mRNA_M-pyrifera_M_contig6599.16021.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig6599.16021.1
Unique NamemRNA_M-pyrifera_M_contig6599.16021.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig6599.16021.1 vs. uniprot
Match: D7G6P5_ECTSI (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P5_ECTSI)

HSP 1 Score: 337 bits (863), Expect = 9.010e-116
Identity = 165/200 (82.50%), Postives = 177/200 (88.50%), Query Frame = 2 
Query:   26 VNMFKTLAFAAATVFGLANAADDVTAVTHRVFFDISIAGEPRGRISMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFLPELKHDKPGVLSMANAGKNTNGSQFFMCTVPTPWLDGKHVIFGQVEEESMALVYEIEKIGSRSGAPSEKVEITDSGML 625
            + +F+ L    ATV G  +A  DVT VTHRV+FDISI G   GRI+MGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHR+IPQFMLQGGDFTHGTGTGGESIYGGKFDDEAF PEL HDKPGVLSMAN+GK+TNGSQFF+CTVPTPWL+GKHVIFGQVEEESM LV  IEK+GSRSGA SEKVEITDSG L
Sbjct:    1 MKIFQALILGMATVAGTVSADADVTDVTHRVYFDISIGGTEAGRITMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRVIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPPELIHDKPGVLSMANSGKDTNGSQFFICTVPTPWLNGKHVIFGQVEEESMELVSRIEKLGSRSGALSEKVEITDSGEL 200
[Close]
BLAST of mRNA_M-pyrifera_M_contig6599.16021.1 vs. uniprot
Match: A0A835ZLK1_9STRA (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLK1_9STRA)

HSP 1 Score: 270 bits (689), Expect = 2.710e-89
Identity = 132/177 (74.58%), Postives = 147/177 (83.05%), Query Frame = 2 
Query:   95 VTAVTHRVFFDISIAGEPRGRISMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFLPELKHDKPGVLSMANAGKNTNGSQFFMCTVPTPWLDGKHVIFGQVEEESMALVYEIEKIGSRSGAPSEKVEITDSGML 625
            V +VT  VFFD+ I G+P GRI MGL+G AVPKTVENFR LCTGE G GKVY KPL YKGS+FHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAF  ELKH +PG+LSMANAG NTNGSQFF+ TV TPWLDGKHVIFG+V E  M +V  IEK+GS+SG P  KV++ DSG +
Sbjct:   21 VDSVTKMVFFDMEIDGKPGGRIVMGLYGEAVPKTVENFRALCTGEKGVGKVYHKPLTYKGSSFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFPKELKHKEPGMLSMANAGPNTNGSQFFITTVATPWLDGKHVIFGKVLE-GMDVVKSIEKLGSQSGRPQAKVKVADSGEI 196
[Close]
BLAST of mRNA_M-pyrifera_M_contig6599.16021.1 vs. uniprot
Match: A0A7S1FIF5_NOCSC (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1FIF5_NOCSC)

HSP 1 Score: 245 bits (626), Expect = 7.380e-80
Identity = 123/174 (70.69%), Postives = 140/174 (80.46%), Query Frame = 2 
Query:  104 VTHRVFFDISIAGEPRGRISMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFLPELKHDKPGVLSMANAGKNTNGSQFFMCTVPTPWLDGKHVIFGQVEEESMALVYEIEKIGSRSGAPSEKVEITDSGML 625
            VTH+VFFDI++ GE  GRI MGL+G+ VPKTVENFR LCTGE G GK   KPLHYKGS FHR+IP FMLQGGDFTHGTGTGGESIYG KF+DE F  +LKH  PG LSMANAGKNTNGSQFF+ TV T WLDGKHV+FG+V E  M +V ++E +GS+SG  S+ VEI DSG L
