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Homology
BLAST of mRNA_M-pyrifera_M_contig6658.16142.1 vs. uniprot
Match: D7FUM9_ECTSI (Ribosomal protein S23, component of cytosolic 80S ribosome and 40S small subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUM9_ECTSI) HSP 1 Score: 287 bits (735), Expect = 1.860e-94 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1
Query: 73 SMGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 510
SMGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS
Sbjct: 61 SMGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 206
BLAST of mRNA_M-pyrifera_M_contig6658.16142.1 vs. uniprot
Match: A0A835Z8V8_9STRA (Putative ribosomal protein S23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V8_9STRA) HSP 1 Score: 275 bits (702), Expect = 2.350e-90 Identity = 136/145 (93.79%), Postives = 144/145 (99.31%), Query Frame = 1
Query: 76 MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 510
MGKGKP+GIRAGRKLRIHRRN+RWASKDYNK+HSVTAMKANPLGG+SMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLN+TDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGV++LALYK KKEKPRS
Sbjct: 1 MGKGKPSGIRAGRKLRIHRRNQRWASKDYNKAHSVTAMKANPLGGASMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVSILALYKGKKEKPRS 145
BLAST of mRNA_M-pyrifera_M_contig6658.16142.1 vs. uniprot
Match: W7TKK2_9STRA (40s ribosomal protein s23 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKK2_9STRA) HSP 1 Score: 258 bits (660), Expect = 5.550e-84 Identity = 127/145 (87.59%), Postives = 138/145 (95.17%), Query Frame = 1
Query: 76 MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 510
MGKGKPAG AGRKLR+HRRNE+WASK +NK+HSVT MKANPLGG++MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLNF DENDEVLI+GFGR GHAVGDIPGVRFKV+KV+GV LLAL+KDKKEKPRS
Sbjct: 1 MGKGKPAGSNAGRKLRVHRRNEKWASKRWNKAHSVTHMKANPLGGAAMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFVDENDEVLIAGFGRSGHAVGDIPGVRFKVIKVSGVGLLALFKDKKEKPRS 145
BLAST of mRNA_M-pyrifera_M_contig6658.16142.1 vs. uniprot
Match: M4BPE8_HYAAE (Uncharacterized protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=M4BPE8_HYAAE) HSP 1 Score: 255 bits (652), Expect = 9.080e-83 Identity = 128/145 (88.28%), Postives = 135/145 (93.10%), Query Frame = 1
Query: 76 MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 510
MGK KP+GIR RKLR+HRR +RWA K YNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRK RVQLIKN KK+AAFVPRDGCLNF DENDEVLISGFGRRGHAVGDIPGVRFKVVKV+GV+LLALYK+KKEKPRS
Sbjct: 1 MGKHKPSGIRCARKLRVHRRTQRWAQKSYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKSCRVQLIKNSKKIAAFVPRDGCLNFVDENDEVLISGFGRRGHAVGDIPGVRFKVVKVSGVSLLALYKEKKEKPRS 145
BLAST of mRNA_M-pyrifera_M_contig6658.16142.1 vs. uniprot
Match: A0A4W5LQ08_9TELE (40S ribosomal protein S23 n=31 Tax=Eukaryota TaxID=2759 RepID=A0A4W5LQ08_9TELE) HSP 1 Score: 253 bits (646), Expect = 1.600e-81 Identity = 125/140 (89.29%), Postives = 132/140 (94.29%), Query Frame = 1
