mRNA_M-pyrifera_M_contig65824.15989.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig65824.15989.1
Unique NamemRNA_M-pyrifera_M_contig65824.15989.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig65824.15989.1 vs. uniprot
Match: A0A812LS50_9DINO (AP-3 complex subunit beta n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LS50_9DINO)

HSP 1 Score: 317 bits (813), Expect = 5.740e-97
Identity = 185/362 (51.10%), Postives = 232/362 (64.09%), Query Frame = 1
Query:    1 EKIRSLLDNAAVGTSSSTAMAGKAEGMKYLLAMTAKGRDVSSFYADVVKNVVVKDSEVKKLVYMFLVRYADANKDCRELALMAINSFQRDQSDSNPLIRAGALRVMANIRVREIVPIQIMAVKKSAYDTSPYVRKVAAHACCKVFHLDPSTIGELEPVVTRLLADKNVTVLSSAVQAYVEIFPDRLDMIHEEYRKLVGCLPDMDEWGQVTTLNMLVRYARTQFTDPSKATAAVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGPDVHEDG---LDKDHKLLLDASRPLLASRNTGVVLAVAMVHHYLAPPSRFEDSRVGRALVRVMRNHREVTWVVLQTIRELAARSPGMF 1077
            E+IR LL+ ++  T S T +  K EGMKYLLA  +KGRDV+ +YADVV+NV+VK  +VKKLVY +LV +ADAN+ CR LAL+AIN+FQ+D S+ N LIRA ALRVM  IRVR+I+PIQ+MAVKK+A+DTS YVRKV+A    KV  ++ ST+ EL  VV RLL D++  VLSSA+  + E+ P R DM+H  YRKL   L D+DEWGQ+  L +L  YARTQF DP     A+ EA                                     G  + +DG   LD DH LLL A+ PLL SR+TGVVLAVA V+  LAP SR    +VG AL R MRNHREV +++L  I  LA  +PGMF
Sbjct:   16 ERIRELLNKSS--TESRTGVIEKTEGMKYLLAQMSKGRDVAEYYADVVRNVIVKSVDVKKLVYTYLVYHADANETCRGLALLAINTFQKDLSNRNELIRALALRVMCGIRVRDIIPIQVMAVKKAAFDTSAYVRKVSALCIPKVTAMEASTVPELTDVVERLLHDRSTIVLSSAIFCWREVCPARYDMLHSVYRKLCHTLADLDEWGQIVALQVLTEYARTQFVDPRTGAVALREAAAVRKATRSKKPKRKKSGFYSDDSSVTASDVEEDESGG--LVDDGDVALDADHDLLLRAAVPLLRSRSTGVVLAVADVYSTLAPRSRDTSIKVGEALTRAMRNHREVQYLLLSNIVSLAKEAPGMF 373          
BLAST of mRNA_M-pyrifera_M_contig65824.15989.1 vs. uniprot
Match: A0A5A8DGJ5_CAFRO (AP complex subunit beta n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8DGJ5_CAFRO)

HSP 1 Score: 305 bits (780), Expect = 1.240e-93
Identity = 174/362 (48.07%), Postives = 221/362 (61.05%), Query Frame = 1
Query:    1 EKIRSLLDNAAVGTSSSTAMAGKAEGMKYLLAMTAKGRDVSSFYADVVKNVVVKDSEVKKLVYMFLVRYADANKDCRELALMAINSFQRDQSDSNPLIRAGALRVMANIRVREIVPIQIMAVKKSAYDTSPYVRKVAAHACCKVFHLDPSTIGELEPVVTRLLADKNVTVLSSAVQAYVEIFPDRLDMIHEEYRKLVGCLPDMDEWGQVTTLNMLVRYARTQFTDPSKATAAVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGPDVHED---GLDKDHKLLLDASRPLLASRNTGVVLAVAMVHHYLAPPSRFEDSRVGRALVRVMRNHREVTWVVLQTIRELAARSPGMF 1077
            ++I+ LLD +    S++  +  K +GMK+L+AM AKGRDVS FYADVV+NVV KD E+KKL YMFL  YAD +  CRELALMA+ S+Q+D    N L+R  ALRV+ +IRVREIVPIQ++  KK   D SPYVRKV   A  K++ LDP+   +L  ++  LL DK V VLSSA+ AY ++ PDR +++H  YRKL   + D+DEW Q+T LN+L RYARTQFTDP +  +   +A                                          ED    LD DH LL+ A+ PLL SRN GVVLAVA V+HYLAP SR     VGR LVR MR HRE  ++VL +I +LA   P MF
Sbjct:   20 DRIKKLLDPS---PSATAGLKEKIQGMKHLIAMMAKGRDVSEFYADVVRNVVTKDVELKKLAYMFLSHYADHSAQCRELALMAVASYQKDMEQHNALVRGMALRVLCSIRVREIVPIQLIGAKKLMRDMSPYVRKVCTLALTKIYSLDPTVKEDLVDILDVLLNDKAVAVLSSAIAAYSDVCPDRPEVLHRHYRKLCTVVADLDEWAQITALNVLTRYARTQFTDPRRTLSDADKAALDAARAARSAKAKAKPARRAGFYSDDEDETDSAPEDFAATVEDDASSLDADHALLIRAAIPLLKSRNAGVVLAVAGVYHYLAPRSRAHAEMVGRGLVRAMRGHRETQYIVLTSIVKLAGEYPEMF 378          
