mRNA_M-pyrifera_M_contig66581.16143.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig66581.16143.1
Unique NamemRNA_M-pyrifera_M_contig66581.16143.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig66581.16143.1 vs. uniprot
Match: A0A836CML8_9STRA (Phenylalanine--tRNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML8_9STRA)

HSP 1 Score: 305 bits (781), Expect = 1.420e-99
Identity = 154/249 (61.85%), Postives = 185/249 (74.30%), Query Frame = 1
Query:    1 THSPVFHQLEGVRVFGPEEVGHLGEQA-REEYVVTHLKGGLEAMVRKMFGADAKLRWVDESFPFTDPSFELEVEFQGEWLEVLGCGVIARGVLDNAGIDKDTVGWAFGLGLERLAMRLFDIPDIRLFWSTDPRFLSQFQGAGTDVTFKPYSKFPPCYKDVAFWIPQNDA-----FHLHDVFETIRNVAGDLVEDVACIDEFTHPKTGRTSHCYRINYRSMDRSLTNQEVDALQEEVREHLQTKLNLELR 729
            +H PVFHQ+EGVRVF P+E+      A RE   V  L+ GLE +   +FG D ++RWVD  FPFT+PSFELE+ F G+WLEVLGCG I R V+   G+D  TVGWAFGLGLERLAM LF IPDIRLFWS D RF SQF+ AG   TFKPYSK+PPC KDV+FW+P   A     FH +D++E +R VAGD+VE++A +DEF HPKTGR S C+R+ YRSMDRSLTN+EVDALQE VR+ L  KL +ELR
Sbjct:  173 SHYPVFHQMEGVRVFAPDELPAGATAAEREALAVADLRAGLEGLACALFG-DVEMRWVDAYFPFTNPSFELEIFFGGKWLEVLGCGAIERDVMRAGGMDDATVGWAFGLGLERLAMVLFSIPDIRLFWSDDARFTSQFK-AGAATTFKPYSKYPPCLKDVSFWVPGATAEIAHGFHDNDMYEAVREVAGDMVEEIALVDEFAHPKTGRVSKCFRLTYRSMDRSLTNKEVDALQELVRQRLVDKLGVELR 419          
BLAST of mRNA_M-pyrifera_M_contig66581.16143.1 vs. uniprot
Match: A0A7S2WCK3_9STRA (Phenylalanine--tRNA ligase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WCK3_9STRA)

HSP 1 Score: 304 bits (779), Expect = 2.850e-99
Identity = 152/244 (62.30%), Postives = 184/244 (75.41%), Query Frame = 1
Query:    1 THSPVFHQLEGVRVFGPEEVGHLGEQAREEYVVTHLKGGLEAMVRKMFGADAKLRWVDESFPFTDPSFELEVEFQGEWLEVLGCGVIARGVLDNAGIDKDTVGWAFGLGLERLAMRLFDIPDIRLFWSTDPRFLSQFQGAGTDVTFKPYSKFPPCYKDVAFWIPQNDAFHLHDVFETIRNVAGD-LVEDVACIDEFTHPKTGRTSHCYRINYRSMDRSLTNQEVDALQEEVREHLQTKLNLELR 729
            +H PVFHQ+EGV++F P E     EQ  E+     LK  LE +VR +FG D ++RWV+  FPFTDPS ELE+ F  EW+EVLGCGVI +G++DN G+  D  GWAFGLGLERLAM LFDIPDIRLFW+ D RF +QF   G    FKPYSK+PPC KD++FW+P NDAFH +D+F  IR+ AGD LVE V  IDEFTHPKT RTSHCYRI+YRSMDRSLTN+E+D +QE +REH+  KL +ELR
Sbjct:  185 SHYPVFHQMEGVKIF-PRESNVTSEQVEED-----LKKSLEGLVRTIFG-DVEMRWVEAYFPFTDPSIELEIWFNDEWMEVLGCGVIHQGIMDNCGLG-DQKGWAFGLGLERLAMVLFDIPDIRLFWTDDSRFHTQFTD-GAITKFKPYSKYPPCLKDMSFWLPDNDAFHPNDLFSAIRDCAGDDLVERVTLIDEFTHPKTSRTSHCYRISYRSMDRSLTNEEIDTIQENIREHVTQKLGVELR 419          
BLAST of mRNA_M-pyrifera_M_contig66581.16143.1 vs. uniprot