Query: 91 PAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 510
PAGIR RKLR+HRR +RW K YNKSHS+TAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKC RVQLIKNGKK+AAFVPRDGCLN+ DENDEVLI+GFGRRGHAVGDIPGVRFKVVKVAGV+LLALYKDKKEKPRS
Sbjct: 29 PAGIRCARKLRVHRRTQRWNQKSYNKSHSITAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPRDGCLNYVDENDEVLIAGFGRRGHAVGDIPGVRFKVVKVAGVSLLALYKDKKEKPRS 168
BLAST of mRNA_M-pyrifera_M_contig6658.16142.1 vs. uniprot
Match: A0A7S2WV04_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV04_9STRA) HSP 1 Score: 250 bits (639), Expect = 1.270e-80 Identity = 125/146 (85.62%), Postives = 138/146 (94.52%), Query Frame = 1
Query: 73 SMGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 510
+MGK KP+GIRAGRKLR+HRR +RWA+ Y KS+SVTA+KANP GG+ MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLNFTDENDEVLI+GFGRRGHAVGDIPGVRFKVVKVAGV+LLAL+K KKEKPR+
Sbjct: 12 TMGKHKPSGIRAGRKLRVHRRAQRWANLKYVKSNSVTALKANPFGGACMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNFTDENDEVLIAGFGRRGHAVGDIPGVRFKVVKVAGVSLLALFKGKKEKPRT 157
BLAST of mRNA_M-pyrifera_M_contig6658.16142.1 vs. uniprot
Match: B8C1Z7_THAPS (RS23, ribosomal protein 23 40S small ribosomal subunit n=15 Tax=Bacillariophyta TaxID=2836 RepID=B8C1Z7_THAPS) HSP 1 Score: 249 bits (637), Expect = 1.600e-80 Identity = 123/142 (86.62%), Postives = 133/142 (93.66%), Query Frame = 1
Query: 85 GKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 510
GKPAGIR GRKLRIHRRN+RW Y K+HSVTAMKANP+GGS+MAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLN+ DENDEVL++GFGR GHAVGDIPGVRFK VKVAGV+LLALYK+KKEKPRS
Sbjct: 2 GKPAGIRTGRKLRIHRRNQRWHDLKYTKAHSVTAMKANPMGGSTMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYVDENDEVLVAGFGRSGHAVGDIPGVRFKCVKVAGVSLLALYKEKKEKPRS 143
BLAST of mRNA_M-pyrifera_M_contig6658.16142.1 vs. uniprot
Match: A0A5A8EIQ0_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EIQ0_CAFRO) HSP 1 Score: 247 bits (630), Expect = 1.960e-79 Identity = 123/145 (84.83%), Postives = 133/145 (91.72%), Query Frame = 1
Query: 76 MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 510
M +GKPAGI+A RKLR HRR +RWA K YNKSHS+TAMKANP GG+SMAKGIVLEK+G+EAKQPNSAIRKC RVQLIKNGKK+AAFVPRDG LNF DENDEVLISGFGR GHAVGDIPGVRFKVVKVAGV+LLAL+K KKEKPRS
Sbjct: 1 MTRGKPAGIQAARKLRNHRREQRWAQKTYNKSHSITAMKANPFGGASMAKGIVLEKMGVEAKQPNSAIRKCARVQLIKNGKKIAAFVPRDGSLNFVDENDEVLISGFGRAGHAVGDIPGVRFKVVKVAGVSLLALFKGKKEKPRS 145
BLAST of mRNA_M-pyrifera_M_contig6658.16142.1 vs. uniprot
Match: A0A8E8U732_9STRA (40S ribosomal protein S23 n=3 Tax=Placidida sp. TaxID=2810146 RepID=A0A8E8U732_9STRA) HSP 1 Score: 247 bits (630), Expect = 1.960e-79 Identity = 119/145 (82.07%), Postives = 135/145 (93.10%), Query Frame = 1
Query: 76 MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 510
