mRNA_M-pyrifera_M_contig6643.16114.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: D7FX24_ECTSI (Rab8C, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX24_ECTSI) HSP 1 Score: 269 bits (688), Expect = 1.650e-86 Identity = 159/201 (79.10%), Postives = 165/201 (82.09%), Query Frame = 1
Query: 1 TPRRKRTS--GINRERQYDAAVGGG-----GRLSXXXXXXXXXXXXXXXXLSKKTINIVTNLKSHTTGVRSRQEMEELEXXXXXXXXXXXXKENLRQKARGHDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 582
TPRRKRTS GINRERQ+D V GG GR LSKKT+NIVTNLKSHTT VRSR+EME+LEXXXXXXXXXXXX ENLRQK G DFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPT+ISTAGVD+KVQTLDINGKRVRCQIWDTAGQERFHVITR Y RGAHGIAL YDVTDDDSFKNVNYW
Sbjct: 35 TPRRKRTSTSGINRERQFDGTVTGGTGGTGGRFGGGRRRSGPGNGRGG--LSKKTLNIVTNLKSHTTDVRSREEMEDLEXXXXXXXXXXXXXENLRQK--GDDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYW 231
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: A0A6H5JLN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN2_9PHAE) HSP 1 Score: 266 bits (680), Expect = 5.320e-85 Identity = 159/202 (78.71%), Postives = 165/202 (81.68%), Query Frame = 1
Query: 1 TPRRKRTS--GINRERQYDAAVGGGGRLSXXXXXXXXXXXXXXXX------LSKKTINIVTNLKSHTTGVRSRQEMEELEXXXXXXXXXXXXKENLRQKARGHDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 582
TPRRKRTS GINRERQ+D V GG XXXX LSKKT+NIVTNLKSHTT VRSR+EME+LE XXXXXXXXXXKENLRQK G DFD TIRILLLGDSGVGKTSLMTRFSEDKFAPT+ISTAGVD+KVQTLDINGKRVRCQIWDTAGQERFHVITR Y RGAHGIAL YDVTDDDSFKNVNYW
Sbjct: 188 TPRRKRTSTSGINRERQFDGTVTGGTXXXXXXXSRFGRGRRRSGPGNGRGGLSKKTLNIVTNLKSHTTDVRSREEMEDLEEEXXXXXXXXXXKENLRQK--GDDFDRTIRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYW 387
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: A0A836C8W2_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8W2_9STRA) HSP 1 Score: 172 bits (435), Expect = 2.220e-50 Identity = 80/95 (84.21%), Postives = 88/95 (92.63%), Query Frame = 1
Query: 298 TIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 582
TIRILLLGDSGVGKTSLM R++ED F+P ++STAGVDFKV+ LDING+RVRCQIWDTAGQE+FHVITRAY RGAHGIALVYDV D DSFKNVNYW
Sbjct: 2 TIRILLLGDSGVGKTSLMLRYTEDHFSPNLLSTAGVDFKVRHLDINGRRVRCQIWDTAGQEKFHVITRAYYRGAHGIALVYDVADADSFKNVNYW 96
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: A0A7S3PN59_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PN59_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.490e-41 Identity = 90/188 (47.87%), Postives = 112/188 (59.57%), Query Frame = 1
Query: 130 LSKKTINIVTNLKSHT-------TGVRSRQEMEE--LEXXXXXXXXXXXX----------------------------KENLRQKARGHDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 582
LSKKT+NIVTNLK V S++E EE LE +NL K GHD+ +++LLLGDSGVGKTSLM RF++++F +++STAGVDFKV+ L+ + KRV+CQIWDTAGQERFHVITRAY RG+HGIALVYD T + SFK + YW
Sbjct: 80 LSKKTLNIVTNLKDQVESIGIPVNNVLSQEEFEEEALEAEAVAKAATAANPKASDSGKEKKFNYKSGKATRRTSATKISDNL-MKNEGHDY--YVKVLLLGDSGVGKTSLMLRFADNQFQESLMSTAGVDFKVRFLEKDNKRVKCQIWDTAGQERFHVITRAYYRGSHGIALVYDATRESSFKQIEYW 264
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: A0A7S2SPF5_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SPF5_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.100e-40 Identity = 68/102 (66.67%), Postives = 88/102 (86.27%), Query Frame = 1
Query: 286 DFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLD---INGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 582
D+D+ +++LLLGDSGVGKTSLM RF++++F P ++STAGVDFKV+ L+ GKR++CQIWDTAGQERFHVITR Y RG+HGIALVYDVT++ SF+ +NYW
Sbjct: 273 DYDYHVKVLLLGDSGVGKTSLMLRFADNEFQPNLMSTAGVDFKVRYLENQKTKGKRIKCQIWDTAGQERFHVITRTYYRGSHGIALVYDVTNERSFEQINYW 374
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: A0A7R9U6W6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6W6_9STRA) HSP 1 Score: 148 bits (373), Expect = 1.540e-40 Identity = 68/93 (73.12%), Postives = 80/93 (86.02%), Query Frame = 1
