mRNA_M-pyrifera_M_contig658.15980.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig658.15980.1
Unique NamemRNA_M-pyrifera_M_contig658.15980.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig658.15980.1 vs. uniprot
Match: D7G6A8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6A8_ECTSI)

HSP 1 Score: 524 bits (1350), Expect = 6.410e-185
Identity = 264/324 (81.48%), Postives = 292/324 (90.12%), Query Frame = 1
Query:    1 TSSLEEIFLDPGFFWSWERFEDRWTNYFGFSEDDLVPTNLDVIENYNNLVCADLKSSFMKNTQFIKIINSEYFAPILTVNQHSSNKVLEQISSVDTFASLSNWLMRPVPTVTAAVRRFKERYFEDNYVIVMEMNLVADSSYGSAMQAAQQQLFFKEASDASYRAKGNLTPEQQGIVVLVVTDDEEALRSRLSDLGQDSLGAAGVVAITGPRGSGTTRILTELQQAWLLGYGDVSIVSPASATGVLGHARMSLLPIVIVDSHTAHQSTSSQPCLADVGLIQQASCFSPGMLSRLSYDANVPCLGNPPATVASSDAARGRMRRLEL 972
            TSSLEEIFLDPGFFWSWERFEDRW NYFG++E+DL  T +DVI NYN+LVC +LK+ FM +TQFIKI N+EYFAP+LTVNQH+S  VLE+I SVDTFASLSNWLMRPVPTVTAAVRRF+ERY EDNYVIVMEM+++ADS+ GS M AAQQQLFFKEASDASYRAKGNLTP+QQGIVVLVVTDDEE L+SR++DLGQDSLGAAGVVAITGPRG GTTRILTELQQAWLLGYGDVSIVSPAS  GVLGHARMS+ PIVI+DSHTAHQSTSSQPCLAD+G +Q+ASCFS  MLSRLSYD NVPCLG+PP TV S +AAR R R L L
Sbjct:   71 TSSLEEIFLDPGFFWSWERFEDRWLNYFGYAEEDLGSTVVDVIANYNSLVCDNLKN-FMGDTQFIKITNTEYFAPLLTVNQHASRTVLEEIPSVDTFASLSNWLMRPVPTVTAAVRRFRERYLEDNYVIVMEMDVLADSTGGSGMSAAQQQLFFKEASDASYRAKGNLTPDQQGIVVLVVTDDEEGLQSRVADLGQDSLGAAGVVAITGPRGFGTTRILTELQQAWLLGYGDVSIVSPASPIGVLGHARMSVSPIVILDSHTAHQSTSSQPCLADIGRVQEASCFSSAMLSRLSYDPNVPCLGDPPTTVNSCNAARDRARNLRL 393          
BLAST of mRNA_M-pyrifera_M_contig658.15980.1 vs. uniprot
Match: A0A6H5JJN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJN7_9PHAE)

HSP 1 Score: 522 bits (1344), Expect = 3.400e-182
Identity = 265/326 (81.29%), Postives = 293/326 (89.88%), Query Frame = 1
Query:    1 TSSLEEIFLDPGFFWSWERFEDRWTNYFGFSEDDLVPTNLDVIENYNNLVCADLKSSFMKNTQFIKIINSEYFAPILTVNQHSSNKVLEQISSVDTFASLSNWLMRPVPTVTAAVRRFKERYFEDNYVIVMEMNLVADSSYGSAMQAAQQQLFFKEASDASYRAKGNLTPEQQGIVVLVVTDDEEALRSRLSDLGQDSLGAAGVVAITGPRGSGTTRILTELQQAWLLGYGDVSIVSPASATGVLGHARMSLLPIVIVDSHTAHQSTSSQPCLADVGLIQQASCFSPGMLSRLSYDANVPCLGNPPATVASSDAARGRMR--RLEL 972
            TSSLEEIFLDPGFFWSWERFEDRW NYFG++E+DL  T +DVI NYN+LVC +LK+ FM +TQFIKI N+EYFAP+LTVNQH+   VLE+I SVDTFASLSNWLMRPVPTVTAAVRRF+ERYFEDNYVIVMEM+++AD++ GS M AAQQQLFFKEASDASYRAKGNLTP+QQG+VVLVVTDDEE L+SR++DLGQDSLGAAGVVAITGPRG GTTRILTELQQAWLLGYGDVSIVSPAS  GVLGHARMS+ PIVIVDSHTAHQSTSSQPCLADVG +Q+A CFS  MLSRLSYD NVPCLG+PP TV SS+ AR R R  RLEL