Match: E1Z8H9_CHLVA (Phenylalanine--tRNA ligase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z8H9_CHLVA)

HSP 1 Score: 293 bits (749), Expect = 2.760e-95
Identity = 149/244 (61.07%), Postives = 183/244 (75.00%), Query Frame = 1
Query:    1 THSPVFHQLEGVRVFGPEEVGHLGEQAREEYVVTHLKGGLEAMVRKMFGADAKLRWVDESFPFTDPSFELEVEFQGEWLEVLGCGVIARGVLD-NAGIDKDTVGWAFGLGLERLAMRLFDIPDIRLFWSTDPRFLSQFQGAGTDVTFKPYSKFPPCYKDVAFWIPQNDAFHLHDVFETIRNVAGDLVEDVACIDEFTHPKTGRTSHCYRINYRSMDRSLTNQEVDALQEEVREHLQTKLNLELR 729
            TH PVFHQ+EGVRVF PE+    G +A + +    LK  LE + + +FG   ++RW+D  FPFTDPSFELE+ F GEWLEVLGCGV+ + +L+ N+G D+    WAFGLGLERLAM LFDIPDIRLFW++D RFL QF+     + FK YSK+PPCYKDVAFWI  +DAF  +++ E +R +AGDL E+V  ID FTHPKTGRTSHCYRI YRSMDRSLT+ EV+ALQEEVR  +  KL +ELR
Sbjct:  141 THYPVFHQMEGVRVFSPEDWHAAGMEATQ-FAEGELKRTLEGLAQHLFGK-VEMRWIDAYFPFTDPSFELEIFFNGEWLEVLGCGVMQQQILEKNSGPDQKA--WAFGLGLERLAMVLFDIPDIRLFWTSDQRFLKQFKTGDMSIKFKSYSKYPPCYKDVAFWI--SDAFTENNLCEVVRGIAGDLAEEVKLIDNFTHPKTGRTSHCYRIAYRSMDRSLTDDEVNALQEEVRSTVADKLKVELR 378          
BLAST of mRNA_M-pyrifera_M_contig66581.16143.1 vs. uniprot
Match: A0A7S1ZPZ1_TRICV (Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZPZ1_TRICV)

HSP 1 Score: 290 bits (743), Expect = 4.130e-94
Identity = 147/247 (59.51%), Postives = 172/247 (69.64%), Query Frame = 1
Query:    1 THSPVFHQLEGVRVFGPEEVGHLGEQAREEYVVT---HLKGGLEAMVRKMFGADAKLRWVDESFPFTDPSFELEVEFQGEWLEVLGCGVIARGVLDNAGIDKDTVGWAFGLGLERLAMRLFDIPDIRLFWSTDPRFLSQFQGAGTDVTFKPYSKFPPCYKDVAFWI-------------PQNDAFHLHDVFETIRNVAGDLVEDVACIDEFTHPKTGRTSHCYRINYRSMDRSLTNQEVDALQEEVR 693
            TH PVFHQ+EGVR+F  EE+   G    EE +      LK  LE + R +FG+D + RWV E FPFTDPSFELEV   GEWLEVLGCGV+ R ++ NAG+     GWAFGLGLERLAM LF IPDIRLFW+ D RF SQF+    DVTF+PYSK+PPC+KD++FWI             P    FH +D +E +R+  GDLVE V  IDEF HPKTGRTS CYRI+YRSMDRSLTN+EVD LQE VR
Sbjct:  144 THYPVFHQMEGVRIFTEEELAASGASTEEEGIELAERDLKLRLEGLARALFGSDVETRWVGEYFPFTDPSFELEVMHGGEWLEVLGCGVVHRDIIQNAGLGMRP-GWAFGLGLERLAMVLFSIPDIRLFWTDDERFHSQFEPGRVDVTFEPYSKYPPCFKDISFWIDEGMDDDDGSDDGPDAAPFHENDFYEVVRDAGGDLVERVELIDEFLHPKTGRTSKCYRISYRSMDRSLTNEEVDLLQERVR 389          
BLAST of mRNA_M-pyrifera_M_contig66581.16143.1 vs. uniprot
Match: D8LK58_ECTSI (Phenylalanine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK58_ECTSI)

HSP 1 Score: 290 bits (743), Expect = 4.260e-94
Identity = 148/244 (60.66%), Postives = 182/244 (74.59%), Query Frame = 1
