mRNA_M-pyrifera_M_contig66017.16031.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig66017.16031.1 vs. uniprot
Match: D8LC08_ECTSI (Bardet-Biedl syndrome protein 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC08_ECTSI) HSP 1 Score: 190 bits (482), Expect = 3.550e-54 Identity = 94/122 (77.05%), Postives = 109/122 (89.34%), Query Frame = 1
Query: 22 SLQVIHFSIKPLSLHRRVHNMHPDSQARPMNALVLRGSFTMQVFHDWLASCLPDVPPRVSEEDEEATLNFENIFSGGIMIASYRKGAAVLRSDSASTLAIVKELVSKEATARRLAITDSFKV 387
S QVIHFS+KPLSLH RVH M + QARPMNALVLRG+FTMQV HDWLA CLPDVPPR+S E E+ATLNFEN+F+GGI+ ASYR+GAAV+ SDSASTLAIVKEL+SKEAT+RR+ ITD+F+V
Sbjct: 498 SAQVIHFSMKPLSLHHRVHAMPRNLQARPMNALVLRGNFTMQVIHDWLAMCLPDVPPRISAEAEDATLNFENVFTGGILTASYRRGAAVVSSDSASTLAIVKELISKEATSRRVHITDTFQV 619
BLAST of mRNA_M-pyrifera_M_contig66017.16031.1 vs. uniprot
Match: A0A7S1C5K1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C5K1_9STRA) HSP 1 Score: 120 bits (300), Expect = 7.730e-29 Identity = 64/130 (49.23%), Postives = 88/130 (67.69%), Query Frame = 1
Query: 4 IAHSTP-SLQVIHFSIKPLSLHRRVHNMHPDSQARPMNALVLRGSFTMQVFHDWLASCLPDVPPRVSEEDEEATLNFENIFSGGIMIASYRKGAAVLRSDSASTLAIVKELVSKEATARRLAITDSFKVK 390
IA P + Q++ IKPLSLH H +H D RPMN L L G+FT+ H+W+A+CLPDVP RV E+ E + F N+F G + ASY+KG AV SDS ST+AI+KE+++K ATAR++ + SF++K
Sbjct: 481 IAKMAPKTAQIVRLQIKPLSLH---HRLHGDIDGRPMNRLRLAGAFTLGQMHEWVANCLPDVPSRVMED--EVRMVFRNVFLGTQLSASYKKGEAVFLSDSISTIAILKEVITKAATARKVRVELSFEIK 605
BLAST of mRNA_M-pyrifera_M_contig66017.16031.1 vs. uniprot
Match: K3WA10_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WA10_GLOUD) HSP 1 Score: 112 bits (279), Expect = 5.330e-26 Identity = 54/125 (43.20%), Postives = 80/125 (64.00%), Query Frame = 1
Query: 28 QVIHFSIKPLSLHRRVHNMHPDSQARPMNALVLRGSFTMQVFHDWLASCLPDVPPRVSEEDEEATLNFENIFSGGIMIASYRKGAAVLRSDSASTLAIVKELVSKEATARRLAITDSFKVKKRNL 402
Q + F +KPLSLH RV+ + + P N L G FT+ HDW++ CLP+VP R+ +DEE T+ ++N F G +++ YRKG A S S S +AI+KE+++KEATAR++ + S VKK +
Sbjct: 492 QCVKFYVKPLSLHHRVNEVDESALKMPTNTLQFSGPFTLVQIHDWVSMCLPEVPGRL--QDEEVTMYYKNTFLGNLLLCRYRKGEATFSSPSVSVIAILKEMITKEATARKVTLNMSLDVKKETI 614
BLAST of mRNA_M-pyrifera_M_contig66017.16031.1 vs. uniprot
Match: A0A4U5N6F7_STECR (Uncharacterized protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4U5N6F7_STECR) HSP 1 Score: 104 bits (259), Expect = 7.630e-25 Identity = 54/117 (46.15%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 40 FSIKPLSLHRRVHNMHPDSQARPMNALVLRGSFTMQVFHDWLASCLPDVPPRVSEEDEEATLNFENIFSGGIMI-ASYRKGAAVLRSDSASTLAIVKELVSKEATARRLAITDSFKV 387
+ +KPLSLH RVHN ++RP+N+L + GSFTM H WL CL ++P R D+ T NF + ++GG + A+Y KG AV RSD+ ST+AI+K+L+SKEAT +++ I + +V