Sbjct:   21 VTHKVFFDITLDGEDAGRIVMGLYGDVVPKTVENFRALCTGEKGVGKS-GKPLHYKGSKFHRVIPNFMLQGGDFTHGTGTGGESIYGSKFNDENF--QLKHTAPGKLSMANAGKNTNGSQFFITTVTTSWLDGKHVVFGEVLE-GMDIVQKVEAVGSQSGKTSKLVEIKDSGEL 190
[Close]
BLAST of mRNA_M-pyrifera_M_contig6599.16021.1 vs. uniprot
Match: A0A250XMN2_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XMN2_9CHLO)

HSP 1 Score: 243 bits (620), Expect = 7.610e-79
Identity = 120/174 (68.97%), Postives = 139/174 (79.89%), Query Frame = 2 
Query:  104 VTHRVFFDISIAGEPRGRISMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFLPELKHDKPGVLSMANAGKNTNGSQFFMCTVPTPWLDGKHVIFGQVEEESMALVYEIEKIGSRSGAPSEKVEITDSGML 625
            +TH+VFFDI I G P GR+ MGLFG+ VPKTVENFR LCTGE G G    KPLHYKGSAFHRIIPQFM+QGGDFT G GTGGESIYG +F DE F  +LKH +PG LSMANAG++TNGSQFF+ TV T WLDGKHV+FG+V E  M L+Y++E +G+ SG PS+KV I DSG L
Sbjct:   26 ITHKVFFDIEIDGAPAGRVVMGLFGDTVPKTVENFRALCTGEKGTG-TSGKPLHYKGSAFHRIIPQFMIQGGDFTRGDGTGGESIYGSRFPDENF--KLKHTQPGYLSMANAGRDTNGSQFFITTVKTSWLDGKHVVFGKVLE-GMDLIYKVEALGTGSGKPSKKVVIADSGEL 195
[Close]
BLAST of mRNA_M-pyrifera_M_contig6599.16021.1 vs. uniprot
Match: UPI001F5D2617 (peptidyl-prolyl cis-trans isomerase CYP19-4-like isoform X1 n=4 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D2617)

HSP 1 Score: 243 bits (620), Expect = 1.580e-78
Identity = 124/195 (63.59%), Postives = 144/195 (73.85%), Query Frame = 2 
Query:   41 TLAFAAATVFGLANAADDVTAVTHRVFFDISIAGEPRGRISMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFLPELKHDKPGVLSMANAGKNTNGSQFFMCTVPTPWLDGKHVIFGQVEEESMALVYEIEKIGSRSGAPSEKVEITDSGML 625
            T AFA   +      + D++ VTH+VFFDI I G+P GR+ MGLFGNAVPKT ENFR LCTGE G GK   KPLHYKGS+FHRIIP FM+QGGDFTHG G GGESIYG KF DE F  +LKH  PG LSMANAGK+TNGSQFF+ TV T WLDGKHV+FG+V    M ++Y++E  G +SG P  KV + DSG L
Sbjct:   27 TFAFAQVLIHLAKKPSADLSKVTHKVFFDIEIDGKPAGRVVMGLFGNAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSSFHRIIPSFMIQGGDFTHGNGMGGESIYGTKFADENF--KLKHTGPGYLSMANAGKDTNGSQFFITTVTTSWLDGKHVVFGKVIS-GMDVIYKVEAEGKQSGTPKSKVVVADSGEL 217
[Close]
BLAST of mRNA_M-pyrifera_M_contig6599.16021.1 vs. uniprot
Match: A0A251V0W7_HELAN (Peptidyl-prolyl cis-trans isomerase n=5 Tax=Asteraceae TaxID=4210 RepID=A0A251V0W7_HELAN)

HSP 1 Score: 241 bits (614), Expect = 7.840e-78
Identity = 120/178 (67.42%), Postives = 140/178 (78.65%), Query Frame = 2 
Query:   92 DVTAVTHRVFFDISIAGEPRGRISMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFLPELKHDKPGVLSMANAGKNTNGSQFFMCTVPTPWLDGKHVIFGQVEEESMALVYEIEKIGSRSGAPSEKVEITDSGML 625
