK F+E L            G GK  A     +K+ RENHTDT+VSF + + E+    +       L  + KL+ ++ST NM LFD  G+I +YES   I+RAF P+R  YY KRKE+++S L+EE ++L  + RF+  V  G+LVVS R ++DI+  L A  +  VL  +A                   DD      E++         +GY YLL M I+SLT EK   L+   A+K  E+  L++  P  +W  DLDA+EA LD  D E + ALA E +A
Sbjct:  942 ILITELPVKKWTQDYKVFVEGLLT----------GDGKTPAE----IKDFRENHTDTTVSFTI-IAEKAMIDKWESEKGGLMNKFKLTASLSTNNMNLFDENGKITKYESPLSIMRAFVPIRLEYYEKRKENLVSKLEEERKILSNKARFVEEVCSGKLVVSNRKRNDILNNLKASGYDLVLKYAA-----------------PKDDEDSQDEEVEEESTVGELAKGYEYLLGMKIWSLTYEKAEALRAQLAEKTQELEILKKTAPAQIWSNDLDAIEAALDERDGEISKALATEKKA 1207          
BLAST of mRNA_M-pyrifera_M_contig66807.16177.1 vs. uniprot
Match: A0A7S2XMN6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMN6_9STRA)

HSP 1 Score: 168 bits (425), Expect = 2.560e-43
Identity = 112/288 (38.89%), Postives = 156/288 (54.17%), Query Frame = 1
Query:    7 ISELPIRKWTSDYKAFLETLTPEAEKQLEKAKGKGKKAAMSGPLVKEIRENHTDTSVSFALRLT-EQGRRLAENPAALRRRLKLSTTVSTTNMTLFDARGRIARYESATHILRAFFPLRRRYYSKRKEHMLSVLQEELRVLDGRVRFIRSVVDGELVVSRRSKSDIVAELHAKAFPEVLTASARAATSRKKRQSMALGGVESDDXXXXXXEID-GRGYNYLLSMPIYSLTKEKMLKLQEAAADKRAEVMDLEEQTPESLWERDLDALEAELDAMDVERAAALAQEARA 864
            ISELPIRKWT DYK FLE +     K  E               +K+  ENHTDT+VSF +  T E+     +    L  + KLSTT+ST+NM LFDA GRI +Y S   IL  F+ +R ++YSKRKE +L VL+ + + L  + RF+  V  G+LVVS R +SDI+++L  + + +VL          K ++  A    E ++      +    +GY YLL M I+SL+ EK  +L+    +K   V DLE   P  +W +DLDA+E  L+  D    AA   E RA
Sbjct:  373 ISELPIRKWTQDYKVFLEEMMTGGAKNAEGD-------------IKDFSENHTDTTVSFTIIATKEKIDSFEKEKKGLEGKFKLSTTISTSNMNLFDAEGRITKYNSPLEILETFYNMRLQFYSKRKELLLKVLRRDQKTLSNKARFVEEVCSGDLVVSNRKRSDILSDLQQRGY-DVL---------EKDKEKYASEDAEEEEIEETASDAQLAKGYEYLLGMKIWSLSYEKAQQLRAQLQEKTKAVEDLEATDPSEIWLKDLDAIEEALEQRDEAMEAACEDERRA 637          
BLAST of mRNA_M-pyrifera_M_contig66807.16177.1 vs. uniprot
Match: A0A6J1DIB5_MOMCH (DNA topoisomerase 2 n=2 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1DIB5_MOMCH)

HSP 1 Score: 167 bits (424), Expect = 4.660e-43
Identity = 111/276 (40.22%), Postives = 156/276 (56.52%), Query Frame = 1
Query:    7 ISELPIRKWTSDYKAFLETLTPEAEKQLEKAKGKGKKAAMSGPLVKEIRENHTDTSVSFALRLTEQGRRLAENPAALRRRLKLSTTVSTTNMTLFDARGRIARYESATHILRAFFPLRRRYYSKRKEHMLSVLQEELRVLDGRVRFIRSVVDGELVVSRRSKSDIVAELHAKAFPEVLTASARAATSRKKRQSMALGGVESDDXXXXXXEIDGR---GYNYLLSMPIYSLTKEKMLKLQEAAADKRAEVMDLEEQTPESLWERDLDALEAELDAMD 825
            I+ELP+R+WT+DYK FL+++T  A K         K+ A   P +++   +  D +VS  + LTE+   LA     L+++ KL+TTVST+NM LFD+ G I +Y++   IL  FFPLR  YY KRK ++L  L+ EL  L+ +VRFI +VV+GE+VVS R + D+  EL AK F              K  +    G     D      E  G     Y YLL++ I +LT EK+ +L     + + EV DL + TP+SLW +DLD LE ELD MD
