mRNA_M-pyrifera_M_contig65970.16018.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig65970.16018.1 vs. uniprot
Match: UPI001ADFBC53 (alpha/beta hydrolase n=1 Tax=Roseomonas sp. SG15 TaxID=2820811 RepID=UPI001ADFBC53) HSP 1 Score: 63.2 bits (152), Expect = 6.740e-10 Identity = 37/74 (50.00%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 28 PVEDVDLTVLWDAMSAQRVLVIRGSESTILEEETAAKMVLGAEDTRTWVTIPEAGHAPSLYDDESCALITHFLS 249
PV DVDL +W + AQ +LVIRG+ES +L+E TAA M DTR V P GHAP+L D + A++ FLS
Sbjct: 213 PVVDVDLWPVWKTL-AQPILVIRGAESDLLDEATAAAMA-ARPDTRLAV-FPRCGHAPALIDSDQTAVVAEFLS 283
BLAST of mRNA_M-pyrifera_M_contig65970.16018.1 vs. uniprot
Match: A0A840Y4Q8_9PROT (Pimeloyl-ACP methyl ester carboxylesterase n=1 Tax=Roseomonas pecuniae TaxID=693023 RepID=A0A840Y4Q8_9PROT) HSP 1 Score: 59.3 bits (142), Expect = 1.780e-8 Identity = 36/73 (49.32%), Postives = 44/73 (60.27%), Query Frame = 1
Query: 31 VEDVDLTVLWDAMSAQRVLVIRGSESTILEEETAAKMVLGAEDTRTWVTIPEAGHAPSLYDDESCALITHFLS 249
+ DVDL +W+A+S VLV+RG+ES +LEE TAA+M T TIP GHAP L D LI FLS
Sbjct: 214 IADVDLWPVWEAVSPP-VLVLRGAESDLLEEGTAARMA--ERPGVTLATIPGCGHAPGLVDPVQTDLIVDFLS 283
BLAST of mRNA_M-pyrifera_M_contig65970.16018.1 vs. uniprot
Match: A0A317FCL0_9PROT (Alpha/beta hydrolase n=2 Tax=Falsiroseomonas bella TaxID=2184016 RepID=A0A317FCL0_9PROT) HSP 1 Score: 58.9 bits (141), Expect = 2.330e-8 Identity = 37/78 (47.44%), Postives = 45/78 (57.69%), Query Frame = 1
Query: 22 DKPVEDVDLTVLWDAMSAQRVLVIRGSESTILEEETAAKMVLGAEDTRTWV---TIPEAGHAPSLYDDESCALITHFL 246
D P VDL +W + LVIRG+ES IL+EETAA M TRT V T+P GHAP+L D AL++ FL
Sbjct: 206 DAPTGPVDLAAIWSLVRLP-TLVIRGAESDILDEETAADMA-----TRTGVELVTLPGIGHAPALMDPAQIALVSGFL 277
BLAST of mRNA_M-pyrifera_M_contig65970.16018.1 vs. uniprot
Match: UPI001E39056A (alpha/beta hydrolase n=2 Tax=Roseomonas TaxID=125216 RepID=UPI001E39056A) HSP 1 Score: 57.8 bits (138), Expect = 6.520e-8 Identity = 32/74 (43.24%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 28 PVEDVDLTVLWDAMSAQRVLVIRGSESTILEEETAAKMVLGAEDTRTWVTIPEAGHAPSLYDDESCALITHFLS 249
P+ DVDL +WDA++ VLV+RG+ES +L+E TAA+M V + GHAP+L + A+I FLS
Sbjct: 217 PIADVDLWPVWDALTPP-VLVLRGAESDLLDEATAARMA--TRPKTLLVNVAGCGHAPALMEHAQTAVIAEFLS 287
BLAST of mRNA_M-pyrifera_M_contig65970.16018.1 vs. uniprot
Match: A0A502GGG3_9PROT (Alpha/beta fold hydrolase n=1 Tax=Roseomonas nepalensis TaxID=1854500 RepID=A0A502GGG3_9PROT) HSP 1 Score: 57.4 bits (137), Expect = 8.910e-8 Identity = 31/74 (41.89%), Postives = 45/74 (60.81%), Query Frame = 1
Query: 28 PVEDVDLTVLWDAMSAQRVLVIRGSESTILEEETAAKMVLGAEDTRTWVTIPEAGHAPSLYDDESCALITHFLS 249
P D+DL +W+A++ +LV+RG+ES +L+E TAA+M A V + GHAP+L D A+I FLS
Sbjct: 215 PAADIDLWPVWEALTPP-ILVLRGAESDLLDEATAARMA--ARPKTLLVNVAGCGHAPALMDHAQTAVIAEFLS 285
BLAST of mRNA_M-pyrifera_M_contig65970.16018.1 vs. uniprot
Match: A0A1M6IK07_9PROT (Pimeloyl-ACP methyl ester carboxylesterase n=2 Tax=Roseomonas rosea TaxID=198092 RepID=A0A1M6IK07_9PROT) HSP 1 Score: 52.8 bits (125), Expect = 3.630e-6 Identity = 30/72 (41.67%), Postives = 41/72 (56.94%), Query Frame = 1
Query: 31 VEDVDLTVLWDAMSAQRVLVIRGSESTILEEETAAKMVLGAEDTRTWVTIPEAGHAPSLYDDESCALITHFL 246
+ D+DL +W+ + Q +LV+RG+ES +L+E TAA M A VTI GHAP L D A + FL
Sbjct: 181 ITDIDLWPVWETLR-QPILVLRGAESDLLDETTAAAMA--ARPGTRLVTITGCGHAPGLIDPAQTAALADFL 249
