mRNA_M-pyrifera_M_contig66162.16060.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8EP52_CAFRO (Uncharacterized protein n=5 Tax=Sar TaxID=2698737 RepID=A0A5A8EP52_CAFRO) HSP 1 Score: 176 bits (446), Expect = 3.210e-46 Identity = 96/261 (36.78%), Postives = 150/261 (57.47%), Query Frame = 1
Query: 19 VLDFFQMAAFPLSISKGMPWGGTPI-EVVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACPNPQS----WFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQSFTGTQ 786
++D Q+ AF ++ S PWG PI V+ GL+F++ AD+ G F+VLL +A AW V+F+A+ +G F+ Q+ ++LR R ++ LST+ LFLP+S +LFRA AC S W GT +C+ RV + + + L +F+ L+ +V A F+DR+P S++W+A HGRV + ++V+KL L+ ++N +L G +T +IVAG WY + L MI N + AATF W + + AQ G+
Sbjct: 68 LVDTLQLVAFSVNTSPNQPWGAFPIGSVISQGLAFLTPDSADITFGPVAFQVLLALAAAWAVIFVAMAAVIGCAFVQERKQSGLLLRSFRAVAALSTSALFLPISSLLFRAFACDAGSSATGGWLGTSMRCNDPVRVGVLVAIAIVLALFAVLAGFVTATFIDREPASSTWTARLHGRVDLAMLVLKLALTAVYNLSPADLVGDPVVTVALIVAGLAWYATIFRELYMINSAGNVIVGASAATFLWSAMVLGFAQLAPGSD 328
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A813D533_9DINO (TmcB protein n=5 Tax=Sar TaxID=2698737 RepID=A0A813D533_9DINO) HSP 1 Score: 162 bits (410), Expect = 2.050e-41 Identity = 96/262 (36.64%), Postives = 147/262 (56.11%), Query Frame = 1
Query: 19 VLDFFQMAAFPLSISKGMPW-GGTPIEVVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACPN--PQSWFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQS-----FTG 780
V+D QM AF S S+ PW + + L F++ AD GL ++V+ +AT W +F+AL +++G F++++ Q+ VLR+ R I+ LS + LFLP++ VL RA AC P W+GT C S R+V ++L L++F +S++V A FVDR+P S +W+A +HGRV +GL++ K +L+ + N + + G LTG +I AG +W+ V L P N + A TF W +A AQ FTG
Sbjct: 114 VIDTAQMLAFVFSASQLHPWHSAEATDGLSQALVFVTPDSADKTFGLLAYQVMFILATVWATLFVALAVQIGRAFVLDSMQSPTVLRVFRAIASLSVSVLFLPVASVLLRAFACDASAPLGWYGT--SCGSPVRIVATVILAVLLMLFLGVSVFVTATFVDREPGSLTWTAKAHGRVDVGLLLFKFLLTAVVN-IDPSTVGSPLLTGFLIAAGVVWFSAVFRELPHSNPMGNAMAGASAMTFLWATATLAFAQGSPTSDFTG 372
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8CR55_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CR55_CAFRO) HSP 1 Score: 153 bits (387), Expect = 2.390e-38 Identity = 100/276 (36.23%), Postives = 150/276 (54.35%), Query Frame = 1
Query: 34 QMAAFPLSISKGMPWGGTPIE--VVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACPNPQS-------WFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQSFTGTQVWVLVVGATPFVLIVG 834
QM AFP S S+ + W GT + VV L+ + AD+ G V++V+ + AWV++F++L + + F+ Q+E LRL RG+++LSTT LFLP+S +LFR+ C S W G G CD+ R+V V+ L++F L+ +VAA FVDR P S W+A SHGRV + L+V K++L+ ++N +G T +IV W + L M+ P N L+AG AA F W + + +AQ + ++ V A P I G
Sbjct: 62 QMLAFPFSASQHI-WDGTVVRNFVVPM-LTVVMPASADVWFGPMVYRVMFFLGIAWVLIFVSLSVSIAVAFIREQKQSEFALRLFRGVAVLSTTALFLPVSSLLFRSYTCDAGSSVKGSTNDWLGAGIPCDNVWRMVGLGVVAVLLVLFFVLASFVAATFVDRRPGSLRWAAKSHGRVAVALLVAKVVLTAIYNVSPVTARGVG-TTVTLIVVALGWLVSLYRELPMLRPVANALRAGSAAAFLWASLSLLVAQLMPENNISIVAVMAVPVAAIAG 334
