mRNA_M-pyrifera_M_contig66038.16036.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig66038.16036.1
Unique NamemRNA_M-pyrifera_M_contig66038.16036.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig66038.16036.1 vs. uniprot
Match: A0A2D5SBF6_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D5SBF6_9PLAN)

HSP 1 Score: 117 bits (292), Expect = 1.480e-25
Identity = 105/301 (34.88%), Postives = 149/301 (49.50%), Query Frame = 1
Query:   10 NTAPIADAGGPYTVNSQGGSVTLDASASFDPDLDEALSYFWDVNGDGEYGDVAGETVTLNWDTLNALGFSELNPSVQVSVRVSDGIGGA-TNSAPVSLDLV--ILPNAVIVGPTDAVTFESLTYTLSTIGG---DGGPYSYQIDWDGDGIFDETVPSTAGDVQLSHTFTQAGVFNVGVLSSDA-----SETGPLAVLPVTVISAVADIGGPYSGNEGSAIPLSASGSTGS-----LFEWDLDNDGQFDDAVGENINFPASDDGVFPIGLRVNGPGGPTAT--TTVTFVSVAPTAAISGSTD 858
            N  P ADAGGPY+  + G ++ L  + S D D   A +Y WD++ DG+Y D +G  VT+N+    A  F+       + +RV+D  G   T+SA +++     + P A   GP      +  T  LS  G    DG   +Y  D D DG +D+   +T     ++   T AG F +G+  +D      ++T  + V     ++  A  GGPYSG  G  I LS + ST +      + WDLDNDGQ+DDA G  +NF A+  G F IGLRV    G T T   TVT  S  P   +S  +D
Sbjct: 1073 NDVPTADAGGPYS-GTVGDTIALSGTGSSDTDGTVA-AYAWDLDNDGQYDDASG--VTVNFAATAAGSFT-------IGLRVTDDDGATDTDSATITVAEPPNVAPTADAGGPYSGTVGD--TIALSGTGSSDTDGTIDAYAWDLDNDGQYDDASGAT-----VNFAATAAGSFTIGLRVTDDDGATDTDTATITVAEPPNVAPTAHAGGPYSGTVGDTIALSGTSSTDTDGTIDAYAWDLDNDGQYDDASGATVNFAATAAGSFTIGLRVTDDDGATDTDSATVTVSSNQPPEVVSPISD 1355          
BLAST of mRNA_M-pyrifera_M_contig66038.16036.1 vs. uniprot
Match: A0A7Y5SS89_9BACT (PKD domain-containing protein (Fragment) n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5SS89_9BACT)

HSP 1 Score: 109 bits (273), Expect = 4.160e-23
Identity = 106/305 (34.75%), Postives = 144/305 (47.21%), Query Frame = 1
Query:   10 NTAPIADAGGPYTVNSQGGSVTLDASASFDPDL--DEALSYFWDVNGDGEYGDVAGETVTLNWDTLNALGFS-----ELN-PSVQVSVRVSDGIGGATNSAPVSLDLV-------ILPNAVIVGPTDAVTFESLTYTLSTIGGDGGPYSYQIDWDGDGIFDETVPSTAGDVQLSHTFTQAGVFNVGVLSSDASETGPLAVLPVTV---ISAVADIGGPYSGNEGSAIPLSASGS-------TGSLFEWDLDNDGQ--FDDAVG--ENINFPASDDGVFPIGLRVNGPGGP--TATTTVTFVSVAP 831
            N  P A AGGPY V+ QG +VTLDA+ S DP+   D  ++Y WD++ DG + D  G    + W T++ALG S     E   PS  + +RV+DG G  TN A  SL +        ++ N   VG T  +TF     T     G+      + +WD D I         G V  +H++  +G +      +D +    + +  VT+       A  GGPY+G EGS +PL  S S       T   FEWDLD DG     DA G    ++FP  D  V  I LRV   GG    ATTT+T  +  P
