mRNA_M-pyrifera_M_contig66631.16151.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig66631.16151.1
Unique NamemRNA_M-pyrifera_M_contig66631.16151.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig66631.16151.1 vs. uniprot
Match: K3W6J2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6J2_GLOUD)

HSP 1 Score: 124 bits (311), Expect = 7.370e-30
Identity = 90/249 (36.14%), Postives = 128/249 (51.41%), Query Frame = 1
Query:    4 GKAVVLMSNQGGIALGRSGREEVCKVMETVCEALGVPCLVLVAPQYNVARKPGLGMWIALEAI--AKQDSVKIDKKASFFAGDADGSGSGGARSK----SDLEFAAGIRVPF-IPASLLHSRGQHTTIPPSPPPLPITPGLRALAGLVTYRVPFLPLTPQTPTLTPPATPELVVLVGPPGAGKSFFCRLMLPTHTVVNQDTEGSLEKCMLKAKQVLDRKGSVVVDATNRDTPTRSAWVALGRTYHPPVR 729
            G  +VL SNQ GIA G    +EV K +ET+   L +P L L+A Q ++ RKP LG W  +  I   K  + ++D   SF+ GDA G      R+K    +D +FA  I V F  P  L     Q          +   P       L  +++    L P T  +T P   E++VLVG P +GKSFF +    ++T+VNQD  G+L  C  K  + L RK SV+VD+TNRD   RS W+++ +  + P+R
Sbjct:   72 GFEIVLFSNQNGIAKGNVTAKEVKKKVETIVTKLNLPVLALLATQNDLMRKPRLGGWQEMLKILGVKSPNQQVDMTESFYCGDAAGRPKITGRNKDFAVTDYKFALNIGVKFHTPEDLFLKSKQRIHTHTDMWEIGFDP-----RSLCDFKLGL--LDPPTTEMTKPDQ-EIIVLVGSPASGKSFFSKTHFSSYTIVNQDELGTLTNCKKKCMEALARKKSVLVDSTNRDQRARSEWISIAKQQNLPIR 312          
BLAST of mRNA_M-pyrifera_M_contig66631.16151.1 vs. uniprot
Match: A0A0P1AFS0_PLAHL (Polynucleotide kinase 3' phosphatase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFS0_PLAHL)

HSP 1 Score: 125 bits (313), Expect = 1.960e-29
Identity = 87/250 (34.80%), Postives = 130/250 (52.00%), Query Frame = 1
Query:    1 DGKAVVLMSNQGGIALGRSGREEVCKVMETVCEALGVPCLVLVAPQYNVARKPGLGMWIAL-EAIAKQDSVKIDKKASFFAGDADGSGSGGARSK----SDLEFA--AGIRVPFIPASLLHSRGQHTTIPPSPPPLPITPGLRALAGLVTYRVPFLPLTPQTPTLTPPATPELVVLVGPPGAGKSFFCRLMLPTHTVVNQDTEGSLEKCMLKAKQVLDRKGSVVVDATNRDTPTRSAWVALGRTYHPPVR 729
            DG  +++ SNQ G+A G     EV + +ET+   L +P L  +  + ++ RKP LG W+ + + +  +  + +DKK SF+ GDA G      R+K    +D +FA  AGIR  F P +L  +  Q     P    L   P   A +    Y V F P + Q          E++VLVGP  +GKSFF +  L T+  V+QD   S+  C  K  + L++K SVV+D TNRD  TR  W+A+ +  + P+R
Sbjct:  208 DGYTLIIFSNQNGVAKGHVSAAEVQRKLETIIRQLKLPMLAFLGTKNDIMRKPRLGAWMEMIKLLNAKGEISVDKKMSFYCGDAAGRPKVSGRAKDFAATDYKFALNAGIRF-FTPEALFLASKQRIHTNPDTWELGFDPKSIAKSD---YPV-FSPSSAQVAK----RDQEIIVLVGPQASGKSFFAKQYLDTYVAVSQDELRSVANCKTKCLEALEKKNSVVIDNTNRDPWTRKEWIAIAQKKNIPIR 448          
BLAST of mRNA_M-pyrifera_M_contig66631.16151.1 vs. uniprot
