mRNA_M-pyrifera_M_contig65966.16013.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig65966.16013.1 vs. uniprot
Match: A0A7Y2N9K2_9ACTN (Tetratricopeptide repeat protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N9K2_9ACTN) HSP 1 Score: 184 bits (466), Expect = 3.200e-56 Identity = 86/151 (56.95%), Postives = 113/151 (74.83%), Query Frame = 1
Query: 1 VQDLVGLWLERRGRWSQAAKELQFCADMADSVEQHPVLADCHRALRHWDVVESLWADLGAASPGAELVEEGRIVYAGSLADQGKARDAIRLLETAPKAPNKPKEHHLRRWYALADLYERNGEQSRARRLFIEIDKLSPNYGDAAQRARQLR 453
V +L+GL R +W++A KEL ++ SV+QHPV+ADC+RA++ W VE +WA+LGA SP +VEEGRIVYAG+ ADQG+ +D IRLLE AP AP KPK HHLRRWYALADLYER+G+ +ARRLF I ++ P++GDA R+ L+
Sbjct: 60 VLELMGLCAYRMRQWAKAIKELTRVHELTGSVDQHPVIADCYRAMKKWAEVERIWAELGAQSPDPAVVEEGRIVYAGAKADQGRIQDGIRLLENAPAAPKKPKVHHLRRWYALADLYERSGQVGKARRLFATIARIDPHFGDAGHRSANLK 210
BLAST of mRNA_M-pyrifera_M_contig65966.16013.1 vs. uniprot
Match: UPI001E2D4ADF (hypothetical protein n=1 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E2D4ADF) HSP 1 Score: 172 bits (436), Expect = 2.060e-50 Identity = 89/151 (58.94%), Postives = 108/151 (71.52%), Query Frame = 1
Query: 1 VQDLVGLWLERRGRWSQAAKELQFCADMADSVEQHPVLADCHRALRHWDVVESLWADLGAASPGAELVEEGRIVYAGSLADQGKARDAIRLLETAPKAPNKPKEHHLRRWYALADLYERNGEQSRARRLFIEIDKLSPNYGDAAQRARQLR 453
V++L GL L R+ +W AAKEL+ +ADSVEQHPVLADC+RAL W +V+ LW +LGA SPGAE+V EGRIV AG+LADQG+ AI LL + K P PK+HHLRR YALADLYER GE RAR LF I + P++ D +R R LR
Sbjct: 162 VRELYGLTLYRQSKWKAAAKELEAFRLLADSVEQHPVLADCYRALGQWAMVDELWQELGAVSPGAEIVTEGRIVAAGALADQGQVVGAIDLLASGWKFPKNPKDHHLRRAYALADLYERAGEVPRARDLFGRIAGVDPDFADVERRLRALR 312
BLAST of mRNA_M-pyrifera_M_contig65966.16013.1 vs. uniprot
Match: A0A7Y2DNX5_9ACTN (Tetratricopeptide repeat protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DNX5_9ACTN) HSP 1 Score: 167 bits (423), Expect = 1.090e-49 Identity = 85/152 (55.92%), Postives = 105/152 (69.08%), Query Frame = 1
Query: 1 VQDLVGLWLERRGRWSQAAKELQFCADMADSVEQHPVLADCHRALRHWDVVESLWADLGAASPGAELVEEGRIVYAGSLADQGKARDAIRLLETAPKA-PNKPKEHHLRRWYALADLYERNGEQSRARRLFIEIDKLSPNYGDAAQRARQLR 453
V +L+GL R RW A KEL ++ SV+QHPV+ADCHRAL+ W VE W+ L ASP ++EEGRIV AG+ ADQG+ +DAIR+LE A + P KPK HHLR WYALADLYER G ARRLF +I SP++GDAA+RA L+
Sbjct: 60 VLELMGLCAYRTRRWKNAIKELGRFYELTGSVDQHPVVADCHRALKQWSAVEETWSQLADASPHPAILEEGRIVMAGAKADQGRLQDAIRVLENANLSRPKKPKIHHLRSWYALADLYERAGMVGNARRLFADIASASPDFGDAAKRAASLK 211
BLAST of mRNA_M-pyrifera_M_contig65966.16013.1 vs. uniprot
Match: A0A6N7FRA9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FRA9_9ACTN) HSP 1 Score: 166 bits (419), Expect = 1.980e-48 Identity = 83/150 (55.33%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 1 VQDLVGLWLERRGRWSQAAKELQFCADMADSVEQHPVLADCHRALRHWDVVESLWADLGAASPGAELVEEGRIVYAGSLADQGKARDAIRLLETAPKAPNKPKEHHLRRWYALADLYERNGEQSRARRLFIEIDKLSPNYGDAAQRARQL 450
++L GL L R GRW +AA+EL+ ++ S EQHPVLADC+RALR WD VE LW +L + SP AELV EGRIV +G+LAD+G+ DAIRLLE + P++P+E HLRR YALADLYER+G+ RAR LF + P++ D R R L