MGKG PAGIRA RKLR HRR++RWA KDY KSHS++ +KANP G++MAKGIV+EK+GIEAKQPNSAIRKCVRVQLIKNGKK+AAFVPRDGCLN+ DENDEVL++GFGRRGHAVGDIPGVRFKVVKVAG +LLALYK+KKEKPR+
Sbjct: 1 MGKGLPAGIRAARKLRDHRRSQRWADKDYRKSHSLSTLKANPFAGATMAKGIVVEKLGIEAKQPNSAIRKCVRVQLIKNGKKIAAFVPRDGCLNYVDENDEVLVAGFGRRGHAVGDIPGVRFKVVKVAGASLLALYKEKKEKPRA 145
BLAST of mRNA_M-pyrifera_M_contig6658.16142.1 vs. uniprot
Match: A0A8E8PJI4_9STRA (40S ribosomal protein S23 n=2 Tax=Placidida sp. TaxID=2810146 RepID=A0A8E8PJI4_9STRA) HSP 1 Score: 247 bits (630), Expect = 1.960e-79 Identity = 123/145 (84.83%), Postives = 131/145 (90.34%), Query Frame = 1
Query: 76 MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAKGIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDENDEVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS 510
M KG PAG+RA RKLR HRR +RWA K YNKSHSV AMKANPLGGSSMAKGIV+EKIGIEAKQPNSAIRKCVRVQLIKN KK+ AFVP DGCLNF DENDEVL+SGFGR GHAVGDIPGVRFKVVKVAGV+LLAL+K KKEKPR+
Sbjct: 1 MSKGLPAGMRAARKLRTHRRKQRWAQKHYNKSHSVAAMKANPLGGSSMAKGIVVEKIGIEAKQPNSAIRKCVRVQLIKNSKKITAFVPNDGCLNFVDENDEVLVSGFGRSGHAVGDIPGVRFKVVKVAGVSLLALFKGKKEKPRA 145
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 288.5 |
| Seed ortholog evalue | 1.7e-75 |
| Seed eggNOG ortholog | 2880.D7FUM9 |
| Preferred name | RPS23 |
| KEGG ko | ko:K02973,ko:K03124 |
| KEGG Pathway | ko03010,ko03022,ko05169,ko05203,map03010,map03022,map05169,map05203 |
| KEGG Module | M00177 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000184,GO:0000462,GO:0000956,GO:0001666,GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005840,GO:0005844,GO:0006139,GO:0006355,GO:0006357,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006417,GO:0006450,GO:0006518,GO:0006605,GO:0006606,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0006950,GO:0006996,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009628,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0012505,GO:0015031,GO:0015833,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0017038,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030490,GO:0030867,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0031984,GO:0032268,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034063,GO:0034248,GO:0034470,GO:0034504,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0036293,GO:0036294,GO:0042175,GO:0042221,GO:0042254,GO:0042274,GO:0042788,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045182,GO:0045184,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046700,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051252,GO:0051254,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070482,GO:0070727,GO:0070887,GO:0070925,GO:0070972,GO:0071453,GO:0071456,GO:0071702,GO:0071704,GO:0071705,GO:0071826,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:0090304,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098827,GO:1901360,GO:1901361,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990145,GO:1990904,GO:2000112,GO:2000638,GO:2000640,GO:2001141 |
