mRNA_M-pyrifera_M_contig65823.15988.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig65823.15988.1
Unique NamemRNA_M-pyrifera_M_contig65823.15988.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig65823.15988.1 vs. uniprot
Match: A0A5J5PZ05_GOSBA (Uncharacterized protein n=1 Tax=Gossypium barbadense TaxID=3634 RepID=A0A5J5PZ05_GOSBA)

HSP 1 Score: 262 bits (670), Expect = 1.920e-83
Identity = 135/253 (53.36%), Postives = 185/253 (73.12%), Query Frame = 1
Query:    1 SFPSMPRFRDVPGGEERRALLFQKLRACRTLVFDFFDVDGNTAAKDAKRECLLELVEYVSSGEGQQLAFLGEGLAESVAMVSANIFRDLP-PPLDDPSQLMDNAEDDEPVLDPAWPHLQVVYEYLLRLVTAPCVKAKASKKVVNKAFCIKLVELFDSEDPRERDYLKTIMHRLYGKFMGHRALLRRSIGHVFFRFVFESGQHSGIAELLEILGAVINGFATPLKPEHIVFLERALLPLHRPRSMPRYHMPLAF 756
            SF ++P FRDVP  E++  LL +KL  C  +VFDF D   N   KD KR+ LLELV+YVSS  G+   F    + E V MVS N+FR L  PP ++      + ED+EP +DPAWPHLQVVYE+LLR V +P   AK +K+ ++ +F ++L++LFDSEDPRER+YLKT++HR+YGK M HR  +R++I ++F+RF+FE+ +H+GIAELLEILG++INGFA PLK EH +FL RAL+PLH+P+ +P YH  L++
Sbjct:   86 SFEALPSFRDVPNSEKQN-LLIRKLNLC-CIVFDFTDPTKNLKEKDLKRQTLLELVDYVSSANGK---FSEIVMQEIVKMVSVNLFRALTSPPRENKVLEAFDLEDEEPSMDPAWPHLQVVYEFLLRFVASPETDAKLAKRYIDHSFVLRLLDLFDSEDPREREYLKTVLHRIYGKLMVHRPFIRKAINNIFYRFIFETEKHNGIAELLEILGSIINGFALPLKEEHKLFLVRALIPLHKPKCIPMYHQQLSY 333          
BLAST of mRNA_M-pyrifera_M_contig65823.15988.1 vs. uniprot
Match: A0A3N7FK40_POPTR (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Populus trichocarpa TaxID=3694 RepID=A0A3N7FK40_POPTR)

HSP 1 Score: 263 bits (673), Expect = 3.000e-83
Identity = 133/252 (52.78%), Postives = 184/252 (73.02%), Query Frame = 1
Query:    4 FPSMPRFRDVPGGEERRALLFQKLRACRTLVFDFFDVDGNTAAKDAKRECLLELVEYVSSGEGQQLAFLGEGLAESVAMVSANIFRDLPP-PLDDPSQLMDNAEDDEPVLDPAWPHLQVVYEYLLRLVTAPCVKAKASKKVVNKAFCIKLVELFDSEDPRERDYLKTIMHRLYGKFMGHRALLRRSIGHVFFRFVFESGQHSGIAELLEILGAVINGFATPLKPEHIVFLERALLPLHRPRSMPRYHMPLAF 756
            + ++P FRDVP  E++  L  +KL  C  +VFDF D   N   KD KR+ LLELV+YV+S  G+   F    + E + MVS N+FR L P P ++      + E++EP++DPAWPHLQ+VYE+ LR V +P   AK +K+ V+ AF +KL++LFDSEDPRER+YLKTI+HR+YGKFM HR  +R++I ++FFRF+FE+ +H+GIAELLE+LG++INGFA PLK EH +FL RAL+PLH+PR +P YH  L++
Sbjct:   89 YEALPGFRDVPNSEKQN-LFIRKLNLC-CVVFDFTDPTKNLKEKDIKRQTLLELVDYVTSANGK---FTETVMQEVIKMVSVNLFRPLTPHPRENKLSEAFDLEEEEPMMDPAWPHLQIVYEFFLRFVASPETDAKLAKRYVDHAFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLVRALIPLHKPRCLPMYHQQLSY 335          
BLAST of mRNA_M-pyrifera_M_contig65823.15988.1 vs. uniprot
Match: A0A0D2RPZ0_GOSRA (Serine/threonine protein phosphatase 2A regulatory subunit n=2 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2RPZ0_GOSRA)