BLAST of mRNA_M-pyrifera_M_contig65824.15989.1 vs. uniprot
Match: A0A7S2DHK3_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHK3_9STRA)

HSP 1 Score: 294 bits (753), Expect = 6.540e-87
Identity = 165/353 (46.74%), Postives = 218/353 (61.76%), Query Frame = 1
Query:   67 KAEGMKYLLAMTAKGRDVSSFYADVVKNVVVKDSEVKKLVYMFLVRYADANKDCRELALMAINSFQRDQSDSNPLIRAGALRVMANIRVREIVPIQIMAVKKSAYDTSPYVRKVAAHACCKVFHLDPSTIGELEPVVTRLLADKNVTVLSSAVQAYVEIFPDRLDMIHEEYRKLVGCLPDMDEWGQVTTLNMLVRYARTQFTDPSKATAAVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP----------------AGPDVHEDGLDKDHKLLLDASRPLLASRNTGVVLAVAMVHHYLAPPSRFEDSRVGRALVRVMRNHREVTWVVLQTIRELAARSPGMF 1077
            KA+GMK+LLAM +KGRD S F++DVVKNVVVK  EVKK+VYM+LV YADAN +CRELAL++INSFQ+D + SN L+RA ALRVM++IRV EI+ IQ++AVKK A D+SPYVRK AA+A  K+++L       L+ ++ +LL D +  VL SAV A+ E+ PD  D++H  YRKL   L D+DEW Q+T LN+L RY R QFTDP+   +  A+A                                                    AG    E  LD DH+LLL +S PLL SRN+GVVLA+  +H+Y    S    + +G+ALVR++RN RE+ +VVLQ I  +A   P +F
Sbjct:   58 KAKGMKWLLAMLSKGRDASDFFSDVVKNVVVKSVEVKKMVYMYLVHYADANANCRELALLSINSFQKDLAASNQLVRAMALRVMSSIRVPEIIQIQLLAVKKCASDSSPYVRKCAANAIPKIYNLGNEQQEPLKQIIEKLLRDSSCMVLGSAVAAFSEVCPDSWDILHRAYRKLCHLLADVDEWAQITILNVLTRYLRAQFTDPAPGMSDAAKAQAQQRSGAGAMAAPKRVKRRIVKKAFYSDEEDESQEEDIEIPSKAEAGSVFTAGDQETEGELDPDHRLLLRSSLPLLKSRNSGVVLAICSLHYYCGTQSARTGAALGKALVRILRNAREIQFVVLQAIATMATERPHLF 410          
BLAST of mRNA_M-pyrifera_M_contig65824.15989.1 vs. uniprot
Match: A0A6A5AKY0_9STRA (Adaptin_N domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AKY0_9STRA)

HSP 1 Score: 272 bits (696), Expect = 1.760e-84
Identity = 172/397 (43.32%), Postives = 226/397 (56.93%), Query Frame = 1
Query:    1 EKIRSLLDNAAVGTSSSTAMAGKAEGMKYLLAMTAKGRDVSSFYADVVKNVVVKDSEVKKLVYMFLVRYADANKDCRELALMAINSFQRDQSDSNPLIRAGALRVMANIRVREIVPIQIMAVKKSAYDTSPYVRKVAAHACCKVFHLDPSTIGE-LEPVVTRLLADKNVTVLSSAVQAYVEIFPDRLDMIHEEYRKLVGCLPDMDEWGQVTTLNMLVRYARTQF-------TDPSKATAAVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGPDVHEDG------------------------------LDKDHKLLLDASRPLLASRNTGVVLAVAMVHHYLAPPSRFEDSRVGRALVRVMRNHREVTWVVLQTIRELAARSPGMF 1077
            E+I+ LLDN   GT+    ++ K + MK LLAM +KG DVS F+ADVVKNV+V   EVKK+VYM+LV YADAN  CRELAL++INSFQ+D +D N LIRA ALRVM +IRVR+I+ IQ++A++K A D+SPYVRK AA+A  KV  +D +   E L  +++ LLAD +  VL SAVQA  EI PDR+D++H  +RKL   L D+DEWGQ   +++L RY R QF       T PSK   A  +                                      G      G                              LD+DH+LLL +S PLL SRN+ VVLAV+ +H+Y    S    + +G++LVR+MRN RE+ +VVL  I  +AA  P MF
Sbjct:   20 ERIKKLLDNK-TGTAG---VSEKLQAMKTLLAMISKGEDVSLFFADVVKNVIVNSVEVKKMVYMYLVHYADANAQCRELALLSINSFQKDLADPNQLIRALALRVMTSIRVRDILQIQLIAIRKCAGDSSPYVRKCAANALSKVHLMDSTDQKEVLAEIISLLLADSSTMVLGSAVQALNEICPDRMDLLHPAFRKLCHLLADIDEWGQAVVIHVLTRYCRQQFQSPKQEDTLPSKQGNAAVKELFPKRKVKKGFYSDEEDDPKAKSYSSNGPKTSNPFHLGTSSGGGGGFGASKEHVPSIGSVFRSNDVASGIGGGEELDEDHRLLLRSSIPLLKSRNSAVVLAVSTLHYYCGTQSSATCTLLGKSLVRIMRNQREIQFVVLSVIASMAAARPDMF 412          
BLAST of mRNA_M-pyrifera_M_contig65824.15989.1 vs. uniprot
Match: A0A8K1FJB0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJB0_PYTOL)

HSP 1 Score: 286 bits (731), Expect = 2.910e-84