Sbjct:  190 TSSLEEIFLDPGFFWSWERFEDRWLNYFGYAEEDLGSTVVDVIANYNSLVCDNLKN-FMGDTQFIKITNTEYFAPLLTVNQHAGRTVLEEIPSVDTFASLSNWLMRPVPTVTAAVRRFRERYFEDNYVIVMEMDVLADTTGGSGMSAAQQQLFFKEASDASYRAKGNLTPDQQGVVVLVVTDDEEGLQSRVADLGQDSLGAAGVVAITGPRGFGTTRILTELQQAWLLGYGDVSIVSPASPIGVLGHARMSVSPIVIVDSHTAHQSTSSQPCLADVGRVQEARCFSSAMLSRLSYDPNVPCLGDPPRTVKSSNEARDRARNRRLEL 514          
BLAST of mRNA_M-pyrifera_M_contig658.15980.1 vs. uniprot
Match: A0A835YLY2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY2_9STRA)

HSP 1 Score: 313 bits (801), Expect = 1.490e-100
Identity = 168/304 (55.26%), Postives = 210/304 (69.08%), Query Frame = 1
Query:    4 SSLEEIFLDPGFFWSWERFEDRWTNYF--GFSEDDLVPTNLDVIENYNNLVCADLKSSFMKNTQFIKIINSEYFAPILTVNQHSSNKVLEQISSVDTFASLSNWLMRPVPTVTAAVRRFKERYFEDNYVIVMEMNLVADSSYGSAMQAAQQQLFFKEASDASYRAKGNLTPEQQGIVVLVVTDDEEALRSRLSDLGQDSLGAAGVVAITGPRGSGTTRILTELQQAWLLGYGDVSIVSPASATGVLGHARMSLLPIVIV-DSHTAHQSTSSQPCLADVGLIQQASCFSPGMLSRLSYDANVPCL 906
            SSLEEIFLDPGF+WSW+RF  RWT  F    +E D+V  N  V      L C DL+   +++ QF+K+  + YFAP L VN   ++ +  Q+     FA LSNWL+RPVPTV  AV RF ERYFEDNYVI +EM+L         M AAQQ+ FF+EA+DA+YRA    T   +G+++LVVTDDEEALR+RL    QD+LGAAG++AITGPRG+GT RILTELQ+ WLLGY DV IVSPAS TGV+GHAR    PIV+  D   AH S ++QPC AD+  ++ ASCF P ML++LS D  VPC+
Sbjct:   81 SSLEEIFLDPGFWWSWDRFMGRWTGRFERAAAEIDIVVVN--VSAEVEALACGDLRRWRVRD-QFVKVAGAHYFAPALAVNARHADALFAQLPRDQLFAYLSNWLLRPVPTVMTAVHRFAERYFEDNYVIGLEMSLWQALGEWGTMTAAQQKRFFQEAADATYRA----TQALRGVMILVVTDDEEALRARLKGQPQDALGAAGIIAITGPRGTGTRRILTELQEVWLLGYADVCIVSPASPTGVVGHARTGRAPIVVAADGGAAHASAATQPCFADLAALRAASCFRPDMLAQLSIDPEVPCV 377          
BLAST of mRNA_M-pyrifera_M_contig658.15980.1 vs. uniprot
Match: A0A7S2UWL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWL4_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 4.410e-7
Identity = 39/125 (31.20%), Postives = 68/125 (54.40%), Query Frame = 1
Query:   16 EIFLDPGFFWSWERFEDRWTNYFGFSEDDL--VPTNLDVIENYNNLVCADLKSSFMKNTQFIKIINS-------EYFAPILTVNQHSSNKVLEQISSVDTFASLSNWLMRPVPTVTAAVRRFKER 363
            E+F  PGF W W   ++         E DL  +PT LD +  + + +C+DL++ +   ++ +++  +       +YFA ++  N   +  + E++     FA LSN+L+RP+P VT AV RF+ER