Sbjct:  913 ITELPVRRWTNDYKEFLDSVTRVATKN-------DKEKAAKDPFIEQADHHSDDKTVSIDVHLTEENMILALQEG-LKKKFKLTTTVSTSNMHLFDSNGVIKKYDTPEQILEEFFPLRLEYYEKRKMNLLENLERELLQLENKVRFILAVVNGEIVVSNRRRVDLFHELQAKGFTPF-------PKKTKSVEPEVAGASNETDEAEESPEAKGERVSDYGYLLALAIGTLTIEKVQELCNDRDELKGEVEDLRKATPKSLWLKDLDTLEKELDEMD 1173          
BLAST of mRNA_M-pyrifera_M_contig66807.16177.1 vs. uniprot
Match: A0A4P9XR25_9FUNG (DNA topoisomerase 2 (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XR25_9FUNG)

HSP 1 Score: 167 bits (422), Expect = 7.590e-43
Identity = 106/266 (39.85%), Postives = 150/266 (56.39%), Query Frame = 1
Query:    1 VTISELPIRKWTSDYKAFLETLTPEAEKQLEKAKGKGKKAAMSGPLVKEIRENHTDTSVSFALRLTEQGRRLAENPAALRRRLKLSTTVSTTNMTLFDARGRIARYESATHILRAFFPLRRRYYSKRKEHMLSVLQEELRVLDGRVRFIRSVVDGELVVSRRSKSDIVAELHAKAFPEVLTASARAATSRKKRQSMALGGVESDDXXXXXXEIDGRGYNYLLSMPIYSLTKEKMLKLQEAAADKRAEVMDLEEQTPESLWERDLDA 798
            + I+ELPIR WT  YK  LE+     +K              +   +K+ +E HTDT+V F + LTE+  R AE    L +R K+STT+ST NM  FD+  RI RY S   ILR F+ LR  +Y +RKE + + L  E   LD RVRFI+ ++ G+LVV  R K+DI+AEL ++ +         AA  RK  ++ A G  + ++           GY+YLLSM I+SLT EK+ +L +  A+K +E+  L  +TP+ LW  DLDA
Sbjct:  719 IEITELPIRSWTQSYKEQLESWLTGTDK--------------TPAFIKDYKEYHTDTTVHFVITLTEENMRKAEEEG-LEKRFKISTTISTNNMVCFDSENRIKRYSSPIEILREFYDLRLNFYQRRKEWLSNQLTTEWTKLDNRVRFIQEIISGKLVVQNRKKADILAELRSRGY---------AAFPRKTDEAQA-GEEQEEEDAGDEKSNKNHGYDYLLSMAIWSLTHEKVQQLMKERAEKESELNVLLAKTPKDLWNADLDA 959          
BLAST of mRNA_M-pyrifera_M_contig66807.16177.1 vs. uniprot
Match: C1E5N4_MICCC (DNA topoisomerase 2 n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E5N4_MICCC)

HSP 1 Score: 166 bits (420), Expect = 1.580e-42
Identity = 109/294 (37.07%), Postives = 166/294 (56.46%), Query Frame = 1
Query:    1 VTISELPIRKWTSDYKAFLETLTPEAEKQLEKAKGKGKKAAMSGPLVKEIRENHTDTSVSFALRLTEQGRRLAENPAALRRRLKLSTTVSTTNMTLFDARGRIARYESATHILRAFFPLRRRYYSKRKEHMLSVLQEELRVLDGRVRFIRSVVDGELVVSRRSKSDIVAELHAKAFPEV-LTASARAATSRKKRQSMALGGVESDDXXXXXXEIDGRGYNYLLSMPIYSLTKEKMLKLQEAAADKRAEVMDLEEQTPESLWERDLDALEAELDAMDVERAAALAQEARARRAAA 879
            + I+ELP+R WT+DYK FLE +    EK  +             P + + +E+HTDT+V F + +T +    A+    + ++ KL   VST+NM  FD +G I +Y S   I+ AF PLR   Y++R+  ++   + EL+ +  +VRFI +VVDGE+ + R+ KS ++ EL A  + ++  TA A AA   +  +S    G+            DG  Y+YLLSMP+++LT+EK+ +L E    K AEV +L   T + LW RDLDA +A +D  D E A A  + A+ +RAAA