Query:    1 THSPVFHQLEGVRVFGPEEV-GHLGEQAREEYVVTHLKGGLEAMVRKMFGADAKLRWVDESFPFTDPSFELEVEFQGEWLEVLGCGVIARGVLDNAGIDKDTVGWAFGLGLERLAMRLFDIPDIRLFWSTDPRFLSQFQGAGTDVTFKPYSKFPPCYKDVAFWIPQNDAFHLHDVFETIRNVAGDLVEDVACIDEFTHPKTGRTSHCYRINYRSMDRSLTNQEVDALQEEVREHLQTKLNLELR 729
            TH PVFHQ+EGVR+   EE         R+E     LK GLE +   +FG + ++RWVD  FPFT PS ELE+ F+G+W+EVLGCGVI   V+DNAG   + VGWAFGLGLERLAM LF IPDIRLFWS DPRF SQF+ A T  TF+PYSK+PPCYKDV FW+P+ D FH +D+FE +R+VAGDLVE++  +D+F HPKT R S C+RI YRSMDRSLTN+EVD LQE VR ++ ++L+ ELR
Sbjct:  160 THYPVFHQMEGVRILTEEEAPARWDVSQRKEIASKDLKRGLEGLATNLFG-NVEMRWVDAYFPFTTPSAELEILFRGKWMEVLGCGVIHDEVMDNAGRTGE-VGWAFGLGLERLAMVLFSIPDIRLFWSEDPRFSSQFE-AKTLTTFQPYSKYPPCYKDVTFWLPE-DNFHNNDLFEVVRDVAGDLVEEIRLLDDFIHPKTQRKSRCFRITYRSMDRSLTNEEVDRLQEIVRGYITSRLDAELR 399          
BLAST of mRNA_M-pyrifera_M_contig66581.16143.1 vs. uniprot
Match: A0A2P6TT79_CHLSO (Phenylalanine--tRNA ligase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TT79_CHLSO)

HSP 1 Score: 290 bits (742), Expect = 1.680e-93
Identity = 146/243 (60.08%), Postives = 179/243 (73.66%), Query Frame = 1
Query:    1 THSPVFHQLEGVRVFGPEEVGHLGEQAREEYVVTHLKGGLEAMVRKMFGADAKLRWVDESFPFTDPSFELEVEFQGEWLEVLGCGVIARGVLDNAGIDKDTVGWAFGLGLERLAMRLFDIPDIRLFWSTDPRFLSQFQGAGTDVTFKPYSKFPPCYKDVAFWIPQNDAFHLHDVFETIRNVAGDLVEDVACIDEFTHPKTGRTSHCYRINYRSMDRSLTNQEVDALQEEVREHLQTKLNLELR 729
            TH PVFHQ+EGVRVF P +    G  A + +  T LK  LE + + +FGA  ++RWVD  FPFT+PS+ELE+ F GEWLEVLGCGV+ + +LD   +      WAFGLGLERLAM LFDIPDIRLFW+ D RFL QF+       FK YSK+PPCYKDVAFWI  +DAF  +++ E +R+VAGDL E+V  ID FTHPKTGRTSHCYRI YRSMDRSLT++E++ALQ+EVR  +  KL +ELR
Sbjct:  196 THYPVFHQMEGVRVFNPADWQAAGMDATQ-FAETELKRTLEGLAQHLFGA-VEMRWVDAYFPFTEPSYELEIFFNGEWLEVLGCGVMQQPILDK-NLGPGQKAWAFGLGLERLAMVLFDIPDIRLFWTADQRFLKQFKAGDLTTKFKSYSKYPPCYKDVAFWI--SDAFTENNLCEIVRSVAGDLAEEVKLIDNFTHPKTGRTSHCYRIAYRSMDRSLTDEEINALQDEVRSTISDKLKVELR 433          
BLAST of mRNA_M-pyrifera_M_contig66581.16143.1 vs. uniprot
Match: A0A024TS89_9STRA (Phenylalanine--tRNA ligase n=11 Tax=Aphanomyces TaxID=100860 RepID=A0A024TS89_9STRA)

HSP 1 Score: 288 bits (737), Expect = 2.860e-93
Identity = 146/243 (60.08%), Postives = 180/243 (74.07%), Query Frame = 1
Query:    1 THSPVFHQLEGVRVFGPEEVGHLGEQAREEYVVTHLKGGLEAMVRKMFGADAKLRWVDESFPFTDPSFELEVEFQGEWLEVLGCGVIARGVLDNAGIDKDTVGWAFGLGLERLAMRLFDIPDIRLFWSTDPRFLSQFQGAGTDVTFKPYSKFPPCYKDVAFWIPQNDAFHLHDVFETIRNVAGDLVEDVACIDEFTHPKTGRTSHCYRINYRSMDRSLTNQEVDALQEEVREHLQTKLNLELR 729