Sbjct:    1 ELFEPPGFAWEWAALQEALGE-----EGDLSKIPT-LDPVAQFQSTICSDLRT-WDSGSKVVRLSTNSADGGPHQYFAALIAANPVFTF-LQEELPYDQLFALLSNFLLRPLPVVTYAVSRFRER 117          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig658.15980.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G6A8_ECTSI6.410e-18581.48Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JJN7_9PHAE3.400e-18281.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YLY2_9STRA1.490e-10055.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UWL4_9STRA4.410e-731.20Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig658contigM-pyrifera_M_contig658:1527..6336 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size975
Cds size975
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig658.15980.1prot_M-pyrifera_M_contig658.15980.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig658 1527..6336 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816546.2315774-CDS-M-pyrifera_M_contig658:1526..17241622816546.2315774-CDS-M-pyrifera_M_contig658:1526..1724Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 1527..1724 +
1692278038.957865-CDS-M-pyrifera_M_contig658:1526..17241692278038.957865-CDS-M-pyrifera_M_contig658:1526..1724Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 1527..1724 +
1622816546.2474284-CDS-M-pyrifera_M_contig658:1933..21231622816546.2474284-CDS-M-pyrifera_M_contig658:1933..2123Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 1934..2123 +
1692278038.968656-CDS-M-pyrifera_M_contig658:1933..21231692278038.968656-CDS-M-pyrifera_M_contig658:1933..2123Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 1934..2123 +
1622816546.2651405-CDS-M-pyrifera_M_contig658:5029..51601622816546.2651405-CDS-M-pyrifera_M_contig658:5029..5160Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 5030..5160 +
1692278038.9795291-CDS-M-pyrifera_M_contig658:5029..51601692278038.9795291-CDS-M-pyrifera_M_contig658:5029..5160Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 5030..5160 +
1622816546.278644-CDS-M-pyrifera_M_contig658:5364..55591622816546.278644-CDS-M-pyrifera_M_contig658:5364..5559Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 5365..5559 +
1692278038.989864-CDS-M-pyrifera_M_contig658:5364..55591692278038.989864-CDS-M-pyrifera_M_contig658:5364..5559Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 5365..5559 +
1622816546.2915015-CDS-M-pyrifera_M_contig658:6075..63361622816546.2915015-CDS-M-pyrifera_M_contig658:6075..6336Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 6076..6336 +
1692278039.0017567-CDS-M-pyrifera_M_contig658:6075..63361692278039.0017567-CDS-M-pyrifera_M_contig658:6075..6336Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig658 6076..6336 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig658.15980.1

