mRNA_M-pyrifera_M_contig66134.16055.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig66134.16055.1
Unique NamemRNA_M-pyrifera_M_contig66134.16055.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig66134.16055.1 vs. uniprot
Match: A0A7S1G6C8_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6C8_9STRA)

HSP 1 Score: 146 bits (368), Expect = 1.570e-35
Identity = 129/415 (31.08%), Postives = 195/415 (46.99%), Query Frame = 1
Query:   13 EFLVGGEILRGAIGDCVRRREELSVEEVVEVEYFPALPPPEEGPSRDGPDWVSSIGASESLAVAGFFDGTLLMHRLEGGELEERAFVGVRAHMRSIGAVSVGSGVGVDKQVVVTGGKDCVVKCW----------------TVLDDIECVGIGAGHEGSITTAAIAPGLQAAATGAWDGGLCVWSL-PDVTESKPQTRSGRRRRKSGXXXXXXXXXXXXXXXXGVAELKMEWEEKSLLVGAITGLVWRGAEELVTGAMDHSVRLWEVKEDGGWASSSARHAHAAVLDVTLAPSHSVVASAHSDELVRIWDFRTHASSXXXXXXXXXXXTTSTPVLTLRGAKSWVTRVKWSPEREHVLASTAQDGRVLLWDTRSPSLPLHTATKHDGKALALAFPTDA-------LILSGGEDRTIR 1185
            +FLV G  LR ++   +RR + +S E +V +EY PA   P++      PDWV ++ A+     +G +DG+  ++   G   E  A VG  AH R I  VSV   V     V+ T  KD  +  +                 +   + CVG    H  S+   A+ P      +G+WDG +C+WS  P+ + +      G       XXXXXXXXXXXX     VA L    E       A+T +VW     L +G+ DHSVR+W++   G    S   H +  V  + ++P+ + +A+AH D ++R+WD R   ++                 + LRG ++WVT V W+P  + +LAST+           + S PLHT   HD KALA+A+   A        ++SGG D+ +R
Sbjct:   70 DFLVDGRFLRTSLAKFLRR-QGMSGESIVTLEYAPAFRAPKQDLEMPHPDWVGAVDATPRFIASGCYDGSARLYNAAG---EVVATVG-SAHKRPIRGVSVSEAVDGYDVVLATAAKDGTLALFGGTAXXXXXXXXXXDVRLQQLLSCVG----HTNSVDAVAVDPVGSKLVSGSWDGTMCLWSTDPEASPAAGGDEEGEAXXXXXXXXXXXXXXXXXSAPKRVAPLATAKEHNQ----AVTSVVWPSPLVLASGSHDHSVRIWDMGR-GELEVSQTLHGNKVVTGLAVSPNGASLATAHPDRVIRLWDPRASGATVVQ--------------MALRGHEAWVTGVAWAPFTDFLLASTSHXXXXXXXXXXA-SRPLHTMGAHDDKALAVAWQAGADGGADGAFVVSGGADKKVR 455          
BLAST of mRNA_M-pyrifera_M_contig66134.16055.1 vs. uniprot
Match: A0A7S3Q0R3_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0R3_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.690e-35
Identity = 125/410 (30.49%), Postives = 194/410 (47.32%), Query Frame = 1
Query:    1 SLRLEFLVGGEILRGAIGDCVRRREELSVEEVVEVEYFPALPPPEE-GPSRDGPDWVSSIGASESLAVAGFFDGTLLMHRL--EGGELEERAFVGVRAHMRSIGAVSVG-SGVGVDKQVVVTGGKDCVVKCWTVLDD----IECVGIGAGHEGSITTAAIAPGLQAA--ATGAWDGGLCVWSLPDVTESKPQTRSGRRRRKSGXXXXXXXXXXXXXXXXGVAELKMEWEEKSLLVGAITGLVW--RGAEELVTGAMDHSVRLWEVKEDGGWASSSARHAHAAVLDVTLAPSHSVVASAHSDELVRIWDFRTHASSXXXXXXXXXXXTTSTPVLTLRGA-KSWVTRVKWSPEREHVLASTAQDGRVLLWDTRSPSLPLHTATKH--DGKALALAFPTDALILSGGEDRTIR 1185
            ++  +FL+  ++LR ++ +   RRE LS+E+ VE++YFPA   PEE G S   P+W+S++ +S  L   G  DG++ +     E G L +   V  +AH   I  +S   S   VD  +V TG  D  +   +        +  V  G GH  SI +  +         A+G WDGGLC+W +P  T    + R  RR+  S                  V E    +  K+     I+G+ W    +  ++T + DHS++ W+V+      + +       V  +    +  VVA+ H D  VR+WD R+ + +                  TLR + +SW++ V+WSP    V+AST+ DG V +WD RS S+PLHT   H    KAL L+F T+  I SGG D  ++