Sbjct:  935 LVITELPLRSWTTDYKDFLENMLSPKEKNAQ-------------PFITDYKEHHTDTTVHFIVTMTPENMAKAQKDG-IEKKFKLCAKVSTSNMHAFDEKGGITKYSSPEAIMEAFVPLRLDAYARRRAMLIRQAEFELKRMSNKVRFILAVVDGEMTIGRKKKSVLIEELEAAGYDKMPKTAKAAAAXDAEPAES----GLSDISEEGAPAPADGASYDYLLSMPLWNLTQEKVDELVEEQRVKTAEVEELHGTTDKQLWIRDLDAFDAAMDVFDAEDAKAAEELAKQQRAAA 1210          
BLAST of mRNA_M-pyrifera_M_contig66807.16177.1 vs. uniprot
Match: W7TC60_9STRA (DNA topoisomerase 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TC60_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.600e-42
Identity = 106/273 (38.83%), Postives = 156/273 (57.14%), Query Frame = 1
Query:    1 VTISELPIRKWTSDYKAFLETLTPEAEKQLEKAKGKGKKAAMSGPLVKEIRENHTDTSVSFALRLTEQGR-RLAENPAALRRRLKLSTTVSTTNMTLFDARGRIARYESATHILRAFFPLRRRYYSKRKEHMLSVLQEELRVLDGRVRFIRSVVDGELVVSRRSKSDIVAELHAKAFPEVLTASARAATSRKKRQSMALGGVESDDXXXXXXEIDGRGYNYLLSMPIYSLTKEKMLKLQEAAADKRAEVMDLEEQTPESLWERDLDALEAELD 816
            V ++ELP++KWT DYK FLE++T  A  +              G  +K+++E HTDTSV F + L+E     L  +  AL +RLKL ++++T+NM LFDA G I +YE+   +LR F+PLR   Y KR+  +L  L+ E R +D +VRFI SVVDG LVVS R K++++ EL                 +R+  +  A G    D+         G+GY+YLLSM ++SLT E++  L+   A K AE+  L   +   LW +D+DALE +L+
Sbjct:  924 VEVTELPVKKWTQDYKQFLESMTVGASDE-------------KGAFIKDLKERHTDTSVYFVITLSETAAPELLVDDQALFKRLKLESSITTSNMHLFDAEGHIVKYETPLAVLREFYPLRLSLYEKRRAALLQRLEREWRRMDNKVRFILSVVDGRLVVSNRKKAELLQEL-----------------AREGYELFAPGAGGYDEEEGEGGGELGKGYDYLLSMKLWSLTLERVEDLRGQLAQKAAELEALRGTSAADLWLQDMDALEQKLE 1166          
BLAST of mRNA_M-pyrifera_M_contig66807.16177.1 vs. uniprot
Match: A0A0D2X192_CAPO3 (DNA topoisomerase 2 n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2X192_CAPO3)

HSP 1 Score: 166 bits (419), Expect = 2.190e-42
Identity = 116/291 (39.86%), Postives = 164/291 (56.36%), Query Frame = 1
Query:    7 ISELPIRKWTSDYKAFLETLTPEAEKQLEKAKGKGKKAAMSGPLVKEIRENHTDTSVSFALRLTEQGRRLAENPAALRRRLKLSTTVSTTNMTLFDARGRIARYESATHILRAFFPLRRRYYSKRKEHMLSVLQEELRVLDGRVRFIRSVVDGELVVSRRSKSDIVAELHAKAFPEVLTASARAATSRKKRQSMALGGVESDDXXXXXXEIDG--------RGYNYLLSMPIYSLTKEKMLKLQEAAADKRAEVMDLEEQTPESLWERDLDALEAELDAMDVERAAALAQE 855
            I+ELPI  WT  YK  LE L    EK  +K  G           +K+ RENHTDTSV F + L+E+    AE    L ++ K+ +T+ST NM  FDA GRI +Y+S   ILR F+ LR +YY KRK  ++  L EE   LD +VRFI++V+ G+LV+S R ++D++ +L  + +          +TS KK +    G +++DD        D          GY+YLL+MP++SLT EK+ +L    + K  E+  L E++  +LW  DLDA EAEL  + VE  AAL QE