            +H PVFHQ+EG+R F PE    +   AR   V  HLK  LE MV  +FG   ++RWVD  FPFTDPS ELE+ F+GEWLEVLGCGV+ R + ++ G+  D VGWAFGLGLERLAM LFDIPDIRLFW+TD RFLSQFQ  G    FKPYSK+PPCYKDV+FW+P    FH +++FE +RNVAGD+VE V  +D FTHPKT R+S C+RI YR +DR+LTN+EVD +Q  VR+ +  +L +ELR
Sbjct:  157 SHYPVFHQMEGLRFF-PELSRSIPYDARVALVQEHLKTTLEGMVESIFGK-VEMRWVDAYFPFTDPSLELEIYFEGEWLEVLGCGVLQRQIAEHGGV-VDEVGWAFGLGLERLAMVLFDIPDIRLFWTTDARFLSQFQD-GVISKFKPYSKYPPCYKDVSFWLPPE--FHENNLFEVVRNVAGDMVEQVVLVDAFTHPKTQRSSKCFRITYRHLDRNLTNEEVDDIQVVVRDAMVKELGVELR 393          
BLAST of mRNA_M-pyrifera_M_contig66581.16143.1 vs. uniprot
Match: A0A7S3UEM4_9CHLO (Phenylalanine--tRNA ligase n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UEM4_9CHLO)

HSP 1 Score: 288 bits (736), Expect = 4.180e-93
Identity = 148/246 (60.16%), Postives = 180/246 (73.17%), Query Frame = 1
Query:    1 THSPVFHQLEGVRVFGPEE---VGHLGEQAREEYVVTHLKGGLEAMVRKMFGADAKLRWVDESFPFTDPSFELEVEFQGEWLEVLGCGVIARGVLDNAGIDKDTVGWAFGLGLERLAMRLFDIPDIRLFWSTDPRFLSQFQGAGTDVTFKPYSKFPPCYKDVAFWIPQNDAFHLHDVFETIRNVAGDLVEDVACIDEFTHPKTGRTSHCYRINYRSMDRSLTNQEVDALQEEVREHLQTKLNLELR 729
            TH PVFHQ+EGVRVF PEE    G  G +  E+     LK  LE + R +FG D ++RW+DE FPFTDPSFELE+ F  EW+EVLGCGV+ + +L+ AG+      WAFGLGLERLAM LF+IPDIRLFWSTD RFLSQF+       FK YSKFPPC+KDV+FWIP+N  F  +++ E  R +AGDLVE+V  IDEF +PK GRTSHCYRI YRSM+RSLT++EV+ LQE VR  L  +L +ELR
Sbjct:  157 THYPVFHQMEGVRVFEPEEWEVAGVDGTKLAEK----ELKSTLEGLARHLFG-DVEMRWIDEYFPFTDPSFELEIFFNDEWMEVLGCGVMEQAILEEAGLGNKKA-WAFGLGLERLAMVLFEIPDIRLFWSTDQRFLSQFKAGDMSAKFKAYSKFPPCFKDVSFWIPEN--FTENNLCEVTRGIAGDLVEEVKLIDEFHNPKKGRTSHCYRIAYRSMERSLTDEEVNQLQESVRSSLVDQLGVELR 394          
BLAST of mRNA_M-pyrifera_M_contig66581.16143.1 vs. uniprot
Match: A0A5A8DG57_CAFRO (Phenylalanine--tRNA ligase n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DG57_CAFRO)

HSP 1 Score: 287 bits (734), Expect = 1.580e-92
Identity = 143/248 (57.66%), Postives = 177/248 (71.37%), Query Frame = 1
Query:    1 THSPVFHQLEGVRVFGPEEVG-----HLGEQAREEYVVTHLKGGLEAMVRKMFGADAKLRWVDESFPFTDPSFELEVEFQGEWLEVLGCGVIARGVLDNAGIDKDTVGWAFGLGLERLAMRLFDIPDIRLFWSTDPRFLSQFQGAGTDVTFKPYSKFPPCYKDVAFWIPQNDAFHLHDVFETIRNVAGDLVEDVACIDEFTHPKTGRTSHCYRINYRSMDRSLTNQEVDALQEEVREHLQTKLNLELR 729
            TH PVFHQ+EG+RVFGP+E+              ++V   L+  L+ MV  +FGAD + +W D+ FPFTDPSFELE+++ G+WLE+LGCG++ R ++ N G+  D VGWAFG+GLER+AM  F IPDIRLFW+ D RF  QF G+  D  F+ YSK+PPC KDVAFW P     H +DV+ETIR  AGDLVE V  IDEFTHPKTGR S CYR+ YRSMDRSLTN EVD LQE+VR+ L   L +ELR