| EggNOG free text desc. | structural constituent of ribosome |
| EggNOG OGs | COG0048@1,KOG1749@2759 |
| Ec32 ortholog description | 40S ribosomal protein S23 |
| Ec32 ortholog | Ec-26_002100.1 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01610,ko00000,ko00001,ko00002,ko03011,ko03021 |
| Exons | 5 |
| Model size | 951 |
| Cds size | 438 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622816556.3039844-UTR-M-pyrifera_M_contig6658:2956..3023 | 1622816556.3039844-UTR-M-pyrifera_M_contig6658:2956..3023 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig6658 2957..3023 + |
| 1692278044.7636695-UTR-M-pyrifera_M_contig6658:2956..3023 | 1692278044.7636695-UTR-M-pyrifera_M_contig6658:2956..3023 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig6658 2957..3023 + |
| 1622816556.3183992-UTR-M-pyrifera_M_contig6658:4168..4176 | 1622816556.3183992-UTR-M-pyrifera_M_contig6658:4168..4176 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig6658 4169..4176 + |
| 1692278044.7777297-UTR-M-pyrifera_M_contig6658:4168..4176 | 1692278044.7777297-UTR-M-pyrifera_M_contig6658:4168..4176 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig6658 4169..4176 + |
| 1622816556.3799634-UTR-M-pyrifera_M_contig6658:11168..11606 | 1622816556.3799634-UTR-M-pyrifera_M_contig6658:11168..11606 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig6658 11169..11606 + |
| 1692278044.8285475-UTR-M-pyrifera_M_contig6658:11168..11606 | 1692278044.8285475-UTR-M-pyrifera_M_contig6658:11168..11606 | Macrocystis pyrifera P11B4 male | UTR | M-pyrifera_M_contig6658 11169..11606 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622816556.330664-CDS-M-pyrifera_M_contig6658:4176..4257 | 1622816556.330664-CDS-M-pyrifera_M_contig6658:4176..4257 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig6658 4177..4257 + |
| 1692278044.7874663-CDS-M-pyrifera_M_contig6658:4176..4257 | 1692278044.7874663-CDS-M-pyrifera_M_contig6658:4176..4257 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig6658 4177..4257 + |
| 1622816556.34521-CDS-M-pyrifera_M_contig6658:8590..8679 | 1622816556.34521-CDS-M-pyrifera_M_contig6658:8590..8679 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig6658 8591..8679 + |
| 1692278044.7994444-CDS-M-pyrifera_M_contig6658:8590..8679 | 1692278044.7994444-CDS-M-pyrifera_M_contig6658:8590..8679 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig6658 8591..8679 + |
| 1622816556.358502-CDS-M-pyrifera_M_contig6658:10199..10326 | 1622816556.358502-CDS-M-pyrifera_M_contig6658:10199..10326 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig6658 10200..10326 + |
| 1692278044.8091245-CDS-M-pyrifera_M_contig6658:10199..10326 | 1692278044.8091245-CDS-M-pyrifera_M_contig6658:10199..10326 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig6658 10200..10326 + |