Sbjct:  606 NEPPAAHAGGPY-VSGQGETVTLDATTSTDPNAPCDSIVAYEWDLDNDGAFDDAGGAKPAVLWATIDALGLSYPADPETGLPSNTIRLRVTDGFG-LTNVATTSLTIYDNRPFAHVVANPTTVGVTAPITFTGSGSTH----GNPNRTIVKYEWDFDYIASNFTVDAIG-VNATHSYPLSGTYTAAHRVTDNNVPPKIDLTTVTIRVNSPPEAHAGGPYTGPEGSLLPLDGSASSDAEDPLTALAFEWDLDYDGLTFHVDATGMQPTVSFP-DDFAVREIALRVTDSGGEHSIATTTLTVTNADP 902          
BLAST of mRNA_M-pyrifera_M_contig66038.16036.1 vs. uniprot
Match: A0A521Y6L6_9BURK (3-carboxy-cis,cis-muconate lactonizing protein (Fragment) n=1 Tax=Aquabacterium sp. TaxID=1872578 RepID=A0A521Y6L6_9BURK)

HSP 1 Score: 108 bits (271), Expect = 8.200e-23
Identity = 88/252 (34.92%), Postives = 124/252 (49.21%), Query Frame = 1
Query:  130 WDVNGDGEYGDVAGETVTLNWDTLNALGFSELNP-SVQVSVRVSDGIGGATNSAPVSLDL---VILP--NAVIVGPTDAVTFESLTYTLSTIGGDGGPYSYQIDWDGDGIFDETVPSTAGDVQLSHTFTQAGVFNVGVLSSDASETGPLAVLPVTVISAVAD-----IGGPYSGNEGSAIPLSASG-STGSLFEWDLDNDGQFDDAVGENINFPASDDGVFPIGLRVNGPGGPTA---TTTVTFVSVAPTAA 840
            WDV+GDGE+ D  G  + L+W  L  LG ++    S+ V    +DG+  A+ S  ++ DL   V+L   +   VG   AV+F SL     ++ G      + +DW GDG   E + S A     SH + + G + V + + D    G         ++   D      GGPY G EGS + LSAS   T   + WDLD DG FDDAVG+  +   +DDG F  G+RV    G      +T VT ++ APTAA
Sbjct:  599 WDVDGDGEFDDAFGNNLALSWADLKRLGINDSGRRSIGVQATSADGVSTASTSLVIA-DLRPTVLLQGGSTARVGAPYAVSFNSLDLADDSVTG------WYLDW-GDGSAIEALGSNA--YAASHVYAEPGSYTVRIGAEDEDTAGSPTYSNAVAVAVAVDRSQVQAGGPYRGEEGSVLTLSASAVGTPVSWAWDLDGDGSFDDAVGQTTSLTPADDGSFAAGVRVTYADGSVVDSYSTPVTVLNRAPTAA 840          
BLAST of mRNA_M-pyrifera_M_contig66038.16036.1 vs. uniprot
Match: A0A522BJX8_9BURK (Tandem-95 repeat protein (Fragment) n=1 Tax=Aquabacterium sp. TaxID=1872578 RepID=A0A522BJX8_9BURK)

HSP 1 Score: 108 bits (271), Expect = 8.770e-23
Identity = 88/252 (34.92%), Postives = 124/252 (49.21%), Query Frame = 1
Query:  130 WDVNGDGEYGDVAGETVTLNWDTLNALGFSELNP-SVQVSVRVSDGIGGATNSAPVSLDL---VILP--NAVIVGPTDAVTFESLTYTLSTIGGDGGPYSYQIDWDGDGIFDETVPSTAGDVQLSHTFTQAGVFNVGVLSSDASETGPLAVLPVTVISAVAD-----IGGPYSGNEGSAIPLSASG-STGSLFEWDLDNDGQFDDAVGENINFPASDDGVFPIGLRVNGPGGPTA---TTTVTFVSVAPTAA 840