Sbjct:   83 AIPFDFLLNNKLLRMSV-EAAARREGLSLEQAVEIQYFPARQAPEEEGESESLPEWISAMSSSSDLLWTGNCDGSIRLFSPANEKGSLIQTDVV--KAHSGPIKCLSSSTSHDNVDSTIVATGSMDQTLLTHSYETGGKLVLHTVYTG-GHTSSINSVRLLCDKSGVTMASGDWDGGLCIWKVPSDTNESAKPREKRRKGSSDAND-------------AVREASPFYCFKAHS-NNISGISWSSESSNTIITSSWDHSIKTWDVESQNNILTLNGSKV---VTALGRCHNSDVVATGHPDCTVRLWDMRSSSKNEGNVFDN-----------TLRPSHRSWISAVEWSPVDPFVMASTSHDGSVKVWDIRS-SVPLHTIKAHAKGSKALCLSF-TEKAIFSGGSDCIVK 458          
BLAST of mRNA_M-pyrifera_M_contig66134.16055.1 vs. uniprot
Match: A0A6I9WRU0_9HYME (Ribosome biogenesis protein WDR12 homolog n=2 Tax=Pogonomyrmex barbatus TaxID=144034 RepID=A0A6I9WRU0_9HYME)

HSP 1 Score: 137 bits (346), Expect = 7.760e-33
Identity = 108/403 (26.80%), Postives = 177/403 (43.92%), Query Frame = 1
Query:    1 SLRLEFLVGGEILRGAIGDCVRRREELSVEEVVEVEYFPALPPPEEGPSRDGPDWVSSIGASESLAVAGFFDGTLLMHRLEGGELEERAFVGVRAHMRSIGAVSVGSGVGVDKQVVVTGGKD--CVVKCWTVL-DDIECVGIGAGHEGSITTAAIAPGLQAAATGAWDGGLCVWSLPDVTESKPQTRSGRRRRKSGXXXXXXXXXXXXXXXXGVAELKMEWEEKSLLVGAITGLVWRGAEELVTGAMDHSVRLWEVKEDGGWASSSARHAHAAVLDVTLAPSHSVVASAHSDELVRIWDFRTHASSXXXXXXXXXXXTTSTPVLTLRGAK-----SWVTRVKWSPEREHVLASTAQDGRVLLWDTRSPSLPLHTATKHDGKALALAFPTDALILSGGEDRTIR 1185
             +  +FLV  + LR ++ D +  +  +  E +++VEY    P PE        DWVS+I   E   + G +D  + +  L+G  L +    G RA ++++  + +     V      +   D  C++  W +  + +EC+ +  GH  SI    I       ATG WD  L +WSL    +++  +    +   +                    +  M+  ++     AI+G++W G  E++TG+ DH++++W+  E GG       H      D+  +P    V +  +D+ VR++D R+                      T+  AK      WV  V W+PE EH+  S A D  V LWDTRSP +PL     H+ K L   +  D LILSGG D T+R
Sbjct:   76 QVEFDFLVCSQFLRTSLIDHITEKG-IPFENLIDVEYIEKYPSPEPKDCLIHDDWVSAIAVLEKWILTGSYDNMIHIWTLQGEHLLD--VPGHRAPVKAVAWIYIN----VHNASFASASMDQICMIWNWDMKKNSVECIYVCKGHRRSIEALGINFERTLIATGGWDNMLHLWSLSTQDDNEESSSKKAKLEHANRTK--------------TPKCTMKGHKQ-----AISGIIWSGRMEIITGSWDHTIKIWDT-ELGGIKHEI--HGDKCFFDIDYSPHSRAVIAGSADQHVRLYDPRSTEG-------------------TIAKAKFTSHTQWVAAVHWAPEDEHLFVSGAYDNTVKLWDTRSPKVPLFDLLGHEDKVLVCDWSYDKLILSGGADNTLR 430          
BLAST of mRNA_M-pyrifera_M_contig66134.16055.1 vs. uniprot
Match: UPI0018E53C06 (ribosome biogenesis protein WDR12 homolog n=2 Tax=Coliadinae TaxID=42450 RepID=UPI0018E53C06)

HSP 1 Score: 135 bits (340), Expect = 4.070e-32
Identity = 107/406 (26.35%), Postives = 183/406 (45.07%), Query Frame = 1
Query:    1 SLRLEFLVGGEILRGAIGDCVRRREELSVEEVVEVEYFPALPPPEEGPSRDGPDWVSSIGASESLAVAGFFDGTLLMHRLEGGELEERAFVGVRAHMRSIGAVSVGSGVGVDKQVVVTGGKD--CVVKCWTV-LDDIECVGIGAGHEGSITTAAIAPGLQAAATGAWDGGLCVWS--------LPDVTESKPQTRSGRRRRKSGXXXXXXXXXXXXXXXXGVAELKMEWEEKSLLVGAITGLVWRGAEELVTGAMDHSVRLWEVKEDGGWASSSARHAHAAVLDVTLAPSHSVVASAHSDELVRIWDFRTHASSXXXXXXXXXXXTTSTPVLTLRGAKSWVTRVKWSPEREHVLASTAQDGRVLLWDTRSPSLPLHTATKHDGKALALAFPTDALILSGGEDRTIR 1185
            ++  +FLV GE+LR ++ + ++ R  +S EE +E+EY    P P         DWVS++    +  ++G +D +L +   +G    + A  G  + ++++  VS       D+ V  +G  D   ++  W V  + ++CV    GH+  +   A++   +  ATG+WD  +C+WS        +P   +SKP+  S R                       +  LK   E       A++G+ W     +V+   DH ++LW+  E GG     A   + A  D+  +P ++ + +A +D  VR++D R+  S                   T      WV  V+WS   + +  S   DG+V LW+TRSP  PL+  T H+ K L   +   AL++SG  D T+R