Identity = 171/389 (43.96%), Postives = 231/389 (59.38%), Query Frame = 1
Query:    1 EKIRSLLDNAAVGTSSSTAMAGKAEGMKYLLAMTAKGRDVSSFYADVVKNVVVKDSEVKKLVYMFLVRYADANKDCRELALMAINSFQRDQSDSNPLIRAGALRVMANIRVREIVPIQIMAVKKSAYDTSPYVRKVAAHACCKVFHLDPSTIGELEPVVTRLLADKNVTVLSSAVQAYVEIFPDRLDMIHEEYRKLVGCLPDMDEWGQVTTLNMLVRYARTQF------------------------------TDPSKATAAVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGPDVHEDGLDKDHKLLLDASRPLLASRNTGVVLAVAMVHHYLAPPSRFEDSRVGRALVRVMRNHREVTWVVLQTIRELAARSPGMF 1077
            ++IR LLDN  +G +  +    K E MK LLA  +KG DVS F+ADVVKNV+V   EVKKLVYM+LV YADAN  CRELAL++INSFQ+D +D N LIRA ALRVM +IRVR+I+ IQ++A++K A D+SPYVRK AA+A  KVF +DP     L  ++ +LL+D +  VL SAVQA+ E+ PDRLD++H  +RK+   L D+DEWGQV T+N+L+RY R QF                              +D  + + +  EA                                    +G    E+ LD+DH+LLL +S PLL SRN+ VVLAVA +H+Y    S   ++ +G++LVR+MRN RE+ +VVL  I  ++   P MF
Sbjct:   20 DRIRKLLDNK-LGVAGHSE---KLEAMKALLASISKGEDVSMFFADVVKNVIVASVEVKKLVYMYLVHYADANAQCRELALLSINSFQKDLADGNQLIRALALRVMTSIRVRDIMQIQLIAIRKCAADSSPYVRKCAANALSKVFVVDPEQKDVLAEIIGKLLSDSSTMVLGSAVQAFNEVCPDRLDLLHRPFRKICHLLADIDEWGQVATINVLIRYCREQFQTPEVLSQEEPGRKDTKNLFPKRKTKRGFYSDDERDSDSDREANQHKSTQPSPFHLGSNPVRGEVLPSIGSVFRSNAIVSGFSGGEE-LDEDHRLLLRSSIPLLKSRNSAVVLAVATLHYYCGTHSVATNTLIGKSLVRIMRNQREIQFVVLSVISSMSISRPAMF 403          
BLAST of mRNA_M-pyrifera_M_contig65824.15989.1 vs. uniprot
Match: A0A225VXH3_9STRA (AP-3 complex subunit beta n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VXH3_9STRA)

HSP 1 Score: 280 bits (717), Expect = 6.770e-84
Identity = 171/383 (44.65%), Postives = 219/383 (57.18%), Query Frame = 1
Query:    1 EKIRSLLDNAAVGTSSSTAMAGKAEGMKYLLAMTAKGRDVSSFYADVVKNVVVKDSEVKKLVYMFLVRYADANKDCRELALMAINSFQRDQSDSNPLIRAGALRVMANIRVREIVPIQIMAVKKSAYDTSPYVRKVAAHACCKVFHLDPSTIGELEPVVTRLLADKNVTVLSSAVQAYVEIFPDRLDMIHEEYRKLVGCLPDMDEWGQVTTLNMLVRYARTQFTDP--------------SKATAAVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGPDVHEDGL----------DKDHKLLLDASRPLLASRNTGVVLAVAMVHHYLAPPSRFEDSRVGRALVRVMRNHREVTWVVLQTIRELAARSPGMF 1077
            ++IR LLDN  +G +  +    K E MK LLA  +KG DVS F+ADVVKNV+V   EVKKLVYM+LV YADAN  CRELAL++INSFQ+D +D N LIRA ALRVM +IRVR+I+ IQ++A++K A D S YVRK A +A  KVF +DP     L  ++  LL D +  VL SAVQA  E+ PDRLD++H+ +RKL   L D+DEWGQ  TLN+L+RY R QF  P              SK      +                                      G     D L          D+DH+LLL +S PLL SRN+ VVLAVA +H+Y    S    + +G++LVR+MRN RE+ +VVL  I  +A   P MF
Sbjct:   24 DRIRKLLDNK-LGVAGHSE---KLEAMKALLASISKGEDVSMFFADVVKNVIVASVEVKKLVYMYLVHYADANSQCRELALLSINSFQKDLADQNQLIRALALRVMTSIRVRDILQIQLIAIRKCAADESAYVRKCATNAISKVFAVDPDQKDVLAEIIGTLLNDSSTMVLGSAVQALNEVCPDRLDLLHQPFRKLCHLLADIDEWGQTVTLNVLIRYCREQFQAPEVMKEEKNMFPKRKSKQGFYSDDEASDDEKKEFLKNQGTSFSNKSPFMLGGNVRGETLPSIGSVFRSDALASGIGGGEELDEDHRLLLRSSIPLLKSRNSAVVLAVATLHYYCGTHSMATSTLIGKSLVRIMRNQREIQYVVLSVISSMATSRPDMF 402          
BLAST of mRNA_M-pyrifera_M_contig65824.15989.1 vs. uniprot
Match: A0A7S2SUN3_9STRA (AP-3 complex subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUN3_9STRA)

HSP 1 Score: 283 bits (724), Expect = 4.550e-83
Identity = 165/358 (46.09%), Postives = 215/358 (60.06%), Query Frame = 1