            WDV+GDGE+ D  G  + L+W  L  LG ++    S+ V    +DG+  A+ S  ++ DL   V+L   +   VG   AV+F SL     ++ G      + +DW GDG   E + S A     SH + + G + V + + D    G         ++   D      GGPY G EGS + LSAS   T   + WDLD DG FDDAVG+  +   +DDG F  G+RV    G      +T VT ++ APTAA
Sbjct:  581 WDVDGDGEFDDAFGNNLALSWTDLKRLGINDSGRRSIGVQATSADGVSTASTSLVIA-DLRPTVLLQGGSTARVGAPYAVSFNSLDLADDSVTG------WYLDW-GDGSAIEALGSNA--YAASHVYAEPGSYTVRIGAEDEDTAGSPTYSNAVAVAVAVDRSQVQAGGPYRGEEGSVLTLSASAVGTPVSWAWDLDGDGSFDDAVGQTTSLTPADDGSFAAGVRVTYADGSLVDSYSTPVTVLNRAPTAA 822          
BLAST of mRNA_M-pyrifera_M_contig66038.16036.1 vs. uniprot
Match: A0A2D5SA35_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D5SA35_9PLAN)

HSP 1 Score: 107 bits (268), Expect = 2.130e-22
Identity = 92/271 (33.95%), Postives = 136/271 (50.18%), Query Frame = 1
Query:    7 PNTAPIADAGGPYTVNSQGGSVTLDASASFDPDLDEALSYFWDVNGDGEYGDVAGETVTLNWDTLNALGFSELNPSVQVSVRVSDGIGGATNSAPVSLDLVILPNAVIV----GPTDAVTFESLTYTLS-TIGGDGGPYSYQIDWDGDGIFDETVPSTAGDVQLSHTFTQAGVFNVGVLSSDA-----SETGPLAVLPVTVISAVADIGGPYSGNEGSAIPLSASGSTGS-----LFEWDLDNDGQFDDAVGENINFPASDDGVFPIGLRV 774
            PN  P A+AG  +TV + G ++TLD SAS DPD    L Y WD++ DG+Y D  G  VT  +  + A+G      +  V ++V+D   GA ++   S+ +   PNA       GP + V   ++T   S +   DG    YQ D D DG FD+    TA     + +    G + VG+  +D      ++T  + +      +  A  GGPY G  G+ I L  S S  +     L++WDLD DGQ+DDA G +  F A++ G F +GL+V
Sbjct: 1066 PNERPTAEAGDAFTVEA-GNTITLDGSASTDPDGTIVL-YQWDLDSDGQYDDATG--VTARFSAV-AVG------TYTVGLQVTDD-DGAQDTDTTSITITAPPNAAPTAKAGGPYEGVVGNTITLDGSASTDTDGTIVLYQWDLDSDGQFDDATGVTA-----NFSAVTVGTYTVGLQVTDDDGAQDTDTTSITITAPPNAAPTAKAGGPYEGVVGNTITLDGSASVDADGTVVLYQWDLDGDGQYDDANGVSAEFYAAEAGTFTVGLQV 1319          
BLAST of mRNA_M-pyrifera_M_contig66038.16036.1 vs. uniprot
Match: M5SUU8_9BACT (Spore coat protein CotH n=2 Tax=Rhodopirellula sp. SWK7 TaxID=595460 RepID=M5SUU8_9BACT)

HSP 1 Score: 105 bits (261), Expect = 1.760e-21
Identity = 100/320 (31.25%), Postives = 146/320 (45.62%), Query Frame = 1
Query:   10 NTAPIADAGGPYTVNSQGGSVTLDASASFDPDLDEALSYFWDVNGDGEYGDVAGETVTLNWDTLNALGFSELNPSVQVSVRVSDGIGGA--------TNSAPVSLDLVILPNAVIVGPTDAVTFESLTY----------TLSTIGGDGGPYSYQIDWDGDGIFDETVPSTAGDVQLSHTFTQAGVFNV---------GVLSSDASETGPLAVLPVTVI------------SAVADIGGPYSGNEGSAIPLSASGSTGS-----LFEWDLDNDGQFDDAVGENINFPASDDGVFPIGLRVNGPGGPTATTTVTFVSVAPTA 837