            D+T VTH+V+FD+ IAG+P GRI  GLFGN VPKT ENFR LCTGE G GK   KPLHYKGSAFHRIIP FM+QGGDFT G G GGESIYG KF+DE F  ++KH  PG+LSMANAGKNTNGSQFF+ TV T WLDG+HV+FG+V    M +VY++E  G++SG+P  KV I DSG L
Sbjct:   29 DLTDVTHKVYFDVEIAGKPAGRIVFGLFGNTVPKTAENFRALCTGEKGTGKS-GKPLHYKGSAFHRIIPSFMIQGGDFTLGDGRGGESIYGEKFNDENF--KIKHTGPGLLSMANAGKNTNGSQFFITTVTTSWLDGRHVVFGKVLS-GMDVVYKMEAEGTQSGSPKSKVTIVDSGEL 202
[Close]
BLAST of mRNA_M-pyrifera_M_contig6599.16021.1 vs. uniprot
Match: A0A0D2MNZ0_9CHLO (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MNZ0_9CHLO)

HSP 1 Score: 241 bits (614), Expect = 7.840e-78
Identity = 131/195 (67.18%), Postives = 147/195 (75.38%), Query Frame = 2 
Query:   44 LAFAAATVFGLANAADDVTA-VTHRVFFDISIAGEPRGRISMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFLPELKHDKPGVLSMANAGKNTNGSQFFMCTVPTPWLDGKHVIFGQVEEESMALVYEIEKIGSRSGAPSEKVEITDSGML 625
            LA  A+TV  L  A D   A VTH+VFFDI I G+P GRI MGLFG+ VPKTVENFR LCTGE G GK   KPLH+KGS FHRIIPQFM+QGGDFT G GTGGESIYG KF DE F  +LKH  PG LSMANAG NTNGSQFF+ TV T WLDG+HV+FG+V E  M +V ++E IGS SG PS+KV I DSG +
Sbjct:   12 LAICASTV--LVEAKDKKKAEVTHKVFFDIEIDGKPAGRIVMGLFGDIVPKTVENFRALCTGEKGTGKS-GKPLHFKGSVFHRIIPQFMIQGGDFTRGDGTGGESIYGEKFADENF--KLKHKAPGYLSMANAGPNTNGSQFFITTVKTAWLDGRHVVFGKVIE-GMDVVLKVEAIGSGSGTPSKKVTIADSGEI 200
[Close]
BLAST of mRNA_M-pyrifera_M_contig6599.16021.1 vs. uniprot
Match: A0A7S3KS35_EUPCR (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KS35_EUPCR)

HSP 1 Score: 240 bits (613), Expect = 8.250e-78
Identity = 122/195 (62.56%), Postives = 145/195 (74.36%), Query Frame = 2 
Query:   41 TLAFAAATVFGLANAADDVTAVTHRVFFDISIAGEPRGRISMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFLPELKHDKPGVLSMANAGKNTNGSQFFMCTVPTPWLDGKHVIFGQVEEESMALVYEIEKIGSRSGAPSEKVEITDSGML 625
            T+A   A +   A A D +  VTH+V+FD+S+ GE  GR+  GLFG  VPKTVENFR LCTGE G G   +KPLHYKGS FHRIIPQFM QGGDFT+  GTGGESIYG KF+DE F  ELKH KP +LSMANAG NTNGSQFF+  V TPWLDG+H +FG+V E    +V ++EKIGS++G PS++V I DSG L
Sbjct:    5 TIAIFFALLVAFATAEDPIAEVTHKVYFDVSVGGENVGRVVFGLFGGVVPKTVENFRALCTGEKGEGS-NKKPLHYKGSPFHRIIPQFMAQGGDFTNENGTGGESIYGHKFEDENF--ELKHSKPYLLSMANAGPNTNGSQFFITFVVTPWLDGRHTVFGEVLE-GQEIVDQLEKIGSQTGKPSKEVRIVDSGEL 195
[Close]
BLAST of mRNA_M-pyrifera_M_contig6599.16021.1 vs. uniprot
Match: A0A7J7MFB9_9MAGN (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MFB9_9MAGN)

HSP 1 Score: 241 bits (614), Expect = 8.670e-78
Identity = 128/201 (63.68%), Postives = 147/201 (73.13%), Query Frame = 2 
Query:   23 MVNMFKTLAFAAATVFGLANAADDVTAVTHRVFFDISIAGEPRGRISMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFLPELKHDKPGVLSMANAGKNTNGSQFFMCTVPTPWLDGKHVIFGQVEEESMALVYEIEKIGSRSGAPSEKVEITDSGML 625