>prot_M-pyrifera_M_contig658.15980.1 ID=prot_M-pyrifera_M_contig658.15980.1|Name=mRNA_M-pyrifera_M_contig658.15980.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=325bp
TSSLEEIFLDPGFFWSWERFEDRWTNYFGFSEDDLVPTNLDVIENYNNLV
CADLKSSFMKNTQFIKIINSEYFAPILTVNQHSSNKVLEQISSVDTFASL
SNWLMRPVPTVTAAVRRFKERYFEDNYVIVMEMNLVADSSYGSAMQAAQQ
QLFFKEASDASYRAKGNLTPEQQGIVVLVVTDDEEALRSRLSDLGQDSLG
AAGVVAITGPRGSGTTRILTELQQAWLLGYGDVSIVSPASATGVLGHARM
SLLPIVIVDSHTAHQSTSSQPCLADVGLIQQASCFSPGMLSRLSYDANVP
CLGNPPATVASSDAARGRMRRLEL*
back to top

mRNA from alignment at M-pyrifera_M_contig658:1527..6336+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig658.15980.1 ID=mRNA_M-pyrifera_M_contig658.15980.1|Name=mRNA_M-pyrifera_M_contig658.15980.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4810bp|location=Sequence derived from alignment at M-pyrifera_M_contig658:1527..6336+ (Macrocystis pyrifera P11B4 male)
ACGAGTTCGTTGGAGGAAATTTTCTTGGATCCGGGATTCTTTTGGAGCTG GGAGCGATTCGAGGACCGATGGACGAACTATTTTGGTTTCTCGGAGGACG ATCTTGTGCCAACTAATTTGGATGTCATCGAAAACTACAACAACCTGGTC TGCGCCGATCTGAAGAGCTCGTTCATGAAAAATACGCAATTCATTAAGGT GCGTCGGTAGGCGTGACCACGTCGTGAGAAGAGTGCGTTTTTTTCTTCAC GCATTTCGCAAGGAATCTCATGCAAGCCGACTAGCGGGGCATAGCGATGT GCATCGATGGCGAACTTGAGACGATTGCAGGTGCAGGAGTTTTTTTGCTC TCATAACGTTTGCAATCAATCGGTGTGACCATGCAGCGATGTTTTCTCCT GTCGCAGATTATCAACTCGGAGTATTTTGCTCCCATCCTGACGGTGAATC AACACTCTAGCAACAAAGTGTTGGAACAAATTTCGTCGGTGGATACTTTC GCGAGTCTCAGCAACTGGCTTATGCGCCCGGTGCCCACAGTGACTGCCGC CGTGCGGCGCTTCAAGGAGCGCTATTTCGAAGACAATTACGTCATCGGTG AGCAAACGAACGCTTTTGTTGAGATGACCACAGCCTTCGTCTAACCGTTG CATCACTCTCCATTAATATGAGACAGTCGCAATTTCGACTCAGTCACGTG TCACGACTCAAACTCGGAGTTGAAGACTCCAATTTCTCAGTTTGTAAAAC TGAGTCTCTGTTTCGGTAATTGCAAATCTGTCTGTCTGTCCGTCCGTCTG TCCGCATGTCTTATATTTTCGAACACGTTCCAGTGATCGGCATATTAGGT CGTTACAGATGATATTCGTACGACGTATTCGACTCTTACGGACCTTATAT ACTGAAGGCATACCACACCACCAGGCATTATTTAGCCGTATAATACATCC ACCACACCGTGCCATCATACCATACCACAAACATACCATATCACATACCG TGATTTTTCCATGTAGCGTATCCACCAAACAAACCGTACCATGATACCAT ACCAACATACTGTGCCACACAACACACCATGCCACACCGTACCGTACCGT ACCACGTACTATATCATACCCCTACTGTACCTACACCACCGGAGGGGCTC AACCATACGAGGACACGAGAAGAGCGTGCCTGATATCAAGGATAATGCTG TTGAACCGAGGGGCTCAACCATGTACGAGCACAGCTCTGCAGCAGCATAT GCAGCAGAGGCAGCCTCAGCTCTGCAGCAGGAGCGCATATATATAGCACC GCCATACAATTCAAACCCCCAACCCAACCAAGTACAACCCGCTTTTCGGT GTATAGTATGAACTCGCAGCCATCACCCTGCAACAACCGCAGCAATGCCG GCGGCGTTGAGAGCGGTAGTCAGGCCGAACAAGGGAGCAGTCATGCGACG