mRNA_M-pyrifera_M_contig65861.15995.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig65861.15995.1 vs. uniprot
Match: A0A2E7K6U0_9PLAN (Uncharacterized protein n=4 Tax=Gimesia TaxID=1649453 RepID=A0A2E7K6U0_9PLAN) HSP 1 Score: 262 bits (670), Expect = 2.150e-88 Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 1
Query: 1 MDRIALSLIAVLLIGFAVLLVTPQDQKSASTQTVKIQRHTIELDRVENVRVTPNGTLRFSHNNGNHLQQTQYFINLYAGNVTVVQDAEFARDRIQLTDTLVGGLQITLSRSHALDLEQYTVSEDDLAHTISKSVIETSAESR 426
MDRIALSLIAVLLIGFAVLLVTPQDQKSASTQTVK+QRHTIEL+RVENVRVTPNGTLRFSHNNGNHLQQTQYFINLYAGNVTVVQDAEFARDRIQLTDTLVGGLQITLSRSHALDLEQYTVSEDDLAHTISKSVIETSAESR
Sbjct: 1 MDRIALSLIAVLLIGFAVLLVTPQDQKSASTQTVKLQRHTIELERVENVRVTPNGTLRFSHNNGNHLQQTQYFINLYAGNVTVVQDAEFARDRIQLTDTLVGGLQITLSRSHALDLEQYTVSEDDLAHTISKSVIETSAESR 142
BLAST of mRNA_M-pyrifera_M_contig65861.15995.1 vs. uniprot
Match: A0A5A8B1I4_9PLAN (Uncharacterized protein n=3 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A5A8B1I4_9PLAN) HSP 1 Score: 216 bits (550), Expect = 4.210e-70 Identity = 116/141 (82.27%), Postives = 123/141 (87.23%), Query Frame = 1
Query: 1 MDRIALSLIAVLLIGFAVLLVTPQDQKSASTQTVKIQRHTIELDRVENVRVTPNGTLRFSHNNGNHLQQTQYFINLYAGNVTVVQDAEFARDRIQLTDTLVGGLQITLSRSHALDLEQYTVSEDDLAHTISKSVIETSAES 423
MDRIALSLIAVLLIGFAVLLVTPQDQKS STQTVK+QRHTIEL+RVENVRVTPNGTLRFSHNNGNHLQQTQYFINLYAGNVTV+QDAEFARDRIQLTDTLVGGLQITLSRSH L+L+ + H S+ E SA S
Sbjct: 1 MDRIALSLIAVLLIGFAVLLVTPQDQKSTSTQTVKLQRHTIELERVENVRVTPNGTLRFSHNNGNHLQQTQYFINLYAGNVTVIQDAEFARDRIQLTDTLVGGLQITLSRSHTLELDYLEAPYEAPVHNFSELFSEVSAHS 141
BLAST of mRNA_M-pyrifera_M_contig65861.15995.1 vs. uniprot
Match: A0A518ACR9_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518ACR9_9PLAN) HSP 1 Score: 173 bits (438), Expect = 5.950e-53 Identity = 96/148 (64.86%), Postives = 117/148 (79.05%), Query Frame = 1
Query: 1 MDRIALSLIAVLLIGFAVLLVTPQD------QKSASTQTVKIQRHTIELDRVENVRVTPNGTLRFSHNNG-NHLQQTQYFINLYAGNVTVVQDAEFARDRIQLTDTLVGGLQITLSRSHALDLEQYTVSEDDLAHTISKSVIETSAES 423
MDRIA SL+A+LLI A+L V PQD QKSA QTVKIQRHTIEL+RVENVR+TP G LRFS ++G NHL++ YFINL NVT+V+D EFA+DRIQ++DT++GGLQITL+ SH LDLE YT S++ L+H +S S IETSAES
Sbjct: 1 MDRIAFSLLAILLILIAILFVVPQDKVTSQRQKSADPQTVKIQRHTIELERVENVRITPEGILRFSGDDGGNHLRRMHYFINLNTANVTLVEDDEFAKDRIQMSDTIIGGLQITLASSHELDLEGYTASDNALSHNLSASFIETSAES 148
BLAST of mRNA_M-pyrifera_M_contig65861.15995.1 vs. uniprot
Match: A0A2E7KEQ5_9PLAN (Uncharacterized protein n=7 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KEQ5_9PLAN) HSP 1 Score: 89.0 bits (219), Expect = 5.500e-20 Identity = 49/122 (40.16%), Postives = 81/122 (66.39%), Query Frame = 1
Query: 1 MDRIALSLIAVLLIGFAVLLVTPQDQKSASTQ--TVKIQRHTIELDRVENVRVTPNGTLRFSHNNGNHLQQTQYFINLYAGNVTVVQDAEFARDRIQLTDTLVGGLQITLSRSHALDLEQYT 360