Match: D0NY37_PHYIT (Bifunctional polynucleotide phosphatase/kinase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NY37_PHYIT)

HSP 1 Score: 121 bits (304), Expect = 1.390e-28
Identity = 91/253 (35.97%), Postives = 126/253 (49.80%), Query Frame = 1
Query:    1 DGKAVVLMSNQGGIALGRSGREEVCKVMETVCEALGVPCLVLVAPQYNVARKPGLGMWIALEAIAKQDSVK----IDKKASFFAGDADGSGSGGARSK----SDLEFA--AGIRVPFIPASLLHSRGQHTTIPPSPPPLPITPGLRALAGLVTYRVPFLPLTPQTPTLTPPATPELVVLVGPPGAGKSFFCRLMLPTHTVVNQDTEGSLEKCMLKAKQVLDRKGSVVVDATNRDTPTRSAWVALGRTYHPPVR 729
            DG  + + SNQ GIA G     +V   +E + + L +P LV +  + +  RKP LG W   E + K  S+K    +DK+ASF+ GDA G      R+K    +D +FA  AGIR  F P  L     Q     P    L   P   AL           PL   +      A  ELVVLVGPP +GKSFF ++ L ++ VV+QD   +  KC  K  + ++ K SVV+D TNRD  +R  W+A+ +    P+R
Sbjct:  115 DGFTLTIFSNQNGIAKGHISAAQVQSKLEAIVKQLKLPMLVFLGTENDFMRKPRLGAW---EEMTKLLSIKGEEAVDKEASFYCGDAAGRPKITGRAKDFAATDYKFALNAGIRF-FTPEDLFLGTKQRIHTRPDTWELGFDPKSIALHDSSE------PLLSSSSAQAARADQELVVLVGPPASGKSFFAKIYLSSYVVVSQDELRTAAKCKKKCLEAIEHKESVVIDNTNRDPRSRKEWIAIAKEKSLPIR 357          
BLAST of mRNA_M-pyrifera_M_contig66631.16151.1 vs. uniprot
Match: A0A5D6XWJ6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWJ6_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.440e-28
Identity = 89/254 (35.04%), Postives = 129/254 (50.79%), Query Frame = 1
Query:    4 GKAVVLMSNQGGIALGRSGREEVCKVMETVCEALGVPCLVLVAPQYNVARKPGLGMWIALEAIAKQDSVKIDKKASFFAGDADGSGSGGARSK----SDLEFAAGIRVPF-IPASLLHSRGQ--HTTIPP-----SPPPLPITPGLRALAGLVTYRVPFLPLTPQTPTLTPPATPELVVLVGPPGAGKSFFCRLMLPTHTVVNQDTEGSLEKCMLKAKQVLDRKGSVVVDATNRDTPTRSAWVALGRTYHPPVR 729
            G  +V+ SNQ GIA G     E+   +E + ++L +P LV++A + +  RKP LG W  +  +   D+  +D  ASF+ GDA G      R+K    +D +FA  +++ F  P +L  +  Q  HT +        P PL +     A A           L P T  L    T E+VVLVGPP +GKSFF +   P + V+NQD   +L  C       L ++ SVV+D+TNRDT +R  W+ L R  + PVR
Sbjct:  257 GFELVVFSNQNGIAAGHVTVTELQAKVEAIVKSLNLPVLVILATRSDRMRKPRLGGWHEMLQVLGLDAAGVDMDASFYCGDAAGRPKIAGRAKDFAATDYKFALNLKLQFHTPEALFLASTQRVHTHLDMWEIGFDPRPLALNNSFAATAAW---------LAPPTAELAK-TTQEVVVLVGPPASGKSFFSKTRFPGYVVINQDELRTLANCKKHCLDALAQQKSVVIDSTNRDTRSRGEWMVLAREQNVPVR 500          
BLAST of mRNA_M-pyrifera_M_contig66631.16151.1 vs. uniprot
Match: A0A3M6VLU0_9STRA (BRCT domain-containing protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VLU0_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.100e-27
Identity = 91/250 (36.40%), Postives = 124/250 (49.60%), Query Frame = 1