| 1622816556.3692842-CDS-M-pyrifera_M_contig6658:11027..11168 | 1622816556.3692842-CDS-M-pyrifera_M_contig6658:11027..11168 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig6658 11028..11168 + |
| 1692278044.8183227-CDS-M-pyrifera_M_contig6658:11027..11168 | 1692278044.8183227-CDS-M-pyrifera_M_contig6658:11027..11168 | Macrocystis pyrifera P11B4 male | CDS | M-pyrifera_M_contig6658 11028..11168 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6658.16142.1 >prot_M-pyrifera_M_contig6658.16142.1 ID=prot_M-pyrifera_M_contig6658.16142.1|Name=mRNA_M-pyrifera_M_contig6658.16142.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
MGKGKPAGIRAGRKLRIHRRNERWASKDYNKSHSVTAMKANPLGGSSMAK GIVLEKIGIEAKQPNSAIRKCVRVQLIKNGKKLAAFVPRDGCLNFTDEND EVLISGFGRRGHAVGDIPGVRFKVVKVAGVALLALYKDKKEKPRS* back to topmRNA from alignment at M-pyrifera_M_contig6658:2957..11606+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_M-pyrifera_M_contig6658.16142.1 ID=mRNA_M-pyrifera_M_contig6658.16142.1|Name=mRNA_M-pyrifera_M_contig6658.16142.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8650bp|location=Sequence derived from alignment at M-pyrifera_M_contig6658:2957..11606+ (Macrocystis pyrifera P11B4 male) AGCAGCGGCAGCAAGCAACCTCAAGGTCTCTAACCTGTGCCACCTGGCCA
CTAGGTTAACCCTCAAGGTGAGGTGTGATCTTGGATTCTCCTGCGGTTTG
GTGTCAAGATAAAAATAAATCGGCGGTCCGGAATGCTTGTGCGACATCCT
TATCCATTGCACTGCTGTGGAAAGCATTTCGTTACGTAGTTCTCCATGGC
TGTGCTTTTGCCCACGGTGTTGGCGAGAGCTATGGGGCGCAAAGGGCTTC
TCTGCCACCAAAATGGATTGCTCCTACCGGCTTGCTGGCTTTCTGCTGGA
ACCAAGCGTGTTTCTTTCGCAGGACGTGTCGTGTTAGTGTGCTGCTCGCG
ATTTTTCCACCCAAGAGAGACAAAAATAGTTACTCGATTTTTTGGACTGC
TGTGGCGCCGTGCCCACATGGCAACCACCGATCGAGCAGTGCAATGCCCT
GGGTCCTCGCGAGTACTCGTAGCTAGCTAGCTGCCTGGGAAGTTTGGCGT
ACGGCCTGCAGCAGGCCCTGTAGGTCTGAACGCTGGCGGTATCTATACAC
ACCCTGCCATAGTTTGCTGGGTCCTAGTGCTTTGCCTCTCAAGATGCACC
GATTGGCAAGACGCATTTGTACGACGACTGACAGCAGTACGGGCAGTATG
CTGCCTTCACGAGTTAATCGTCTCCTGTGATCGCCTCCTCTCCTGCAACC
GTACCCCAGAAACACCGTTTGCGACGTATTTTTTGTCCTGCTGTACGTTG
CATACATACATACAAGCCAGGTACCGTTTTGTATGTACAGCAGTAGCGCG
TGCAGCGGAGAGACGCCAGTTGTATTTTCTTTGACAGCTTCTATGGGAGG
CCTCGTACCAATCACCAACAGACCCGATTCCATCCCCCCTCCTTCTCTTA
CCCCGCCCCTTCTCCCCTACGTGTACACATTCACCATGCGGTTTCCTTTC
GTGATTGCGTCGCCAATATGTACTACTACTATACTGTTCGTACACGTACA
CTCACTTTTTATCTTTCTGCTCGTTGTGTGCTTCCATTTTTTTACATCGC
TCTCTCTATATCTCTGTCTCCCCACCCTCTCTACAATGGCGGTAATGGCG
ATGGCGGATGGTGGTTGCAAACGAATCCACAAACAAATAAACGCCTCTTT
GGCGCTTTGCGACTGACTGCTTCTCTGCATAACTTGCCACACACCGGCGC
GGGCGAGAGCAGTCAAAAGTATGGGCAAGGGAAAGCCGGCGGGCATCCGC
GCGGGGCGCAAGCTCCGCATCCACCGCCGTAACGAACGGTGGGCGAGCAA
GGTAAGCGTTTGCCACAAGTGTGCAAGTCTGATTTCTACTGGCACTACTA
TCGATAGGTATCAACAGCAGAGAGTACACAGCAGTACCTGATGCCTGGTG
CTCGTAGAGCCGCCTTGTGCAAAATATTATACACAAGGCCAGCCGACAGT
AGACTCGGCACTATAGCGGCATCGGGCACTACTCCGCACGCTACCACACC
GCTTGGGAATCCCACCTGCCCCAAGCGATGGGCATTATAGACAACCGGCG
CTACAGAGGGACCACTACTGCTTGACCGGTACGAGTATACGTCGGGTACC