BLAST of mRNA_M-pyrifera_M_contig65970.16018.1 vs. uniprot
Match: A0A355WLI2_9RHOB (Alpha/beta hydrolase n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A355WLI2_9RHOB) HSP 1 Score: 52.0 bits (123), Expect = 7.260e-6 Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 37 DVDLTVLWDAMSAQRVLVIRGSESTILEEETAAKMVLGAEDTRTWVTIPEAGHAPSLYDDESCALITHFL 246
DVDL L+DAM+ + ++RG+ S++L EETAA+M D + +P+ H P L + E A+IT FL
Sbjct: 203 DVDLWPLFDAMTGLPLALLRGANSSLLTEETAAEMRRRRPDM-LFANVPDRAHIPFLDEPECLAIITAFL 271
BLAST of mRNA_M-pyrifera_M_contig65970.16018.1 vs. uniprot
Match: UPI001F2BD651 (alpha/beta hydrolase n=1 Tax=Roseomonas sp. NPKOSM-4 TaxID=2911368 RepID=UPI001F2BD651) HSP 1 Score: 52.0 bits (123), Expect = 7.400e-6 Identity = 32/72 (44.44%), Postives = 44/72 (61.11%), Query Frame = 1
Query: 40 VDLTVLWDAMSAQRVLVIRGSESTILEEETAAKMVLGAEDTRTWV---TIPEAGHAPSLYDDESCALITHFL 246
VDL ++W + A LV+RG+ES IL+EETAA+M + R V T+P GHAP+L D + A + FL
Sbjct: 213 VDLALVWSRV-ALPTLVLRGAESDILDEETAAEMAM-----RPGVRLETLPGIGHAPALTDPDQIARVLRFL 278
BLAST of mRNA_M-pyrifera_M_contig65970.16018.1 vs. uniprot
Match: A0A1I0B1F9_9PROT (Pimeloyl-ACP methyl ester carboxylesterase n=2 Tax=Nitrosomonas marina TaxID=917 RepID=A0A1I0B1F9_9PROT) HSP 1 Score: 51.2 bits (121), Expect = 1.440e-5 Identity = 28/71 (39.44%), Postives = 42/71 (59.15%), Query Frame = 1
Query: 34 EDVDLTVLWDAMSAQRVLVIRGSESTILEEETAAKMVLGAEDTRTWVTIPEAGHAPSLYDDESCALITHFL 246
+DVDL WD + A LVIRG++S +L+ ETA +M T + +P GHAP L D++ +++ FL
Sbjct: 225 DDVDLWQYWDMLQAP-TLVIRGTDSDVLQAETAVQMQQRG-PRATVIELPGIGHAPILLDNKQVSIVKDFL 293
BLAST of mRNA_M-pyrifera_M_contig65970.16018.1 vs. uniprot
Match: UPI001C203896 (alpha/beta hydrolase n=1 Tax=Falsiroseomonas tokyonensis TaxID=430521 RepID=UPI001C203896) HSP 1 Score: 50.1 bits (118), Expect = 3.610e-5 Identity = 36/85 (42.35%), Postives = 47/85 (55.29%), Query Frame = 1
Query: 7 LPLPEDK---PVEDVDLTVLWDAMSAQRVLVIRGSESTILEEETAAKMVL--GAEDTRTWVTIPEAGHAPSLYDDESCALITHFL 246
LPL E + P +DL +W A+ Q VL++RG+ES +LEE TAA M G E T+P GHAP+L + A I FL
Sbjct: 201 LPLAEAEKGAPSGPIDLRPIWQAVR-QPVLILRGAESDVLEEATAAAMAQRPGVE----LATLPGIGHAPALMAPDQVARILAFL 280 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65970.16018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig65970.16018.1 >prot_M-pyrifera_M_contig65970.16018.1 ID=prot_M-pyrifera_M_contig65970.16018.1|Name=mRNA_M-pyrifera_M_contig65970.16018.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=84bp PPLPLPEDKPVEDVDLTVLWDAMSAQRVLVIRGSESTILEEETAAKMVLGback to top mRNA from alignment at M-pyrifera_M_contig65970:932..1183- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig65970.16018.1 ID=mRNA_M-pyrifera_M_contig65970.16018.1|Name=mRNA_M-pyrifera_M_contig65970.16018.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=252bp|location=Sequence derived from alignment at M-pyrifera_M_contig65970:932..1183- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig65970:932..1183- >mRNA_M-pyrifera_M_contig65970.16018.1 ID=mRNA_M-pyrifera_M_contig65970.16018.1|Name=mRNA_M-pyrifera_M_contig65970.16018.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=504bp|location=Sequence derived from alignment at M-pyrifera_M_contig65970:932..1183- (Macrocystis pyrifera P11B4 male)back to top |