            +V +F TLA   A       +++D+  VTH+VFFD+ IAG+P GRI MGLFG AVPKT ENFR LCTGE G GK+  KPLHYKGS FHRIIP FMLQGGDFT G G GGESIYG KF DE F  +LKH  PG LSMANAGK+TNGSQFF+ TV T WLDGKHV+FG+V    M +VY+IE  G +SG P  +V I DSG L
Sbjct:   14 LVVVFGTLALIQAK-----KSSEDLKTVTHKVFFDVEIAGKPAGRIVMGLFGKAVPKTAENFRSLCTGEKGIGKI-GKPLHYKGSTFHRIIPSFMLQGGDFTLGDGRGGESIYGEKFADENF--KLKHTGPGFLSMANAGKDTNGSQFFITTVTTSWLDGKHVVFGKVVS-GMDVVYKIEAEGKQSGTPKSEVVIVDSGEL 205
[Close]
BLAST of mRNA_M-pyrifera_M_contig6599.16021.1 vs. uniprot
Match: A0A2K1IH38_PHYPA (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IH38_PHYPA)

HSP 1 Score: 240 bits (613), Expect = 1.110e-77
Identity = 116/174 (66.67%), Postives = 136/174 (78.16%), Query Frame = 2 
Query:  104 VTHRVFFDISIAGEPRGRISMGLFGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRIIPQFMLQGGDFTHGTGTGGESIYGGKFDDEAFLPELKHDKPGVLSMANAGKNTNGSQFFMCTVPTPWLDGKHVIFGQVEEESMALVYEIEKIGSRSGAPSEKVEITDSGML 625
            VTH+VFFD+ I G+P GR+ MGLFG A PKTVENFR LCTGE G G +  KPLH+KGSAFHRIIP FM+QGGDFTHG G GGESIYG KF DE+F  +LKH  PG+LSMANAG NTNGSQFF+CTV T WLDG+HV+FG+V    M +VY++E  G+  G P +KV I DSG +
Sbjct:   33 VTHKVFFDVEIGGQPAGRVVMGLFGKAAPKTVENFRALCTGEKGKG-LSGKPLHFKGSAFHRIIPSFMIQGGDFTHGNGRGGESIYGEKFADESF--KLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDGRHVVFGKVLS-GMDVVYKVEAEGTSGGTPKKKVTIADSGEI 202
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6599.16021.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6P5_ECTSI9.010e-11682.50Peptidyl-prolyl cis-trans isomerase n=2 Tax=Ectoca... [more]
A0A835ZLK1_9STRA2.710e-8974.58Peptidyl-prolyl cis-trans isomerase n=1 Tax=Tribon... [more]
A0A7S1FIF5_NOCSC7.380e-8070.69Peptidyl-prolyl cis-trans isomerase n=1 Tax=Noctil... [more]
A0A250XMN2_9CHLO7.610e-7968.97Peptidyl-prolyl cis-trans isomerase n=1 Tax=Chlamy... [more]
UPI001F5D26171.580e-7863.59peptidyl-prolyl cis-trans isomerase CYP19-4-like i... [more]
A0A251V0W7_HELAN7.840e-7867.42Peptidyl-prolyl cis-trans isomerase n=5 Tax=Astera... [more]
A0A0D2MNZ0_9CHLO7.840e-7867.18Peptidyl-prolyl cis-trans isomerase n=1 Tax=Monora... [more]
A0A7S3KS35_EUPCR8.250e-7862.56Peptidyl-prolyl cis-trans isomerase n=1 Tax=Euplot... [more]
A0A7J7MFB9_9MAGN8.670e-7863.68Peptidyl-prolyl cis-trans isomerase n=1 Tax=Kingdo... [more]
A0A2K1IH38_PHYPA1.110e-7766.67Peptidyl-prolyl cis-trans isomerase n=2 Tax=Physco... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig6599contigM-pyrifera_M_contig6599:2083..6557 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score337.4
Seed ortholog evalue4.5e-90
Seed eggNOG ortholog2880.D7G6P5
KEGG koko:K01802