Sbjct:   58 AIDFDFLVCGELLRTSVSEHLQERS-VSTEETLEIEYIERFPAPSPQDCLMHDDWVSAVDTHGNWILSGSYDNSLHIWTSKGQH--KLAIPGHTSPVKAVAWVSFNG----DQAVFASGSHDQSAMLWVWNVSTNSVDCVVTFRGHDKGVECLAVSADAKRLATGSWDTNVCLWSASLSDEDNVPSKKKSKPEQGSSRE---------------------PLTTLKGHRE-------AVSGIKWIDFNTVVSSGWDHLIKLWDC-ELGGIKQDIA--GNKAFFDLDWSPLNNSIIAASADRHVRLYDPRSSESLVKT---------------TYTSHTGWVQAVRWSTTSDTMFLSAGYDGKVKLWETRSPKTPLYDLTGHEDKVLCCNWSNPALLVSGACDNTLR 410          
BLAST of mRNA_M-pyrifera_M_contig66134.16055.1 vs. uniprot
Match: WDR12_CHLRE (Ribosome biogenesis protein WDR12 homolog n=4 Tax=Chlamydomonas TaxID=3052 RepID=WDR12_CHLRE)

HSP 1 Score: 135 bits (341), Expect = 4.210e-32
Identity = 125/419 (29.83%), Postives = 189/419 (45.11%), Query Frame = 1
Query:   13 EFLVGGEILRGAIGDCVRRREELSVEEVVEVEYFPALPPPEEGPSRDGPDWVSSI------------GASESLAVAGFFDGTLLMHRLEGGELEERAFVGVRAHMRSIGAVSVGSGVGVDKQVVVTGGKDCVVKCWTVLDDIE--------CVGIGAGHEGSITTAAIAPGLQAAATGAWDGGLCVWSLPDVTESKPQT-RSGRRRRKSGXXXXXXXXXXXXXXXXGVAELKMEWEEKSLLVGAITGLVWRGAEELVTGAMDHSVRLWEVKEDGGWASSSARHAHAAVLDVTLAPSHSVVASAHSDELVRIWDFRTHASSXXXXXXXXXXXTTSTPVLTLRGAKS-WVTRVKWSPEREHVLASTAQDGRVLLWDTRSPSLPLHTATKHDGKALALAFPTDAL------ILSGGEDRTIR 1185
            +FL+ GE++R ++   +     LS E  +EVEY PA+ PP++  S    DWVSS+            G+   + V+G +DG L   RL  G+LE  A   V AH   +  V        D  +++T GKD +VK W +    E         V    GHE  +   A +P  +  A+  WDG L VW   +       T  + +++RK+G    XXX         G A+L+         +  ++ + W     L +G  DHSVR W+V    G A+ +   + A +   + A S ++VA   SD  +R+WD R  A S                 +T +GA   WVT V W P  +H +AS + DG + +WD R+  +PL   + H  K LAL +   A       ++SGG D  +R
Sbjct:   54 DFLIDGELVRKSLEQHLLAHN-LSAESTLEVEYVPAVVPPQQKNSTPHDDWVSSVDGSRCAPASSSGGSPSGVVVSGSYDGLL---RLWNGDLE--AVASVSAHAGGVNCVRFLPKSQGD--LLLTSGKDRLVKMWQLSSSEEEDAGPSCRLVATYRGHEDGVEAVAASPSGRRFASCGWDGKLLVWEGGEQLRWAAGTAEASKKKRKTGTANGXXXAGA------GGADLRGH-------LHCVSSVAWPAENSLFSGGWDHSVRRWDVSS--GAAADTYNGSKAVLCIASHAASPALVAFGCSDRALRLWDTRGKAGSDAL-------------AVTTQGAHGGWVTAVAWCPSSQHHIASASHDGTIKMWDIRT-QIPLGMLSHHTDKVLALGWLGGAEAGHARGLVSGGADCQLR 435          
BLAST of mRNA_M-pyrifera_M_contig66134.16055.1 vs. uniprot
Match: A0A1X2I4D5_9FUNG (Ribosome biogenesis protein YTM1 n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2I4D5_9FUNG)

HSP 1 Score: 130 bits (326), Expect = 3.470e-30
Identity = 110/411 (26.76%), Postives = 186/411 (45.26%), Query Frame = 1
Query:   13 EFLVGGEILRGAIGDCVRRREELSVEEVVEVEYFPALPPPEEGPSRDGPDWVSSIGASESLAVAGFFDGTLLMHRLEGGELEERAFVGVRAHMRSIGAVSVGSGVGVDKQVVVTGGKDCVVKCWTVLDD-----IECVGIGAGHEGSITTAAIAPGLQAAATGAWDGGLCVWS--LPDVTESKPQTRSGRRRRKSGXXXXXXXXXXXXXXXXGVAELKMEWEEKSLL-----------VGAITGLVWRGAEELV--TGAMDHSVRLWEVKEDGGWASSSARHAHAAVLDVTLAPSHSVVASAHSDELVRIWDFRTHASSXXXXXXXXXXXTTSTPVLTLRGAKSWVTRVKWSPEREHVLASTAQDGRVLLWDTRSPSLPLHTATKHDG-KALALAFPTDALILSGGEDRTI 1182