            N  PIADAGGPYTV   G +V+L  ++S D D   A +Y WD++ DG+Y D  G T T +         + L  +  V ++V+D  G           N+ PV   LV++         D+ T + ++           T++   GD G  +         I   ++  TA +  ++  F+  GV +           VLS  +S+T   ++  VT++              VAD GGPY+G+E   I LS SGST S      + WDLDNDG++DDA G    F A+  G + +GL+V    G T T T T    A TA
Sbjct:  873 NVDPIADAGGPYTVT-VGDTVSLSGTSSTDSDGTIA-AYAWDLDNDGQYDDATGVTTTFD---------ASLAGTFTVGLQVTDDAGATDVDTATVTVNAVPVDAGLVVVEMDGTTSVDDSGTSDVISVRLASQPTSDVTIAIESGDTGEVT---------ISTSSLTFTASNWDVAQVFSVTGVADSIVDGTQTTDVVLSVVSSDTQYDSLNDVTIVVTSTDPDVPANVDPVADAGGPYTGSETDTIELSGSGSTDSDGTITTYAWDLDNDGEYDDATGITAMFSATASGTYTVGLQVTDDDGATNTDTATVTVEAVTA 1172          
BLAST of mRNA_M-pyrifera_M_contig66038.16036.1 vs. uniprot
Match: A0A7Y5W5I8_9BACT (PKD domain-containing protein n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5W5I8_9BACT)

HSP 1 Score: 99.0 bits (245), Expect = 2.320e-19
Identity = 76/204 (37.25%), Postives = 109/204 (53.43%), Query Frame = 1
Query:   19 PIADAGGPYTVNSQGGSVTLDASASFDPDLDEALSYFWDVNGDGEYGDVAGETVTLNWDTLNALGFSELNPSVQVSVRVSDGIGGATNSAPVSLDL-----VILPNAVIVGPTDAVTFESLTYTLSTIGGDGGPYSYQIDWDGDGIFDETVPSTAGD--VQLSHTFTQAGVFNVGVLSSD--ASETGPLAVLPVTVISAVADIG 603
            P+A AGGPY    +G ++TLD S S+DPD D AL+Y WD+NGDG +GD +G + TL W  L +LG  E      + VRV DG GG   S    L L      +   A I  P   +  E+   +L+    D G + Y IDW GDG +  T+  + G+  V  SH + Q G ++V V ++D   + + P + + V ++   ADIG
Sbjct: 1114 PVASAGGPYAAT-EGDTLTLDGSGSYDPDGD-ALTYSWDINGDGLFGDASGVSPTLTWQQLMSLGIHEGPSLADIRVRVDDGHGGIDTSPAAILVLSNAKPAVSLQAQIDEPRLRLAIEASDPSLADQ--DDG-FFYAIDW-GDG-YTSTIDRSPGNFLVATSHLYAQPGTYSVQVTATDKDGAVSDPASQM-VDIVFDAADIG 1309          
BLAST of mRNA_M-pyrifera_M_contig66038.16036.1 vs. uniprot
Match: A0A7C3FEM5_9CHLR (DUF11 domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3FEM5_9CHLR)

HSP 1 Score: 99.0 bits (245), Expect = 2.360e-19
Identity = 72/191 (37.70%), Postives = 99/191 (51.83%), Query Frame = 1
Query:   19 PIADAGGPYTVNSQGGSVTLDASASFDPDLDEALSYFWDVNGDGEYGDVAGETVTLNWDTLNALGFSELNPSVQVSVRVSDGIGGATNSAPVSLDLVILPNAVIVGPTDAVTFESLTYTLSTIG-GDGGPYSYQIDWDGDGIFDETVPSTAGDVQLSHTFTQAGVFNVGVLSSDASETGPLAVLPVTVISA 588