Sbjct:  928 ITELPIGVWTQSYKEELEKLMEPNEK--DKTPG----------FIKDFRENHTDTSVHFTVTLSEENMAAAE-AMGLAKKFKIDSTISTANMVFFDAEGRIKKYDSPQAILRDFYDLRLKYYQKRKSWLVERLTEEWTRLDNKVRFIQAVIKGDLVISNRKRADLMRDLKTRGYTAF-------STSTKKIK--IAGAIDADDNGGADETADNDSDDIVHTNGYDYLLTMPLWSLTLEKVQQLLGERSVKEEELKVLLEKSTLTLWSEDLDAFEAEL--IRVEEQAALDQE 1194          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66807.16177.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R1C6H3_EMIHU4.580e-4942.86DNA topoisomerase 2 n=2 Tax=Emiliania huxleyi TaxI... [more]
A0A7R9ZGL7_9STRA1.980e-4439.52Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7J7CQX4_TRIWF8.800e-4438.68DNA topoisomerase 2 n=1 Tax=Tripterygium wilfordii... [more]
A0A1Z5J9F6_FISSO1.360e-4338.26DNA topoisomerase 2 n=2 Tax=Fistulifera solaris Ta... [more]
A0A7S2XMN6_9STRA2.560e-4338.89Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6J1DIB5_MOMCH4.660e-4340.22DNA topoisomerase 2 n=2 Tax=Momordica charantia Ta... [more]
A0A4P9XR25_9FUNG7.590e-4339.85DNA topoisomerase 2 (Fragment) n=1 Tax=Thamnocepha... [more]
C1E5N4_MICCC1.580e-4237.07DNA topoisomerase 2 n=1 Tax=Micromonas commoda (st... [more]
W7TC60_9STRA1.600e-4238.83DNA topoisomerase 2 n=2 Tax=Monodopsidaceae TaxID=... [more]
A0A0D2X192_CAPO32.190e-4239.86DNA topoisomerase 2 n=1 Tax=Capsaspora owczarzaki ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66807contigM-pyrifera_M_contig66807:91..1230 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score188.7
Seed ortholog evalue3.8e-45
Seed eggNOG ortholog2903.EOD17812
KEGG koko:K03164
KEGG Pathwayko01524,map01524
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000075,GO:0000278,GO:0000280,GO:0000712,GO:0000819,GO:0003674,GO:0003824,GO:0003916,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006259,GO:0006310,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007093,GO:0007127,GO:0007131,GO:0007346,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0022402,GO:0022414,GO:0031570,GO:0034641,GO:0035825,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0044774,GO:0045132,GO:0045786,GO:0045930,GO:0046483,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051276,GO:0051304,GO:0051307,GO:0051321,GO:0051726,GO:0061982,GO:0065007,GO:0071704,GO:0071840,GO:0090304,GO:0098813,GO:0140013,GO:0140097,GO:1901360,GO:1903046,GO:1903047
EggNOG free text desc.DNA topoisomerase type II (ATP-hydrolyzing) activity
EggNOG OGsCOG0187@1,KOG0355@2759
EC5.99.1.3
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03036
Exons2
Model size894
Cds size894
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816558.3188262-CDS-M-pyrifera_M_contig66807:90..2111622816558.3188262-CDS-M-pyrifera_M_contig66807:90..211Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66807 91..211 +