HSP 1 Score: 263 bits (672), Expect = 6.340e-83
Identity = 135/253 (53.36%), Postives = 186/253 (73.52%), Query Frame = 1
Query:    1 SFPSMPRFRDVPGGEERRALLFQKLRACRTLVFDFFDVDGNTAAKDAKRECLLELVEYVSSGEGQQLAFLGEGLAESVAMVSANIFRDLP-PPLDDPSQLMDNAEDDEPVLDPAWPHLQVVYEYLLRLVTAPCVKAKASKKVVNKAFCIKLVELFDSEDPRERDYLKTIMHRLYGKFMGHRALLRRSIGHVFFRFVFESGQHSGIAELLEILGAVINGFATPLKPEHIVFLERALLPLHRPRSMPRYHMPLAF 756
            SF ++P FRDVP  E++  LL +KL  C  +VFDF D   N   KD KR+ LLELV+YVSS  G+   F    + E V MVS N+FR L  PP ++      + E++EP +DPAWPHLQVVYE+LLR V +P   AK +K+ ++ +F ++L++LFDSEDPRER+YLKT++HR+YGKFM HR  +R++I ++F+RF+FE+ +H+GIAELLEILG++INGFA PLK EH +FL RAL+PLH+P+ +P YH  L++
Sbjct:   86 SFEALPSFRDVPNSEKQN-LLIRKLNLC-CIVFDFTDPTKNLKEKDLKRQTLLELVDYVSSANGK---FSEIVMQEIVKMVSVNLFRALTSPPRENKVLEAFDLEEEEPSMDPAWPHLQVVYEFLLRFVASPETDAKLAKRYIDHSFVLRLLDLFDSEDPREREYLKTVLHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGIAELLEILGSIINGFALPLKEEHKLFLVRALIPLHKPKCIPMYHQQLSY 333          
BLAST of mRNA_M-pyrifera_M_contig65823.15988.1 vs. uniprot
Match: A0A5C7HGJ1_9ROSI (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HGJ1_9ROSI)

HSP 1 Score: 265 bits (676), Expect = 2.400e-82
Identity = 131/253 (51.78%), Postives = 189/253 (74.70%), Query Frame = 1
Query:    1 SFPSMPRFRDVPGGEERRALLFQKLRACRTLVFDFFDVDGNTAAKDAKRECLLELVEYVSSGEGQQLAFLGEGLAESVAMVSANIFRDL-PPPLDDPSQLMDNAEDDEPVLDPAWPHLQVVYEYLLRLVTAPCVKAKASKKVVNKAFCIKLVELFDSEDPRERDYLKTIMHRLYGKFMGHRALLRRSIGHVFFRFVFESGQHSGIAELLEILGAVINGFATPLKPEHIVFLERALLPLHRPRSMPRYHMPLAF 756
            S+ ++P FRDVP  E++  LL +K+  C  ++FDF D   N   KD KR+ LLE+V+Y++S  G+   F    + E + MVS N+FR L P P ++      + E+++P++DPAWPHLQ+VYE+LLR V +P   AK +K+ V+ +F +KL++LFDSEDPRER+YLKTI+HR+YGKFM HR  +R++I ++FFRF+FE+ +H+GIAELLE+LG++INGFA PLK EH +FL RAL+PLH+P+S+P YH PL++
Sbjct:   87 SYEALPGFRDVPSSEKQN-LLIRKMNLC-CVMFDFTDPTKNLKEKDIKRQTLLEIVDYLTSANGK---FTETLMQEVIKMVSVNLFRPLIPQPRENKVLESFDLEEEDPLMDPAWPHLQIVYEFLLRFVASPETDAKLAKRYVDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEVLGSIINGFALPLKEEHKLFLVRALIPLHKPKSLPMYHQPLSY 334          
BLAST of mRNA_M-pyrifera_M_contig65823.15988.1 vs. uniprot
Match: A0A6J1BIN4_9ROSI (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Herrania umbratica TaxID=108875 RepID=A0A6J1BIN4_9ROSI)

HSP 1 Score: 263 bits (671), Expect = 2.670e-82
Identity = 135/253 (53.36%), Postives = 186/253 (73.52%), Query Frame = 1