Query:   67 KAEGMKYLLAMTAKGRDVSSFYADVVKNVVVKDSEVKKLVYMFLVRYADANKDCRELALMAINSFQRDQSDSNPLIRAGALRVMANIRVREIVPIQIMAVKKSAYDTSPYVRKVAAHACCKVFHLDPSTIGELEPVVTRLLADKNVTVLSSAVQAYVEIFPDRLDMIHEEYRKLVGCLPDMDEWGQVTTLNMLVRYARTQFTDPSKATAAVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------PAGPDVHE---------DG-LDKDHKLLLDASRPLLASRNTGVVLAVAMVHHYLAPPSRFEDSRVGRALVRVMRNHREVTWVVLQTIRELAARSPGMF 1077
            KA+GMK+LLAM +KG D S F++DVVKNV VK  EVKK+VYM+LV YADAN  CRELAL++INSFQ+D + SN L+RA ALRVM++IRV EI+ IQ++AVKK A D+SPYVRK AA+A  K+F LD      LE +V +LL+D +  VL  AV A+ E+ PD+  ++H  +RKL   L D+DEW Q+T L +L RY RTQF DP+      A                                                PA P++           DG LD DH+LLL +S PLL SRN+GVVLAV  +H+Y    S    + VG+ALVR++RN RE+ +VVL+ I  +A   P +F
Sbjct:   58 KAKGMKWLLAMMSKGSDASEFFSDVVKNVAVKGVEVKKMVYMYLVHYADANATCRELALLSINSFQKDLAASNQLVRAMALRVMSSIRVPEIIQIQLLAVKKCASDSSPYVRKCAANAIPKIFRLDREQREALEDLVEKLLSDSSCMVLGGAVAAFNEVCPDKWTILHRSFRKLCHLLADVDEWAQITILQVLTRYLRTQFGDPAPGMTEAARIRAQQRSQAGALAAPRKIKRRVVKKAFYSDEEDESQEEEVEVGGFGSPAQPEIGSVFTGGDQDTDGNLDPDHRLLLRSSLPLLKSRNSGVVLAVCTLHYYCGSQSSSTAASVGKALVRILRNAREIQFVVLKAIATMARERPQIF 415          
BLAST of mRNA_M-pyrifera_M_contig65824.15989.1 vs. uniprot
Match: A0A0P1ACX9_PLAHL (Ap-3 complex subunit n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ACX9_PLAHL)

HSP 1 Score: 284 bits (726), Expect = 7.130e-83
Identity = 172/369 (46.61%), Postives = 221/369 (59.89%), Query Frame = 1
Query:    1 EKIRSLLDNAAVGTSSSTAMAGKAEGMKYLLAMTAKGRDVSSFYADVVKNVVVKDSEVKKLVYMFLVRYADANKDCRELALMAINSFQRDQSDSNPLIRAGALRVMANIRVREIVPIQIMAVKKSAYDTSPYVRKVAAHACCKVFHLDPSTIGELEPVVTRLLADKNVTVLSSAVQAYVEIFPDRLDMIHEEYRKLVGCLPDMDEWGQVTTLNMLVRYARTQFTDP--SKATAAVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGPDVHE---------DGLDKDHKLLLDASRPLLASRNTGVVLAVAMVHHYLAPPSRFEDSRVGRALVRVMRNHREVTWVVLQTIRELAARSPGM 1074
            ++IR LLDN  +G +  +    K E MK LLA  +KG DVS F+ADVVKNV+V   EVKKLVYM+LV YADAN  CRELAL++INSFQ+D +D N LIRA ALRVM +IRVR+IV IQ++A++K A D S YVRK A +A  KVF LDP     L  ++  LL D +  VLSSAVQA  E+ PDRLD++H  +RKL   L D+DEWGQ  TL++L+RY R +F  P   K   A  +                                    P+   V           + LD+DH+LLL +S PLL SRN+GVVLAVA +H+Y    S    + +G++LVR+MRN RE+ +VVL  I  +A   P M
Sbjct:   24 DRIRKLLDNK-LGVAGHSE---KLEAMKALLASISKGEDVSPFFADVVKNVIVASVEVKKLVYMYLVHYADANAQCRELALLSINSFQKDLADPNQLIRALALRVMTSIRVRDIVQIQLIAIRKCAADESAYVRKCATNAISKVFALDPEQKDVLAEIIGNLLNDPSTMVLSSAVQALNEVCPDRLDLLHRPFRKLCHLLADVDEWGQTVTLHVLLRYCRQEFQAPVIEKKELAHKKKNKKGFYSDEGSASDNEESNLMKKQSPFMLGKGNEQPSIGSVFRSDALVSGIGEELDEDHRLLLRSSIPLLKSRNSGVVLAVATLHYYCGTHSLATSTLIGKSLVRIMRNQREIQYVVLTVISSMAMTRPDM 388          
BLAST of mRNA_M-pyrifera_M_contig65824.15989.1 vs. uniprot
Match: A0A2S2PF34_SCHGA (AP-3 complex subunit beta-2 (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2PF34_SCHGA)

HSP 1 Score: 266 bits (679), Expect = 1.760e-82
Identity = 158/359 (44.01%), Postives = 216/359 (60.17%), Query Frame = 1