Query:    1 DGKAVVLMSNQGGIALGRSGREEVCKVMETVCEALGVPCLVLVAPQYNVARKPGLGMWIAL-EAIAKQDSVKIDKKASFFAGDADGSGSGGARSK----SDLEFA--AGIRVPFIPASLLHSRGQHTTIPPSPPPLPITPGLRALAGLVTYRVPFLPLTPQTPTLTPPATPELVVLVGPPGAGKSFFCRLMLPTHTVVNQDTEGSLEKCMLKAKQVLDRKGSVVVDATNRDTPTRSAWVALGRTYHPPVR 729
            DG  + + SNQ G+A G     +V   +ET+ + L +P LV +A + +V RKP LG W  L   ++ +    IDK+ASF+ GDA G      RSK    SD +FA  AGIR  F P +L  +  Q     P    L   P   AL           PL             E+VVLVGPP +GKSFF    L ++ +V+QD   +   C  +  + + +K SVVVD TNRD   R  WVAL +  + P+R
Sbjct:  215 DGYTLTIFSNQNGVAKGHITAAQVQNKLETIVKQLNLPMLVFLATENDVMRKPRLGAWKELANVLSTKGEEAIDKEASFYCGDAAGRPKIAGRSKDFAASDYKFALNAGIRF-FTPEALFLNTKQRIHTRPDSWELGFDPKSIALNESAE------PLLKPASAQIVKEEQEVVVLVGPPASGKSFFANTYLSSYVLVSQDELRTAATCKKEFVEAIAQKKSVVVDNTNRDPRARKEWVALAKEKNLPIR 457          
BLAST of mRNA_M-pyrifera_M_contig66631.16151.1 vs. uniprot
Match: A0A0W8DKD9_PHYNI (BRCT domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DKD9_PHYNI)

HSP 1 Score: 120 bits (300), Expect = 1.380e-27
Identity = 84/250 (33.60%), Postives = 128/250 (51.20%), Query Frame = 1
Query:    1 DGKAVVLMSNQGGIALGRSGREEVCKVMETVCEALGVPCLVLVAPQYNVARKPGLGMWIAL-EAIAKQDSVKIDKKASFFAGDADGSGSGGARSK----SDLEFA--AGIRVPFIPASLLHSRGQHTTIPPSPPPLPITPGLRALAGLVTYRVPFLPLTPQTPTLTPPATPELVVLVGPPGAGKSFFCRLMLPTHTVVNQDTEGSLEKCMLKAKQVLDRKGSVVVDATNRDTPTRSAWVALGRTYHPPVR 729
            DG  + + SNQ GIA G     +V   +ET+ + L +P LV +  + ++ RKP LG W  + + ++ +    IDKKASF+ GDA G      R+K    +D +FA  AGI   F P  L     Q     P        PG    +  + +     PL   +      +  E+VVLVGPP +GKSFF +  L ++ VV+QD + +   C  K  + +++K SVV+D TNRD  +R  W+A+ +  + P+R
Sbjct:  219 DGFTLTIFSNQNGIAKGHITAAQVQSKLETIVKQLKLPMLVFLGTENDIMRKPRLGAWKEMTKMLSDKGEEPIDKKASFYCGDAAGRPKITGRAKDFAATDYKFALNAGILF-FTPEDLFLGTKQRIHTRPDT----WEPGFDPKS--IVFNDSTEPLLSPSSAQAAKSEQEMVVLVGPPASGKSFFSKTYLSSYVVVSQDEQRTAANCKKKCLEAIEKKNSVVIDNTNRDPRSRKEWIAIAKEKNLPIR 461          
BLAST of mRNA_M-pyrifera_M_contig66631.16151.1 vs. uniprot
Match: A0A329T4F8_9STRA (BRCT domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T4F8_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.610e-27
Identity = 85/250 (34.00%), Postives = 125/250 (50.00%), Query Frame = 1
Query:    1 DGKAVVLMSNQGGIALGRSGREEVCKVMETVCEALGVPCLVLVAPQYNVARKPGLGMWIAL-EAIAKQDSVKIDKKASFFAGDADGSGSGGARSK----SDLEFA--AGIRVPFIPASLLHSRGQHTTIPPSPPPLPITPGLRALAGLVTYRVPFLPLTPQTPTLTPPATPELVVLVGPPGAGKSFFCRLMLPTHTVVNQDTEGSLEKCMLKAKQVLDRKGSVVVDATNRDTPTRSAWVALGRTYHPPVR 729