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8DI18_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DI18_CAFRO) HSP 1 Score: 146 bits (369), Expect = 6.170e-37 Identity = 95/285 (33.33%), Postives = 150/285 (52.63%), Query Frame = 1
Query: 4 FLFLLVLDFFQMAAFPLSISKGMPWGGTPI-EVVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACP-------NPQSWFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQSFTGTQVWVLVVGATPFVLIVG 834
F+ V++ QM AFP S S+ + W T I G L+ + D+ G ++V+ + AWV++F++L + + F+ Q+E LRL RG+++LSTT LFLP+S +LFR+ +C + W G G CD+ R++ V+ L++F L+++VAA FVDR P S W+A SHGRV I L+V K+IL+ ++N + ++I A W + L M+ P N L+AG A F W + + +A G V V+ + P + G
Sbjct: 52 FILATVIEAGQMLAFPFSASQTV-WRDTVIGNAAGPVLTVVMPASLDVWFGPMAYRVMFFLGIAWVLIFISLSVSIAAAFIREKKQSEFALRLFRGVAVLSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMICLGVVAVLLVLFFILAMFVAATFVDRHPGSLRWAAKSHGRVAIALLVAKVILTAIYNVSPAAARSLGTCIALIITALG-WLVALYRELPMLRPVANALRAGSATAFLWASVALLVAMMMPGHDVSVMTLLGIPVAALAG 334
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8EE20_CAFRO (Uncharacterized protein n=8 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EE20_CAFRO) HSP 1 Score: 147 bits (370), Expect = 4.360e-36 Identity = 95/285 (33.33%), Postives = 150/285 (52.63%), Query Frame = 1
Query: 4 FLFLLVLDFFQMAAFPLSISKGMPWGGTPI-EVVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACP-------NPQSWFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQSFTGTQVWVLVVGATPFVLIVG 834
F+ V++ QM AFP S S+ + W T I G L+ + D+ G ++V+ + AWV++F++L + + F+ Q+E LRL RG+++LSTT LFLP+S +LFR+ +C + W G G CD+ R++ V+ L++F L+++VAA FVDR P S W+A SHGRV I L+V K+IL+ ++N + ++I A W + L M+ P N L+AG A F W + + +A G V V+ + P + G
Sbjct: 52 FILATVIEAGQMLAFPFSASQTV-WRDTVIGNAAGPVLTVVMPASLDVWFGPMAYRVMFFLGIAWVLIFISLSVSIAAAFIREKKQSEFALRLFRGVAVLSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMICLGVVAVLLVLFFILAMFVAATFVDRHPGSLRWAAKSHGRVAIALLVAKVILTAIYNVSPAAARSLGTCIALIITALG-WLVALYRELPMLRPVANALRAGSATAFLWASVALLVAMMMPGHDVSVMTLVGIPVAALAG 334
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8EE84_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EE84_CAFRO) HSP 1 Score: 145 bits (367), Expect = 9.290e-36 Identity = 92/252 (36.51%), Postives = 139/252 (55.16%), Query Frame = 1
Query: 37 MAAFPLSISKGMPWGGTPI-EVVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACPNPQS-------WFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQ 768
M AFP S + + W GT I +V L+ + AD+ G ++V+ + AWV++F++L + + F+ Q+E LRL RG+++LSTT LFLP+S +LFR+ C S W G G CD+ R+V V+ L++F L+ +VAA FVDR P S W+A SHGRV + L+V K++L+ ++N +G T +IV W + L M+ P N L+AG AA F W + + +AQ