Sbjct:  172 THYPVFHQVEGLRVFGPDELPPGLPCDATHPETRDFVCRDLRACLDHMVDGLFGADVERKWSDDYFPFTDPSFELEIQYNGKWLELLGCGMVHRDIMTNCGLG-DRVGWAFGIGLERVAMARFGIPDIRLFWTDDERFHKQFDGS-MDTRFESYSKYPPCNKDVAFWTPPG--LHANDVYETIRETAGDLVESVELIDEFTHPKTGRHSTCYRVCYRSMDRSLTNAEVDLLQEQVRDRLSNFLGVELR 415          
BLAST of mRNA_M-pyrifera_M_contig66581.16143.1 vs. uniprot
Match: A0A2K1KJW6_PHYPA (Phenylalanine--tRNA ligase n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KJW6_PHYPA)

HSP 1 Score: 289 bits (739), Expect = 1.860e-92
Identity = 143/243 (58.85%), Postives = 178/243 (73.25%), Query Frame = 1
Query:    1 THSPVFHQLEGVRVFGPEEVGHLGEQAREEYVVTHLKGGLEAMVRKMFGADAKLRWVDESFPFTDPSFELEVEFQGEWLEVLGCGVIARGVLDNAGIDKDTVGWAFGLGLERLAMRLFDIPDIRLFWSTDPRFLSQFQGAGTDVTFKPYSKFPPCYKDVAFWIPQNDAFHLHDVFETIRNVAGDLVEDVACIDEFTHPKTGRTSHCYRINYRSMDRSLTNQEVDALQEEVREHLQTKLNLELR 729
            TH PVFHQ+EG RVF PEE    G      Y    LK  LE + R++FG + ++RWVD  FPFT+PS+ELE+ FQG+WLEVLGCGV  + +L N G D  TV WAFGLGLERLAM LFDIPDIRLFW+ D RF SQF+       FK YSK+PPCYKD++FWI  ++ F  +++ E +R +AGDL E+V  IDEFT+PK G TSHCYRI YRSM+RSLT++E++ LQ +VRE +QTKLN+ LR
Sbjct:  242 THYPVFHQMEGFRVFTPEEWEAAGSSDGTAYAAQDLKKTLEGLARRLFG-EVEMRWVDCYFPFTEPSYELEIFFQGKWLEVLGCGVTEQAILKNNGRDG-TVAWAFGLGLERLAMVLFDIPDIRLFWTNDSRFTSQFKSGQLGTKFKAYSKYPPCYKDISFWI--SEQFTENNLCEVVRGIAGDLAEEVVLIDEFTNPKKGLTSHCYRIAYRSMERSLTDEEINELQSQVREQVQTKLNVTLR 480          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66581.16143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CML8_9STRA1.420e-9961.85Phenylalanine--tRNA ligase n=1 Tax=Tribonema minus... [more]
A0A7S2WCK3_9STRA2.850e-9962.30Phenylalanine--tRNA ligase n=1 Tax=labyrinthulid q... [more]
E1Z8H9_CHLVA2.760e-9561.07Phenylalanine--tRNA ligase n=1 Tax=Chlorella varia... [more]
A0A7S1ZPZ1_TRICV4.130e-9459.51Phenylalanine--tRNA ligase (Fragment) n=1 Tax=Trie... [more]
D8LK58_ECTSI4.260e-9460.66Phenylalanine--tRNA ligase n=1 Tax=Ectocarpus sili... [more]
A0A2P6TT79_CHLSO1.680e-9360.08Phenylalanine--tRNA ligase n=1 Tax=Chlorella sorok... [more]
A0A024TS89_9STRA2.860e-9360.08Phenylalanine--tRNA ligase n=11 Tax=Aphanomyces Ta... [more]
A0A7S3UEM4_9CHLO4.180e-9360.16Phenylalanine--tRNA ligase n=1 Tax=Picocystis sali... [more]
A0A5A8DG57_CAFRO1.580e-9257.66Phenylalanine--tRNA ligase n=4 Tax=Cafeteria roenb... [more]