            DG  + + SNQ GIA G     +V   +E + + L +P LV +  + ++ RKP LG W  + + ++ +    IDK+ASF+ GDA G      R+K    +D +FA  AGIR  F P  L     Q     P    L   P   AL           PL   +      +  EL+VLVGPP +GKSFF +  L ++ VV+QD   +   C  K  + +++K SV +D TNRD   R  W+A+G+  + P+R
Sbjct:  219 DGFTLTIFSNQNGIAKGHITAAQVQSKLEAIVKQLKLPMLVFLGTENDIMRKPRLGAWKEMVKLLSAKGEEAIDKEASFYCGDAAGRPKITGRAKDFAATDYKFALNAGIRF-FTPEDLFLGTKQRIHTRPDTWELGFDPKSIALNDSTE------PLLSPSSAEAAKSDQELIVLVGPPASGKSFFAKTYLSSYVVVSQDELRTAANCKKKCLEAIEQKKSVTIDNTNRDPRARKEWIAIGKEKNLPIR 461          
BLAST of mRNA_M-pyrifera_M_contig66631.16151.1 vs. uniprot
Match: H3GMS2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GMS2_PHYRM)

HSP 1 Score: 120 bits (300), Expect = 2.910e-27
Identity = 87/250 (34.80%), Postives = 126/250 (50.40%), Query Frame = 1
Query:    1 DGKAVVLMSNQGGIALGRSGREEVCKVMETVCEALGVPCLVLVAPQYNVARKPGLGMWIALEAIAKQDS-VKIDKKASFFAGDADGSGSGGARSK----SDLEFA--AGIRVPFIPASLLHSRGQHTTIPPSPPPLPITPGLRALAGLVTYRVPFLPLTPQTPTLTPPATPELVVLVGPPGAGKSFFCRLMLPTHTVVNQDTEGSLEKCMLKAKQVLDRKGSVVVDATNRDTPTRSAWVALGRTYHPPVR 729
            DG  + + SNQ G+A G +   +V   +E + +AL +P LV +  + +  RKP LG W  +  +   DS   +DK+ASF+ GDA G      RSK    +D +FA  AGIR  F P  L     Q     P    L   P    ++           L+P +  +T P   E+VVLVG P +GKSFF +  L ++ +V+QD   +   C  K  + + R+ SVVVD TNRD   R  W+A+ +  + PVR
Sbjct:  214 DGFTLTIFSNQNGVAKGHATAAQVQSKLEAIVKALNLPMLVFLGTENDAMRKPRLGAWDEMTKLLAADSQAVVDKEASFYCGDAAGRPKVAGRSKDFAATDYKFALNAGIRF-FTPEDLFLGSKQRIHTRPDTWELGFDPKSIVISASAEPL-----LSPVSAQVTKPEQ-EIVVLVGSPASGKSFFAKTYLSSYVLVSQDELRTAANCKKKGLEAIAREKSVVVDNTNRDPRARKEWIAIAQEKNLPVR 456          
BLAST of mRNA_M-pyrifera_M_contig66631.16151.1 vs. uniprot
Match: G4YF34_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YF34_PHYSP)

HSP 1 Score: 117 bits (293), Expect = 5.500e-27
Identity = 90/252 (35.71%), Postives = 125/252 (49.60%), Query Frame = 1
Query:    1 DGKAVVLMSNQGGIALGRSGREEVCKVMETVCEALGVPCLVLVAPQYNVARKPGLGMWIAL-EAIAKQDSVKIDKKASFFAGDADGSGSGGARSK----SDLEFA--AGIRVPFIPASLLHSRGQHTTIPPSPPPLPITPGLRALAGLVTYRVPFLPLTPQTPTLTPPATP--ELVVLVGPPGAGKSFFCRLMLPTHTVVNQDTEGSLEKCMLKAKQVLDRKGSVVVDATNRDTPTRSAWVALGRTYHPPVR 729
            DG  +V+ SNQ GIA G     +V   +ET+ + L +P LVL+  + +  RKP LG W  +   ++ +    IDK+ASF+ GDA G      R+K    +D +FA  AGIR  F P  L     Q     P    L   P   AL        P L     +P     A P  E+VVLVGPP +GKSFF +  L ++TVV+ D   +   C  K  + +  K SVVVD TNR+   R  W+ + +  + P+R