AGCGTGTCAGGTCTCTGGGACCGCAGAGTTCACCGGGTGGGTCGCCATCG TGTGAACGCTTACTATCCGCTAGTTGGCCTTGAGTTGGGTGGGGCGTTGG ATTTACGGCCTACGTGCCGGGTTGTGCAGTGCAGTGTGCTGGTGTTTGTT GTGCTGTGTGCGCTCGATATAGTCGGGGAAATATTGTGGTCAATCATTTC CAGTTCCTACGAGAGGCTGTCGGTTGAGTCACGAGTGCTGGATACCCCTC AACGCCGCCGACGTTGCTGCTGTTGCAGGGTGATGGCTGCGAGTTCATAC TGCACCGAGAAGCGGGTTGTACTTGGGTTGGAGGTTCGGATTGTATGGCG GTGTTATATATGCGCTGTTGCTGCAGAGCTGTGTGACTTCTCCTGCTGCA TGCTGGAGCAGAGCTGTGTGGCTGCTCCTGCTGCATGCTACAGCAGAGCT GTGCCGTGTGCTGTGCGTTTTGCTGGGCCGTCGCTCGCCTCGTTGATTGC CCTCGGGTGTTCGGTGGCCCTTGTGCGTTATTCGATTTTTTTTCAAATAT GCTATTCCTCGATAGGACCCAAAGGCATATTTTTCATGAAGTTATATTCA AATATAATCAAATTCAATACTTGATTATCATGAAAAAGGTTTCTCGTCAA GACGGGCCCTAAACAAAAACAAGAAAAGACCCACGACGAATATATCCCAT ATCCCCGCCCAGTACGACCACGACTAGTGTCGATTACTCTGTAACCGTGC GTACAAGCGCAATAAATGTCAAGAAACCCCACTGCAGACAACTGTGCCGC CGTAGATCTGTCACGTTCATTATTCCCACTCTTCCAGTAATAGGCTGTGA AAGAGTCTGGTACATCACTAATAGCAAGAACACGAAAAAGTTTAATTCGC TTTCATTTTGCGATCCTCTGTATGGTGCAGACATCTTCTGTCTATTCGTT CGTCTGTCGATTACTTTGTAGCTGCTTGTTGGGGACATTCTCATTCGCTT TTATTTTGCGATCCTCTGTGTGGTACAGACATGCATGCATGTTCTGTCTA CTCGTCTGTCGATCACTTTGTTGCCGTCGTATAATTCGTTTCCCCGATTC AGAAAATATATAAAAATATTTATGTAAATATTATTTCGTGCAAGCTGTAC CTAATGACCCACCACCGCCTGGACTCTACGTACATGGGGTTATGATAGCA TGCTTCGTAAAAGGAGTATTTATTTCCGTACGTATGGACGGGTAGGCTTC CGGCTTCCGTTTTCGCTCGCAACCGGAGCCGTGGGTTCTTAGAGGCGAGG GGAGACATTGTGCGATATACAAATGGGCAGACGTGGTTTCCCGTAAACAA TACCGCCGTATTGACCAGGCAAGCCACAACCTATTGGTGGCTGTTGGGGG ATGGGGCGTCCTGCTCCGGCCGTGCTATCGTACTGCTGTACTGGCATACT ACTGTGTCCCATAATATAGTAACCGTTCGGATTTACCAATGAAGTCCGCG AGCCTTTTTTTCTTGGTTTTCCATGGAAAAAAGGAGACGTGCAGTCTGAG CCAAACCCCGCCCGCTGGAGTGTCGTCTGTGCCGGTGCCGACTGGTCTCT CTCGACACTCCCACCAACTCCAATTGCGACGTCACAAAAAAAAACAAGCA AACATTTCATCGAGGGCAATAACAATAGTTGTCTGCGTGATGAAAACTGG TGCGTGTCAAGTCTGTATTTGGTCCGTATTGAAAATAATGGGTTTCTTTC ATCGATGGCGGTCCTCAGAAAGAGTGATGACCAGTCCCTGCTGCACTTGG TTGGGTTTATGATACGCTGGGGCCATTGAAATATTTTTTGCATGCACCAC GAACTGCTTCGGTATACATACAGCAGCCATGGGTCCAAAGGGCAAAACCG AAAACAGTAAATAGCACACTCTCTGGCCGAATGTTTTTGCTTTCATCGCG ACAGGGAACGCCTACGAATACTGCTATGCAACACTTGTGCGCATCGGTCA TGACACTGTTGTCACAAGATGTCGATAATCCTCGCTCGTCCTATTTTATG CAGTGATGGAGATGAATTTAGTTGCCGACTCGAGCTATGGGAGTGCCATG CAAGCGGCTCAACAGCAGCTGTTTTTTAAAGAAGCCAGCGATGCAAGCTA CCGCGCCAAGGGCAACTTAACTCCAGAGCAGCAGGTGCGAGTGGGATGCC CAGAGTTTAGCTCCGCTTGCCCGGATTGCGTTGCAAAGCGTCACTGGATA CCCTTTCCTCCAAGTGTGCAAGTACGGTCCCTGGTTTTTGACACGAGGAT GATAAACTATGGCAACTGCAAACAATGTTACTATTATTAATAATATCATC