            EFL+ GEILR +I D +   ++LS E +V +EY  ++ PP    S    DW+SS+   ES  + G +D  + +     GE           H  ++ +V  G     +  ++ + G D     W V DD      EC G    HE +I + A+       AT + D  + +W+  +P   E+  +  + +++R++                          E+KS L           VGA+  + +  A+  +  +G  DHS+R W++++     +++ ++    VLDV  +    ++A+ H+D LVR+WD R+                     L LRG K WV+ V W+P   + L S + DG + +WD RS   P++T  + D  K LA+ +  D +I SGGED+ +
Sbjct:   54 EFLIDGEILRASIADYLTG-QQLSTENLVTIEYMESMLPPTPLTSYQHDDWISSVQGYESFFLTGSYDNMVRLWN-SSGECTNTLI----GHTEAVKSVKFGPSTS-NSMMLFSAGLDHTALAWQVSDDNEELLYECQG----HEAAIESLAVNSTKSHLATASADATIKIWTTNVPSEDEATIKESAPKKKRRT--------------------------EQKSRLTKAQAVTLNGHVGAVNAVDFDSADGNIVYSGGWDHSIRSWDIEQQ---VNTTTKNCEKVVLDVDYSGDARLIATGHTDNLVRLWDPRSEDGVNVK--------------LALRGHKGWVSSVSWAPHSPYSLCSGSYDGSIRIWDIRSKG-PVYTLEEQDHPKVLAVDWCGDRII-SGGEDKKL 408          
BLAST of mRNA_M-pyrifera_M_contig66134.16055.1 vs. uniprot
Match: A0A7S2VYV7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VYV7_9STRA)

HSP 1 Score: 130 bits (327), Expect = 4.830e-30
Identity = 116/408 (28.43%), Postives = 196/408 (48.04%), Query Frame = 1
Query:    1 SLRLEFLVGGEILRGAIGDCVRRREELSVEEVVEVEYFPALPPPE-EGPSRDGPDWVSSIGASES------LAVAGFFDGTLLMHRLEGGELEE-------RAFVGVRAHMRSIGAVSVGSGVGVDKQVVVTGGK-DCVVKCWTVLDD------IECVGIGAGHEGSITTAAIAP----GLQAAATGAWDGGLCVWSLPDVTESKPQTRSGRRRRKSGXXXXXXXXXXXXXXXXGVAELKMEWEEKSLLVGA----ITGLVWRGA--------EELVTGAMDHSVRLWEVKEDGGWASSSARHAHAAVLDVTLAPSHSVVASAHSDELVRIWDFRTHASSXXXXXXXXXXXTTSTPVLTLRGA-KSWVTRVKWSPEREHVLASTAQDGRVLLWDTRSPSLPLHTATKH 1110
            ++  +FL+  ++LR  + +   RRE LS+E+ VE++YFPA  PPE  G S   PDW++S+  +E+      +   G  DG++   RL G  +E+       +     +AH   I  +S       D ++++  G  D  +   T+  D      +  V  G GH  SI++ + +          A+G W+GGLC+W +P   +S     + ++        XXXXX         + EL ++  + +  + A    I+G+VW  A        ++++T + DHS+++W++       + +       V  +    +  VVA+ H D  VR+WD RT+ ++           ++S    TL+ + KSWV+ VKWS    +VLAST+ DG V +WD RS S PL+T   H
Sbjct:   81 AIPFDFLLNNKLLRVGV-ESAARREALSLEQAVEIKYFPAQRPPEGSGESETFPDWITSMSLTENESLREGILCTGGSDGSI---RLFGTTIEDSETPNGLQTIQSTKAHSGPIQCISTAQSDESDNRLLIASGSMDQTLLTHTLARDGKEQLALNAVYTG-GHFSSISSVSFSKKHGHNDMLMASGDWNGGLCLWKVPTANDSDGSDNAPKK--------XXXXXKSQVHVTSSITELSVKEVQPTFTIKAHSSNISGIVWDYASSSTESSEKKIITASWDHSIKVWDINRQESLLTLNGSRV---VTSLGRCHNSDVVATGHPDCTVRLWDMRTNRNANI---------SSSVSDSTLKPSHKSWVSDVKWSQTDPYVLASTSHDGTVKMWDIRS-SQPLYTVRAH 462          
BLAST of mRNA_M-pyrifera_M_contig66134.16055.1 vs. uniprot
Match: B8C562_THAPS (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C562_THAPS)

HSP 1 Score: 128 bits (322), Expect = 3.750e-29
Identity = 129/429 (30.07%), Postives = 194/429 (45.22%), Query Frame = 1
Query:    1 SLRLEFLVGGEILRGAIGDCVRRREELSVEEVVEVEYFPA-LPPPEEGPSRDGPDWVSSI-------GASESLAVAGFFDGTLLMHRLEGGELEERAFVGVRAHMRSIGAVSVGSGVGVDKQVVVTGGKDCVVKCWTVLDD----IECVGIGAGHEGSITTAAI----APGLQAAATGAWDGGLCVWSLP-------DVTESKPQTRSGRRRRKSGXXXXXXXXXXXXXXXXGVAELKMEWEEKSLLVGAITGLVW-----------RGAEELVTGAMDHSVRLWEVKE-DGGWASSSARHAHAAVLDVTLAPSHSVVASAHSDELVRIWDFRTHASSXXXXXXXXXXXTTSTPVLTLRGA-KSWVTRVKWSPEREHVLASTAQDGRVLLWDTRSPSLPLHT--ATKHDGKALALAFPTDALILSGGED 1173