Sbjct: 1 MLAFPFSAVQHI-WNGTIIGSIVSPLLTVVMPASADIWFGPVFYQVMFFLGIAWVLIFVSLSVSIAVAFIREQKQSEFALRLFRGVAVLSTTALFLPVSSLLFRSYTCDAGSSVKGSTTDWLGAGIPCDNVWRMVGLGVVAVLLVLFFVLASFVAATFVDRRPGSLRWAAKSHGRVAVALLVAKVVLTAIYNVSPVTARGVG-TTVTLIVVALGWLVSLYRELPMLRPVANALRAGSAAAFLWANVMLLVAQ 250
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8D262_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D262_CAFRO) HSP 1 Score: 145 bits (366), Expect = 1.490e-35 Identity = 93/270 (34.44%), Postives = 146/270 (54.07%), Query Frame = 1
Query: 19 VLDFFQMAAFPLSISKGMPWGGTPI-EVVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACP-------NPQSWFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQSFTGTQVWVLVV 804
V++ QM AFP S S+ + W T I G L+ + D+ G ++V+ + AWV++F++L + + F+ Q+E LRL RG+++LSTT LFLP+S +LFR+ +C + W G G CD+ R++ V+ L++F L+++VAA FVDR P S W+A SHGRV I L+V K+IL+ ++N + ++I A W + L M+ P N L+AG A F W + + +A+ G V V+ V
Sbjct: 93 VIEAGQMLAFPFSASQTV-WRDTVIGNAAGPVLTVVMPASLDVWFGPMAYRVMFFLGIAWVLIFISLSVSIAVAFIREKKQSEFALRLFRGVAVLSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMICLGVVAVLLVLFFILAMFVAATFVDRHPGSLRWAAKSHGRVAIALLVAKVILTAIYNVSPAAARSLGTCIALIITALG-WLVALYRELPMLRPVANALRAGSATAFLWASVALLVAELMPGHDVSVMAV 360
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8ECD4_CAFRO (Uncharacterized protein n=6 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8ECD4_CAFRO) HSP 1 Score: 145 bits (365), Expect = 2.030e-35 Identity = 94/285 (32.98%), Postives = 151/285 (52.98%), Query Frame = 1
Query: 4 FLFLLVLDFFQMAAFPLSISKGMPWGGTPIEVVGFG-LSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACP-------NPQSWFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQSFTGTQVWVLVVGATPFVLIVG 834
F+ V++ QM AFP S + + W GT I L+ + DL G ++V+ + AWV++F++L + + F+ Q+E LRL RG+++LSTT LFLP+S +LFR+ +C + W G G CD+ R+V+ V+ L++F L+++VAA FV+R P S W+A SHGRV I L+V K++L+ +FN + +++VA W + L M+ P N L+AG A F W + + ++ G V V+ + P + G
Sbjct: 52 FILATVIEAGQMLAFPFSAVQTV-WQGTIIRSAALPVLTVVMPASLDLWFGPAAYQVMFFLGIAWVLIFISLSVSIAVAFIREKKQSEFALRLFRGVAVLSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMVVLGVVAVMLLLFFILAMFVAATFVNRHPGSLRWAAKSHGRVAIALLVAKVLLTAIFNVSPAAARSLGTCIALIVVALG-WLVALYRELPMLRPVANALRAGSATAFLWASVALLVSNLMPGHDVSVMTLLGIPVAALAG 334
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8CQH5_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CQH5_CAFRO) HSP 1 Score: 143 bits (361), Expect = 6.920e-35 Identity = 89/261 (34.10%), Postives = 144/261 (55.17%), Query Frame = 1
Query: 19 VLDFFQMAAFPLSISKGMPWGGTPI-EVVGFGLSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACPNPQS-------WFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFN---TLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQ 768