Hectar predicted targeting categorysignal peptide
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.peptidyl-prolyl cis-trans isomerase activity
EggNOG OGsCOG0652@1,KOG0865@2759
Ec32 ortholog descriptionCyclophilin-type peptidyl-prolyl cis-trans isomerase domain
Ec32 orthologEc-26_000140.1
EC5.2.1.8
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons6
Model size628
Cds size606
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816548.7111225-UTR-M-pyrifera_M_contig6599:2082..21041622816548.7111225-UTR-M-pyrifera_M_contig6599:2082..2104Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6599 2083..2104 +
1692278040.4196227-UTR-M-pyrifera_M_contig6599:2082..21041692278040.4196227-UTR-M-pyrifera_M_contig6599:2082..2104Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig6599 2083..2104 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816548.7233994-CDS-M-pyrifera_M_contig6599:2104..21851622816548.7233994-CDS-M-pyrifera_M_contig6599:2104..2185Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6599 2105..2185 +
1692278040.4376712-CDS-M-pyrifera_M_contig6599:2104..21851692278040.4376712-CDS-M-pyrifera_M_contig6599:2104..2185Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6599 2105..2185 +
1622816548.7357924-CDS-M-pyrifera_M_contig6599:2801..29081622816548.7357924-CDS-M-pyrifera_M_contig6599:2801..2908Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6599 2802..2908 +
1692278040.4581084-CDS-M-pyrifera_M_contig6599:2801..29081692278040.4581084-CDS-M-pyrifera_M_contig6599:2801..2908Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6599 2802..2908 +
1622816548.7465417-CDS-M-pyrifera_M_contig6599:3616..37071622816548.7465417-CDS-M-pyrifera_M_contig6599:3616..3707Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6599 3617..3707 +
1692278040.4714632-CDS-M-pyrifera_M_contig6599:3616..37071692278040.4714632-CDS-M-pyrifera_M_contig6599:3616..3707Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6599 3617..3707 +
1622816548.7583914-CDS-M-pyrifera_M_contig6599:4568..46581622816548.7583914-CDS-M-pyrifera_M_contig6599:4568..4658Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6599 4569..4658 +
1692278040.4845479-CDS-M-pyrifera_M_contig6599:4568..46581692278040.4845479-CDS-M-pyrifera_M_contig6599:4568..4658Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6599 4569..4658 +
1622816548.7721953-CDS-M-pyrifera_M_contig6599:5691..58231622816548.7721953-CDS-M-pyrifera_M_contig6599:5691..5823Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6599 5692..5823 +