1692278045.9307365-CDS-M-pyrifera_M_contig66807:90..2111692278045.9307365-CDS-M-pyrifera_M_contig66807:90..211Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66807 91..211 +
1622816558.334347-CDS-M-pyrifera_M_contig66807:457..12301622816558.334347-CDS-M-pyrifera_M_contig66807:457..1230Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66807 458..1230 +
1692278045.9416537-CDS-M-pyrifera_M_contig66807:457..12301692278045.9416537-CDS-M-pyrifera_M_contig66807:457..1230Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66807 458..1230 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66807.16177.1prot_M-pyrifera_M_contig66807.16177.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig66807 91..1230 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig66807.16177.1

>prot_M-pyrifera_M_contig66807.16177.1 ID=prot_M-pyrifera_M_contig66807.16177.1|Name=mRNA_M-pyrifera_M_contig66807.16177.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=298bp
VTISELPIRKWTSDYKAFLETLTPEAEKQLEKAKGKGKKAAMSGPLVKEI
RENHTDTSVSFALRLTEQGRRLAENPAALRRRLKLSTTVSTTNMTLFDAR
GRIARYESATHILRAFFPLRRRYYSKRKEHMLSVLQEELRVLDGRVRFIR
SVVDGELVVSRRSKSDIVAELHAKAFPEVLTASARAATSRKKRQSMALGG
VESDDEDDEDEEIDGRGYNYLLSMPIYSLTKEKMLKLQEAAADKRAEVMD
LEEQTPESLWERDLDALEAELDAMDVERAAALAQEARARRAAAGTIKG
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mRNA from alignment at M-pyrifera_M_contig66807:91..1230+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig66807.16177.1 ID=mRNA_M-pyrifera_M_contig66807.16177.1|Name=mRNA_M-pyrifera_M_contig66807.16177.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1140bp|location=Sequence derived from alignment at M-pyrifera_M_contig66807:91..1230+ (Macrocystis pyrifera P11B4 male)
GTCACCATTTCAGAACTTCCTATTCGCAAGTGGACATCAGACTACAAGGC TTTCCTTGAAACTCTCACTCCTGAAGCTGAGAAGCAACTCGAAAAGGCCA AGGGCAAAGGAAAGAAAGCGGGTGCAAAGAAAACCACTGCAGCGAAAGGA AAAGGGAAAGGAAAGAAGGCGGGGGCTGCGAAGGGAAAAGGCAAAGGGAA AGGGAAAAAGAAGGGAGATGATGAGGAGGATGGAGGTGAAGAGGATGATG AAGAGTTCAACCCTGATGAAGTGGATGATGAGGAAGATTATGATGATGAA GAAGAGGATGGTGGAAAGGGGAGGAAGAAAGGTGGCAAGAAGAAGAAGAA GGATGAGGAAGATGAAGCAATGTCTGGACCATTGGTGAAGGAAATTCGTG AAAACCACACTGATACATCTGTATCATTTGCATTGCGCTTGACAGAACAA GGGAGACGCTTGGCTGAAAACCCAGCAGCATTGCGTCGTCGTTTGAAGTT GTCAACCACAGTGTCCACAACGAACATGACCTTGTTTGATGCACGTGGTC GCATTGCTCGATACGAGTCTGCAACTCACATTCTGCGTGCATTCTTCCCT CTTCGTCGCCGCTACTACTCCAAGCGAAAAGAACACATGCTCTCGGTGTT GCAAGAAGAATTGCGGGTGTTGGATGGTCGCGTGCGTTTTATCCGCAGCG TTGTCGATGGAGAATTGGTGGTGTCTCGCCGATCCAAGAGTGACATTGTT GCTGAATTGCATGCCAAGGCCTTCCCAGAGGTGCTCACAGCAAGTGCACG TGCAGCAACATCTCGCAAGAAACGTCAGAGCATGGCATTGGGAGGTGTGG AGAGTGATGATGAGGATGATGAAGATGAAGAGATTGATGGACGTGGATAC AACTACCTCCTCTCTATGCCAATTTACTCTCTCACCAAGGAGAAGATGCT CAAGCTCCAAGAAGCAGCTGCAGACAAGCGTGCTGAAGTGATGGATTTGG AAGAACAAACCCCAGAATCCTTGTGGGAGCGTGATTTGGATGCTCTTGAA GCAGAATTGGATGCCATGGATGTGGAACGAGCAGCAGCATTAGCACAAGA AGCAAGAGCTCGACGAGCTGCAGCTGGCACCATCAAGGGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig66807:91..1230+