Sbjct: 113 ARELYGLALYRVGRWGEAARELEAFNALSGSAEQHPVLADCYRALRRWDEVERLWDELRSTSPSAELVTEGRIVASGALADRGRLPDAIRLLEQGFRLPDRPREFHLRRMYALADLYERSGDLPRARDLFRRVSAAEPDFFDVTTRVRGL 262
BLAST of mRNA_M-pyrifera_M_contig65966.16013.1 vs. uniprot
Match: A0A7K2A3Q2_9ACTN (Tetratricopeptide repeat protein n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2A3Q2_9ACTN) HSP 1 Score: 162 bits (411), Expect = 1.570e-47 Identity = 82/150 (54.67%), Postives = 105/150 (70.00%), Query Frame = 1
Query: 1 VQDLVGLWLERRGRWSQAAKELQFCADMADSVEQHPVLADCHRALRHWDVVESLWADLGAASPGAELVEEGRIVYAGSLADQGKARDAIRLLETAPKAPNKPKEHHLRRWYALADLYERNGEQSRARRLFIEIDKLSPNYGDAAQRARQL 450
+++L GL L R GR+ A EL++ +++ S EQHPVLADCHRAL W VE+LW +LGAASP AELV EGR+V AG+ AD+G+ AIR+LE K P++P++HHLRR YALADLYER G RAR LF ++ P D +QR R L
Sbjct: 88 IRELHGLVLYRLGRFKAAMGELEYFRELSGSTEQHPVLADCHRALGRWADVEALWKELGAASPSAELVTEGRLVLAGAKADRGELPAAIRVLEQGWKLPSRPRDHHLRRAYALADLYERAGRSPRARELFRWVESHDPRLADVSQRVRAL 237
BLAST of mRNA_M-pyrifera_M_contig65966.16013.1 vs. uniprot
Match: A0A6G0AB69_9ACTN (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0AB69_9ACTN) HSP 1 Score: 165 bits (417), Expect = 7.770e-47 Identity = 85/151 (56.29%), Postives = 106/151 (70.20%), Query Frame = 1
Query: 1 VQDLVGLWLERRGRWSQAAKELQFCADMAD-SVEQHPVLADCHRALRHWDVVESLWADLGAASPGAELVEEGRIVYAGSLADQGKARDAIRLLETAPKAPNKPKEHHLRRWYALADLYERNGEQSRARRLFIEIDKLSPNYGDAAQRARQL 450
+++L GL L R GRW AA++L+ ++ S EQHPVLADC RAL +WD VE LW +L ASPGAE+V EGRIV AG+ ADQG+ DAIRLLE + P KP+ HHLRR Y+LADLYER G+ RAR LF +I + P + DA+ RA L
Sbjct: 228 IRELYGLTLYRLGRWRAAARQLEAFGELTGGSTEQHPVLADCRRALGNWDEVERLWDELRRASPGAEVVNEGRIVAAGAKADQGRVADAIRLLEKGWRFPKKPRVHHLRRAYSLADLYERAGDTPRARALFSQIARSDPQFADASARATLL 378
BLAST of mRNA_M-pyrifera_M_contig65966.16013.1 vs. uniprot
Match: A0A6B0ZEF2_9ACTN (Tetratricopeptide repeat protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0ZEF2_9ACTN) HSP 1 Score: 161 bits (408), Expect = 9.000e-47 Identity = 84/150 (56.00%), Postives = 104/150 (69.33%), Query Frame = 1
Query: 1 VQDLVGLWLERRGRWSQAAKELQFCADMADSVEQHPVLADCHRALRHWDVVESLWADLGAASPGAELVEEGRIVYAGSLADQGKARDAIRLLETAPKAPNKPKEHHLRRWYALADLYERNGEQSRARRLFIEIDKLSPNYGDAAQRARQL 450
V +L GL L R GR+ A EL+ +++ SVEQHPVLADCHRAL W VE+LW +LGAASP AELV EGR+V AG+ AD+G+ AIR+LE + P++P+EHHLRR YALADLYER G RAR LF ++ +P D QR R L
Sbjct: 113 VSELHGLVLYRLGRFRAAMGELEAFRELSGSVEQHPVLADCHRALGRWADVEALWKELGAASPSAELVTEGRLVLAGAKADRGELPAAIRVLEQGWRLPSRPREHHLRRAYALADLYERAGRSPRARELFRWVETHNPQLADVTQRVRAL 262
BLAST of mRNA_M-pyrifera_M_contig65966.16013.1 vs. uniprot
Match: UPI001AA04366 (hypothetical protein n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA04366) HSP 1 Score: 159 bits (403), Expect = 3.660e-46 Identity = 80/151 (52.98%), Postives = 101/151 (66.89%), Query Frame = 1
Query: 1 VQDLVGLWLERRGRWSQAAKELQFCADMADSVEQHPVLADCHRALRHWDVVESLWADLGAASPGAELVEEGRIVYAGSLADQGKARDAIRLLETAPKAPNKPKEHHLRRWYALADLYERNGEQSRARRLFIEIDKLSPNYGDAAQRARQLR 453
