mRNA_M-pyrifera_M_contig66801.16174.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig66801.16174.1
Unique NamemRNA_M-pyrifera_M_contig66801.16174.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig66801.16174.1 vs. uniprot
Match: A0A2K1QMR2_9PEZI (Mannosyltransferase n=1 Tax=Sphaceloma murrayae TaxID=2082308 RepID=A0A2K1QMR2_9PEZI)

HSP 1 Score: 55.1 bits (131), Expect = 6.940e-7
Identity = 34/79 (43.04%), Postives = 42/79 (53.16%), Query Frame = 1
Query:   37 ALVVGRLVFAHALGYIHPDEHFQGPEIAFGRR-GVASWVPWEF--ADPERLYRTSWL----PEVLTTWPWAFVGMVLRP 252
            ALV+ RL FA +  Y+HPDEHFQGPE+  G+     S + WEF  A P R     WL    P  +  W W  +G  L P
Sbjct:   16 ALVLLRLYFAVSPSYLHPDEHFQGPEVIAGQVFHTPSKLTWEFTSASPIRSIFPLWLIYGWPLTILKWIWDGLGFGLVP 94          
BLAST of mRNA_M-pyrifera_M_contig66801.16174.1 vs. uniprot
Match: A0A6A6C0Y9_9PEZI (Mannosyltransferase n=1 Tax=Zasmidium cellare ATCC 36951 TaxID=1080233 RepID=A0A6A6C0Y9_9PEZI)

HSP 1 Score: 54.7 bits (130), Expect = 9.480e-7
Identity = 33/73 (45.21%), Postives = 39/73 (53.42%), Query Frame = 1
Query:   40 LVVGRLVFAHALGYIHPDEHFQGPEIAFGRR-GVASWVPWEF--ADPERLYRTSWL----PEVLTTWPWAFVG 237
            LV+ RL FA +  YIHPDEHFQGPEI  G   G  S+  WEF  + P R     WL    P  +  W W  +G
Sbjct:    9 LVLVRLYFALSPSYIHPDEHFQGPEIIAGEVFGYPSYKTWEFTSSQPIRSIFPFWLIYGWPLTVLKWIWEGLG 81          
BLAST of mRNA_M-pyrifera_M_contig66801.16174.1 vs. uniprot
Match: A0A1X7S0Y3_ZYMTR (Mannosyltransferase n=2 Tax=Zymoseptoria TaxID=1047167 RepID=A0A1X7S0Y3_ZYMTR)

HSP 1 Score: 53.9 bits (128), Expect = 1.770e-6
Identity = 32/77 (41.56%), Postives = 40/77 (51.95%), Query Frame = 1
Query:   28 VFGALVVGRLVFAHALGYIHPDEHFQGPEIAFGRR-GVASWVPWEFAD--PERLYRTSWL----PEVLTTWPWAFVG 237
            ++ ALV+ RL FA +  YIHPDEHFQGPE+  G   G   +  WEF    P R     WL    P  +  W W  +G
Sbjct:    5 IYLALVLVRLYFALSPSYIHPDEHFQGPEVIAGEVFGYPIYKTWEFTSSHPIRSIFPFWLIYGWPLTVLKWLWEGLG 81          
BLAST of mRNA_M-pyrifera_M_contig66801.16174.1 vs. uniprot
Match: F9XHM8_ZYMTI (Glutamate--tRNA ligase n=4 Tax=Zymoseptoria tritici TaxID=1047171 RepID=F9XHM8_ZYMTI)

HSP 1 Score: 53.9 bits (128), Expect = 1.830e-6
Identity = 32/77 (41.56%), Postives = 40/77 (51.95%), Query Frame = 1
Query:   28 VFGALVVGRLVFAHALGYIHPDEHFQGPEIAFGRR-GVASWVPWEFAD--PERLYRTSWL----PEVLTTWPWAFVG 237
            ++ ALV+ RL FA +  YIHPDEHFQGPE+  G   G   +  WEF    P R     WL    P  +  W W  +G
Sbjct:    5 IYLALVLVRLYFALSPSYIHPDEHFQGPEVIAGEVFGYPIYKTWEFTSSHPIRSIFPFWLIYGWPLTVLKWLWEGLG 81          
BLAST of mRNA_M-pyrifera_M_contig66801.16174.1 vs. uniprot
Match: A0A1V8SPY8_9PEZI (Mannosyltransferase (Fragment) n=2 Tax=Rachicladosporium sp. CCFEE 5018 TaxID=1974281 RepID=A0A1V8SPY8_9PEZI)