Query:    1 SFPSMPRFRDVPGGEERRALLFQKLRACRTLVFDFFDVDGNTAAKDAKRECLLELVEYVSSGEGQQLAFLGEGLAESVAMVSANIFRDLP-PPLDDPSQLMDNAEDDEPVLDPAWPHLQVVYEYLLRLVTAPCVKAKASKKVVNKAFCIKLVELFDSEDPRERDYLKTIMHRLYGKFMGHRALLRRSIGHVFFRFVFESGQHSGIAELLEILGAVINGFATPLKPEHIVFLERALLPLHRPRSMPRYHMPLAF 756
            SF ++P FRDVP  E++  L  +KL  C  +VFDF D   N   KD KR+ LLELV+YVSS  G+   F    + E V MVS N+FR L  PP ++      + E++EP +DPAWPHLQVVYE+LLRLV +P   AK +K+ ++ +F ++L++LFDSEDPRER+YLKT++HR+YGKFM HR  +R++I ++F+RF+FE+ +H+GIAELLEILG++INGFA PLK EH +FL RAL+PLH+P+ +P YH  L++
Sbjct:   87 SFEALPSFRDVPNSEKQN-LFIRKLNLC-CIVFDFTDPTKNFKEKDIKRQTLLELVDYVSSASGK---FSEIVMQEIVKMVSVNLFRALTSPPRENKVLEAFDLEEEEPSMDPAWPHLQVVYEFLLRLVASPETDAKLAKRYIDHSFVLRLLDLFDSEDPREREYLKTVLHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGIAELLEILGSIINGFALPLKEEHKLFLVRALIPLHKPKCIPMYHQQLSY 334          
BLAST of mRNA_M-pyrifera_M_contig65823.15988.1 vs. uniprot
Match: A0A7S0GE31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GE31_9STRA)

HSP 1 Score: 259 bits (663), Expect = 2.790e-82
Identity = 133/248 (53.63%), Postives = 180/248 (72.58%), Query Frame = 1
Query:   13 MPRFRDVPGGEERRALLFQKLRACRTLVFDFFDVDGNTAAKDAKRECLLELVEYVSSGEGQQLAFLGEGLAESVAMVSANIFRDLPPPLDDPSQLMDNAEDDEPVLDPAWPHLQVVYEYLLRLVTAPCVKAKASKKVVNKAFCIKLVELFDSEDPRERDYLKTIMHRLYGKFMGHRALLRRSIGHVFFRFVFESGQHSGIAELLEILGAVINGFATPLKPEHIVFLERALLPLHRPRSMPRYHMPLAF 756
            +P  RD P    R AL  QKL+ C  ++F F D   +   KD KR+ LLELV+YV++  GQ++ F    +++ +  V AN+ R LPP  DD      + E+DEPVL+PAWPHLQV YE+ LR + +  V AKA+K+ V++ FC++LVELFDSEDPRERDYLKTI+HR+YGKFM HR+ +RR+I +VF+RFV+ES +H+GI ELLEILG++INGFA PLK EH+ FL RAL+PLH+P+ +  YH  L++
Sbjct:   39 LPALRDAPPNR-REALFVQKLQLCG-VIFSFDDPTSDKRGKDMKRQTLLELVDYVNTPAGQKI-FTESVMSDLMKCVEANVCRALPPATDD-----FDPEEDEPVLEPAWPHLQVAYEFFLRFIVSSEVNAKAAKRYVDQRFCLQLVELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRRAISNVFYRFVYESERHNGIGELLEILGSIINGFAIPLKKEHLQFLVRALIPLHKPKCVGLYHQQLSY 278          
BLAST of mRNA_M-pyrifera_M_contig65823.15988.1 vs. uniprot
Match: D8RI58_SELML (Serine/threonine protein phosphatase 2A regulatory subunit n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RI58_SELML)

HSP 1 Score: 263 bits (671), Expect = 3.500e-82
Identity = 133/253 (52.57%), Postives = 187/253 (73.91%), Query Frame = 1
Query:    1 SFPSMPRFRDVPGGEERRALLFQKLRACRTLVFDFFDVDGNTAAKDAKRECLLELVEYVSSGEGQQLAFLGEGLAESVAMVSANIFRDLPPPLDDPSQLMDNA-EDDEPVLDPAWPHLQVVYEYLLRLVTAPCVKAKASKKVVNKAFCIKLVELFDSEDPRERDYLKTIMHRLYGKFMGHRALLRRSIGHVFFRFVFESGQHSGIAELLEILGAVINGFATPLKPEHIVFLERALLPLHRPRSMPRYHMPLAF 756
            +F  +P FRDVP  E +++L  +KL  C   VFDF D   +T  K+ KR+ LLELV+YV+SG G+   F    L +   MVSAN+FR LPP   + S + ++  ED+EPV+DPAWPHLQ+VYE+LLRLV +    AK +K+ ++  F ++L++LFDSEDPRER+YLKTI+HR+YGKFM HR  +R++I ++F+RF+FE+ +H+GIAE+LEILG++INGFA PLK EH +FL RAL+PLH+P+ +  YH  L++