+++L GL L R GRW A +EL+ + S EQHPVLADCHRAL HW V+ LW +L A+P EL+ EGRIV AG+LAD+G R AI +LE + P PK HHLRR YALADLYER G+ +R+R LF I + +P++ D R R LR
Sbjct: 101 IRELYGLTLYRLGRWRSAIRELEAFETLTASTEQHPVLADCHRALGHWVTVDELWEELRRAAPSPELLTEGRIVTAGALADRGDLRTAIGMLEEGFRYPRSPKIHHLRRVYALADLYERAGDLARSRELFGRIQRDAPDFADVEDRVRALR 251
BLAST of mRNA_M-pyrifera_M_contig65966.16013.1 vs. uniprot
Match: A0A6N9EX34_9ACTN (Tetratricopeptide repeat protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EX34_9ACTN) HSP 1 Score: 160 bits (405), Expect = 4.740e-46 Identity = 81/150 (54.00%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 1 VQDLVGLWLERRGRWSQAAKELQFCADMADSVEQHPVLADCHRALRHWDVVESLWADLGAASPGAELVEEGRIVYAGSLADQGKARDAIRLLETAPKAPNKPKEHHLRRWYALADLYERNGEQSRARRLFIEIDKLSPNYGDAAQRARQL 450
V++L GL L R GR+ A EL++ +++ SVEQHPVLADCHRAL W VE+LW +LGAASP AELV EGR+V AG+ AD+G+ AI++LE K P++P++HHLRR YALADLYE+ G RAR LF ++ P D ++R R L
Sbjct: 136 VRELHGLVLYRLGRFKAAMGELEYFRELSGSVEQHPVLADCHRALGRWADVEALWRELGAASPSAELVTEGRLVLAGAKADRGELPAAIKVLEQGWKLPSRPRDHHLRRAYALADLYEKAGRPPRARELFRWVETHDPRLADVSERVRAL 285
BLAST of mRNA_M-pyrifera_M_contig65966.16013.1 vs. uniprot
Match: A0A6J6HF68_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J6HF68_9ZZZZ) HSP 1 Score: 157 bits (397), Expect = 7.400e-46 Identity = 81/150 (54.00%), Postives = 103/150 (68.67%), Query Frame = 1
Query: 1 VQDLVGLWLERRGRWSQAAKELQFCADMADSVEQHPVLADCHRALRHWDVVESLWADLGAASPGAELVEEGRIVYAGSLADQGKARDAIRLLETAPKAPNKPKEHHLRRWYALADLYERNGEQSRARRLFIEIDKLSPNYGDAAQRARQL 450
V++L G+ L R+ +W AA+EL+ +ADS EQ+PVLADC+RALR W V+ LW +L SP AELV EGRIV AGSLAD+G+ +A +LLE P KPK HHLRR YALADLYER GE +AR LF ++ P++ D +R R L
Sbjct: 53 VRELYGITLYRQEKWKAAARELEAFRLLADSTEQNPVLADCYRALRQWPQVDELWLELRQVSPTAELVGEGRIVMAGSLADRGQIVEATKLLEQGWSFPKKPKPHHLRRAYALADLYERGGEIPKARALFEKLRIADPDFADVRERLRAL 202 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65966.16013.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig65966.16013.1 >prot_M-pyrifera_M_contig65966.16013.1 ID=prot_M-pyrifera_M_contig65966.16013.1|Name=mRNA_M-pyrifera_M_contig65966.16013.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp VQDLVGLWLERRGRWSQAAKELQFCADMADSVEQHPVLADCHRALRHWDVback to top mRNA from alignment at M-pyrifera_M_contig65966:2..457+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig65966.16013.1 ID=mRNA_M-pyrifera_M_contig65966.16013.1|Name=mRNA_M-pyrifera_M_contig65966.16013.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig65966:2..457+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig65966:2..457+ >mRNA_M-pyrifera_M_contig65966.16013.1 ID=mRNA_M-pyrifera_M_contig65966.16013.1|Name=mRNA_M-pyrifera_M_contig65966.16013.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=912bp|location=Sequence derived from alignment at M-pyrifera_M_contig65966:2..457+ (Macrocystis pyrifera P11B4 male)back to top |