Query:    1 EKIRSLLDNAAVGTSSSTAMAGKAEGMKYLLAMTAKGRDVSSFYADVVKNVVVKDSEVKKLVYMFLVRYADANKDCRELALMAINSFQRDQSDSNPLIRAGALRVMANIRVREIVPIQIMAVKKSAYDTSPYVRKVAAHACCKVFHLDPSTIGELEPVVTRLLADKNVTVLSSAVQAYVEIFPDRLDMIHEEYRKLVGCLPDMDEWGQVTTLNMLVRYARTQFTDPSKATAAVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGPDVHEDGLDKDHKLLLDASRPLLASRNTGVVLAVAMVHHYLAPPSRFEDSRVGRALVRVMRNHREVTWVVLQTIRELAARSPGMF 1077
            + ++ +LD+A  G         K E MK ++ M AKGRD S  +  VVKNVV K+ EVKKLVY++LVRYA+  +D   LAL++I++FQR   D N LIRA ALRV+++IRV  IVPI ++A+K SA D SPYVRK AAHA  K++ LDP    EL  V+ +LLADK+  V+ S V A+ E+ P+R+D+IH+ YRKL   L D+DEWGQV  +NML RY RTQF +P+K                                            AG D     LD+DH+LLL  ++PL  SRN  VV++VA ++H+LAP S  E + + +AL+R++R+HREV  VVL +I  ++     MF
Sbjct:   21 DDLKQMLDSAKDGP--------KLEAMKRIIGMIAKGRDASELFPAVVKNVVSKNIEVKKLVYVYLVRYAEQQQD---LALLSISTFQRALKDPNQLIRASALRVLSSIRVVMIVPIVMLAIKDSAADMSPYVRKTAAHAIPKLYSLDPDQKEELITVIEKLLADKSTLVVGSTVMAFEEVCPERIDLIHKIYRKLCNLLVDIDEWGQVIIVNMLTRYGRTQFVNPNKNDT--------------------NDCPNIQNSNLDSSDLSSCEEAGVDDKSTVLDQDHRLLLRNAKPLFQSRNAAVVMSVAQLYHHLAPKS--EVNVIAKALIRLLRSHREVQSVVLNSIASISIARKNMF 346          
BLAST of mRNA_M-pyrifera_M_contig65824.15989.1 vs. uniprot
Match: A0A484DV27_BRELC (AP3B1_C domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DV27_BRELC)

HSP 1 Score: 281 bits (720), Expect = 5.730e-82
Identity = 171/370 (46.22%), Postives = 220/370 (59.46%), Query Frame = 1
Query:    1 EKIRSLLDNAAVGTSSSTAMAGKAEGMKYLLAMTAKGRDVSSFYADVVKNVVVKDSEVKKLVYMFLVRYADANKDCRELALMAINSFQRDQSDSNPLIRAGALRVMANIRVREIVPIQIMAVKKSAYDTSPYVRKVAAHACCKVFHLDPSTIGELEPVVTRLLADKNVTVLSSAVQAYVEIFPDRLDMIHEEYRKLVGCLPDMDEWGQVTTLNMLVRYARTQFTDPSKATAAVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGPDVHE-----------DGLDKDHKLLLDASRPLLASRNTGVVLAVAMVHHYLAPPSRFEDSRVGRALVRVMRNHREVTWVVLQTIRELAARSPGMF 1077
            ++IR LLDN  +G +  +    K E MK LLA  +KG DVS F+ADVVKNV+V   EVKKLVYM+LV YADAN  CRELAL++INSFQ+D +D N LIRA ALRVM +IRVR+IV IQ++A++K A D+S YVRK A +A  KVF LDP     L  ++  LL D +  VL SAVQA  E+ PDRLD++H  +RKL   L D+DEWGQ   L++L+RY R QF  P      V E+                                    A P V             D L++DH+L+L +S PLL SRN+ VVLAVA +H+Y    S    + +G++LVR+MRN RE+ +VVL  I  +A   P MF
Sbjct:   24 DRIRKLLDNK-LGVAGHSE---KLEAMKALLASISKGEDVSPFFADVVKNVIVASVEVKKLVYMYLVHYADANAQCRELALLSINSFQKDLADPNQLIRALALRVMTSIRVRDIVQIQLIAIRKCAADSSAYVRKCATNAISKVFVLDPEQKDVLAEIIGELLNDPSTMVLGSAVQALNEVCPDRLDLLHRPFRKLCHLLADVDEWGQTVMLHVLLRYCRQQFQAPVYEKKEV-ESSKKSKKGFYADEGSGSEDESKPRRNKQAPFMLGKRDALPSVGSVFSNSFANSIGDELEEDHRLVLRSSIPLLKSRNSAVVLAVATLHYYCGTHSLATSTLIGKSLVRIMRNQREIQYVVLTVISSMATSRPDMF 388          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65824.15989.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812LS50_9DINO5.740e-9751.10AP-3 complex subunit beta n=1 Tax=Symbiodinium sp.... [more]
A0A5A8DGJ5_CAFRO1.240e-9348.07AP complex subunit beta n=2 Tax=Sar TaxID=2698737 ... [more]
A0A7S2DHK3_9STRA6.540e-8746.74Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A6A5AKY0_9STRA1.760e-8443.32Adaptin_N domain-containing protein (Fragment) n=2... [more]
A0A8K1FJB0_PYTOL2.910e-8443.96Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A225VXH3_9STRA6.770e-8444.65AP-3 complex subunit beta n=1 Tax=Phytophthora meg... [more]