Sbjct: 15 YPVKPLSLHERVHNF---DESRPLNSLTVTGSFTMGETHGWLNMCLSEIPQR-PPTDDVVTFNFASTYNGGTQLQATYGKGRAVYRSDNLSTIAIIKDLISKEATKKQIKINVNIEV 127
BLAST of mRNA_M-pyrifera_M_contig66017.16031.1 vs. uniprot
Match: A0A8K1CBX7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBX7_PYTOL) HSP 1 Score: 108 bits (270), Expect = 8.530e-25 Identity = 51/125 (40.80%), Postives = 81/125 (64.80%), Query Frame = 1
Query: 28 QVIHFSIKPLSLHRRVHNMHPDSQARPMNALVLRGSFTMQVFHDWLASCLPDVPPRVSEEDEEATLNFENIFSGGIMIASYRKGAAVLRSDSASTLAIVKELVSKEATARRLAITDSFKVKKRNL 402
Q + F +KPLSLH R++ + + PMNAL L G FT+ H+W++ CLP+VP R+ E+D + ++N + G +++ YRKG A S S S +AI+KE+++KEATAR++ + S +KK +
Sbjct: 444 QSVRFYVKPLSLHHRINEVDENELKGPMNALHLSGQFTLLQIHEWVSLCLPEVPSRLQEDD--VVMYYKNTYVGNLLVCRYRKGEASFSSPSVSVIAILKEVITKEATARKVTLNLSLDIKKETI 566
BLAST of mRNA_M-pyrifera_M_contig66017.16031.1 vs. uniprot
Match: A0A7S1UCM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCM8_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.190e-24 Identity = 56/139 (40.29%), Postives = 91/139 (65.47%), Query Frame = 1
Query: 1 LIAHSTP-SLQVIHFSIKPLSLHRRVHNMHPDSQARPMNALVLRGSFTMQVFHDWLASCLPDVPPRVSEEDEEATLNFENIFSGGIMIASYRKGAAVLRSDSASTLAIVKELVSKEATARRLAITDSFKVKKRNLSRSL 414
++A+++P S QV+ +KPLSLH+R H + P+ + +V+ G FT FH+W+ LP+VP R+ D E +LNF+N+F G ++ +YR+G A + +DS S+LAI+KE +SK ATA+R+ I + + +R + SL
Sbjct: 470 IVANTSPRSAQVLKIPVKPLSLHQRAH-IAPEPVGSDRHRMVISGDFTCNKFHEWIGKILPEVPARL--RDAEISLNFKNVFGGTFIMLAYREGEATVEADSISSLAIIKEYISKMATAQRIQILEEVQSSRRAMLHSL 605
BLAST of mRNA_M-pyrifera_M_contig66017.16031.1 vs. uniprot
Match: A0A5D6XJS9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJS9_9STRA) HSP 1 Score: 107 bits (267), Expect = 2.210e-24 Identity = 54/125 (43.20%), Postives = 78/125 (62.40%), Query Frame = 1
Query: 28 QVIHFSIKPLSLHRRVHNMHPDSQARPMNALVLRGSFTMQVFHDWLASCLPDVPPRVSEEDEEATLNFENIFSGGIMIASYRKGAAVLRSDSASTLAIVKELVSKEATARRLAITDSFKVKKRNL 402
Q I F +KPLSLH RV+ + +P N L G+FT+ H+W+A CLP+VP R+ +DEE T+ ++N F G + YRKG A S S S +AI+KE+V+KEAT R++ + + VKK +
Sbjct: 489 QSIRFFVKPLSLHHRVNAVDESELKKPTNTLQFSGAFTLVQIHEWVAMCLPEVPGRL--QDEEVTMCYKNTFLGNYLTCRYRKGEATFASPSVSVIAILKEVVTKEATTRKVTLNIALDVKKETI 611
BLAST of mRNA_M-pyrifera_M_contig66017.16031.1 vs. uniprot
Match: A0A1I7YT33_9BILA (Uncharacterized protein n=1 Tax=Steinernema glaseri TaxID=37863 RepID=A0A1I7YT33_9BILA) HSP 1 Score: 103 bits (256), Expect = 2.270e-24 Identity = 55/122 (45.08%), Postives = 81/122 (66.39%), Query Frame = 1
Query: 40 FSIKPLSLHRRVHNMHPDSQARPMNALVLRGSFTMQVFHDWLASCLPDVPPRVSEEDEEATLNFENIFSGGIMI-ASYRKGAAVLRSDSASTLAIVKELVSKEATARRLAITDSFKVKKRNL 402
+ +KPLSLH RVH+ +ARP+N L + GSFTM H WL+ CL ++P R D+ + NF + ++GG + ASY KG AV RSD+ ST+AI+K+L+SKEAT +++ I S V + ++