M+++ LS I L+I A+L + P+D++ Q +V+I+RH +L V +V++TP G L+ S+ + + +FINL +GNV +V+D EFA +R+ LTDTL GGL++T+++S L+L T
Sbjct: 1 MEKVTLSAIIFLVILIAILFIAPEDEQGDGPQESSVEIKRHASDLMNVHDVKITPEGVLQMSYLDETGFLTSHHFINLKSGNVILVEDEEFAPERVMLTDTLHGGLKVTVAKSLNLNLPPST 122
BLAST of mRNA_M-pyrifera_M_contig65861.15995.1 vs. uniprot
Match: A0A518FWQ8_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FWQ8_9PLAN) HSP 1 Score: 84.7 bits (208), Expect = 2.480e-18 Identity = 49/122 (40.16%), Postives = 78/122 (63.93%), Query Frame = 1
Query: 1 MDRIALSLIAVLLIGFAVLLVTPQDQK--SASTQTVKIQRHTIELDRVENVRVTPNGTLRFSHNNGNHLQQTQYFINLYAGNVTVVQDAEFARDRIQLTDTLVGGLQITLSRSHALDLEQYT 360
M+++ LS I L+I A+L +TP D + Q V++ RH+ +L V +V++TP G L+ S+ + + +FINL +GNV +V+D EF +RI LTDTL GGL++T+++S L+L T
Sbjct: 1 MEKVTLSAIIFLVILIAILFITPDDAQRDGQQGQGVEMMRHSSDLMNVHDVKITPEGVLQMSYVDETGYLTSHHFINLKSGNVILVEDEEFEPERIMLTDTLHGGLKVTVAKSLNLNLPPST 122
BLAST of mRNA_M-pyrifera_M_contig65861.15995.1 vs. uniprot
Match: A0A518IGE0_9PLAN (Uncharacterized protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IGE0_9PLAN) HSP 1 Score: 79.3 bits (194), Expect = 3.360e-16 Identity = 45/128 (35.16%), Postives = 78/128 (60.94%), Query Frame = 1
Query: 1 MDRIALSLIAVLLIGFAVLLVTPQDQKSA--STQTVKIQRHTIELDRVENVRVTPNGTLRFSHNNGNHLQQTQYFINLYAGNVTVVQDAEFARDRIQLTDTLVGGLQITLSRSHALDLEQYTVSEDDL 378
M+++AL I L+I A+L + P +Q Q ++IQRH+ +L V+++ VT G L ++ + L+ +F+NL A NV +V+D EF ++I ++DT GGL+IT+++S L+L + + D L
Sbjct: 1 MEKVALCAIIFLVILIAILFIVPNEQMDGPQQPQIIEIQRHSSDLINVQDILVTSEGLLCITYADETGLRTFHHFVNLKASNVILVEDEEFEPEKILISDTFHGGLEITVAKSLNLNLSPFATNSDSL 128 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65861.15995.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig65861.15995.1 >prot_M-pyrifera_M_contig65861.15995.1 ID=prot_M-pyrifera_M_contig65861.15995.1|Name=mRNA_M-pyrifera_M_contig65861.15995.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=143bp MDRIALSLIAVLLIGFAVLLVTPQDQKSASTQTVKIQRHTIELDRVENVRback to top mRNA from alignment at M-pyrifera_M_contig65861:876..1304- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig65861.15995.1 ID=mRNA_M-pyrifera_M_contig65861.15995.1|Name=mRNA_M-pyrifera_M_contig65861.15995.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=429bp|location=Sequence derived from alignment at M-pyrifera_M_contig65861:876..1304- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig65861:876..1304- >mRNA_M-pyrifera_M_contig65861.15995.1 ID=mRNA_M-pyrifera_M_contig65861.15995.1|Name=mRNA_M-pyrifera_M_contig65861.15995.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=858bp|location=Sequence derived from alignment at M-pyrifera_M_contig65861:876..1304- (Macrocystis pyrifera P11B4 male)back to top |