A0A7S2SUN3_9STRA4.550e-8346.09AP-3 complex subunit beta n=1 Tax=Rhizochromulina ... [more]
A0A0P1ACX9_PLAHL7.130e-8346.61Ap-3 complex subunit n=1 Tax=Plasmopara halstedii ... [more]
A0A2S2PF34_SCHGA1.760e-8244.01AP-3 complex subunit beta-2 (Fragment) n=1 Tax=Sch... [more]
A0A484DV27_BRELC5.730e-8246.22AP3B1_C domain-containing protein n=1 Tax=Bremia l... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65824contigM-pyrifera_M_contig65824:3..1255 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score286.2
Seed ortholog evalue2.1e-74
Seed eggNOG ortholog4792.ETI37280
Preferred nameAP3B2
KEGG koko:K12397
KEGG Pathwayko04142,map04142
Hectar predicted targeting categoryother localisation
GOsGO:0000041,GO:0002376,GO:0002475,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005798,GO:0005802,GO:0005829,GO:0006605,GO:0006622,GO:0006623,GO:0006725,GO:0006726,GO:0006727,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006829,GO:0006886,GO:0006887,GO:0006892,GO:0006896,GO:0006897,GO:0006928,GO:0006950,GO:0006996,GO:0007017,GO:0007018,GO:0007033,GO:0007034,GO:0007040,GO:0007041,GO:0007220,GO:0007275,GO:0007568,GO:0007596,GO:0007599,GO:0008055,GO:0008088,GO:0008089,GO:0008104,GO:0008150,GO:0008152,GO:0008340,GO:0008565,GO:0009058,GO:0009611,GO:0009790,GO:0009792,GO:0009893,GO:0009987,GO:0010259,GO:0010468,GO:0010604,GO:0010628,GO:0010883,GO:0010970,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0018130,GO:0019222,GO:0019438,GO:0019538,GO:0019748,GO:0019882,GO:0019884,GO:0019899,GO:0019902,GO:0019903,GO:0022407,GO:0022409,GO:0030001,GO:0030117,GO:0030119,GO:0030123,GO:0030135,GO:0030137,GO:0030155,GO:0030705,GO:0030742,GO:0031323,GO:0031396,GO:0031399,GO:0031410,GO:0031982,GO:0031984,GO:0032268,GO:0032438,GO:0032501,GO:0032502,GO:0032879,GO:0032940,GO:0032991,GO:0033036,GO:0033059,GO:0033060,GO:0033365,GO:0034613,GO:0042060,GO:0042440,GO:0042441,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043324,GO:0043473,GO:0043474,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044550,GO:0045184,GO:0045580,GO:0045582,GO:0045595,GO:0045597,GO:0045619,GO:0045621,GO:0045785,GO:0046148,GO:0046152,GO:0046158,GO:0046483,GO:0046634,GO:0046635,GO:0046637,GO:0046638,GO:0046903,GO:0046907,GO:0047496,GO:0048003,GO:0048007,GO:0048066,GO:0048069,GO:0048193,GO:0048475,GO:0048489,GO:0048490,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048753,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050817,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0050878,GO:0050896,GO:0051094,GO:0051136,GO:0051138,GO:0051171,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051246,GO:0051249,GO:0051251,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0060255,GO:0060966,GO:0060967,GO:0060968,GO:0060969,GO:0061462,GO:0065007,GO:0065008,GO:0070727,GO:0070838,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072384,GO:0072511,GO:0072594,GO:0072665,GO:0072666,GO:0080090,GO:0080171,GO:0097479,GO:0097480,GO:0097708,GO:0098657,GO:0098791,GO:0098796,GO:0098930,GO:0099003,GO:0099111,GO:0099514,GO:0099517,GO:0099518,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1902105,GO:1902107,GO:1903037,GO:1903039,GO:1903320,GO:1903706,GO:1903708,GO:1905952,GO:2000026