HSP 1 Score: 53.1 bits (126), Expect = 1.920e-6
Identity = 36/80 (45.00%), Postives = 39/80 (48.75%), Query Frame = 1
Query:   19 LWLVFGALVVGRLVFAHALGYIHPDEHFQGPEIAFGRR-GVASWVPWEFADPE--RLYRTSWL----PEVLTTWPWAFVG 237
            LWL    LV+ RL FA    YIHPDEHFQGPE+  G   G  S   WEF      R Y   WL    P  L  W W  +G
Sbjct:    5 LWLF---LVLVRLYFAFQPSYIHPDEHFQGPEVITGLVFGRPSHQTWEFKSSNAIRSYFPLWLIYGAPLTLLKWIWEGLG 81          
BLAST of mRNA_M-pyrifera_M_contig66801.16174.1 vs. uniprot
Match: A0A2D3VD57_9PEZI (Mannosyltransferase n=1 Tax=Ramularia collo-cygni TaxID=112498 RepID=A0A2D3VD57_9PEZI)

HSP 1 Score: 53.5 bits (127), Expect = 2.420e-6
Identity = 32/73 (43.84%), Postives = 38/73 (52.05%), Query Frame = 1
Query:   40 LVVGRLVFAHALGYIHPDEHFQGPEIAFGRR-GVASWVPWEF--ADPERLYRTSWL----PEVLTTWPWAFVG 237
            LV+ RL FA +  YIHPDEHFQGPEI  G   G   +  WEF  + P R     WL    P  +  W W  +G
Sbjct:    9 LVLARLYFALSPSYIHPDEHFQGPEIIAGEVFGYPIYKTWEFTSSQPIRSIFPFWLIYGWPLTVLKWLWEGLG 81          
BLAST of mRNA_M-pyrifera_M_contig66801.16174.1 vs. uniprot
Match: A0A1V8SWS7_9PEZI (RFX-type winged-helix domain-containing protein n=1 Tax=Rachicladosporium antarcticum TaxID=1507870 RepID=A0A1V8SWS7_9PEZI)

HSP 1 Score: 53.5 bits (127), Expect = 2.530e-6
Identity = 34/79 (43.04%), Postives = 40/79 (50.63%), Query Frame = 1
Query:   19 LWLVFGALVVGRLVFAHALGYIHPDEHFQGPEIAFGRRGVASWVPWEF--ADPERLYRTSWL----PEVLTTWPWAFVG 237
            LWL    LV+ RL FA    YIHPDEHFQGPE+  G         WEF  ++P R +   WL    P  L  W W  +G
Sbjct:    5 LWLF---LVLVRLYFAFQPSYIHPDEHFQGPEVITGNHQT-----WEFKSSNPIRSFFPLWLIYGAPLTLLKWIWEGLG 75          
BLAST of mRNA_M-pyrifera_M_contig66801.16174.1 vs. uniprot
Match: A0A6A6PWW7_9PEZI (Mannosyltransferase n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PWW7_9PEZI)

HSP 1 Score: 53.1 bits (126), Expect = 3.310e-6
Identity = 32/77 (41.56%), Postives = 39/77 (50.65%), Query Frame = 1
Query:   28 VFGALVVGRLVFAHALGYIHPDEHFQGPEIAFGRR-GVASWVPWEFAD--PERLYRTSWL----PEVLTTWPWAFVG 237
            ++  LV  RL FA    YIHPDEHFQGPEI  G   G  ++  WEF+   P R     WL    P  +  W W  +G
Sbjct:    5 IYLLLVAVRLYFALQPSYIHPDEHFQGPEIISGEVFGWPTYQTWEFSSDHPTRSLFPLWLAYGFPLTILKWIWEGLG 81          
BLAST of mRNA_M-pyrifera_M_contig66801.16174.1 vs. uniprot
Match: A0A4S8XBA4_AURPU (Mannosyltransferase n=1 Tax=Aureobasidium pullulans TaxID=5580 RepID=A0A4S8XBA4_AURPU)

HSP 1 Score: 52.8 bits (125), Expect = 4.480e-6
Identity = 33/67 (49.25%), Postives = 36/67 (53.73%), Query Frame = 1
Query:   40 LVVGRLVFAHALGYIHPDEHFQGPEIAFGRR-GVASWVPWEFAD--PERLYRTSW----LPEVLTTW 219
            LVV RL  A +  YIHPDEHFQGPE+  GR  G AS + WEF    P R     W    LP  L  W
Sbjct:    9 LVVLRLYLALSPSYIHPDEHFQGPEVIAGRVFGYASHLTWEFTSDSPIRSVFPLWIFYGLPLTLLRW 75          
BLAST of mRNA_M-pyrifera_M_contig66801.16174.1 vs. uniprot
Match: A0A2P7ZDJ6_9PEZI (Mannosyltransferase n=2 Tax=Elsinoe australis TaxID=40998 RepID=A0A2P7ZDJ6_9PEZI)