            P ADA GPY + ++G SV LDASAS DPD D  ++Y WD+N D  YGDV GET T++W TL + G  + + +  +SV V DG GG   +A   +     P  +  G   A   +  T  LS +  GD    S+ I+W GDG  +  V   A    ++HT+T  G F   +L+S   E        + V SA
Sbjct: 1199 PTADANGPYAI-AEGDSVDLDASASSDPDGDP-MTYAWDLNNDAVYGDVTGETPTVDWATLASFGIDD-DGTYPISVEVDDGFGGTDTAASTIVVSNTPPTLLTTGAATADQGQVYTLNLSAVDPGDDTITSWTINW-GDGSIETFVGDPAS---VTHTYTNPG-FTFNILASAIDEDAAYMQNDLVVASA 1381          
BLAST of mRNA_M-pyrifera_M_contig66038.16036.1 vs. uniprot
Match: A0A517V9Z7_9PLAN (Bifunctional hemolysin/adenylate cyclase n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V9Z7_9PLAN)

HSP 1 Score: 95.5 bits (236), Expect = 3.620e-18
Identity = 91/300 (30.33%), Postives = 142/300 (47.33%), Query Frame = 1
Query:   16 APIADAGGPYTVNSQGGSVTLDASASFDPDLDEALSYFWDVNGDGEYGDVAGETVTLNWDTLNALGFSELNPSVQVSVRVSDGIGGATNSAPVSLDLVIL---PNAVIVGPTDAVTFESLTYTLS-TIGGDGGPYSYQIDWDGDGIFDETVPSTAGDVQLSHTFTQAGVFNVGVLSSDASETGPLAVLPVTVISA---VADIGGPYSGNEGSAIPLS-ASGSTGSLFEWDLD-NDGQFD--DAVGENINFPASDDGVFPIGLRVNGPGGPTATTT----VTFVSVAPTAAISGSTDLYRG 870
            AP A   GPY++  +G  ++LDAS +  P L  ++SY WD+NGDG++GDV G +  +NW TL   G  + N + Q++V+ ++  G    S      L++    P   +VG + +  + S    LS T  GD     Y +DW GDG    T  +     +L HT+T +G F + V + D       A   V VI+       + G  S NE  +  L+  S   G++  W ++  DG     ++    +N   +DDGV+ +   V    G TA  T    V   ++APT   SG++    G
Sbjct: 2632 APTAAVDGPYSIV-EGNGLSLDASGTIAPALGGSVSYSWDINGDGQFGDVIGLSPVINWATLIEFGIDD-NETYQIAVQATNSEG----SDEAFTTLIVHNTDPILNLVGGSSSTQYVSYVLDLSATDPGDDTISEYMVDW-GDGS--STTLTNEATTRLLHTYTTSGNFTITVNAIDEDGGPYTATNDVNVIAGPPPTRTLSGAASLNESESFALTLTSAGPGTVASWRVNWGDGTTSTLNSASGLLNHLYADDGVYQVSAIVTDSNGATALATNSLSVRVENIAPTVTYSGTSSAVEG 2922          
BLAST of mRNA_M-pyrifera_M_contig66038.16036.1 vs. uniprot
Match: UPI0015BEB10B (PKD domain-containing protein n=1 Tax=endosymbiont of Lamellibrachia barhami TaxID=205975 RepID=UPI0015BEB10B)

HSP 1 Score: 95.1 bits (235), Expect = 4.560e-18
Identity = 89/264 (33.71%), Postives = 128/264 (48.48%), Query Frame = 1
Query:   10 NTAPIADAGGPYTVNSQGGSVTLDASASFDPDLDEA-LSYFWDVNGDGEYGDVAGETVTLNWDTLNALGFSELNPSVQVSVRVSDGIGGATNSAPVSLDLVILPNAVIVGPTDAVTFESLTYTLSTIGGDGGPYS-YQIDWDGDGIFDETVPSTAGDVQLSHTFTQAGVFNVGVLSSDASETGPLAVLPVTV--ISAVADIGGPYSGNEGSAIPLSAS----GSTGS-LFEWDLDNDGQFDDAVGENINFPASDDGVFPIGLRV 774
