mRNA_M-pyrifera_M_contig66431.16116.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig66431.16116.1 vs. uniprot
Match: F2UQE8_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UQE8_SALR5) HSP 1 Score: 156 bits (395), Expect = 1.130e-39 Identity = 99/280 (35.36%), Postives = 152/280 (54.29%), Query Frame = 1
Query: 1 DVDTVLDR-MRSEWIPAAGVACNSSVEAANHLASLLFASNCTFSDIDYSNRRRADWPVMAHLGRVVELAE-----AGVCGSDAGLVHWSVCALNWWLVERPTDPNWYDQEIAAPNNIGEALVVLGTGALEANQTAA--AEALINEADWRGWTGSNLLFMLRAEAMRGAATGNGTALAEAFSEAFSAVHAFPQSSDGPQHDWSFHQHGPQLLSGSYGAEFVQHVLEMALWASDTQWAMQGASADALEGLVLDGDRHLIR-LQSWDWQVVGRSITVPPG-HT 810
D+ TV R + S IP+ +A S+V N SNCT+SDIDY+++ RADWP H+ RV ++A+ A + L + + CAL+ W +PNW+ +I P +G L++L + + A A+ +++ A W TG+N ++ L + M+G N + +A FS ++AV Q +G Q D SFHQHGP+LL+GSYGA+F +L + ++S T++ M A LVLDG + ++ + DW V+GR IT P G HT
Sbjct: 72 DIATVYRRYVLSLLIPSDKIA--SAVHGYNTFMQHFVPSNCTWSDIDYASKARADWPAGDHMSRVEDMAQLLMTPASPLYRNKTLTNQTTCALHAWTTRDMQNPNWWWNDIGIPQLMGHTLLLLTPDTVPRSSEIAQVAQRIMDRARWWTMTGANRIWELNIKIMQGLFFNNASLVATGFSNVYAAVAFVHQPLEGIQVDGSFHQHGPELLAGSYGADFTATILGLLQFSSGTRFYMDAAHMAVYARLVLDGQQWMVAGHRQQDWSVIGREITRPSGVHT 349
BLAST of mRNA_M-pyrifera_M_contig66431.16116.1 vs. uniprot
Match: A0A818KTQ7_9BILA (Hypothetical protein n=9 Tax=Rotaria TaxID=231623 RepID=A0A818KTQ7_9BILA) HSP 1 Score: 127 bits (319), Expect = 1.550e-29 Identity = 81/252 (32.14%), Postives = 128/252 (50.79%), Query Frame = 1
Query: 79 AANHLASLLFA----SNCTFSDIDYSNRRRADWPVMAHLGRVVELAEA-GVCGS----DAGLVHWSVCALNWWLVERPTDPNWYDQEIAAPNNIGEALVVLGTGALEANQTAAAEALINEADWRG---WTGSNLLFMLRAEAMRGAATGNGTALAEAFSEAFSAVHAFPQSSDGPQHDWSFHQHGPQLLSGSYGAEFVQHVLEMALWASDTQWAMQGASADALEGLVLDGDRHLIRLQSWDWQVVGRSITVP 798
+A LA+L F ++C + DI+Y+++ A+W H+ R+ + +A V GS D+ + + CALN WL+ +PNW+ EI P + L++LG A E A W G TG+NL++M++ E R AT N T + + F+ + V + G Q+DWS+H HG QLLSG+YG + ++ + + TQ+A+ V GD +I WDW V+GR+I+ P
Sbjct: 48 SATVLAALTFTRTLNTSCYWPDINYADKGIAEWFTARHMYRITNMLQALTVNGSTVQNDSQIRKAAHCALNVWLINDWQNPNWWFNEINIPLHATSQLLMLGDDAAHFEIEKIKEISYRSAWWLGSLHHTGANLVWMIQVEIYRSLATNNITGIEQGFTRMWEDVTIVSSNEVGIQYDWSYHFHGSQLLSGTYGMIWAVNIFSFIVCSQKTQYALNEQQLFTFAQFVTKGDAWMIIGDEWDWHVLGRAISRP 299
BLAST of mRNA_M-pyrifera_M_contig66431.16116.1 vs. uniprot