Sbjct: 4 YPVKPLSLHERVHSF---DEARPLNTLTVTGSFTMGEAHGWLSMCLSEIPLR-PPTDDFVSFNFASTYNGGTQLQASYGKGKAVYRSDNLSTVAIIKDLISKEATRKQIKINVSIDVSEESI 121
BLAST of mRNA_M-pyrifera_M_contig66017.16031.1 vs. uniprot
Match: A0A421GMA2_9STRA (Cupin_8 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GMA2_9STRA) HSP 1 Score: 106 bits (264), Expect = 5.840e-24 Identity = 54/137 (39.42%), Postives = 86/137 (62.77%), Query Frame = 1
Query: 4 IAHSTP-SLQVIHFSIKPLSLHRRVHNMHPDSQA---RPMNALVLRGSFTMQVFHDWLASCLPDVPPRVSEEDEEATLNFENIFSGGIMIASYRKGAAVLRSDSASTLAIVKELVSKEATARRLAITDSFKVKKRNL 402
+A++ P S Q + F +KPLSLH RV+ + +A +P N L L G F++ HDW++ CLP+VP R+ + +E TL + N F G +++ Y KG A + S S +AI+KE+++KEATAR+ + S +KK ++
Sbjct: 791 VANTQPRSAQTVKFFVKPLSLHHRVNELSEAEEAEFQKPCNTLQLSGDFSLVQIHDWVSMCLPEVPGRL--QSDEVTLRYRNTFVGSLLVCRYSKGEASFSTPSVSAIAILKEIITKEATARKATLNISLDIKKESV 925
BLAST of mRNA_M-pyrifera_M_contig66017.16031.1 vs. uniprot
Match: A0A1I8J8D3_9PLAT (Uncharacterized protein n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8J8D3_9PLAT) HSP 1 Score: 105 bits (262), Expect = 1.040e-23 Identity = 59/143 (41.26%), Postives = 93/143 (65.03%), Query Frame = 1
Query: 1 LIAHSTPSLQ-----VIHFSIKPLSLHRRVHNMHPDSQARPMNALVLRGSFTMQVFHDWLASCLPDVPPRVSEEDEEATLNFENIFSGGIMIASYRKGAAVLRSDSASTLAIVKELVSKEATARRLAITDSFKVKKRNLSRSL 414
L+A+ TP LQ ++ + IKPLSLHRR H + ++RP+N+L L G+F++ H W+A + +VP + + DE L FEN F G A Y+KG AV RSD+ ST++I+KE +SKEAT R++A+ ++V +++S ++
Sbjct: 467 LMAYVTPRLQPKVCQLLAYHIKPLSLHRRAHEL---DESRPLNSLTLTGAFSLAEIHHWVAFLVGEVPEK-APADEAGWLVFENTFLGTQFEARYKKGEAVFRSDNLSTISIIKECLSKEATKRKIALQIGYEVNDQSVSHTI 605 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig66017.16031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig66017.16031.1 >prot_M-pyrifera_M_contig66017.16031.1 ID=prot_M-pyrifera_M_contig66017.16031.1|Name=mRNA_M-pyrifera_M_contig66017.16031.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp LIAHSTPSLQVIHFSIKPLSLHRRVHNMHPDSQARPMNALVLRGSFTMQVback to top mRNA from alignment at M-pyrifera_M_contig66017:98..851- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig66017.16031.1 ID=mRNA_M-pyrifera_M_contig66017.16031.1|Name=mRNA_M-pyrifera_M_contig66017.16031.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=754bp|location=Sequence derived from alignment at M-pyrifera_M_contig66017:98..851- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig66017:98..851- >mRNA_M-pyrifera_M_contig66017.16031.1 ID=mRNA_M-pyrifera_M_contig66017.16031.1|Name=mRNA_M-pyrifera_M_contig66017.16031.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=828bp|location=Sequence derived from alignment at M-pyrifera_M_contig66017:98..851- (Macrocystis pyrifera P11B4 male)back to top |