            N APIA+AGGPYT+N +G  VTLD S S DPD   + LSY WD++GDG+Y D  G TVTL             N S  V ++VSDG+  AT++A V+++ V    A   GP  A+  E  T + S    D G    + I+W     F +     +G +  SHT+   GV+ V +  +D         L VTV  ++   D G     NEG  +  + S    GS  +   EW+   DG    +     +   +D+G++ + L V
Sbjct: 1570 NAAPIANAGGPYTIN-EGQGVTLDGSGSNDPDNGPSPLSYAWDLDGDGQYDDATGITVTLP--------IQPDNTSFTVGLQVSDGLLTATDTATVTVNNVA--PAANAGPDQAIN-EGNTASFSGSFTDPGTVDIHTIEWS----FGDGSAPVSGSLTPSHTYADNGVYTVTLTVTDKDGGMGADTLTVTVNNVAPAVDAGADQMFNEGDTVNFAGSFTDPGSVDTHTIEWNF-GDGSAPVSGSLTPSHTYADNGIYTVTLTV 1816          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66038.16036.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D5SBF6_9PLAN1.480e-2534.88Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A7Y5SS89_9BACT4.160e-2334.75PKD domain-containing protein (Fragment) n=1 Tax=P... [more]
A0A521Y6L6_9BURK8.200e-2334.923-carboxy-cis,cis-muconate lactonizing protein (Fr... [more]
A0A522BJX8_9BURK8.770e-2334.92Tandem-95 repeat protein (Fragment) n=1 Tax=Aquaba... [more]
A0A2D5SA35_9PLAN2.130e-2233.95Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
M5SUU8_9BACT1.760e-2131.25Spore coat protein CotH n=2 Tax=Rhodopirellula sp.... [more]
A0A7Y5W5I8_9BACT2.320e-1937.25PKD domain-containing protein n=1 Tax=Pirellulales... [more]
A0A7C3FEM5_9CHLR2.360e-1937.70DUF11 domain-containing protein n=1 Tax=Anaeroline... [more]
A0A517V9Z7_9PLAN3.620e-1830.33Bifunctional hemolysin/adenylate cyclase n=1 Tax=G... [more]
UPI0015BEB10B4.560e-1833.71PKD domain-containing protein n=1 Tax=endosymbiont... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig66038contigM-pyrifera_M_contig66038:411..1298 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score110.2
Seed ortholog evalue1.7e-21
Seed eggNOG ortholog595460.RRSWK_06974
KEGG koko:K06330
Hectar predicted targeting categoryother localisation
EggNOG free text desc.CotH kinase protein
EggNOG OGs2IYR8@203682,COG1404@1,COG1404@2,COG3291@1,COG3291@2,COG5337@1,COG5337@2,COG5549@1,COG5549@2
COG Functional cat.M
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size888
Cds size888
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816549.5540173-CDS-M-pyrifera_M_contig66038:410..12981622816549.5540173-CDS-M-pyrifera_M_contig66038:410..1298Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66038 411..1298 +