GGGTATTCGTAGCACATACCGCACCATAAATTTATTTATCCCGGTGTGAT
TCGTACCAGTATGCTACCGCATTTTGGGTGCGCCGTGCGTGCCGGCTGAG
CCCTGGCGGAGCAGGTGCGCAGCTGGAGTAAAATAAGGGTCGTAAGAAAA
GGGCGAGTCGCGGAGTTTGGGTGCAAGAAAACTTGTACGTCTGATTCCGG
TTGTAGCACAAGACGCTTGCTAGACTCGTACCAATCATCAACGAGGAAGG
TCGACACCAAGGCGGGCAGGCGCAATAAGGGTAAGGGAAAGAAGCGAAAA
GAGTCAGAGCACGACGAGGACCCGTCAAGGGTCCCAGCTGGATCTCTGAC
CCAGGTAGTACGGCGGCCGGCCACCGAAAGGCCCAAATGCGGCCACCCGG
GCTGCCCTAAGCCCGTCGGCCACACGACGGCAAAGTGCTACCAACGCACC
AGCGAGGAGAGGGTAGTTACCAAAGAACGCAGGTAGTGCGTACGGCAGCG
CGCGCGATGAAAGGCCCGGATGCGTCTATTGTACGCAACAGCCCGTCTGC
CACTCGACGGCACAAGTGCTATCAATAGCAGCGCATCCGCGAGTAGAAGG
TGGACACCAAGGCAAGTTGTCCCCCCTCTCCTCGCGTATGCGCTGGTTGC
ACTTGGCTGCCGTGTGGCCAACGGGCTTACTGCAGCCTGAGTAACCGCGT
TTGGGCCTTACTGTGCGGGCACTGCCGTGCTACTTGGATGCGTACCTGCG
TTTTTTCCTTGATTAGGCTCGTATCGGTTTTGGTTACAATGCAGCAGTTT
ACAGTTGTAATATGTGTCCACCCAAAAGGATGGTTTCAGACTTTGGAACG
AAGGTGGGAATTGCAGTGGGACAGGGGTACCCTTCTTGGGCGCCAGCATC
TCCAAGGTGGATGGTGACAAGCGGGCAAAAGGCCGACGATGCACCGGTAC
CATAGTGCGAAGCACGGACCGGCTGAGAGTGCCGGGACGAGGGAAACATG
GTTTCCCAAAGGCTTTCCAGGTATGAGCCAGTGACTCATAGTGGGGTGAC
GAAGGGAACAGACTACGGTCGAGCAGGGCAGGGCTAAGTCTCTCCTCCCA
CGTAATGAGGACGGGGTGGCCTTTGCCTAGACCGCCCGCGGCATGGTCTT
GGTATTCTGTTTGCCTTTGTGTGCTCTGGACTGGTCGCGATTTGTGGGGC
CTACCTCCCTTCGTCCGCCTTAACATACCGGTAGTGCTGTATCCTTTTCC
ATAAGGTCAATGGTAATCTGGATTGTCGGTCGATAGGTCCGGTTGGTTGA
TCAGTCGTCTGGTAGGTGTGTTGAGCAGTCGTCTCATTGGTTAGTTGATC
CGTGGTCCGGTCGGTCGACCAGTCTTGTGGTCGGTAGTTCGATCAGTCGT
TTGGTCTATCAATATTTAGCCCGGTAGTTGAACCAGCCGCCTGGTCGGTT
GATCCGTAGTCCTGTCAGTGGATCAGTCGTCTGGTCGGTCGATCGGTGGT
AGTCCAGTCGATCCACCAGTTGTCTGGTTGGTTGTTCGGCAGTCCGGTCG
GTCGATCGGTATCATAGCCCGTCCGATGGATCGATTGCCATGATGGCGCC
CTCGGTCGATCAAGTTGATCTGTTTTGTTGATTGGTCGTTGGGTTTGCCA
AGGTTCTTGCGATTAAGGCGAGCGACGGTGTGGTCGTGAATATTCCAAAG
CTGCCCGAAAGTTGAGTGTTGCGTGTGGAAAATTTGAGAATACTTTCCTC
AGGGTTTGATTCCGCCCCCGCCGAGCAAAGATATAGATGTCGCTTGATAG
CACTATTTGCCCCGTAGCGGACAGCCGCCAAGCTAAGGACCTCCCCACAC
CAAAAATGGTACCGGTGTAGTTTTTTTCGAAAGGCTTTGACGTGTCAAGA
CCGCCAACGGGCATGTTTCTGCCGACCACTTGACGGCACTCTTACCCCCA
TGACGGACAGCCGCCAAGGACTCCCCCACACACACTACACGTAGTAATTA
TTTGCAAGGCTTGACGTGTCAAGATCGTCAAAGGGCGTATTTGGGAACTA
CCGTCACCAAAACGAGCCTAACGTCTCTTACATACTTTTCGTCTTGTACA
AAAAACTACCAGGTATCAATTAATTAACACGGTATAGTTCTCAAGCATAA
GAGCACTCTACAGTAGATGAATCTGAAGAGAAGGTCTTGACGGGCCGAAA
CTATTGTACACCGCCACCCCGACTTGTTTGCTGCCTGGAGTCGGGTGGGA
GCTGGTACCTTTACAAAATCTACCAAACTTCCTCCTCTCCAGAGTAAAGG
AACGATCACGGTTTGTCCATCCATCTTCCCCTGGTGACCCGCCCACCTTG
ATCGCTTTTCGTGTGTTTTCTGGTATTCTACGTTATTTCGTTGTGACACT
GCATTGAAATGGGAAGCGGTATGCGTGCCGCGCCCATCCTTTATTTCTTG
TTCTATGGGTTATAGGAGTATGGGCCCCTCAACAAGAAACGCCTACTCTG
AGCTAAGCTGGAACCTTTTTGTAGCACGAAACGCCTGCATACTCTGGGCT
ACTGAACGCTTGAACCTTGTTCGGGCACCAACCTTAACCTTTGAGCATGT
ACAAGTATAGGCCCACGAATAAGAAACAAGCAAATAAGAATATCAATGCG
TACTTTTTGAGGAACGTGTCGAGCAAAAGGAGTTCATAGAACCTACTCGG
CGACGAGCGCTACACCTAGCCCTGAAGAAGAGCTCAAGCTCGAGGGTGTT
CAATTCTAGCTGGTTCTTGTCGGCGCGCGCGCCCATACTGCTGTAGGCTA