            S+  +FL+   +LR  +   +R+ E L+ E  +E+ YFPA LPP +EG     PDW+  +       G S+ +   G  DG +   +  GG L  ++   + AH   I  +S  +    +K +V TG  D  +   T   D    +  V  G GH  +I++ A+      G    A+G WDGGL +WS+P       D  + +   +S RR+  S                  + E+K     K+     I+GL W                L+TG+ DH +++++    D   A + +R     V  ++   + +VV +   D  VR+WD R+  S                   TLR + K+WV+ V+WSP    VLAST+ DG + +WD RS SLPLHT  A K   KAL LAF T+  I SGG D
Sbjct:   94 SIPFDFLLSQSLLRLPLESAIRK-EGLNTESAIELYYFPARLPPKKEGEGEVVPDWIMGMEFVNGVGGGSDGVLFTGGADGVVRSFQSNGGVL--KSSTSIAAHTGPIHCISAATVN--EKCLVATGSMDQTLVTHTYNHDGSLDLHAVYSG-GHANTISSMALLANGGDGKSIMASGDWDGGLSLWSVPSADGNGVDGGDDRDGKKSKRRKGNSSTDNTTHP---------SIQEVKPTISVKAHSSN-ISGLAWGYNNTSSDSTNSTPSTLLTGSWDHGLKVYDTSRMDCVLALNGSR----VVTSLSRCVNSNVVGTGGPDCTVRLWDMRSGGSVGESVGSGADK--------TLRQSHKAWVSNVQWSPTDPFVLASTSHDGTLKIWDIRS-SLPLHTVNAVKKGEKALCLAFGTE-YIYSGGSD 492          
BLAST of mRNA_M-pyrifera_M_contig66134.16055.1 vs. uniprot
Match: A0A6U3SDZ9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SDZ9_9STRA)

HSP 1 Score: 124 bits (312), Expect = 1.040e-27
Identity = 143/439 (32.57%), Postives = 206/439 (46.92%), Query Frame = 1
Query:    1 SLRLEFLVGGEILRGAIGDCVRRREELSVEEVVEVEYFPALPPPE-EGPSRDGPDWVSSI--------GASESLAVAGFFDGTLLMHRL--EGGELEERAFVGVRAH---MRSIGAVSVGSGVGVDKQVVVTGGKDCVVKCWTVL-----DD-------IECVGIGAGHEGSITTAAI---APGLQAAATGAWDGGLCVWSLPDVT---------ESKPQTRSGRRRRKSGXXXXXXXXXXXXXXXXGVAELK---MEWEEKSLLVGAITGLVWRGAEELVTGAMDHSVRLWEV-KEDGGWASSSARHAHAAVLDVTLAPSHSVVASAHSDELVRIWDFRTHASSXXXXXXXXXXXTTSTPVLTLRGAKSWVTRVKWSPEREHVLASTAQDGRVLLWDTRSPSLPLHT--ATKHDGKALALAFPTDALILSGGEDRTIR 1185
            ++  +FLV   +LR  + +   RRE LS+E  V V+YFPA   PE    S   PDW+S++        G    +   G  DG++  +R   EGG    ++   V AH   ++ + ++++ S V     ++ TG  D  +   T+      DD       +  V  G GH  SI + A+   + G    A+G WDGGLC W +P ++         ++    +         XXXXXXXXXXXX     V E++         S L G   G    G   L+TG+ DHSV++W++ K D     + AR     V  +    +  VVA+ H D  VR+WD RT  ++           T  +  +     KSWV+ V+WSP   +VLAST+ DG V +WD RS SLPLHT  A     K L LA+  D  I SGG D  +R
Sbjct:   97 AIPFDFLVNDRLLRTGV-EAAARREGLSLENAVVVQYFPARKAPEGTDESETLPDWISAMSYEKNSESGVDGGMLFTGVCDGSVSAYRCSKEGGL---KSISTVSAHTGPIKCLSSMTIPSSVSAS-HLIATGSMDQTLVTHTLQSKSKSDDEMKKKLTLHAV-YGGGHFNSIGSVALLRKSDGEAIMASGDWDGGLCFWKIPSLSGGGDGGMNVDNVDAGKKXXXXXXXXXXXXXXXXXXXXEAAISVVEVQPFSTIRAHNSNLSGLSFGYNSSG-NTLLTGSWDHSVKVWDIEKSDCILTLNGAR----VVTSLGRCHNSDVVATGHPDCTVRLWDMRTGMNASNSKQSS----TQVSDSILKPSHKSWVSAVEWSPTDPYVLASTSHDGTVKMWDIRS-SLPLHTIRAQPKGQKGLCLAYG-DGAIYSGGSDCIVR 518          
BLAST of mRNA_M-pyrifera_M_contig66134.16055.1 vs. uniprot
Match: A0A2R5GAP8_9STRA (Ribosome biogenesis protein WDR12 homolog n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GAP8_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.870e-27
Identity = 113/423 (26.71%), Postives = 176/423 (41.61%), Query Frame = 1