EggNOG free text desc.Clathrin-adaptor complex-3 beta-1 subunit C-terminal
EggNOG OGs3QCM0@4776,COG5096@1,KOG1060@2759
COG Functional cat.U
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons2
Model size1077
Cds size1077
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816547.1039367-CDS-M-pyrifera_M_contig65824:2..9831622816547.1039367-CDS-M-pyrifera_M_contig65824:2..983Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65824 3..983 -
1692278039.5422182-CDS-M-pyrifera_M_contig65824:2..9831692278039.5422182-CDS-M-pyrifera_M_contig65824:2..983Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65824 3..983 -
1622816547.1150086-CDS-M-pyrifera_M_contig65824:1159..12551622816547.1150086-CDS-M-pyrifera_M_contig65824:1159..1255Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65824 1160..1255 -
1692278039.5561519-CDS-M-pyrifera_M_contig65824:1159..12551692278039.5561519-CDS-M-pyrifera_M_contig65824:1159..1255Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65824 1160..1255 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65824.15989.1prot_M-pyrifera_M_contig65824.15989.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig65824 3..1255 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig65824.15989.1

>prot_M-pyrifera_M_contig65824.15989.1 ID=prot_M-pyrifera_M_contig65824.15989.1|Name=mRNA_M-pyrifera_M_contig65824.15989.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=359bp
EKIRSLLDNAAVGTSSSTAMAGKAEGMKYLLAMTAKGRDVSSFYADVVKN
VVVKDSEVKKLVYMFLVRYADANKDCRELALMAINSFQRDQSDSNPLIRA
GALRVMANIRVREIVPIQIMAVKKSAYDTSPYVRKVAAHACCKVFHLDPS
TIGELEPVVTRLLADKNVTVLSSAVQAYVEIFPDRLDMIHEEYRKLVGCL
PDMDEWGQVTTLNMLVRYARTQFTDPSKATAAVAEAAAAALAKSAGKKKK
KRVSGFYSDEESEEVTDDEEEPAGPDVHEDGLDKDHKLLLDASRPLLASR
NTGVVLAVAMVHHYLAPPSRFEDSRVGRALVRVMRNHREVTWVVLQTIRE
LAARSPGMF
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mRNA from alignment at M-pyrifera_M_contig65824:3..1255-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig65824.15989.1 ID=mRNA_M-pyrifera_M_contig65824.15989.1|Name=mRNA_M-pyrifera_M_contig65824.15989.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1253bp|location=Sequence derived from alignment at M-pyrifera_M_contig65824:3..1255- (Macrocystis pyrifera P11B4 male)
GAGAAGATCCGTTCATTGCTTGACAATGCTGCTGTTGGCACATCGTCATC GACAGCAATGGCTGGGAAGGCAGAAGGCATGAAATACCTCCTTGCTGTAA GGATTTGTGACTGGAGATGAGAAGGTGGGGGTTTGGTTGGGGTGGTGGTG GAGGTTTGGGGGTGGGGTGAAGGGGGAGAAGGGGTGGAATCCGAGAGAAG GTTGTTTGGAATGGGTGGGTTGATAGGGATAGAGGATGGGTTATGGAGAG GATTGGTATGGATTGTGTGCAGATGACTGCCAAAGGCCGGGATGTGTCCT CATTTTATGCTGATGTGGTCAAGAACGTGGTGGTGAAGGATTCTGAAGTG AAAAAGTTGGTTTACATGTTCCTTGTGCGGTATGCTGATGCAAACAAGGA TTGTCGAGAATTGGCATTGATGGCAATCAACTCTTTTCAACGTGATCAGA GCGATTCGAACCCTCTGATTCGTGCAGGAGCGTTGCGTGTGATGGCAAAT ATTCGAGTCCGAGAAATTGTCCCAATCCAAATCATGGCTGTGAAAAAGAG TGCGTATGACACGTCACCATATGTACGCAAAGTTGCTGCACACGCATGTT GCAAAGTTTTTCACTTGGACCCCTCAACCATTGGAGAATTGGAACCAGTT GTCACTCGTCTCTTGGCTGACAAGAATGTGACTGTGCTCTCCTCCGCGGT GCAAGCATATGTGGAAATTTTCCCAGATCGTCTCGACATGATCCATGAAG