Sbjct:   31 NFEPLPLFRDVPSSE-KQSLFVKKLHLC-CCVFDFTDPSKHTREKEIKRQTLLELVDYVTSGSGK---FTENVLEDMTKMVSANLFRSLPPSSRENSAVSESFDEDEEPVMDPAWPHLQIVYEFLLRLVVSTETDAKVAKRYIDHFFVLRLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGIAEMLEILGSIINGFALPLKEEHKLFLVRALVPLHKPKCVAMYHQQLSY 278          
BLAST of mRNA_M-pyrifera_M_contig65823.15988.1 vs. uniprot
Match: A0A7J8VVX7_9ROSI (Serine/threonine protein phosphatase 2A regulatory subunit n=4 Tax=Gossypium TaxID=3633 RepID=A0A7J8VVX7_9ROSI)

HSP 1 Score: 260 bits (665), Expect = 4.150e-82
Identity = 135/253 (53.36%), Postives = 184/253 (72.73%), Query Frame = 1
Query:    1 SFPSMPRFRDVPGGEERRALLFQKLRACRTLVFDFFDVDGNTAAKDAKRECLLELVEYVSSGEGQQLAFLGEGLAESVAMVSANIFRDL-PPPLDDPSQLMDNAEDDEPVLDPAWPHLQVVYEYLLRLVTAPCVKAKASKKVVNKAFCIKLVELFDSEDPRERDYLKTIMHRLYGKFMGHRALLRRSIGHVFFRFVFESGQHSGIAELLEILGAVINGFATPLKPEHIVFLERALLPLHRPRSMPRYHMPLAF 756
            S+ +MP F+DVP  E R+ L  +KL  C  ++FDF D   N   K+ KR+ LLELVEYV+S  G+   F    L E V MVSAN+FR   P P ++      + E++EP +DPAWPHLQ+VYE+LLR + +P   AK +K+ V++ F +KL++LFDSEDPRER+YLKTI+HR+YGKFM HR  +R++I ++FFRF+FE+ +H+GIAELLEILG++INGFA PLK EH VFL RAL+PLH+P+ +  YH  L++
Sbjct:   82 SYEAMPAFKDVPASE-RQNLFVKKLNLC-CVIFDFTDPTKNLKEKEIKRQTLLELVEYVTSANGK---FSDVVLQEIVKMVSANLFRSFNPQPRENKVIEGVDLEEEEPSMDPAWPHLQIVYEFLLRFIASPETDAKLAKRYVDQPFILKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFFRFIFETEKHNGIAELLEILGSIINGFALPLKEEHKVFLVRALIPLHKPKCLAMYHQQLSY 329          
BLAST of mRNA_M-pyrifera_M_contig65823.15988.1 vs. uniprot
Match: A0A7S4JT48_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7S4JT48_9STRA)

HSP 1 Score: 264 bits (674), Expect = 4.310e-82
Identity = 135/248 (54.44%), Postives = 183/248 (73.79%), Query Frame = 1
Query:   13 MPRFRDVPGGEERRALLFQKLRACRTLVFDFFDVDGNTAAKDAKRECLLELVEYVSSGEGQQLAFLGEGLAESVAMVSANIFRDLPPPLDDPSQLMDNAEDDEPVLDPAWPHLQVVYEYLLRLVTAPCVKAKASKKVVNKAFCIKLVELFDSEDPRERDYLKTIMHRLYGKFMGHRALLRRSIGHVFFRFVFESGQHSGIAELLEILGAVINGFATPLKPEHIVFLERALLPLHRPRSMPRYHMPLAF 756
            +P  RD P  + R  L  +KL+ C  ++F F D   +   KD KR+ LLELV+YV++  GQ++ F    +A+ +AMVSAN+ R LPP  DD      + E+DEPVL+PAWPHLQV YE+ LR + +  V AKA+KK V++ FC++LVELFDSEDPRERDYLKTI+HR+YGKFM HR+ +RR+I +VF+RFV+E+ +H+GI ELLEILG++INGFA PLK EH+ FL RAL+PLH+P+ +  YH  L++
Sbjct:  101 LPALRDAPPAK-REELFIKKLQLCG-VIFSFDDPTSDKRGKDMKRQTLLELVDYVNTPAGQKI-FTESVMADLMAMVSANVCRALPPATDD-----FDPEEDEPVLEPAWPHLQVAYEFFLRFIVSSEVNAKAAKKYVDQRFCLQLVELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRRAISNVFYRFVYETERHNGIGELLEILGSIINGFAIPLKKEHLQFLVRALIPLHKPKCVGLYHQQLSY 340          