Match: A0A813Y2Y4_ADIRI (Hypothetical protein n=2 Tax=Adineta ricciae TaxID=249248 RepID=A0A813Y2Y4_ADIRI) HSP 1 Score: 125 bits (314), Expect = 7.240e-29 Identity = 75/236 (31.78%), Postives = 118/236 (50.00%), Query Frame = 1
Query: 112 SNCTFSDIDYSNRRRADWPVMAHLGRVVELAEA-----GVCGSDAGLVHWSVCALNWWLVERPTDPNWYDQEIAAPNNIGEALVVLGTGALEANQTAAAEALINEADWRGW-----TGSNLLFMLRAEAMRGAATGNGTALAEAFSEAFSAVHAFPQSSDGPQHDWSFHQHGPQLLSGSYGAEFVQHVLEMALWASDTQWAMQGASADALEGLVLDGDRHLIRLQSWDWQVVGRSI 789
S+C + DI+Y+++ A W HL RV + +A +D + + CALN WL +PNW+ +I P + L++LG+ A A + + +DW W TG+NL++M++ E R AT N T L + F+ + + P G QHDWS+H HG QL+S SYG ++ + L DT++ + +++GD +I WDWQV GR+I
Sbjct: 59 SSCYWKDINYADKTLAVWATEEHLNRVNIMIQALTAPGSTVQNDPRISRGAHCALNVWLARDFLNPNWWFNQIGIPLLVTGQLLMLGSNAT-AYEIEKITQISFRSDW--WEHDPGTGANLIWMVQIELYRSLATNNRTGLEQGFTRMWKDIVVLPLGGQGIQHDWSYHFHGIQLVSASYGQDWALAMTIFILCTKDTEYEVNQEQMTVFARFLVEGDAWMIMDNVWDWQVEGRAI 291
BLAST of mRNA_M-pyrifera_M_contig66431.16116.1 vs. uniprot
Match: A0A815S6K9_9BILA (Hypothetical protein n=6 Tax=Adineta steineri TaxID=433720 RepID=A0A815S6K9_9BILA) HSP 1 Score: 122 bits (305), Expect = 1.140e-27 Identity = 79/237 (33.33%), Postives = 119/237 (50.21%), Query Frame = 1
Query: 112 SNCTFSDIDYSNRRRADWPVMAHLGRVVELAEA-GVCGS----DAGLVHWSVCALNWWLVERPTDPNWYDQEIAAPNNIGEALVVLGTGALEANQTAAAEALINEADW--RGW-TGSNLLFMLRAEAMRGAATGNGTALAEAFSEAFSAVHAFPQSSDGPQHDWSFHQHGPQLLSGSYGAEFVQHVLEMALWASDTQWAMQGASADALEGLVLDGDRHLIRLQSWDWQVVGRSITVP 798
S+C + D++Y ++ W H+ RV + +A V GS D + + CALN WLV+ +PNWY EI P ++ L++LG A E A W RG G+NLL+M++ E R AT N T + + F+ + + SS G Q+DWS+H HG QLLSGSYG + + + + TQ+ + + GD +IR +WD+ V+GR+I P
Sbjct: 63 SSCYWPDVNYYDKGLDTWFTAEHVYRVTTMLQALTVNGSSLKNDPEIRASAHCALNVWLVKDWQNPNWYFNEIRIPLHLTSQLLMLGDNATSFEIEKIEEISYRAAWWLSRGTDVGANLLWMIQIEIYRSLATNNITGIVQGFTRMWQDITFQSASSIGVQYDWSYHFHGRQLLSGSYGMIWAELIFSFVVCTQGTQFVVSDQQLSLFVDFITKGDAWMIRGCNWDFNVIGRAIARP 299
BLAST of mRNA_M-pyrifera_M_contig66431.16116.1 vs. uniprot
Match: A0A815DPP4_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A815DPP4_9BILA) HSP 1 Score: 120 bits (302), Expect = 2.780e-27 Identity = 84/271 (31.00%), Postives = 132/271 (48.71%), Query Frame = 1