Query:   67 RREELSVEEVVEVEYFPALPPPEEGPSRDGPDWVSSIGA-------SESLAVAGFFDGTLLMHRLEGGELEERAFVGV------RAHMRSIGAVSVGSGVGVDKQVVVTGGKDCVVKCWTV--------------------LDDIECVGIGA--GHEGSITT--AAIAPGLQAAATGAWDGGLCVWSLP-----DVTESKPQTRSGRRRRKSGXXXXXXXXXXXXXXXXGVAELKMEWEEKSLLVG---AITGLVW--RGAEE-LVTGAMDHSVRLWEVKEDGGWASSSARHAHAAVLDVTLAPSHSVVASAHSDELVRIWDFRTHASSXXXXXXXXXXXTTSTPVLTLRGAKSWVTRVKWSPEREHVLASTAQDGRVLLWDTRSPSLPLHTATKHDGKALALAFPTDA-LILSGGEDRTIRA 1188
            R  +LS EEV+ +EY PAL  PE       PDW+S + A        + +AV G +DG+L    +           GV      +AH  ++  V+        +  V + GKD VVK W+                        + C  I    GHE S+    A          +G WD  +C+W +      DVT +K +          G                  A      +  S+L G   +++ L W  RG+   L +G+ D S+R W+V  +     +   + +  V  +   P+ + +A+ H+DE VR+WD R    +                 L+L+  ++W+T V+WSP R H+LAS +QD  + LWD RS S+PLHT   H  K   L++     +++S G D  +RA
Sbjct:  130 RTLKLSSEEVLHLEYAPALLEPELSAEEKWPDWLSCVDARRPTAENEDLVAVTGSYDGSLTFCEVARSSGAAGLAKGVTVLSKVQAHRAAVKGVTQ-----FGENYVSSCGKDGVVKVWSTSLAEAAPVTRKAAANGSSSSTRSMNCTQIAGCEGHERSVEALDAVQIGNFAVMGSGGWDQSVCIWKVALGNEDDVTAAKEEGED------EGDAANGSDRKKRKVKGAKAASALKTVKPASVLSGHTDSVSALTWADRGSPSTLFSGSWDRSIRAWDVVRE---VCTIKLNGNKVVTAIAHNPTTATIATGHADEQVRLWDSRVTGEAIVK--------------LSLKSHEAWITSVQWSPSRPHLLASASQDQTIKLWDVRS-SVPLHTLKSHTNKVFGLSWDASGTMLMSAGADSMLRA 523          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66134.16055.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1G6C8_9STRA1.570e-3531.08Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A7S3Q0R3_9STRA1.690e-3530.49Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A6I9WRU0_9HYME7.760e-3326.80Ribosome biogenesis protein WDR12 homolog n=2 Tax=... [more]
UPI0018E53C064.070e-3226.35ribosome biogenesis protein WDR12 homolog n=2 Tax=... [more]
WDR12_CHLRE4.210e-3229.83Ribosome biogenesis protein WDR12 homolog n=4 Tax=... [more]
A0A1X2I4D5_9FUNG3.470e-3026.76Ribosome biogenesis protein YTM1 n=1 Tax=Absidia r... [more]
A0A7S2VYV7_9STRA4.830e-3028.43Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
B8C562_THAPS3.750e-2930.07Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]
A0A6U3SDZ9_9STRA1.040e-2732.57Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A2R5GAP8_9STRA2.870e-2726.71Ribosome biogenesis protein WDR12 homolog n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66134contigM-pyrifera_M_contig66134:51..1253 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArthropoda
Seed ortholog score140.6
Seed ortholog evalue1.6e-30
Seed eggNOG ortholog7234.FBpp0190493
KEGG koko:K14863
Hectar predicted targeting categoryother localisation
GOsGO:0000460,GO:0000463,GO:0000470,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030684,GO:0030686,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0070545,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904
EggNOG free text desc.Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit
EggNOG OGs38BM0@33154,3BDJS@33208,3CVCD@33213,3SH1S@50557,41TUR@6656,44X1H@7147,45N6K@7214,KOG0313@1,KOG0313@2759