BLAST of mRNA_M-pyrifera_M_contig65823.15988.1 vs. uniprot
Match: A0A067LPA8_JATCU (Serine/threonine protein phosphatase 2A regulatory subunit n=3 Tax=Crotonoideae TaxID=235631 RepID=A0A067LPA8_JATCU)

HSP 1 Score: 264 bits (674), Expect = 4.420e-82
Identity = 135/253 (53.36%), Postives = 186/253 (73.52%), Query Frame = 1
Query:    1 SFPSMPRFRDVPGGEERRALLFQKLRACRTLVFDFFDVDGNTAAKDAKRECLLELVEYVSSGEGQQLAFLGEGLAESVAMVSANIFRDLP-PPLDDPSQLMDNAEDDEPVLDPAWPHLQVVYEYLLRLVTAPCVKAKASKKVVNKAFCIKLVELFDSEDPRERDYLKTIMHRLYGKFMGHRALLRRSIGHVFFRFVFESGQHSGIAELLEILGAVINGFATPLKPEHIVFLERALLPLHRPRSMPRYHMPLAF 756
            SF ++P FRDVP  E+   L  +KL  C  +VFDF D   N   KD KR+ L+ELV+YVSS  G+   F    + E V MVS N+FR+L  PP ++      + E+DEP +DPAWPHLQVVYE+LLR V++P   AK +K+ V+ +F ++L++LFDSEDPRER+YLKT++HR+YGKFM HR  +R++I ++F+RF+FE+ +H+GIAELLEILG++INGFA PLK EH +FL RAL+PLH+P+ +P YH  L++
Sbjct:   84 SFEALPSFRDVPNAEKPN-LFIRKLNLC-CIVFDFTDPTKNFKEKDIKRQTLVELVDYVSSANGK---FSENMMQEIVKMVSTNLFRNLSSPPRENKVLEAFDLEEDEPSMDPAWPHLQVVYEFLLRFVSSPETDAKLAKRYVDHSFVLRLLDLFDSEDPREREYLKTVLHRIYGKFMVHRPFIRKAINNIFYRFIFETEKHNGIAELLEILGSIINGFALPLKEEHKLFLVRALIPLHKPKCLPMYHQQLSY 331          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65823.15988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5J5PZ05_GOSBA1.920e-8353.36Uncharacterized protein n=1 Tax=Gossypium barbaden... [more]
A0A3N7FK40_POPTR3.000e-8352.78Serine/threonine protein phosphatase 2A regulatory... [more]
A0A0D2RPZ0_GOSRA6.340e-8353.36Serine/threonine protein phosphatase 2A regulatory... [more]
A0A5C7HGJ1_9ROSI2.400e-8251.78Serine/threonine protein phosphatase 2A regulatory... [more]
A0A6J1BIN4_9ROSI2.670e-8253.36Serine/threonine protein phosphatase 2A regulatory... [more]
A0A7S0GE31_9STRA2.790e-8253.63Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
D8RI58_SELML3.500e-8252.57Serine/threonine protein phosphatase 2A regulatory... [more]
A0A7J8VVX7_9ROSI4.150e-8253.36Serine/threonine protein phosphatase 2A regulatory... [more]
A0A7S4JT48_9STRA4.310e-8254.44Serine/threonine protein phosphatase 2A regulatory... [more]
A0A067LPA8_JATCU4.420e-8253.36Serine/threonine protein phosphatase 2A regulatory... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig65823contigM-pyrifera_M_contig65823:3..758 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score268.1
Seed ortholog evalue4.1e-69
Seed eggNOG ortholog3694.POPTR_0008s18020.1
KEGG koko:K11584