Sbjct:  122 DGFTLVIFSNQNGIAKGHITAAQVQSKLETIVKQLKLPMLVLLGTENDAMRKPRLGAWKEMVNVVSSKGEEAIDKEASFYCGDAAGRPKIAGRAKDFAATDYKFALNAGIRF-FTPEDLFLGTKQRLHTRPDTWELGFDPKSVALNDSAE---PLL-----SPASAQAAKPDQEMVVLVGPPASGKSFFAKTYLSSYTVVSLDELRTAANCKKKCLEAIAEKKSVVVDNTNREPRARKEWITIAKEKNLPIR 364          
BLAST of mRNA_M-pyrifera_M_contig66631.16151.1 vs. uniprot
Match: A0A2P4WVN8_9STRA (Polynucleotide Kinase 3'-phosphatase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WVN8_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.630e-26
Identity = 86/257 (33.46%), Postives = 126/257 (49.03%), Query Frame = 1
Query:    1 DGKAVVLMSNQGGIALGRSGREEVCKVMETVCEALGVPCLVLVAPQYNVARKPGLGMWIAL-EAIAKQDSVKIDKKASFFAGDADGSGSGGARSK----SDLEFA--AGIRVPFIPASL-------LHSRGQHTTIPPSPPPLPITPGLRALAGLVTYRVPFLPLTPQTPTLTPPATPELVVLVGPPGAGKSFFCRLMLPTHTVVNQDTEGSLEKCMLKAKQVLDRKGSVVVDATNRDTPTRSAWVALGRTYHPPVR 729
            DG  + + SNQ GIA G     +V   +E + + L +P LV +  + +V RKP LG W  + + +  +    +DK+ASF+ GDA G      R+K    +D +FA  AGIR  F P  L       +H+R     +   P  + +      L            L+P +     P   EL+VLVGPP +GKSFF +  L T+ VV+QD   +   C  K  + + +K SVV+D TNRD   R  W+A+ +    PVR
Sbjct:  132 DGFTLTIFSNQNGIAKGHITATQVQSKLEAIVKQLNLPMLVFLGTENDVMRKPRLGAWKEMIKVLGDKGEEAVDKEASFYCGDAAGRPKIAGRAKDFAATDYKFALNAGIRF-FTPEDLFLGTKQRVHTRTDTWELGFDPKSIALNDSTEPL------------LSPVSAQAAKPDQ-ELIVLVGPPASGKSFFAKTYLSTYVVVSQDELRTTANCKKKCIEAIGQKKSVVIDNTNRDPRARKEWIAIAKEKDLPVR 374          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66631.16151.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
K3W6J2_GLOUD7.370e-3036.14Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A0P1AFS0_PLAHL1.960e-2934.80Polynucleotide kinase 3' phosphatase n=1 Tax=Plasm... [more]
D0NY37_PHYIT1.390e-2835.97Bifunctional polynucleotide phosphatase/kinase, pu... [more]
A0A5D6XWJ6_9STRA3.440e-2835.04Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A3M6VLU0_9STRA1.100e-2736.40BRCT domain-containing protein n=2 Tax=Peronospora... [more]
A0A0W8DKD9_PHYNI1.380e-2733.60BRCT domain-containing protein n=8 Tax=Phytophthor... [more]
A0A329T4F8_9STRA2.610e-2734.00BRCT domain-containing protein n=1 Tax=Phytophthor... [more]
H3GMS2_PHYRM2.910e-2734.80Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
G4YF34_PHYSP5.500e-2735.71Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A2P4WVN8_9STRA1.630e-2633.46Polynucleotide Kinase 3'-phosphatase n=1 Tax=Phyto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66631contigM-pyrifera_M_contig66631:72..806 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score123.2