COG Functional cat.A
Best tax levelDrosophilidae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons1
Model size1203
Cds size1203
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816550.8325825-CDS-M-pyrifera_M_contig66134:50..12531622816550.8325825-CDS-M-pyrifera_M_contig66134:50..1253Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66134 51..1253 +
1692278041.6124468-CDS-M-pyrifera_M_contig66134:50..12531692278041.6124468-CDS-M-pyrifera_M_contig66134:50..1253Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66134 51..1253 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66134.16055.1prot_M-pyrifera_M_contig66134.16055.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig66134 51..1253 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig66134.16055.1

>prot_M-pyrifera_M_contig66134.16055.1 ID=prot_M-pyrifera_M_contig66134.16055.1|Name=mRNA_M-pyrifera_M_contig66134.16055.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=401bp
SLRLEFLVGGEILRGAIGDCVRRREELSVEEVVEVEYFPALPPPEEGPSR
DGPDWVSSIGASESLAVAGFFDGTLLMHRLEGGELEERAFVGVRAHMRSI
GAVSVGSGVGVDKQVVVTGGKDCVVKCWTVLDDIECVGIGAGHEGSITTA
AIAPGLQAAATGAWDGGLCVWSLPDVTESKPQTRSGRRRRKSGSGEEGGS
GGGEGDGEGGVAELKMEWEEKSLLVGAITGLVWRGAEELVTGAMDHSVRL
WEVKEDGGWASSSARHAHAAVLDVTLAPSHSVVASAHSDELVRIWDFRTH
ASSSSSSSSAAAAPTTSTPVLTLRGAKSWVTRVKWSPEREHVLASTAQDG
RVLLWDTRSPSLPLHTATKHDGKALALAFPTDALILSGGEDRTIRAATIA
*
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mRNA from alignment at M-pyrifera_M_contig66134:51..1253+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig66134.16055.1 ID=mRNA_M-pyrifera_M_contig66134.16055.1|Name=mRNA_M-pyrifera_M_contig66134.16055.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1203bp|location=Sequence derived from alignment at M-pyrifera_M_contig66134:51..1253+ (Macrocystis pyrifera P11B4 male)
TCTTTGCGGTTGGAGTTTCTGGTTGGAGGTGAGATTTTGCGTGGGGCGAT TGGAGATTGCGTGAGGCGACGGGAGGAGTTGTCGGTGGAAGAAGTAGTGG AAGTCGAGTACTTCCCTGCTCTCCCCCCACCGGAGGAAGGTCCTTCTCGT GATGGTCCGGACTGGGTGTCAAGCATTGGTGCTTCAGAGTCACTTGCAGT GGCTGGTTTCTTTGACGGGACATTGTTGATGCATCGCTTGGAGGGTGGAG AGTTGGAAGAGCGTGCATTTGTGGGGGTGCGTGCGCACATGCGTTCGATT GGGGCAGTGAGTGTGGGGAGTGGGGTTGGGGTGGACAAGCAGGTGGTGGT GACGGGCGGCAAAGATTGTGTGGTGAAGTGTTGGACGGTGCTGGATGACA TCGAGTGCGTTGGCATTGGAGCAGGTCATGAGGGATCGATTACCACCGCA GCAATTGCACCAGGACTGCAAGCTGCCGCGACAGGAGCTTGGGATGGCGG GTTGTGTGTCTGGTCGCTTCCGGACGTGACCGAATCCAAGCCCCAAACTC GGAGTGGTCGGAGGAGGAGGAAGAGCGGGAGTGGAGAGGAAGGTGGGAGT GGTGGTGGCGAGGGGGATGGGGAAGGAGGCGTGGCAGAGTTGAAGATGGA GTGGGAGGAGAAGTCTCTCCTTGTCGGTGCCATCACTGGGCTGGTGTGGA GAGGTGCAGAGGAGCTAGTCACTGGCGCCATGGACCATAGTGTGCGATTG TGGGAGGTGAAGGAAGATGGAGGGTGGGCCTCAAGCAGTGCAAGGCATGC TCATGCCGCAGTGCTGGATGTGACCTTGGCTCCGTCACACTCTGTCGTTG CCAGCGCTCACTCTGACGAGCTCGTTCGCATCTGGGATTTCAGAACACAC GCCTCCTCCTCCTCTTCTTCTTCTTCTGCTGCTGCAGCCCCAACGACCTC CACCCCAGTCTTGACCTTGCGAGGAGCAAAGAGCTGGGTCACTCGTGTGA AATGGAGCCCCGAGCGAGAACACGTCTTGGCCTCAACCGCACAGGACGGG AGGGTGTTGCTGTGGGACACCAGGTCGCCCTCCCTGCCCCTCCACACCGC CACAAAGCACGACGGCAAAGCGCTCGCACTCGCCTTCCCCACAGACGCCC TCATCCTCTCCGGAGGAGAAGACCGCACCATCAGAGCAGCAACCATCGCA TGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig66134:51..1253+