KEGG Pathwayko03015,ko04071,ko04113,ko04114,ko04151,ko04152,ko04261,ko04728,ko05165,map03015,map04071,map04113,map04114,map04151,map04152,map04261,map04728,map05165
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0070013
EggNOG free text desc.The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment
EggNOG OGs37HSY@33090,3G8QI@35493,4JTC3@91835,KOG2085@1,KOG2085@2759
COG Functional cat.T
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03036
Exons1
Model size756
Cds size744
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816547.0577264-CDS-M-pyrifera_M_contig65823:2..7461622816547.0577264-CDS-M-pyrifera_M_contig65823:2..746Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65823 3..746 -
1692278039.5196366-CDS-M-pyrifera_M_contig65823:2..7461692278039.5196366-CDS-M-pyrifera_M_contig65823:2..746Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig65823 3..746 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816547.0714128-UTR-M-pyrifera_M_contig65823:746..7581622816547.0714128-UTR-M-pyrifera_M_contig65823:746..758Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig65823 747..758 -
1692278039.5312817-UTR-M-pyrifera_M_contig65823:746..7581692278039.5312817-UTR-M-pyrifera_M_contig65823:746..758Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig65823 747..758 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig65823.15988.1prot_M-pyrifera_M_contig65823.15988.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig65823 3..746 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig65823.15988.1

>prot_M-pyrifera_M_contig65823.15988.1 ID=prot_M-pyrifera_M_contig65823.15988.1|Name=mRNA_M-pyrifera_M_contig65823.15988.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp
MPRFRDVPGGEERRALLFQKLRACRTLVFDFFDVDGNTAAKDAKRECLLE
LVEYVSSGEGQQLAFLGEGLAESVAMVSANIFRDLPPPLDDPSQLMDNAE
DDEPVLDPAWPHLQVVYEYLLRLVTAPCVKAKASKKVVNKAFCIKLVELF
DSEDPRERDYLKTIMHRLYGKFMGHRALLRRSIGHVFFRFVFESGQHSGI
AELLEILGAVINGFATPLKPEHIVFLERALLPLHRPRSMPRYHMPLAF
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mRNA from alignment at M-pyrifera_M_contig65823:3..758-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig65823.15988.1 ID=mRNA_M-pyrifera_M_contig65823.15988.1|Name=mRNA_M-pyrifera_M_contig65823.15988.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=756bp|location=Sequence derived from alignment at M-pyrifera_M_contig65823:3..758- (Macrocystis pyrifera P11B4 male)