V++ QM AFP S ++ + W T + +V L+ + AD+ G ++V+ + AWV++F++L + + F+ Q+E LRL RG+++LSTT LFLP+S +LFR+ +C S W G G CD+ R+++ + L +F L+ +VAA FVDR P S W+A SHGRV + L++ K++L+ ++N T ++ T +IV W + L M+ P N L+AG AA F W + + +AQ
Sbjct: 57 VIEAGQMLAFPFSATQRI-WDNTVVGSIVAPMLTVVMPASADVWFGPMAYQVMFFLGIAWVLIFISLSISIAVAFIREKKQSEFALRLFRGVAVLSTTALFLPVSSLLFRSYSCSAGSSVKGSTNDWLGAGIPCDNEWRLIILGFVAVLLALFFILATFVAATFVDRRPGSLRWAAKSHGRVAVALLMAKVVLTAIYNVSPTAARSIGT----TVTLIVVALGWLVSLYRELPMLRPVANALRAGSAAAFLWANVMLLVAQ 312
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Match: A0A5A8DZS9_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DZS9_CAFRO) HSP 1 Score: 142 bits (357), Expect = 2.190e-34 Identity = 91/274 (33.21%), Postives = 145/274 (52.92%), Query Frame = 1
Query: 37 MAAFPLSISKGMPWGGTPIEVVGFG-LSFISTGVADLVGGLTVFKVLLGVATAWVVVFLALVLRVGHNFLVNAPQNEVVLRLLRGISLLSTTTLFLPLSGVLFRALACP-------NPQSWFGTGWQCDSGARVVLAIVLGCTLIIFSSLSLWVAAVFVDRDPTSTSWSAMSHGRVHIGLIVIKLILSFLFNTLGENLQGHWFLTGVMIVAGAIWYWQVVSRLVMITPWVNHLQAGFAATFTWLGICVALAQSFTGTQVWVLVVGATPFVLIVG 834
M AFP S + + W GT I L+ + DL G ++V+ + AWV++F++L + + F+ Q+E LRL RG+++LSTT LFLP+S +LFR+ +C + W G G CD+ R+V+ V+ L++F L+++VAA FV+R P S W+A SHGRV I L+V K++L+ +FN + +++VA W + L M+ P N L+AG A F W + + ++ G V V+ + P + G
Sbjct: 1 MLAFPFSAVQTV-WQGTIIRSAALPVLTVVMPASLDLWFGPAAYQVMFFLGIAWVLIFISLSVSIAVAFIREKKQSEFALRLFRGVAVLSTTVLFLPVSSLLFRSYSCSAGSDISGSTDDWLGAGIPCDNVWRMVVLGVVAVMLLLFFILAMFVAATFVNRHPGSLRWAAKSHGRVAIALLVAKVLLTAIFNVSPAAARSLGTCIALIVVALG-WLVALYRELPMLRPVANALRAGSATAFLWASVALLVSNLMPGHDVSVMTLLGIPVAALAG 272 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66162.16060.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig66162.16060.1 >prot_M-pyrifera_M_contig66162.16060.1 ID=prot_M-pyrifera_M_contig66162.16060.1|Name=mRNA_M-pyrifera_M_contig66162.16060.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=280bp MFLFLLVLDFFQMAAFPLSISKGMPWGGTPIEVVGFGLSFISTGVADLVGback to top mRNA from alignment at M-pyrifera_M_contig66162:445..1284- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig66162.16060.1 ID=mRNA_M-pyrifera_M_contig66162.16060.1|Name=mRNA_M-pyrifera_M_contig66162.16060.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=840bp|location=Sequence derived from alignment at M-pyrifera_M_contig66162:445..1284- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig66162:445..1284- >mRNA_M-pyrifera_M_contig66162.16060.1 ID=mRNA_M-pyrifera_M_contig66162.16060.1|Name=mRNA_M-pyrifera_M_contig66162.16060.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1680bp|location=Sequence derived from alignment at M-pyrifera_M_contig66162:445..1284- (Macrocystis pyrifera P11B4 male)back to top |