A0A2K1KJW6_PHYPA1.860e-9258.85Phenylalanine--tRNA ligase n=2 Tax=Physcomitrium p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66581contigM-pyrifera_M_contig66581:561..1292 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score295.0
Seed ortholog evalue3.1e-77
Seed eggNOG ortholog554065.XP_005849441.1
KEGG rclassRC00055,RC00523
KEGG koko:K01889
KEGG ReactionR03660
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Ferredoxin-fold anticodon binding domain
EggNOG OGs34GRP@3041,37M48@33090,COG0016@1,KOG2783@2759
Ec32 ortholog descriptionPhenylalanine--tRNA ligase
Ec32 orthologEc-06_008260.1
EC6.1.1.20
COG Functional cat.J
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Exons1
Model size732
Cds size732
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816556.417643-CDS-M-pyrifera_M_contig66581:560..12921622816556.417643-CDS-M-pyrifera_M_contig66581:560..1292Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66581 561..1292 -
1692278044.840031-CDS-M-pyrifera_M_contig66581:560..12921692278044.840031-CDS-M-pyrifera_M_contig66581:560..1292Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66581 561..1292 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66581.16143.1prot_M-pyrifera_M_contig66581.16143.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig66581 561..1292 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig66581.16143.1

>prot_M-pyrifera_M_contig66581.16143.1 ID=prot_M-pyrifera_M_contig66581.16143.1|Name=mRNA_M-pyrifera_M_contig66581.16143.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=244bp
THSPVFHQLEGVRVFGPEEVGHLGEQAREEYVVTHLKGGLEAMVRKMFGA
DAKLRWVDESFPFTDPSFELEVEFQGEWLEVLGCGVIARGVLDNAGIDKD
TVGWAFGLGLERLAMRLFDIPDIRLFWSTDPRFLSQFQGAGTDVTFKPYS
KFPPCYKDVAFWIPQNDAFHLHDVFETIRNVAGDLVEDVACIDEFTHPKT
GRTSHCYRINYRSMDRSLTNQEVDALQEEVREHLQTKLNLELR*
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mRNA from alignment at M-pyrifera_M_contig66581:561..1292-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig66581.16143.1 ID=mRNA_M-pyrifera_M_contig66581.16143.1|Name=mRNA_M-pyrifera_M_contig66581.16143.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=732bp|location=Sequence derived from alignment at M-pyrifera_M_contig66581:561..1292- (Macrocystis pyrifera P11B4 male)