>mRNA_M-pyrifera_M_contig66134.16055.1 ID=mRNA_M-pyrifera_M_contig66134.16055.1|Name=mRNA_M-pyrifera_M_contig66134.16055.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2406bp|location=Sequence derived from alignment at M-pyrifera_M_contig66134:51..1253+ (Macrocystis pyrifera P11B4 male)
TCTTTGCGGTTGGAGTTTCTGGTTGGAGGTGAGATTTTGCGTGGGGCGAT
TGGAGATTGCGTGAGGCGACGGGAGGAGTTGTCGGTGGAAGAAGTAGTGG
AAGTCGAGTACTTCCCTGCTCTCCCCCCACCGGAGGAAGGTCCTTCTCGT
GATGGTCCGGACTGGGTGTCAAGCATTGGTGCTTCAGAGTCACTTGCAGT
GGCTGGTTTCTTTGACGGGACATTGTTGATGCATCGCTTGGAGGGTGGAG
AGTTGGAAGAGCGTGCATTTGTGGGGGTGCGTGCGCACATGCGTTCGATT
GGGGCAGTGAGTGTGGGGAGTGGGGTTGGGGTGGACAAGCAGGTGGTGGT
GACGGGCGGCAAAGATTGTGTGGTGAAGTGTTGGACGGTGCTGGATGACA
TCGAGTGCGTTGGCATTGGAGCAGGTCATGAGGGATCGATTACCACCGCA
GCAATTGCACCAGGACTGCAAGCTGCCGCGACAGGAGCTTGGGATGGCGG
GTTGTGTGTCTGGTCGCTTCCGGACGTGACCGAATCCAAGCCCCAAACTC
GGAGTGGTCGGAGGAGGAGGAAGAGCGGGAGTGGAGAGGAAGGTGGGAGT
GGTGGTGGCGAGGGGGATGGGGAAGGAGGCGTGGCAGAGTTGAAGATGGA
GTGGGAGGAGAAGTCTCTCCTTGTCGGTGCCATCACTGGGCTGGTGTGGA
GAGGTGCAGAGGAGCTAGTCACTGGCGCCATGGACCATAGTGTGCGATTG
TGGGAGGTGAAGGAAGATGGAGGGTGGGCCTCAAGCAGTGCAAGGCATGC
TCATGCCGCAGTGCTGGATGTGACCTTGGCTCCGTCACACTCTGTCGTTG
CCAGCGCTCACTCTGACGAGCTCGTTCGCATCTGGGATTTCAGAACACAC
GCCTCCTCCTCCTCTTCTTCTTCTTCTGCTGCTGCAGCCCCAACGACCTC
CACCCCAGTCTTGACCTTGCGAGGAGCAAAGAGCTGGGTCACTCGTGTGA
AATGGAGCCCCGAGCGAGAACACGTCTTGGCCTCAACCGCACAGGACGGG
AGGGTGTTGCTGTGGGACACCAGGTCGCCCTCCCTGCCCCTCCACACCGC
CACAAAGCACGACGGCAAAGCGCTCGCACTCGCCTTCCCCACAGACGCCC
TCATCCTCTCCGGAGGAGAAGACCGCACCATCAGAGCAGCAACCATCGCA
TGATCTTTGCGGTTGGAGTTTCTGGTTGGAGGTGAGATTTTGCGTGGGGC
GATTGGAGATTGCGTGAGGCGACGGGAGGAGTTGTCGGTGGAAGAAGTAG
TGGAAGTCGAGTACTTCCCTGCTCTCCCCCCACCGGAGGAAGGTCCTTCT
CGTGATGGTCCGGACTGGGTGTCAAGCATTGGTGCTTCAGAGTCACTTGC
AGTGGCTGGTTTCTTTGACGGGACATTGTTGATGCATCGCTTGGAGGGTG
GAGAGTTGGAAGAGCGTGCATTTGTGGGGGTGCGTGCGCACATGCGTTCG
ATTGGGGCAGTGAGTGTGGGGAGTGGGGTTGGGGTGGACAAGCAGGTGGT
GGTGACGGGCGGCAAAGATTGTGTGGTGAAGTGTTGGACGGTGCTGGATG
ACATCGAGTGCGTTGGCATTGGAGCAGGTCATGAGGGATCGATTACCACC
GCAGCAATTGCACCAGGACTGCAAGCTGCCGCGACAGGAGCTTGGGATGG
CGGGTTGTGTGTCTGGTCGCTTCCGGACGTGACCGAATCCAAGCCCCAAA
CTCGGAGTGGTCGGAGGAGGAGGAAGAGCGGGAGTGGAGAGGAAGGTGGG
AGTGGTGGTGGCGAGGGGGATGGGGAAGGAGGCGTGGCAGAGTTGAAGAT
GGAGTGGGAGGAGAAGTCTCTCCTTGTCGGTGCCATCACTGGGCTGGTGT
GGAGAGGTGCAGAGGAGCTAGTCACTGGCGCCATGGACCATAGTGTGCGA
TTGTGGGAGGTGAAGGAAGATGGAGGGTGGGCCTCAAGCAGTGCAAGGCA
TGCTCATGCCGCAGTGCTGGATGTGACCTTGGCTCCGTCACACTCTGTCG
TTGCCAGCGCTCACTCTGACGAGCTCGTTCGCATCTGGGATTTCAGAACA
CACGCCTCCTCCTCCTCTTCTTCTTCTTCTGCTGCTGCAGCCCCAACGAC
CTCCACCCCAGTCTTGACCTTGCGAGGAGCAAAGAGCTGGGTCACTCGTG
TGAAATGGAGCCCCGAGCGAGAACACGTCTTGGCCTCAACCGCACAGGAC
GGGAGGGTGTTGCTGTGGGACACCAGGTCGCCCTCCCTGCCCCTCCACAC
CGCCACAAAGCACGACGGCAAAGCGCTCGCACTCGCCTTCCCCACAGACG
CCCTCATCCTCTCCGGAGGAGAAGACCGCACCATCAGAGCAGCAACCATC
GCATGA
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