HSP 1 Score: 52.8 bits (125), Expect = 4.510e-6
Identity = 33/74 (44.59%), Postives = 41/74 (55.41%), Query Frame = 1
Query:   37 ALVVGRLVFAHALGYIHPDEHFQGPEIAFGRRGVA-SWVPWEF--ADPERLYRTSWL----PEVLTTWPWAFVG 237
            ALV+ RL FA +  Y+HPDEHFQGPE+  G+   A S + WEF  A P R     WL    P  +  W W  +G
Sbjct:    8 ALVLLRLYFAVSPSYLHPDEHFQGPEVIAGQVFHAPSKLTWEFTSATPIRSIFPLWLIYGWPLTILKWIWDGLG 81          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66801.16174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2K1QMR2_9PEZI6.940e-743.04Mannosyltransferase n=1 Tax=Sphaceloma murrayae Ta... [more]
A0A6A6C0Y9_9PEZI9.480e-745.21Mannosyltransferase n=1 Tax=Zasmidium cellare ATCC... [more]
A0A1X7S0Y3_ZYMTR1.770e-641.56Mannosyltransferase n=2 Tax=Zymoseptoria TaxID=104... [more]
F9XHM8_ZYMTI1.830e-641.56Glutamate--tRNA ligase n=4 Tax=Zymoseptoria tritic... [more]
A0A1V8SPY8_9PEZI1.920e-645.00Mannosyltransferase (Fragment) n=2 Tax=Rachiclados... [more]
A0A2D3VD57_9PEZI2.420e-643.84Mannosyltransferase n=1 Tax=Ramularia collo-cygni ... [more]
A0A1V8SWS7_9PEZI2.530e-643.04RFX-type winged-helix domain-containing protein n=... [more]
A0A6A6PWW7_9PEZI3.310e-641.56Mannosyltransferase n=1 Tax=Neohortaea acidophila ... [more]
A0A4S8XBA4_AURPU4.480e-649.25Mannosyltransferase n=1 Tax=Aureobasidium pullulan... [more]
A0A2P7ZDJ6_9PEZI4.510e-644.59Mannosyltransferase n=2 Tax=Elsinoe australis TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66801contigM-pyrifera_M_contig66801:4..255 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Exons1
Model size252
Cds size252
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816558.195407-CDS-M-pyrifera_M_contig66801:3..2551622816558.195407-CDS-M-pyrifera_M_contig66801:3..255Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66801 4..255 -
1692278045.8883975-CDS-M-pyrifera_M_contig66801:3..2551692278045.8883975-CDS-M-pyrifera_M_contig66801:3..255Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66801 4..255 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66801.16174.1prot_M-pyrifera_M_contig66801.16174.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig66801 4..255 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig66801.16174.1

>prot_M-pyrifera_M_contig66801.16174.1 ID=prot_M-pyrifera_M_contig66801.16174.1|Name=mRNA_M-pyrifera_M_contig66801.16174.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=84bp
MEKTKWLWLVFGALVVGRLVFAHALGYIHPDEHFQGPEIAFGRRGVASWV
PWEFADPERLYRTSWLPEVLTTWPWAFVGMVLRP
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mRNA from alignment at M-pyrifera_M_contig66801:4..255-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig66801.16174.1 ID=mRNA_M-pyrifera_M_contig66801.16174.1|Name=mRNA_M-pyrifera_M_contig66801.16174.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=252bp|location=Sequence derived from alignment at M-pyrifera_M_contig66801:4..255- (Macrocystis pyrifera P11B4 male)
ATGGAGAAAACAAAGTGGCTATGGTTGGTGTTTGGGGCATTAGTGGTGGG TAGGTTGGTGTTCGCGCATGCGTTGGGATACATTCATCCTGATGAGCACT TTCAGGGGCCAGAAATTGCGTTTGGACGACGAGGAGTGGCATCATGGGTG CCTTGGGAATTTGCCGATCCAGAACGACTCTATCGGACATCATGGTTGCC TGAAGTGTTGACAACATGGCCATGGGCATTTGTGGGTATGGTTTTGCGGC CT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig66801:4..255-

>mRNA_M-pyrifera_M_contig66801.16174.1 ID=mRNA_M-pyrifera_M_contig66801.16174.1|Name=mRNA_M-pyrifera_M_contig66801.16174.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig66801:4..255- (Macrocystis pyrifera P11B4 male)
ATGGAGAAAACAAAGTGGCTATGGTTGGTGTTTGGGGCATTAGTGGTGGG
TAGGTTGGTGTTCGCGCATGCGTTGGGATACATTCATCCTGATGAGCACT
TTCAGGGGCCAGAAATTGCGTTTGGACGACGAGGAGTGGCATCATGGGTG
CCTTGGGAATTTGCCGATCCAGAACGACTCTATCGGACATCATGGTTGCC
TGAAGTGTTGACAACATGGCCATGGGCATTTGTGGGTATGGTTTTGCGGC
CTATGGAGAAAACAAAGTGGCTATGGTTGGTGTTTGGGGCATTAGTGGTG
GGTAGGTTGGTGTTCGCGCATGCGTTGGGATACATTCATCCTGATGAGCA
CTTTCAGGGGCCAGAAATTGCGTTTGGACGACGAGGAGTGGCATCATGGG
TGCCTTGGGAATTTGCCGATCCAGAACGACTCTATCGGACATCATGGTTG
CCTGAAGTGTTGACAACATGGCCATGGGCATTTGTGGGTATGGTTTTGCG
GCCT
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