ACGCATTCTCCCGTGTTCCACCAGCTGGAAGGGGTGCGGGTGTTCGGTCC CGAGGAAGTGGGCCATTTGGGCGAGCAAGCGAGGGAGGAGTATGTGGTGA CACACCTCAAGGGCGGGTTGGAGGCCATGGTGCGGAAAATGTTTGGAGCG GATGCGAAACTGCGATGGGTCGACGAATCGTTCCCTTTCACCGACCCTTC GTTCGAGCTGGAGGTCGAATTCCAGGGAGAATGGCTCGAGGTGTTGGGTT GTGGGGTCATCGCAAGGGGAGTGCTGGATAACGCGGGCATCGACAAGGAC ACTGTGGGTTGGGCGTTTGGGTTGGGGCTTGAACGCCTGGCCATGCGCCT TTTTGACATTCCCGACATCCGACTCTTCTGGTCCACCGATCCAAGGTTCC TCTCCCAGTTCCAGGGCGCTGGAACCGACGTCACCTTCAAACCATACTCC AAGTTCCCTCCGTGCTACAAGGACGTCGCCTTCTGGATCCCACAAAACGA CGCCTTCCACCTCCACGACGTCTTCGAAACCATCAGAAACGTAGCGGGTG ACCTCGTGGAGGACGTGGCATGCATCGACGAATTCACACACCCCAAAACC GGAAGAACATCGCACTGCTACAGAATCAACTACAGATCCATGGACAGAAG CCTTACCAACCAAGAAGTCGACGCGCTGCAGGAGGAAGTGAGGGAACACC TGCAAACAAAACTCAACCTTGAATTGCGATAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig66581:561..1292-

>mRNA_M-pyrifera_M_contig66581.16143.1 ID=mRNA_M-pyrifera_M_contig66581.16143.1|Name=mRNA_M-pyrifera_M_contig66581.16143.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1464bp|location=Sequence derived from alignment at M-pyrifera_M_contig66581:561..1292- (Macrocystis pyrifera P11B4 male)
ACGCATTCTCCCGTGTTCCACCAGCTGGAAGGGGTGCGGGTGTTCGGTCC
CGAGGAAGTGGGCCATTTGGGCGAGCAAGCGAGGGAGGAGTATGTGGTGA
CACACCTCAAGGGCGGGTTGGAGGCCATGGTGCGGAAAATGTTTGGAGCG
GATGCGAAACTGCGATGGGTCGACGAATCGTTCCCTTTCACCGACCCTTC
GTTCGAGCTGGAGGTCGAATTCCAGGGAGAATGGCTCGAGGTGTTGGGTT
GTGGGGTCATCGCAAGGGGAGTGCTGGATAACGCGGGCATCGACAAGGAC
ACTGTGGGTTGGGCGTTTGGGTTGGGGCTTGAACGCCTGGCCATGCGCCT
TTTTGACATTCCCGACATCCGACTCTTCTGGTCCACCGATCCAAGGTTCC
TCTCCCAGTTCCAGGGCGCTGGAACCGACGTCACCTTCAAACCATACTCC
AAGTTCCCTCCGTGCTACAAGGACGTCGCCTTCTGGATCCCACAAAACGA
CGCCTTCCACCTCCACGACGTCTTCGAAACCATCAGAAACGTAGCGGGTG
ACCTCGTGGAGGACGTGGCATGCATCGACGAATTCACACACCCCAAAACC
GGAAGAACATCGCACTGCTACAGAATCAACTACAGATCCATGGACAGAAG
CCTTACCAACCAAGAAGTCGACGCGCTGCAGGAGGAAGTGAGGGAACACC
TGCAAACAAAACTCAACCTTGAATTGCGATAAACGCATTCTCCCGTGTTC
CACCAGCTGGAAGGGGTGCGGGTGTTCGGTCCCGAGGAAGTGGGCCATTT
GGGCGAGCAAGCGAGGGAGGAGTATGTGGTGACACACCTCAAGGGCGGGT
TGGAGGCCATGGTGCGGAAAATGTTTGGAGCGGATGCGAAACTGCGATGG
GTCGACGAATCGTTCCCTTTCACCGACCCTTCGTTCGAGCTGGAGGTCGA
ATTCCAGGGAGAATGGCTCGAGGTGTTGGGTTGTGGGGTCATCGCAAGGG
GAGTGCTGGATAACGCGGGCATCGACAAGGACACTGTGGGTTGGGCGTTT
GGGTTGGGGCTTGAACGCCTGGCCATGCGCCTTTTTGACATTCCCGACAT
CCGACTCTTCTGGTCCACCGATCCAAGGTTCCTCTCCCAGTTCCAGGGCG
CTGGAACCGACGTCACCTTCAAACCATACTCCAAGTTCCCTCCGTGCTAC
AAGGACGTCGCCTTCTGGATCCCACAAAACGACGCCTTCCACCTCCACGA
CGTCTTCGAAACCATCAGAAACGTAGCGGGTGACCTCGTGGAGGACGTGG
CATGCATCGACGAATTCACACACCCCAAAACCGGAAGAACATCGCACTGC
TACAGAATCAACTACAGATCCATGGACAGAAGCCTTACCAACCAAGAAGT
CGACGCGCTGCAGGAGGAAGTGAGGGAACACCTGCAAACAAAACTCAACC
TTGAATTGCGATAA
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