Query: 1 DVDTVLDRMRSEWIPAAGVACNSSVEAANHLASLLFASNCTFSDIDYSNRRRADWPVMAHLGRVVELAEA-GVCGS----DAGLVHWSVCALNWWLVERPTDPNWYDQEIAAPNNIGEALVVLGTGALEANQTAAAEALINEADWRGW---TGSNLLFMLRAEAMRGAATGNGTALAEAFSEAFSAVHAFPQSSDGPQHDWSFHQHGPQLLSGSYGAEFVQHVLEMALWASDTQWAMQGASADALEGLVLDGDRHLIRLQSWDWQVVGRSI 789
D+ V R+ I + S+++ A A L S+C +SDI+Y+++ A W V H+ R+ + EA V GS +A L+ CAL+ WL+ +PNW+ +I P L++LG A E A W TG+NL++M++A+ R AT N T L + F ++ + P +DG Q+DWS+H HG QLL+GSYG ++ ++ + + TQ+ + G + +WDW VVGR I
Sbjct: 24 DISIVRQRVLETMIWPTQLNITSTIQNALSYARTL-NSSCYWSDINYADQNVAVWSVADHMARITTMLEALTVPGSTVQNNATLMSSVHCALDVWLINDWQNPNWWFNQINIPIYATSQLLMLGDNATSFEIEKIKEISYRAAWWLHRPQDTGANLVWMIQAQLYRSLATANITGLEQGFRYVWNDIVVVPVRADGVQNDWSYHFHGHQLLTGSYGQTWMNNIFSFLVCSVKTQFEPDANQLLLFSQFLTKGVAWMTIETNWDWHVVGRVI 293
BLAST of mRNA_M-pyrifera_M_contig66431.16116.1 vs. uniprot
Match: A0A818SCV2_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818SCV2_9BILA) HSP 1 Score: 112 bits (280), Expect = 1.350e-24 Identity = 74/250 (29.60%), Postives = 125/250 (50.00%), Query Frame = 1
Query: 64 NSSVEAANHLASLLFASNCTFSDIDYSNRRRADWPVMAHLGRVVELAEA----GVCGSDAGLVHWSV-CALNWWLVERPTDPNWYDQEIAAPNNIGEALVVLGTGALEANQTAAAEALINEADW--RGWTG-SNLLFMLRAEAMRGAATGNGTALAEAFSEAFSAVHAFPQSSDGPQHDWSFHQHGPQLLSGSYGAEFVQHVLEMALWASDTQWAMQGASADALEGLVLDGDRHLIRLQSWDWQVVGRSI 789
N+++ A S L C + D++YS R +W + H+ R+ + A G +D L+ W+V CAL W+ + +PNW+ I P +++LG + + + A + A+W + W G +NL++ L+ + RG AT N +A+A+ F ++ V S+ G Q DWS+H HGPQ+L+G+YG + ++L L TQ+A+ D + +GD W W ++GR I
Sbjct: 10 NATLAQAIGNLSTLDPKTCQWPDLNYSTRGPENWDPVLHMFRISTMTAALTVPGGRENDTVLL-WAVHCALRVWIEQDWQNPNWWWNYIQDPLIATGIMLMLGVERMSSEEINAIITMSYRANWWIKDWGGGANLVWELQVQLYRGLATSNYSAVAQGFEVMWNTVQIQNLSTWGVQTDWSYHFHGPQILTGAYGDAWATNILHFHLATRGTQYALSQDRIDIFGRFLTEGDAWFTMGSVWTWGILGRVI 258
BLAST of mRNA_M-pyrifera_M_contig66431.16116.1 vs. uniprot
Match: A0A815MUR9_9BILA (Hypothetical protein n=4 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A815MUR9_9BILA) HSP 1 Score: 112 bits (280), Expect = 1.890e-24 Identity = 74/250 (29.60%), Postives = 125/250 (50.00%), Query Frame = 1
Query: 64 NSSVEAANHLASLLFASNCTFSDIDYSNRRRADWPVMAHLGRVVELAEA----GVCGSDAGLVHWSV-CALNWWLVERPTDPNWYDQEIAAPNNIGEALVVLGTGALEANQTAAAEALINEADW--RGWTG-SNLLFMLRAEAMRGAATGNGTALAEAFSEAFSAVHAFPQSSDGPQHDWSFHQHGPQLLSGSYGAEFVQHVLEMALWASDTQWAMQGASADALEGLVLDGDRHLIRLQSWDWQVVGRSI 789