1692278040.4973145-CDS-M-pyrifera_M_contig6599:5691..58231692278040.4973145-CDS-M-pyrifera_M_contig6599:5691..5823Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6599 5692..5823 +
1622816548.784256-CDS-M-pyrifera_M_contig6599:6452..65571622816548.784256-CDS-M-pyrifera_M_contig6599:6452..6557Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6599 6453..6557 +
1692278040.5076053-CDS-M-pyrifera_M_contig6599:6452..65571692278040.5076053-CDS-M-pyrifera_M_contig6599:6452..6557Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig6599 6453..6557 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig6599.16021.1prot_M-pyrifera_M_contig6599.16021.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig6599 2105..6557 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig6599.16021.1

>prot_M-pyrifera_M_contig6599.16021.1 ID=prot_M-pyrifera_M_contig6599.16021.1|Name=mRNA_M-pyrifera_M_contig6599.16021.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=202bp
MVNMFKTLAFAAATVFGLANAADDVTAVTHRVFFDISIAGEPRGRISMGL
FGNAVPKTVENFRQLCTGEAGPGKVYRKPLHYKGSAFHRIIPQFMLQGGD
FTHGTGTGGESIYGGKFDDEAFLPELKHDKPGVLSMANAGKNTNGSQFFM
CTVPTPWLDGKHVIFGQVEEESMALVYEIEKIGSRSGAPSEKVEITDSGM
L*
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mRNA from alignment at M-pyrifera_M_contig6599:2083..6557+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig6599.16021.1 ID=mRNA_M-pyrifera_M_contig6599.16021.1|Name=mRNA_M-pyrifera_M_contig6599.16021.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4475bp|location=Sequence derived from alignment at M-pyrifera_M_contig6599:2083..6557+ (Macrocystis pyrifera P11B4 male)
AGAAGAGCAGCGAATAGCAATCATGGTGAACATGTTCAAGACTTTGGCGT
TCGCAGCGGCAACGGTGTTCGGCTTGGCTAATGCCGCTGACGACGTGACT
GCGGTGAGTTCGGTTTTCTTGCCGCTTGCTCATCACGCCGCAACCTATAT
AAAATGCATGCATACCAGGTATAGAACAGGTATAAAGCGGGGACAAAACA
GTTCGGTTCGGAACGCAACCCCATGCTGTCCTACCTGTGACAAGACATCA
TATGTGTATGTGATACGTGACTGATATGGTATACCACGCGCGATTGGCGA
CACGGAAAATGACAACATGACGGTAGCCACCCCGCAGACGCGGAGTTGAG
GCAATGGCGTCACCCTAACCCTAAGAAGGATGCGTTCTTGTTTACTCTTG
CGCGTATGCCAGGTATAAAACTGCTGTAGTACTGCTGTACCATTCCATGG
AAATTATGTTCGATAATGCATGGACGCGCACTGTTAGCAACTACCTTGGT
AGCAGAGCAAAAGTAATTAACGGGGGGACTGTTTGTTTGGCCAGCGCGAG
TGAGCAGAAACCCTGATCTGGCACGTTGTTTGGATTCAACAGCTGAAGGC
GGACATGTCGAAAGTGGGTTGCGAGCGGCTGCTGTGAATGCTGTCGGACC
ACCTCCTTTGTTGATGTTTTGGCGATGATGTAGTCTTGTTATTGGTGATG
GCGCTATTGTGGTGTGCAGGTGACGCACAGGGTGTTCTTCGACATCAGCA
TCGCGGGTGAGCCAAGGGGGCGCATTTCGATGGGCCTTTTTGGAAACGCT
GTTCCCAAGACGGTCGAGAACTTCAGGTAACAGCCTAAACTCAAACGGGT
CCAAAATAATTTCCATGAGAGAAAGACAAAGAGAGGCACTGCCGTACCGT
ACGATGGCATGGCCCATATTATGAGTCTGTTTGAGTGTAGCAACAAGCAT
TTTGTGTATATCTGCGCTTTCCTCCGCAGACGTTTTTCTGGTACCAGGTA
TTTTGCATCAGGCAGGGGTGCACGAAAAAGAGAACACGGAGCCAAACTCG