TCTTTTCCAAGCATGCCTCGTTTTCGTGACGTGCCAGGTGGGGAGGAGCG CAGAGCGTTGCTGTTTCAGAAGTTGCGAGCGTGCCGAACTTTGGTTTTCG ATTTTTTCGACGTTGATGGGAATACTGCAGCAAAAGATGCCAAGCGAGAG TGTCTGTTGGAGTTGGTTGAGTATGTGAGCAGCGGAGAAGGACAGCAGCT GGCGTTTCTGGGCGAAGGGTTGGCAGAAAGTGTTGCAATGGTTTCTGCGA ACATTTTCCGTGACCTCCCCCCTCCTCTCGATGACCCTTCACAACTGATG GACAATGCAGAGGATGATGAACCTGTGTTAGACCCGGCGTGGCCACACTT GCAGGTTGTGTATGAGTATTTACTGCGACTAGTGACTGCACCTTGTGTCA AAGCCAAAGCGAGCAAGAAGGTGGTCAACAAGGCGTTTTGCATCAAACTT GTGGAGCTGTTCGACTCTGAAGATCCTCGTGAACGCGACTACCTCAAAAC CATTATGCACCGGCTCTATGGCAAGTTCATGGGCCACCGTGCTCTGCTGC GCAGGTCCATTGGACATGTCTTTTTCCGCTTCGTCTTTGAAAGTGGCCAA CACAGCGGCATTGCAGAACTACTGGAAATTCTTGGCGCTGTGATCAATGG CTTTGCAACCCCGCTCAAGCCAGAGCACATTGTATTCTTGGAACGCGCAC TCCTCCCACTTCATCGGCCCAGGTCCATGCCGCGCTATCATATGCCTCTT GCTTTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig65823:3..758-

>mRNA_M-pyrifera_M_contig65823.15988.1 ID=mRNA_M-pyrifera_M_contig65823.15988.1|Name=mRNA_M-pyrifera_M_contig65823.15988.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1488bp|location=Sequence derived from alignment at M-pyrifera_M_contig65823:3..758- (Macrocystis pyrifera P11B4 male)
ATGCCTCGTTTTCGTGACGTGCCAGGTGGGGAGGAGCGCAGAGCGTTGCT
GTTTCAGAAGTTGCGAGCGTGCCGAACTTTGGTTTTCGATTTTTTCGACG
TTGATGGGAATACTGCAGCAAAAGATGCCAAGCGAGAGTGTCTGTTGGAG
TTGGTTGAGTATGTGAGCAGCGGAGAAGGACAGCAGCTGGCGTTTCTGGG
CGAAGGGTTGGCAGAAAGTGTTGCAATGGTTTCTGCGAACATTTTCCGTG
ACCTCCCCCCTCCTCTCGATGACCCTTCACAACTGATGGACAATGCAGAG
GATGATGAACCTGTGTTAGACCCGGCGTGGCCACACTTGCAGGTTGTGTA
TGAGTATTTACTGCGACTAGTGACTGCACCTTGTGTCAAAGCCAAAGCGA
GCAAGAAGGTGGTCAACAAGGCGTTTTGCATCAAACTTGTGGAGCTGTTC
GACTCTGAAGATCCTCGTGAACGCGACTACCTCAAAACCATTATGCACCG
GCTCTATGGCAAGTTCATGGGCCACCGTGCTCTGCTGCGCAGGTCCATTG
GACATGTCTTTTTCCGCTTCGTCTTTGAAAGTGGCCAACACAGCGGCATT
GCAGAACTACTGGAAATTCTTGGCGCTGTGATCAATGGCTTTGCAACCCC
GCTCAAGCCAGAGCACATTGTATTCTTGGAACGCGCACTCCTCCCACTTC
ATCGGCCCAGGTCCATGCCGCGCTATCATATGCCTCTTGCTTTTATGCCT
CGTTTTCGTGACGTGCCAGGTGGGGAGGAGCGCAGAGCGTTGCTGTTTCA
GAAGTTGCGAGCGTGCCGAACTTTGGTTTTCGATTTTTTCGACGTTGATG
GGAATACTGCAGCAAAAGATGCCAAGCGAGAGTGTCTGTTGGAGTTGGTT
GAGTATGTGAGCAGCGGAGAAGGACAGCAGCTGGCGTTTCTGGGCGAAGG
GTTGGCAGAAAGTGTTGCAATGGTTTCTGCGAACATTTTCCGTGACCTCC
CCCCTCCTCTCGATGACCCTTCACAACTGATGGACAATGCAGAGGATGAT
GAACCTGTGTTAGACCCGGCGTGGCCACACTTGCAGGTTGTGTATGAGTA
TTTACTGCGACTAGTGACTGCACCTTGTGTCAAAGCCAAAGCGAGCAAGA
AGGTGGTCAACAAGGCGTTTTGCATCAAACTTGTGGAGCTGTTCGACTCT
GAAGATCCTCGTGAACGCGACTACCTCAAAACCATTATGCACCGGCTCTA
TGGCAAGTTCATGGGCCACCGTGCTCTGCTGCGCAGGTCCATTGGACATG
TCTTTTTCCGCTTCGTCTTTGAAAGTGGCCAACACAGCGGCATTGCAGAA
CTACTGGAAATTCTTGGCGCTGTGATCAATGGCTTTGCAACCCCGCTCAA
GCCAGAGCACATTGTATTCTTGGAACGCGCACTCCTCCCACTTCATCGGC
CCAGGTCCATGCCGCGCTATCATATGCCTCTTGCTTTT
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