Query: 304 RILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 582
R+LLLGDSGVGKTSLM R+SEDKFAP ++STAGVDFK++ + + KRVR QIWDTAGQE+FHVITR++ +GAHGI LVY VTD DSF NV YW
Sbjct: 126 RLLLLGDSGVGKTSLMLRYSEDKFAPVLLSTAGVDFKMRRVVLRNKRVRLQIWDTAGQEKFHVITRSFYKGAHGICLVYSVTDLDSFNNVRYW 218
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: H2ASH5_KAZAF (Uncharacterized protein n=1 Tax=Kazachstania africana (strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 / NBRC 1671 / NRRL Y-8276) TaxID=1071382 RepID=H2ASH5_KAZAF) HSP 1 Score: 144 bits (364), Expect = 3.950e-40 Identity = 63/108 (58.33%), Postives = 86/108 (79.63%), Query Frame = 1
Query: 259 NLRQKARGHDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 582
+L A G ++D ++ILL+GDSGVGK+ L+ RF EDKF+P+ I+T G+DFK++T++INGK+++ Q+WDTAGQERF IT AY RGA GI LVYDVTD+ +F N+N W
Sbjct: 3 HLSASATGKNYDSIMKILLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVEINGKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANINKW 110
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: Q6CNJ5_KLULA (KLLA0E12079p n=4 Tax=Kluyveromyces TaxID=4910 RepID=Q6CNJ5_KLULA) HSP 1 Score: 144 bits (363), Expect = 6.260e-40 Identity = 63/99 (63.64%), Postives = 81/99 (81.82%), Query Frame = 1
Query: 286 DFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 582
++D ++ILLLGDSGVGK+ L+ RF EDKF PT I+T G+DFK++T+DINGKRV+ Q+WDTAGQERF IT AY RGA GI L+YDVTD+ +F+N+ W
Sbjct: 16 NYDSVMKILLLGDSGVGKSCLLVRFVEDKFTPTFITTIGIDFKIKTVDINGKRVKLQLWDTAGQERFRTITTAYYRGAMGIVLIYDVTDERTFENIRQW 114
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: W7U9Z1_9STRA (Rab family gtpase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U9Z1_9STRA) HSP 1 Score: 146 bits (369), Expect = 7.610e-40 Identity = 69/97 (71.13%), Postives = 86/97 (88.66%), Query Frame = 1
Query: 298 TIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQ--TLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 582
+IRILLLGDSGVGKTSLM R+SE++FAP ++STAGVDFKV+ TL+ + ++V+ QIWDTAGQER HVITR Y +G+HGIALVY++TD DSF+NVNYW
Sbjct: 105 SIRILLLGDSGVGKTSLMMRYSENEFAPCLLSTAGVDFKVRHLTLEESKRKVKVQIWDTAGQERMHVITRTYYKGSHGIALVYNLTDPDSFRNVNYW 201
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Match: C1E6E1_MICCC (Ras-related gtp-binding protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E6E1_MICCC) HSP 1 Score: 143 bits (361), Expect = 8.900e-40 Identity = 63/103 (61.17%), Postives = 81/103 (78.64%), Query Frame = 1
Query: 274 ARGHDFDHTIRILLLGDSGVGKTSLMTRFSEDKFAPTMISTAGVDFKVQTLDINGKRVRCQIWDTAGQERFHVITRAYIRGAHGIALVYDVTDDDSFKNVNYW 582
A +DH I++LL+GDSGVGK+ L+ RFSED+F + I+T G+DFK++T++++GKRV+ QIWDTAGQERF IT AY RGAHGI L YDVTD+ SF NV W
Sbjct: 3 AGSQQYDHLIKLLLIGDSGVGKSCLLLRFSEDQFTSSFITTIGIDFKIRTVELDGKRVKLQIWDTAGQERFRTITNAYYRGAHGILLTYDVTDEGSFNNVRNW 105 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6643.16114.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6643.16114.1 >prot_M-pyrifera_M_contig6643.16114.1 ID=prot_M-pyrifera_M_contig6643.16114.1|Name=mRNA_M-pyrifera_M_contig6643.16114.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=194bp TPRRKRTSGINRERQYDAAVGGGGRLSGGSGRRRAGPGNGRGGLSKKTINback to top mRNA from alignment at M-pyrifera_M_contig6643:165..6350- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6643.16114.1 ID=mRNA_M-pyrifera_M_contig6643.16114.1|Name=mRNA_M-pyrifera_M_contig6643.16114.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6186bp|location=Sequence derived from alignment at M-pyrifera_M_contig6643:165..6350- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6643:165..6350- >mRNA_M-pyrifera_M_contig6643.16114.1 ID=mRNA_M-pyrifera_M_contig6643.16114.1|Name=mRNA_M-pyrifera_M_contig6643.16114.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1164bp|location=Sequence derived from alignment at M-pyrifera_M_contig6643:165..6350- (Macrocystis pyrifera P11B4 male)back to top |