N+++ A S L C + D++YS R +W + H+ R+ + A G +D L+ W+V CAL W+ + +PNW+ I P +++LG + + + A + A+W + W G +NL++ L+ + RG AT N +A+A+ F ++ V S+ G Q DWS+H HGPQ+L+G+YG + ++L L TQ+A+ D + +GD W W ++GR I
Sbjct: 10 NATLAQAIGNLSTLDPKTCQWPDLNYSTRGPENWDPVLHMFRISTMTAALTVPGGRENDTVLL-WAVHCALRVWIEQDWQNPNWWWNYIQDPLIATGIMLMLGVERMSSEEINAIITMSYRANWWIKDWGGGANLVWELQVQLYRGLATSNYSAVAQGFEVMWNTVQIQNLSTWGVQTDWSYHFHGPQILTGAYGDAWATNILHFHLATRGTQYALSQDRIDIFGRFLTEGDAWFTMGSVWTWGILGRVI 258
BLAST of mRNA_M-pyrifera_M_contig66431.16116.1 vs. uniprot
Match: A0A818RLG8_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A818RLG8_9BILA) HSP 1 Score: 112 bits (280), Expect = 2.550e-24 Identity = 74/250 (29.60%), Postives = 125/250 (50.00%), Query Frame = 1
Query: 64 NSSVEAANHLASLLFASNCTFSDIDYSNRRRADWPVMAHLGRVVELAEA----GVCGSDAGLVHWSV-CALNWWLVERPTDPNWYDQEIAAPNNIGEALVVLGTGALEANQTAAAEALINEADW--RGWTG-SNLLFMLRAEAMRGAATGNGTALAEAFSEAFSAVHAFPQSSDGPQHDWSFHQHGPQLLSGSYGAEFVQHVLEMALWASDTQWAMQGASADALEGLVLDGDRHLIRLQSWDWQVVGRSI 789
N+++ A S L C + D++YS R +W + H+ R+ + A G +D L+ W+V CAL W+ + +PNW+ I P +++LG + + + A + A+W + W G +NL++ L+ + RG AT N +A+A+ F ++ V S+ G Q DWS+H HGPQ+L+G+YG + ++L L TQ+A+ D + +GD W W ++GR I
Sbjct: 10 NATLAQAIGNLSTLDPKTCQWPDLNYSTRGPENWDPVLHMFRISTMTAALTVPGGRENDTVLL-WAVHCALRVWIEQDWQNPNWWWNYIQDPLIATGIMLMLGVERMSSEEINAIITMSYRANWWIKDWGGGANLVWELQVQLYRGLATSNYSAVAQGFEVMWNTVQIQNLSTWGVQTDWSYHFHGPQILTGAYGDAWATNILHFHLATRGTQYALSQDRIDIFGRFLTEGDAWFTMGSVWTWGILGRVI 258
BLAST of mRNA_M-pyrifera_M_contig66431.16116.1 vs. uniprot
Match: A0A5K7XKY1_9BACT (Uncharacterized protein n=2 Tax=Lacipirellula parvula TaxID=2650471 RepID=A0A5K7XKY1_9BACT) HSP 1 Score: 109 bits (272), Expect = 3.190e-23 Identity = 80/273 (29.30%), Postives = 129/273 (47.25%), Query Frame = 1
Query: 1 DVDTVLDRMRSEWIPAAGVACNSSVEAANHLASLLFASNCTFSDIDYSNRRRADWPVMAHLGRVVELAEAGVCGSDA-----GLVHWSVCALNWWLVERPTDPNWYDQEIAAPNNIGEALVVLGTGALEANQTAAAEALINEADWRGWT----GSNLLFMLRAEAMRGAATGNGTALAEAFSEAFSAVHAFPQSSDGPQHDWSFHQHGPQLLSGSYGAEFVQHVLEMALWASDTQWAMQGASADALEGLVLDGDRHLIRLQSWDWQVVGRSIT 792
D+ TV DR+ ++ + + S N S L A N ++SD++Y ++ R DW M HL R+ +AEA S++ L + A ++W+ P NWY EI+AP +G A+V++ + + + + + L R T G N + A RG G+ + A+AF+ + + +G Q D SFHQHG QL + YG+ F+ V + T +A + AL +LDG + ++R Q D+ GR IT