AGTACCGCAAGCTGGTTGGCTGTCTTCCAGACATGGATGAGTGGGGACAA GTCACGACTCTGAACATGTTGGTACGCTATGCACGCACTCAATTCACAGA CCCGTCGAAAGCAACAGCTGCGGTGGCTGAAGCTGCGGCAGCTGCACTTG CAAAGAGTGCTGGGAAGAAGAAGAAGAAGCGTGTGTCTGGATTCTACAGC GATGAGGAAAGTGAGGAAGTGACGGATGACGAAGAAGAACCAGCCGGACC TGATGTCCACGAAGACGGGCTTGACAAGGATCACAAACTCTTGCTCGATG CCTCTCGTCCTCTCTTGGCTTCACGCAATACTGGTGTGGTTCTTGCTGTT GCAATGGTACACCACTACCTTGCACCACCAAGTCGGTTTGAAGATTCAAG GGTAGGACGTGCATTGGTGCGAGTGATGCGAAACCACCGCGAAGTGACAT GGGTAGTGTTGCAGACCATTCGTGAACTTGCTGCTCGTTCTCCAGGCATG TTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig65824:3..1255-

>mRNA_M-pyrifera_M_contig65824.15989.1 ID=mRNA_M-pyrifera_M_contig65824.15989.1|Name=mRNA_M-pyrifera_M_contig65824.15989.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2154bp|location=Sequence derived from alignment at M-pyrifera_M_contig65824:3..1255- (Macrocystis pyrifera P11B4 male)
GAGAAGATCCGTTCATTGCTTGACAATGCTGCTGTTGGCACATCGTCATC
GACAGCAATGGCTGGGAAGGCAGAAGGCATGAAATACCTCCTTGCTGAGA
AGATCCGTTCATTGCTTGACAATGCTGCTGTTGGCACATCGTCATCGACA
GCAATGGCTGGGAAGGCAGAAGGCATGAAATACCTCCTTGCTATGACTGC
CAAAGGCCGGGATGTGTCCTCATTTTATGCTGATGTGGTCAAGAACGTGG
TGGTGAAGGATTCTGAAGTGAAAAAGTTGGTTTACATGTTCCTTGTGCGG
TATGCTGATGCAAACAAGGATTGTCGAGAATTGGCATTGATGGCAATCAA
CTCTTTTCAACGTGATCAGAGCGATTCGAACCCTCTGATTCGTGCAGGAG
CGTTGCGTGTGATGGCAAATATTCGAGTCCGAGAAATTGTCCCAATCCAA
ATCATGGCTGTGAAAAAGAGTGCGTATGACACGTCACCATATGTACGCAA
AGTTGCTGCACACGCATGTTGCAAAGTTTTTCACTTGGACCCCTCAACCA
TTGGAGAATTGGAACCAGTTGTCACTCGTCTCTTGGCTGACAAGAATGTG
ACTGTGCTCTCCTCCGCGGTGCAAGCATATGTGGAAATTTTCCCAGATCG
TCTCGACATGATCCATGAAGAGTACCGCAAGCTGGTTGGCTGTCTTCCAG
ACATGGATGAGTGGGGACAAGTCACGACTCTGAACATGTTGGTACGCTAT
GCACGCACTCAATTCACAGACCCGTCGAAAGCAACAGCTGCGGTGGCTGA
AGCTGCGGCAGCTGCACTTGCAAAGAGTGCTGGGAAGAAGAAGAAGAAGC
GTGTGTCTGGATTCTACAGCGATGAGGAAAGTGAGGAAGTGACGGATGAC
GAAGAAGAACCAGCCGGACCTGATGTCCACGAAGACGGGCTTGACAAGGA
TCACAAACTCTTGCTCGATGCCTCTCGTCCTCTCTTGGCTTCACGCAATA
CTGGTGTGGTTCTTGCTGTTGCAATGGTACACCACTACCTTGCACCACCA
AGTCGGTTTGAAGATTCAAGGGTAGGACGTGCATTGGTGCGAGTGATGCG
AAACCACCGCGAAGTGACATGGGTAGTGTTGCAGACCATTCGTGAACTTG
CTGCTCGTTCTCCAGGCATGTTCATGACTGCCAAAGGCCGGGATGTGTCC
TCATTTTATGCTGATGTGGTCAAGAACGTGGTGGTGAAGGATTCTGAAGT
GAAAAAGTTGGTTTACATGTTCCTTGTGCGGTATGCTGATGCAAACAAGG
ATTGTCGAGAATTGGCATTGATGGCAATCAACTCTTTTCAACGTGATCAG
AGCGATTCGAACCCTCTGATTCGTGCAGGAGCGTTGCGTGTGATGGCAAA
TATTCGAGTCCGAGAAATTGTCCCAATCCAAATCATGGCTGTGAAAAAGA
GTGCGTATGACACGTCACCATATGTACGCAAAGTTGCTGCACACGCATGT
TGCAAAGTTTTTCACTTGGACCCCTCAACCATTGGAGAATTGGAACCAGT
TGTCACTCGTCTCTTGGCTGACAAGAATGTGACTGTGCTCTCCTCCGCGG
TGCAAGCATATGTGGAAATTTTCCCAGATCGTCTCGACATGATCCATGAA
GAGTACCGCAAGCTGGTTGGCTGTCTTCCAGACATGGATGAGTGGGGACA
AGTCACGACTCTGAACATGTTGGTACGCTATGCACGCACTCAATTCACAG
ACCCGTCGAAAGCAACAGCTGCGGTGGCTGAAGCTGCGGCAGCTGCACTT
GCAAAGAGTGCTGGGAAGAAGAAGAAGAAGCGTGTGTCTGGATTCTACAG
CGATGAGGAAAGTGAGGAAGTGACGGATGACGAAGAAGAACCAGCCGGAC
CTGATGTCCACGAAGACGGGCTTGACAAGGATCACAAACTCTTGCTCGAT
GCCTCTCGTCCTCTCTTGGCTTCACGCAATACTGGTGTGGTTCTTGCTGT
TGCAATGGTACACCACTACCTTGCACCACCAAGTCGGTTTGAAGATTCAA
GGGTAGGACGTGCATTGGTGCGAGTGATGCGAAACCACCGCGAAGTGACA
TGGGTAGTGTTGCAGACCATTCGTGAACTTGCTGCTCGTTCTCCAGGCAT
GTTC
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