CCAGCATGTTCTACGGGAGTGAGTGTAGCTCTCGTTTTCACTGCTGAGCA
TGATTTTTTGTCCCAATGTTCAACACGTCGTGCAGATAGATCATGATTTA
TCTGTAGATCAGGTAGATCCTGATCTATCTCTGTACGGATGATCTGGTTC
CTCGACTGCCGCTATTGTGAGAAGTTGTGCAGGATCTGGATCGGTACAGT
ACAGATCGAACCCAGGAAACATGTGCTAGATCATGCAGATTATTACGGCT
CCCACCCCGGCAACACTTCGTAGCTACTGCTGTGGGTCATGCAAGATCAG
GAACGTATATTCCCTGGAAGATCTAGATGATGATCTATCTGTCCGAGATG
TGGGATGTTTTCTAACCCTTTTTTATTTTATATTTAGGTTGTAGTAGTGC
GCTGCTGTTCATGATGCATGAAGCTGAGCCTAGTTCCAAGCAGTGCATCC
CTCAAACGGGACTGCAGTCCTACTGTAAAGGAGACGGTTAAAAAAGATCG
AAAACAACTTGAAACGGACTTATTCCCTGCGTACTATCTCGATGGAAACC
CCGGAAAAGTTGCTCGTCGCCAGGCGTCGTCGGCTGGACTCCTGCCCTGT
CTTGTTTCTTGTCGGGCGGGGCTGTCGCCCGTTACGTGTTGGATGGAGGG
GTGTGACCCCTAATCCACGCGCGATATAGTAACGCGGCGAACGAGTTGTG
TTGGCGGATCAGGCACTTCACTTTTTCGATGCTTGATGGTTGCCACCGTG
GAAGGACTTTCGCCACGAAACGTTTTGCATAACCGTGTAAGGACCTCTCT
CTGTCTGCATGCGTATAGCGGCGAGTGCAAAATGCCGTTGCATGCTTCAG
GAAGCGACGGATTGAATGTTTGATTGTATTTATTTGGGAGATGTATGTAC
AACCATTGTTTGTAGTAATTACTTTTTTTTATTTTGGATCTCGTGATTTC
AGTCCCGCCGTCTGGTGGCCTGGCCATCTGCTTGAACCGCAAGGATTTTG
ATGTATCGCTGTCAATTGCTCAATTTCTTCTCCCACGGCTTCGAAAATTG
TGTTGGAAATGGTAAATATGTTCTTCCCTGTGCTGTACTTGTTTATGTTT
CTGTTTTGTTTTATGAGAGAGTGTGGTTTCGTCGTTTTTTCTTCGTTTTT
TCTTCGTTCCCCTTACCCCGCCTTCCCTCCGTGTTTCCGAACACGTTATT
CTCTTGGCTGTGTGTCTGGTGACGCCTCTTCCAGGACTACAACAAGTCCC
ACTCCGTCACGGCGATGAAGGCGAACCCCCTCGGTGGCTCTTCCATGGCC
AAGGGCATCGTCTTGGAGAAGATGTAAGTTTTTGCCCCGTCCTCTGTCCC
ATGTCCCCCCCCCGCCCTCTTGGCCGAGGCACACGCGCATTCCTTCTGTT
TGTACAGGATGTTGGCGTTTCTTTTCATTTTTTCAAGAGCAGTTCAAGAA
CGCACGAGCCAGCCCTTGTCCCCAAAAATTACATATTGATTGTAAACAAC
GTGGCCAACGCTAGTTTAGCGTTTACTCTGTCGGCTCGCGCTCGGCATTC
TCTCTGTTTTACTCCAGGGAAGGGTTGGCCAATAGACTCACGGGTAAGGA
TAGCCGAACGTTGTATCGTGTTGAACCGCGTGTGCGCGATGCATGCGGTG
CTTGCAGATGTGGAGTGTGAAGCCCTCATCAATTGTGTTGATGTGTTTTT
TTTTTTACGTGCGCAAGGGCCTTTTGTTGGTTCGAGTTTCCAGTTGGTCG
CATGGAGCTCTCTCCTCAACGGGGTTTGTACAGCTTTGAAGGCTTTCTTG
CGGTCTCGAGTCGTACAGTTGAACGTCTTGAGTTGCAATGTCACGTCAGC
CAGGGTGGGGGGAGGAACTTGGTCAACTTTGCAGGTGTTTGTGCAGTTTA
CAGAGGCTTTGTCACGATCTCGAGTCTTATAGATGCACATCTTGAGCTGT
TATCCACGTCAGGCAGGGCTGTGGTATGAACACGGTCAGCCTTGCAGGTG
TTTGTACCGTTTGTGGAGGCTTTCTCGCCGTCTCGAGCCTTTCACTTTAC
ACATCTTGAGCTGTCACGCCAGGCAGGACGGGGACGGGAATTTGGTCAGC
TTTGCGGTCGGCATCACCTTGTTGATTCAGCCAAGCACTACCGCCTCTGC
TAGCGCCATGCTCCATTAAGAATCAATTTATCGCAAGCCTCGTGGTGTAC
GTTGTCATGTAGGCTTTGGCCTAGATTTCGAAAAAATGGTCGGAATTTTT
CTCTAAAATCCCGAAAAATATGGATCACCGGGGATTTTGTTCGGAATGAA
AACCTAGTTGTATAGTTGAGTGAGAACCTACCGGCATATGCCGTAAGAGA
ACGTCAAATGTAGAAACCGCGCGCAAAAAAAACCTGCCGAGCATACTTGC
GAAAACATGTTGTAGGCATCCCACTATTAATAATAGACAAGGAGACGTTA
TCCGCCAGGGGCTGACGCCAACATCTCGAAACGGCTGAATAAAAAATGCA
AACCGCATATGAACGTGAGAACCGCTGAGAAGCGTCTACCGGCATTACAC
CCCCCCGCAAAAGTTTGTATGGAATACTCGCATGTGTCAAACGTCTAGTC
GAAGCAGCACCAGGTCATCAACACAACTTCACTGGACACGCCAGCCACCC
GTTGTTTAGCGGTCGTAATAACTGCGGTTTCTTCGTGTCCCACCCCTCGT
TCCTTGCTTCGCGTACGCCGCCCGGCCCTGCCTTGCGCTCGCCCCCCTGC