Seed ortholog evalue1.6e-25
Seed eggNOG ortholog65071.PYU1_T000583
KEGG koko:K08073
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Bifunctional polynucleotide phosphatase kinase. Source PGD
EggNOG OGs1MFTQ@121069,COG0241@1,KOG2134@2759
EC2.7.1.78,3.1.3.32
COG Functional cat.L
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01009,ko03400
Exons1
Model size735
Cds size714
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816556.72166-UTR-M-pyrifera_M_contig66631:71..921622816556.72166-UTR-M-pyrifera_M_contig66631:71..92Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig66631 72..92 +
1692278044.9868388-UTR-M-pyrifera_M_contig66631:71..921692278044.9868388-UTR-M-pyrifera_M_contig66631:71..92Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig66631 72..92 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816556.7333388-CDS-M-pyrifera_M_contig66631:92..8061622816556.7333388-CDS-M-pyrifera_M_contig66631:92..806Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66631 93..806 +
1692278044.9993997-CDS-M-pyrifera_M_contig66631:92..8061692278044.9993997-CDS-M-pyrifera_M_contig66631:92..806Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66631 93..806 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66631.16151.1prot_M-pyrifera_M_contig66631.16151.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig66631 93..806 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig66631.16151.1

>prot_M-pyrifera_M_contig66631.16151.1 ID=prot_M-pyrifera_M_contig66631.16151.1|Name=mRNA_M-pyrifera_M_contig66631.16151.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=238bp
MSNQGGIALGRSGREEVCKVMETVCEALGVPCLVLVAPQYNVARKPGLGM
WIALEAIAKQDSVKIDKKASFFAGDADGSGSGGARSKSDLEFAAGIRVPF
IPASLLHSRGQHTTIPPSPPPLPITPGLRALAGLVTYRVPFLPLTPQTPT
LTPPATPELVVLVGPPGAGKSFFCRLMLPTHTVVNQDTEGSLEKCMLKAK
QVLDRKGSVVVDATNRDTPTRSAWVALGRTYHPPVRVI
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mRNA from alignment at M-pyrifera_M_contig66631:72..806+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig66631.16151.1 ID=mRNA_M-pyrifera_M_contig66631.16151.1|Name=mRNA_M-pyrifera_M_contig66631.16151.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=735bp|location=Sequence derived from alignment at M-pyrifera_M_contig66631:72..806+ (Macrocystis pyrifera P11B4 male)