CCACCATGTCGGCATTGGGAGTTTTGTCAGAAATTAACTAAAACAATTTA
TTTTCACATGATTTGAGTGACCCCCCCCTGCGTGGGACTCAAAAAAAAGG
TGGGGTGTCGGGTTTTTTTCCGGGTACCCTTGTATTGGACACGATTTACA
GTAGTTTATAGGTTGGAGATGTAGGGGCAACAAACGACGAGGGGAGGCAT
TCAGATAAAAGTCTGAGGTAATATGCCGCCTCCAACGTACTTGTATGTGC
TGTAGGCGTCTGACATGCTGTGTCAACGCTGTTTCTCGCGCCAGCGTATT
GCGGCGGAATGGTGGTCAAGACACTGAGCCACTTTTTGCCAAAAATTAGT
CAGATGTGTTGTCATGTGTTAATTTGCCGCAGATGGAACCAGTTGTCTAC
GGTATGAATAGTCTGCTCCTCTTTGAACTGCTTTTTTCGTGAATTATATG
GCTGAATCATTTCTGGAATTTGTATCTGTTTCAGGCAACTGTGCACCGGC
GAGGCCGGACCGGGCAAGGTGTACCGCAAGCCCCTGCACTACAAGGGCTC
TGCTTTCCACCGCATCATCCCGCAGGTGCTTCGAATATTATGCATACAAC
AGCAGTGGGTACCCCGATTTAAGAGCGCCCCGTGAAAAGCCTGAATAAGC
GCTTTCAACGAAAGGTTGCCCCTCTCTGTAGTAGGCGTTATTTACCAGGT
AGCTTTCAAAAAAGCCGGGGCTCACCGATTTGACAGCTCTCAAGTCCCGA
ATTATGCTCATTTAGGTCTCGTCAACCGCTGTACCCACTGTTACTGTATT
TATTACAGTAGTATTATAAGTGACTTTCTGAAGGGAAAATATGAGAATAT
CCACCGGAGATGCCCTTCGATGGGGCAATGTTGTCATGTTGGCATTTCTC
AGGTATACAAGATCAACTGCTGTAGCGGCCATCCATCCCCTCACCACATG
TATACAGTGGGCACCTAGTACCTAATACCGGTACCTCATAGTCTTACGTA
CCAGCGGCGATTATATATTGTTGTGGTTAAAATTGATATTCGATGTGCGA
GTGAAGATTCCGATCGGCCTCCCGCGGAAGAAAGGTACAGCTCGCCGCGC
GTTGGGCAGGATGAACGTGCGTACTCCTTTCGCGGGCTGTAGTTTCTCCG
CAGTGTAAGACAAGAATCCTTGCGTATTGGGTAAGCAGGACACGTTAGGG
TGGAACATCCTTTGTTGCCGATATACGAAACGCATAGTGTCATTGTCCCC
TACTATGGGTATGTATCTGCCTTACGTCGACAGTATCCCTGCTTTTGGCG
CACCGCGTCTGACAAGCTTGTTCGAAAACGGTACGTGTATCCTGTGTCAT
TGTCGTTTGATATGAGGTGGTCATCTGATGCTCATGCGACGTTTTTGTGT
TCTCTCGTGCGCGATATTGGTGCTCTTGGTCCACAGTTTATGCTCCAGGG
GGGGGACTTCACCCACGGCACCGGCACCGGCGGCGAGTCGATCTACGGTG
GCAAGTTCGACGACGAGGCCTTCCTTGTAAGTTGTTACATGCATACTTCG
TTGTACAGTCAGTACGTTGAGCATCAGACAGTGAGGGTCACAGTTCAAGA
GAGGGGCGAGCCAAGCAATGCTGACCTCTCTTGAACCAGAAATATCTTTA
ACCGCAATAGGTATTATATACCAGGTACCTGATAGGGTTTGGTTTGGCCA
TTCTAACCCATTATGACCTCTCGTAATCATCCTCTTAAAGCGATAGCTCC
TAAAATGTGACTCCACTGTAAACTACGGCATCAGCCATCCTCCGTGGCGA
TATCGTTCGAGCATTATGGTTGGTCGTCTAGGTAGCAGGTGGCGGCGCCA
AAAAGCACAAACGTTGTCCATTCTTTTTATTTCAACGGGGACCAAAGCGC
GTTAGGAAATGTTCAAAAAATGGCCTCTATGTTACTACGTACGTACCGGT
ATTTTGTAGAGATGTACAAGATGCGTTCAGGTCCTGTGTGCGAGTTGTAT
CTATCGTGCGCCCCCTTGCCTCCCTTCCGACTCTAGGGTTAGACTTCAAC
CAATTTTGAAGTGGCCGCGATCGAGAATGCTACATGATGCTTCTGTTGCA
GAACGGGTCGTCGTAGGATGAAACAACTATGTTCATGTTGATATTACTTT
TTTGCCTTGTTTTGTGTATGGTGCAACCATGTTCACCGCTATGTATCTGC
CACTTGTGCTCGGCATCCGACGTACTGTTGTTAGGTGCCTGATATGTAGA
CGAATCCAGCTTGTCACATTAAAGTATGTAACAAGAAGCCCGGTGGCAAA
GGGATGGTCGTTGTCCAAACAGCAATTGGACAATTGGCCAAACGCTACGA
GTATCGACTACCAAGAAAAGAATGTCATTGGCCCTTGCTTCGTTGGGTGA
CGGAAAAACGAGTCGTACAGCTCTCCAGGTGGCAGCGTGGACCAACAGTA
GTCGTAATTAGTGCTCACTCTAACCCTAGGTAGTGTAGCTGGGCAGTAAT