1692278040.9030418-CDS-M-pyrifera_M_contig66038:410..12981692278040.9030418-CDS-M-pyrifera_M_contig66038:410..1298Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig66038 411..1298 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig66038.16036.1prot_M-pyrifera_M_contig66038.16036.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig66038 411..1298 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig66038.16036.1

>prot_M-pyrifera_M_contig66038.16036.1 ID=prot_M-pyrifera_M_contig66038.16036.1|Name=mRNA_M-pyrifera_M_contig66038.16036.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=296bp
TAPNTAPIADAGGPYTVNSQGGSVTLDASASFDPDLDEALSYFWDVNGDG
EYGDVAGETVTLNWDTLNALGFSELNPSVQVSVRVSDGIGGATNSAPVSL
DLVILPNAVIVGPTDAVTFESLTYTLSTIGGDGGPYSYQIDWDGDGIFDE
TVPSTAGDVQLSHTFTQAGVFNVGVLSSDASETGPLAVLPVTVISAVADI
GGPYSGNEGSAIPLSASGSTGSLFEWDLDNDGQFDDAVGENINFPASDDG
VFPIGLRVNGPGGPTATTTVTFVSVAPTAAISGSTDLYRGETVTFA
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mRNA from alignment at M-pyrifera_M_contig66038:411..1298+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig66038.16036.1 ID=mRNA_M-pyrifera_M_contig66038.16036.1|Name=mRNA_M-pyrifera_M_contig66038.16036.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig66038:411..1298+ (Macrocystis pyrifera P11B4 male)
ACAGCTCCGAACACCGCTCCAATAGCTGATGCAGGTGGGCCTTACACGGT GAACTCTCAGGGCGGTTCGGTCACGCTCGACGCGTCGGCTTCGTTCGACC CAGACCTGGATGAGGCCCTGAGCTACTTCTGGGATGTCAACGGAGACGGC GAGTATGGGGACGTGGCCGGAGAAACAGTCACGCTCAATTGGGACACGTT GAATGCGTTGGGCTTCAGTGAGCTAAACCCATCGGTGCAGGTCTCGGTGC GTGTGTCCGATGGAATCGGCGGGGCAACGAACTCGGCCCCCGTATCGCTC GATTTAGTCATTCTACCCAACGCCGTGATTGTGGGTCCCACCGATGCGGT AACTTTTGAATCGCTGACGTACACACTCTCAACCATCGGTGGTGATGGTG GGCCCTACTCGTATCAAATCGATTGGGATGGCGACGGCATATTTGACGAA ACGGTGCCCAGCACTGCGGGCGATGTTCAACTGTCGCACACCTTCACCCA AGCTGGTGTATTCAACGTCGGCGTGTTGTCCAGCGACGCTTCGGAAACTG GACCTTTGGCGGTTCTTCCCGTCACCGTCATCTCTGCGGTGGCCGACATC GGAGGACCGTATTCAGGCAACGAGGGATCGGCAATTCCGCTTAGTGCGTC TGGTAGTACCGGATCGCTATTCGAGTGGGACTTGGACAACGATGGACAAT TCGACGACGCCGTGGGCGAGAATATCAACTTTCCCGCCAGCGACGATGGC GTGTTTCCTATCGGTCTTCGCGTGAACGGTCCCGGGGGCCCGACTGCAAC CACGACGGTAACGTTCGTCAGCGTCGCCCCCACGGCGGCGATTTCAGGAT CGACCGATTTGTATCGAGGCGAGACCGTCACCTTCGCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig66038:411..1298+