>mRNA_M-pyrifera_M_contig66807.16177.1 ID=mRNA_M-pyrifera_M_contig66807.16177.1|Name=mRNA_M-pyrifera_M_contig66807.16177.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1788bp|location=Sequence derived from alignment at M-pyrifera_M_contig66807:91..1230+ (Macrocystis pyrifera P11B4 male)
GTCACCATTTCAGAACTTCCTATTCGCAAGTGGACATCAGACTACAAGGC
TTTCCTTGAAACTCTCACTCCTGAAGCTGAGAAGCAACTCGAAAAGGCCA
AGGGCAAAGGAAAGAAAGCGGGTCACCATTTCAGAACTTCCTATTCGCAA
GTGGACATCAGACTACAAGGCTTTCCTTGAAACTCTCACTCCTGAAGCTG
AGAAGCAACTCGAAAAGGCCAAGGGCAAAGGAAAGAAAGCGGCAATGTCT
GGACCATTGGTGAAGGAAATTCGTGAAAACCACACTGATACATCTGTATC
ATTTGCATTGCGCTTGACAGAACAAGGGAGACGCTTGGCTGAAAACCCAG
CAGCATTGCGTCGTCGTTTGAAGTTGTCAACCACAGTGTCCACAACGAAC
ATGACCTTGTTTGATGCACGTGGTCGCATTGCTCGATACGAGTCTGCAAC
TCACATTCTGCGTGCATTCTTCCCTCTTCGTCGCCGCTACTACTCCAAGC
GAAAAGAACACATGCTCTCGGTGTTGCAAGAAGAATTGCGGGTGTTGGAT
GGTCGCGTGCGTTTTATCCGCAGCGTTGTCGATGGAGAATTGGTGGTGTC
TCGCCGATCCAAGAGTGACATTGTTGCTGAATTGCATGCCAAGGCCTTCC
CAGAGGTGCTCACAGCAAGTGCACGTGCAGCAACATCTCGCAAGAAACGT
CAGAGCATGGCATTGGGAGGTGTGGAGAGTGATGATGAGGATGATGAAGA
TGAAGAGATTGATGGACGTGGATACAACTACCTCCTCTCTATGCCAATTT
ACTCTCTCACCAAGGAGAAGATGCTCAAGCTCCAAGAAGCAGCTGCAGAC
AAGCGTGCTGAAGTGATGGATTTGGAAGAACAAACCCCAGAATCCTTGTG
GGAGCGTGATTTGGATGCTCTTGAAGCAGAATTGGATGCCATGGATGTGG
AACGAGCAGCAGCATTAGCACAAGAAGCAAGAGCTCGACGAGCTGCAGCT
GGCACCATCAAGGGACAATGTCTGGACCATTGGTGAAGGAAATTCGTGAA
AACCACACTGATACATCTGTATCATTTGCATTGCGCTTGACAGAACAAGG
GAGACGCTTGGCTGAAAACCCAGCAGCATTGCGTCGTCGTTTGAAGTTGT
CAACCACAGTGTCCACAACGAACATGACCTTGTTTGATGCACGTGGTCGC
ATTGCTCGATACGAGTCTGCAACTCACATTCTGCGTGCATTCTTCCCTCT
TCGTCGCCGCTACTACTCCAAGCGAAAAGAACACATGCTCTCGGTGTTGC
AAGAAGAATTGCGGGTGTTGGATGGTCGCGTGCGTTTTATCCGCAGCGTT
GTCGATGGAGAATTGGTGGTGTCTCGCCGATCCAAGAGTGACATTGTTGC
TGAATTGCATGCCAAGGCCTTCCCAGAGGTGCTCACAGCAAGTGCACGTG
CAGCAACATCTCGCAAGAAACGTCAGAGCATGGCATTGGGAGGTGTGGAG
AGTGATGATGAGGATGATGAAGATGAAGAGATTGATGGACGTGGATACAA
CTACCTCCTCTCTATGCCAATTTACTCTCTCACCAAGGAGAAGATGCTCA
AGCTCCAAGAAGCAGCTGCAGACAAGCGTGCTGAAGTGATGGATTTGGAA
GAACAAACCCCAGAATCCTTGTGGGAGCGTGATTTGGATGCTCTTGAAGC
AGAATTGGATGCCATGGATGTGGAACGAGCAGCAGCATTAGCACAAGAAG
CAAGAGCTCGACGAGCTGCAGCTGGCACCATCAAGGGA
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