GATGGGAAGGCTGTGGTATTGATGTCGAATCAGGGTGGAATTGCACTAGG GCGATCAGGGAGAGAGGAGGTGTGTAAGGTAATGGAAACAGTGTGTGAAG CATTAGGCGTTCCTTGTTTGGTTCTTGTTGCTCCACAGTATAATGTAGCT CGTAAACCGGGGTTGGGAATGTGGATTGCATTGGAGGCGATTGCAAAACA AGATAGTGTGAAAATCGACAAGAAGGCGAGCTTCTTCGCGGGGGATGCAG ATGGGTCTGGGAGTGGAGGAGCTCGATCAAAAAGCGACTTGGAGTTTGCT GCTGGAATTCGAGTCCCGTTCATCCCAGCCTCTCTCTTGCACTCCCGTGG ACAGCACACCACAATCCCACCAAGTCCACCTCCGCTCCCAATCACACCAG GGTTACGTGCACTTGCAGGGTTGGTGACATATCGCGTCCCATTCCTGCCA CTCACTCCCCAAACGCCTACCCTTACACCACCAGCGACTCCAGAACTCGT GGTGTTAGTTGGTCCTCCAGGAGCAGGAAAGTCCTTTTTTTGTCGCTTAA TGTTACCAACGCACACTGTAGTGAACCAAGATACGGAAGGAAGCTTGGAA AAGTGTATGCTTAAAGCAAAACAAGTGCTGGATAGGAAAGGCAGTGTTGT GGTGGATGCAACCAATCGGGACACTCCAACCAGATCTGCATGGGTTGCAT TGGGACGAACTTATCATCCACCTGTCCGTGTGATT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig66631:72..806+

>mRNA_M-pyrifera_M_contig66631.16151.1 ID=mRNA_M-pyrifera_M_contig66631.16151.1|Name=mRNA_M-pyrifera_M_contig66631.16151.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1428bp|location=Sequence derived from alignment at M-pyrifera_M_contig66631:72..806+ (Macrocystis pyrifera P11B4 male)
ATGTCGAATCAGGGTGGAATTGCACTAGGGCGATCAGGGAGAGAGGAGGT
GTGTAAGGTAATGGAAACAGTGTGTGAAGCATTAGGCGTTCCTTGTTTGG
TTCTTGTTGCTCCACAGTATAATGTAGCTCGTAAACCGGGGTTGGGAATG
TGGATTGCATTGGAGGCGATTGCAAAACAAGATAGTGTGAAAATCGACAA
GAAGGCGAGCTTCTTCGCGGGGGATGCAGATGGGTCTGGGAGTGGAGGAG
CTCGATCAAAAAGCGACTTGGAGTTTGCTGCTGGAATTCGAGTCCCGTTC
ATCCCAGCCTCTCTCTTGCACTCCCGTGGACAGCACACCACAATCCCACC
AAGTCCACCTCCGCTCCCAATCACACCAGGGTTACGTGCACTTGCAGGGT
TGGTGACATATCGCGTCCCATTCCTGCCACTCACTCCCCAAACGCCTACC
CTTACACCACCAGCGACTCCAGAACTCGTGGTGTTAGTTGGTCCTCCAGG
AGCAGGAAAGTCCTTTTTTTGTCGCTTAATGTTACCAACGCACACTGTAG
TGAACCAAGATACGGAAGGAAGCTTGGAAAAGTGTATGCTTAAAGCAAAA
CAAGTGCTGGATAGGAAAGGCAGTGTTGTGGTGGATGCAACCAATCGGGA
CACTCCAACCAGATCTGCATGGGTTGCATTGGGACGAACTTATCATCCAC
CTGTCCGTGTGATTATGTCGAATCAGGGTGGAATTGCACTAGGGCGATCA
GGGAGAGAGGAGGTGTGTAAGGTAATGGAAACAGTGTGTGAAGCATTAGG
CGTTCCTTGTTTGGTTCTTGTTGCTCCACAGTATAATGTAGCTCGTAAAC
CGGGGTTGGGAATGTGGATTGCATTGGAGGCGATTGCAAAACAAGATAGT
GTGAAAATCGACAAGAAGGCGAGCTTCTTCGCGGGGGATGCAGATGGGTC
TGGGAGTGGAGGAGCTCGATCAAAAAGCGACTTGGAGTTTGCTGCTGGAA
TTCGAGTCCCGTTCATCCCAGCCTCTCTCTTGCACTCCCGTGGACAGCAC
ACCACAATCCCACCAAGTCCACCTCCGCTCCCAATCACACCAGGGTTACG
TGCACTTGCAGGGTTGGTGACATATCGCGTCCCATTCCTGCCACTCACTC
CCCAAACGCCTACCCTTACACCACCAGCGACTCCAGAACTCGTGGTGTTA
GTTGGTCCTCCAGGAGCAGGAAAGTCCTTTTTTTGTCGCTTAATGTTACC
AACGCACACTGTAGTGAACCAAGATACGGAAGGAAGCTTGGAAAAGTGTA
TGCTTAAAGCAAAACAAGTGCTGGATAGGAAAGGCAGTGTTGTGGTGGAT
GCAACCAATCGGGACACTCCAACCAGATCTGCATGGGTTGCATTGGGACG
AACTTATCATCCACCTGTCCGTGTGATT
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