>mRNA_M-pyrifera_M_contig66038.16036.1 ID=mRNA_M-pyrifera_M_contig66038.16036.1|Name=mRNA_M-pyrifera_M_contig66038.16036.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1776bp|location=Sequence derived from alignment at M-pyrifera_M_contig66038:411..1298+ (Macrocystis pyrifera P11B4 male)
ACAGCTCCGAACACCGCTCCAATAGCTGATGCAGGTGGGCCTTACACGGT
GAACTCTCAGGGCGGTTCGGTCACGCTCGACGCGTCGGCTTCGTTCGACC
CAGACCTGGATGAGGCCCTGAGCTACTTCTGGGATGTCAACGGAGACGGC
GAGTATGGGGACGTGGCCGGAGAAACAGTCACGCTCAATTGGGACACGTT
GAATGCGTTGGGCTTCAGTGAGCTAAACCCATCGGTGCAGGTCTCGGTGC
GTGTGTCCGATGGAATCGGCGGGGCAACGAACTCGGCCCCCGTATCGCTC
GATTTAGTCATTCTACCCAACGCCGTGATTGTGGGTCCCACCGATGCGGT
AACTTTTGAATCGCTGACGTACACACTCTCAACCATCGGTGGTGATGGTG
GGCCCTACTCGTATCAAATCGATTGGGATGGCGACGGCATATTTGACGAA
ACGGTGCCCAGCACTGCGGGCGATGTTCAACTGTCGCACACCTTCACCCA
AGCTGGTGTATTCAACGTCGGCGTGTTGTCCAGCGACGCTTCGGAAACTG
GACCTTTGGCGGTTCTTCCCGTCACCGTCATCTCTGCGGTGGCCGACATC
GGAGGACCGTATTCAGGCAACGAGGGATCGGCAATTCCGCTTAGTGCGTC
TGGTAGTACCGGATCGCTATTCGAGTGGGACTTGGACAACGATGGACAAT
TCGACGACGCCGTGGGCGAGAATATCAACTTTCCCGCCAGCGACGATGGC
GTGTTTCCTATCGGTCTTCGCGTGAACGGTCCCGGGGGCCCGACTGCAAC
CACGACGGTAACGTTCGTCAGCGTCGCCCCCACGGCGGCGATTTCAGGAT
CGACCGATTTGTATCGAGGCGAGACCGTCACCTTCGCCACAGCTCCGAAC
ACCGCTCCAATAGCTGATGCAGGTGGGCCTTACACGGTGAACTCTCAGGG
CGGTTCGGTCACGCTCGACGCGTCGGCTTCGTTCGACCCAGACCTGGATG
AGGCCCTGAGCTACTTCTGGGATGTCAACGGAGACGGCGAGTATGGGGAC
GTGGCCGGAGAAACAGTCACGCTCAATTGGGACACGTTGAATGCGTTGGG
CTTCAGTGAGCTAAACCCATCGGTGCAGGTCTCGGTGCGTGTGTCCGATG
GAATCGGCGGGGCAACGAACTCGGCCCCCGTATCGCTCGATTTAGTCATT
CTACCCAACGCCGTGATTGTGGGTCCCACCGATGCGGTAACTTTTGAATC
GCTGACGTACACACTCTCAACCATCGGTGGTGATGGTGGGCCCTACTCGT
ATCAAATCGATTGGGATGGCGACGGCATATTTGACGAAACGGTGCCCAGC
ACTGCGGGCGATGTTCAACTGTCGCACACCTTCACCCAAGCTGGTGTATT
CAACGTCGGCGTGTTGTCCAGCGACGCTTCGGAAACTGGACCTTTGGCGG
TTCTTCCCGTCACCGTCATCTCTGCGGTGGCCGACATCGGAGGACCGTAT
TCAGGCAACGAGGGATCGGCAATTCCGCTTAGTGCGTCTGGTAGTACCGG
ATCGCTATTCGAGTGGGACTTGGACAACGATGGACAATTCGACGACGCCG
TGGGCGAGAATATCAACTTTCCCGCCAGCGACGATGGCGTGTTTCCTATC
GGTCTTCGCGTGAACGGTCCCGGGGGCCCGACTGCAACCACGACGGTAAC
GTTCGTCAGCGTCGCCCCCACGGCGGCGATTTCAGGATCGACCGATTTGT
ATCGAGGCGAGACCGTCACCTTCGCC
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