Sbjct: 49 DLSTVRDRLMADLLSSV-----PSASTVNGYRSSLSA-NGSWSDVNYGSQSRVDWEPMTHLTRLTAMAEAYSSSSNSLYQNTALRDDILKAYDYWISRNPLSDNWYYNEISAPQELGNAMVLINSALSSSRRNSGLDILERAYRSRSSTSLNTGMNRVERATAGISRGIVAGSNSITADAFAAIGDTL--VVTTGEGIQRDGSFHQHGRQLYNQGYGSSFIGGVTQALELNGGTSFAFASDNQRALIDYMLDGTQWMVRGQVVDYTASGREIT 313
BLAST of mRNA_M-pyrifera_M_contig66431.16116.1 vs. uniprot
Match: A0A814LW18_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A814LW18_9BILA) HSP 1 Score: 106 bits (265), Expect = 2.170e-22 Identity = 61/197 (30.96%), Postives = 98/197 (49.75%), Query Frame = 1
Query: 223 SDAGLVHWSVCALNWWLVERPTDPNWYDQEIAAPNNIGEALVVLGTGALEANQTAAAEALINEADWRGW-----TGSNLLFMLRAEAMRGAATGNGTALAEAFSEAFSAVHAFPQSSDGPQHDWSFHQHGPQLLSGSYGAEFVQHVLEMALWASDTQWAMQGASADALEGLVLDGDRHLIRLQSWDWQVVGRSITVP 798
+D L+ CALN WL+ +PNW+ +I P L++LG A + + + + + ADW W TG+NL++ML+ E R AT N T + + F+ + + P G Q DWS+H HG Q+LS SYG ++ ++ + + TQ+ + + +GD + + WDW V+GR I P
Sbjct: 20 NDTTLLSSVHCALNVWLIHDWQNPNWWWNQIGIPLQATSQLLMLGDNATDF-EISMIKNMSYRADW--WYHDPGTGANLVWMLQIELYRSLATDNRTGVEQGFTRMWKDIAVLPLGGQGIQSDWSYHFHGQQILSASYGQDWAIAIIIFVICSDQTQYEIDKQQLSIFATFLTEGDAWMSMGEVWDWSVLGRDIDRP 213 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66431.16116.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig66431.16116.1 >prot_M-pyrifera_M_contig66431.16116.1 ID=prot_M-pyrifera_M_contig66431.16116.1|Name=mRNA_M-pyrifera_M_contig66431.16116.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=262bp MRSEWIPAAGVACNSSVEAANHLASLLFASNCTFSDIDYSNRRRADWPVMback to top mRNA from alignment at M-pyrifera_M_contig66431:15..824- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig66431.16116.1 ID=mRNA_M-pyrifera_M_contig66431.16116.1|Name=mRNA_M-pyrifera_M_contig66431.16116.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=810bp|location=Sequence derived from alignment at M-pyrifera_M_contig66431:15..824- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig66431:15..824- >mRNA_M-pyrifera_M_contig66431.16116.1 ID=mRNA_M-pyrifera_M_contig66431.16116.1|Name=mRNA_M-pyrifera_M_contig66431.16116.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1572bp|location=Sequence derived from alignment at M-pyrifera_M_contig66431:15..824- (Macrocystis pyrifera P11B4 male)back to top |