TTTGCCTTGTGCTGCCCCGTTTCTTAATCAATACCCTGTCGGCACGGAAC
AACCATCACATTGACGACTTGTTGTTTTTCCCGGGTATTTCAGCGGTATC
GAAGCGAAACAGCCTAACTCCGCTATCCGGAAGTGCGTGCGGGTGCAGCT
CATCAAGAACGGGAAGAAGCTGGCGGCGTTCGTGCCCCGTGACGGTTGCC
TCAACTTCACCGACGAGAACGTAAGTACTGACCTCGTAGTTATCTTGTTT
TTTTCTCTCGTGTTTTTATATATCAGTTTGCACGAATTTCGGTTTTCGTC
TTGTTGTTTGTGTTTCTGCCTTCCAGGTGTTAACTTTTGTTTTCTTTTTG
TTGTTTTCTGTGTTTTGCTCAGAGCCTGTTTCGTTTTTTTTTTCGCGTTT
GATGATATGCTTCGTAGCGTTAGAAAGTTGTCTTGACGAGGTGTTTGATA
GAAATAGAGGCATGTGTCTTGGGGAGAAGAGCTTTGGTTGCCTCTGCATT
TCCGGCCTTAGAAGCCGAAAGGGGTATGTATGTACGTACCCACCGCTGCG
ATAAATACAGGTAGGCCCTAGTCGAGGGAATCAGGTGGGAGCGTGACAAG
ATTGCTCTACGAAGTCGTCCGGAGTACTATGATGGGGAACCATAGTACAT
AGGGCCAAATATTGTTAGTAATAATCGGGAAATATATAGTTTTTTTGTGT
ACCATAGGTTCTATTTACCATGGTGCTGTTGTACGTTAATTGTGGAGTCA
ATATGTACTAGTGAAACTGTCAGTGACGTCGGTTCCATACCGAACCCATG
GACGGTTCCGCTTTGTTTTGTTTATCGTTTTTTTTTTCATTTTTTTCTTC
TCCCGACTTATTTCTGTACACAAACGTATTCACCCGTCTGTCGCTTCGCT
TTTTACTTTTGGCTTTTTCAGGACGAAGTTCTTATCTCCGGATTCGGACG
CCGCGGTCACGCCGTGGGTGACATCCCCGGTGTCCGCTTCAAGGTCGTCA
AGGTGGCGGGCGTAGCACTGCTCGCCCTCTACAAGGACAAGAAGGAGAAG
CCGCGCTCTTAGAAAAACGCATCGCCTCTCATGCGCAAAACCTATGGGGC
GGGGGTAGGTTTCGGATCAACGAGTTAACGTAGTTCAAGGCTGGGCGCGG
GGGCGAGAAGAAAACAAAGGATTATTTCTTTTCCTTTTTTTTGGTGGCTT
GCTTCTTTTTTGGCCTTCGCATCGAAACAAAGGATTATTTTCTTCTCCTT
TTTTTTTGGTCGTTTGCTTCTTTTTGGCTTTCGCATCGCTTTCGGGTCTC
CCGAATTGGGTACGGTTTGGCTTACCGTTCCGTCTTGAGTACCAGCGTAT
CCCTCCCTCCCCCCCTTCCTCGTCGACGTTTCTCAAGCCTGTTGGCCGTT
TCCGTCCTTCGATGGGCGTAACACGTTGCGAACGGGCTGGGGATTTTGCG
GAGGCGAGGTTGTGCTGGAGATTACCGGTTGTTGTTCGCGGATAAGGGGT
back to topCoding sequence (CDS) from alignment at M-pyrifera_M_contig6658:2957..11606+ >mRNA_M-pyrifera_M_contig6658.16142.1 ID=mRNA_M-pyrifera_M_contig6658.16142.1|Name=mRNA_M-pyrifera_M_contig6658.16142.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=876bp|location=Sequence derived from alignment at M-pyrifera_M_contig6658:2957..11606+ (Macrocystis pyrifera P11B4 male) ATGGGCAAGGGAAAGCCGGCGGGCATCCGCGCGGGGCGCAAGCTCCGCAT CCACCGCCGTAACGAACGGTGGGCGAGCAAGATGGGCAAGGGAAAGCCGG CGGGCATCCGCGCGGGGCGCAAGCTCCGCATCCACCGCCGTAACGAACGG TGGGCGAGCAAGGACTACAACAAGTCCCACTCCGTCACGGCGATGAAGGC GAACCCCCTCGGTGGCTCTTCCATGGCCAAGGGCATCGTCTTGGAGAAGA TGACTACAACAAGTCCCACTCCGTCACGGCGATGAAGGCGAACCCCCTCG GTGGCTCTTCCATGGCCAAGGGCATCGTCTTGGAGAAGATCGGTATCGAA GCGAAACAGCCTAACTCCGCTATCCGGAAGTGCGTGCGGGTGCAGCTCAT CAAGAACGGGAAGAAGCTGGCGGCGTTCGTGCCCCGTGACGGTTGCCTCA ACTTCACCGACGAGAACCGGTATCGAAGCGAAACAGCCTAACTCCGCTAT CCGGAAGTGCGTGCGGGTGCAGCTCATCAAGAACGGGAAGAAGCTGGCGG CGTTCGTGCCCCGTGACGGTTGCCTCAACTTCACCGACGAGAACGACGAA GTTCTTATCTCCGGATTCGGACGCCGCGGTCACGCCGTGGGTGACATCCC CGGTGTCCGCTTCAAGGTCGTCAAGGTGGCGGGCGTAGCACTGCTCGCCC TCTACAAGGACAAGAAGGAGAAGCCGCGCTCTTAGGACGAAGTTCTTATC TCCGGATTCGGACGCCGCGGTCACGCCGTGGGTGACATCCCCGGTGTCCG CTTCAAGGTCGTCAAGGTGGCGGGCGTAGCACTGCTCGCCCTCTACAAGG ACAAGAAGGAGAAGCCGCGCTCTTAG back to top
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