ACAGCGATCGCTGATGATACCACGAACGTGCGACGTGTCTGATTTCCTGC
CTTTTCCAGCCCGAGCTGAAGCACGACAAGCCTGGCGTGCTGTCCATGGC
CAACGCCGGCAAGAACACGAACGGCTCCCAGTTCTTCATGTGCACCGTGC
CGACCCCTTGGTTGGACGGCAAGCACGTCATCTTCGGACAGGTGAACCTC
AACCTGCACCCCTTTTCGACCCCTTGACATGTGCACTCCAACCCTAACCC
TATAAACATCGCCCTTTTGGGGTACCAGTACAAAAAATGTTATTCGTCAA
CCTACAACTGTAGTATACGTACTTATATACTAGGTAAGTAGTTGGAGTGT
TTTTGCTATATTAGCTGGTATGACTTGCCTTGGCGTGAAGTAGCGGTGAT
TTTTCTGTCCAGGGTACGGAATATGGAGCACACCTGCGTAGTACACAAGT
GTATGTACTTTTGTTCTTTGGTGTACCCCTTGAAGCAGCAGCGCACGTCG
TCACACTGCCATGACCTTCATGCACAAAATGCACTCGATGAACCCACAAA
TGTTCGAGATGTGCCGCATGCTCAGCTTGACGCGTCTGGTTCGCTTTTCA
GGCCGCAGTCTACCTTCTTGCAGCAGTGGTTGGGATTTGCGGCTGTGTTG
AACCAATACTACTATACCATTAATAGGTATACACGAATGTAGAGATGTCG
CCCCAGTTGATCTTTAGCTGATAGGTTTCTTGTGAACGGTGAGCAGATCT
GATGCTCTTGATATATATTCTCCCCCCACTTGCCCGTCCCACTCTATCAC
TCCTTCATTTTGTGTGCCAGGTGGAAGAGGAGAGCATGGCGCTAGTGTAC
GAGATCGAGAAGATCGGGAGCCGAAGCGGCGCCCCGAGCGAAAAAGTCGA
GATCACCGACTCCGGAATGCTCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig6599:2083..6557+

>mRNA_M-pyrifera_M_contig6599.16021.1 ID=mRNA_M-pyrifera_M_contig6599.16021.1|Name=mRNA_M-pyrifera_M_contig6599.16021.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1212bp|location=Sequence derived from alignment at M-pyrifera_M_contig6599:2083..6557+ (Macrocystis pyrifera P11B4 male)
ATGGTGAACATGTTCAAGACTTTGGCGTTCGCAGCGGCAACGGTGTTCGG
CTTGGCTAATGCCGCTGACGACGTGACTGCGATGGTGAACATGTTCAAGA
CTTTGGCGTTCGCAGCGGCAACGGTGTTCGGCTTGGCTAATGCCGCTGAC
GACGTGACTGCGGTGACGCACAGGGTGTTCTTCGACATCAGCATCGCGGG
TGAGCCAAGGGGGCGCATTTCGATGGGCCTTTTTGGAAACGCTGTTCCCA
AGACGGTCGAGAACTTCAGGTGACGCACAGGGTGTTCTTCGACATCAGCA
TCGCGGGTGAGCCAAGGGGGCGCATTTCGATGGGCCTTTTTGGAAACGCT
GTTCCCAAGACGGTCGAGAACTTCAGGCAACTGTGCACCGGCGAGGCCGG
ACCGGGCAAGGTGTACCGCAAGCCCCTGCACTACAAGGGCTCTGCTTTCC
ACCGCATCATCCCGCAGGCAACTGTGCACCGGCGAGGCCGGACCGGGCAA
GGTGTACCGCAAGCCCCTGCACTACAAGGGCTCTGCTTTCCACCGCATCA
TCCCGCAGTTTATGCTCCAGGGGGGGGACTTCACCCACGGCACCGGCACC
GGCGGCGAGTCGATCTACGGTGGCAAGTTCGACGACGAGGCCTTCCTTTT
TATGCTCCAGGGGGGGGACTTCACCCACGGCACCGGCACCGGCGGCGAGT
CGATCTACGGTGGCAAGTTCGACGACGAGGCCTTCCTTCCCGAGCTGAAG
CACGACAAGCCTGGCGTGCTGTCCATGGCCAACGCCGGCAAGAACACGAA
CGGCTCCCAGTTCTTCATGTGCACCGTGCCGACCCCTTGGTTGGACGGCA
AGCACGTCATCTTCGGACAGCCCGAGCTGAAGCACGACAAGCCTGGCGTG
CTGTCCATGGCCAACGCCGGCAAGAACACGAACGGCTCCCAGTTCTTCAT
GTGCACCGTGCCGACCCCTTGGTTGGACGGCAAGCACGTCATCTTCGGAC
AGGTGGAAGAGGAGAGCATGGCGCTAGTGTACGAGATCGAGAAGATCGGG
AGCCGAAGCGGCGCCCCGAGCGAAAAAGTCGAGATCACCGACTCCGGAAT
GCTCTGAGTGGAAGAGGAGAGCATGGCGCTAGTGTACGAGATCGAGAAGA
TCGGGAGCCGAAGCGGCGCCCCGAGCGAAAAAGTCGAGATCACCGACTCC
GGAATGCTCTGA
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