AATGGTTTATCTGCTCCACCCCATACGATGTACTGCAGGGCATAGTAGTT CTGGTCGTCACCGATGATGAGGAAGCGCTGCGTTCACGACTGTCAGACTT GGGGCAGGACAGTTTAGGGGCGGCGGGAGTGGTTGCTATCACAGGCCCAC GAGGGTCCGGCACAACGCGCATTTTGACTGAGCTGCAGCAAGCGTGGTTG CTTGGATACGGAGACGTCAGCATCGTCTCACCGGTGAGTACCAGCGAGAA AAACATTGAACGCTTTTATTGCCGTATTTTGCCAACTTGGTATTCATACG TACTCGTACAGCGGATGTGCACATTAGCATTTACCTCGGTACCCTGGTAT AGTTTTTGCTCATTCCAGTAGGCTTTGGGCTTCACCCTGGCCTCCTCGTC GCAACTAAGATCCCGGCGTCTCAGAGCACCCCCCTCTCCGTCCCCTCTCC TCTATCGTAAGGTAAGCGCCTTCAACGGCAGTATGGCGCGTCGGGGTCAG TCAACACTTCTATTGCTCGTCGAGTCACATCGAATTGTGCATACTCACGT CACTGAGAATACCCCATCGATCCCCGCTTTGTGCCCACAACAAAATGCGT GAGGGCTCGAACCAGTGACCTTTAACGATTAATTAAGAACGTGCAGTGAA CCAATGTTGAGAACCACCGTTGCGTTTGCTTGTCCGGCTGCCCTTCTCTA ATCTAATACTATTGGTTCCGGCTGCGCTCGACTCGCCGTCACTTTGCAGG CGTCAGCCACGGGCGTGCTGGGGCATGCGCGGATGAGCTTATTGCCGATC GTGATTGTGGATAGCCACACTGCCCACCAGTCGACGTCTTCTCAGCCCTG CCTTGCCGACGTCGGTTTGATTCAGCAGGCCAGTTGCTTTAGTCCAGGCA TGCTTTCACGGCTGAGCTACGACGCGAACGTACCGTGCCTCGGCAACCCG CCCGCGACGGTGGCGAGTTCTGATGCAGCGAGAGGGCGCATGCGACGTCT AGAACTGTAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig658:1527..6336+

>mRNA_M-pyrifera_M_contig658.15980.1 ID=mRNA_M-pyrifera_M_contig658.15980.1|Name=mRNA_M-pyrifera_M_contig658.15980.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1950bp|location=Sequence derived from alignment at M-pyrifera_M_contig658:1527..6336+ (Macrocystis pyrifera P11B4 male)
ACGAGTTCGTTGGAGGAAATTTTCTTGGATCCGGGATTCTTTTGGAGCTG
GGAGCGATTCGAGGACCGATGGACGAACTATTTTGGTTTCTCGGAGGACG
ATCTTGTGCCAACTAATTTGGATGTCATCGAAAACTACAACAACCTGGTC
TGCGCCGATCTGAAGAGCTCGTTCATGAAAAATACGCAATTCATTAAGAC
GAGTTCGTTGGAGGAAATTTTCTTGGATCCGGGATTCTTTTGGAGCTGGG
AGCGATTCGAGGACCGATGGACGAACTATTTTGGTTTCTCGGAGGACGAT
CTTGTGCCAACTAATTTGGATGTCATCGAAAACTACAACAACCTGGTCTG
CGCCGATCTGAAGAGCTCGTTCATGAAAAATACGCAATTCATTAAGATTA
TCAACTCGGAGTATTTTGCTCCCATCCTGACGGTGAATCAACACTCTAGC
AACAAAGTGTTGGAACAAATTTCGTCGGTGGATACTTTCGCGAGTCTCAG
CAACTGGCTTATGCGCCCGGTGCCCACAGTGACTGCCGCCGTGCGGCGCT
TCAAGGAGCGCTATTTCGAAGACAATTACGTCATCGATTATCAACTCGGA
GTATTTTGCTCCCATCCTGACGGTGAATCAACACTCTAGCAACAAAGTGT
TGGAACAAATTTCGTCGGTGGATACTTTCGCGAGTCTCAGCAACTGGCTT
ATGCGCCCGGTGCCCACAGTGACTGCCGCCGTGCGGCGCTTCAAGGAGCG
CTATTTCGAAGACAATTACGTCATCGTGATGGAGATGAATTTAGTTGCCG
ACTCGAGCTATGGGAGTGCCATGCAAGCGGCTCAACAGCAGCTGTTTTTT
AAAGAAGCCAGCGATGCAAGCTACCGCGCCAAGGGCAACTTAACTCCAGA
GCAGCAGTGATGGAGATGAATTTAGTTGCCGACTCGAGCTATGGGAGTGC
CATGCAAGCGGCTCAACAGCAGCTGTTTTTTAAAGAAGCCAGCGATGCAA
GCTACCGCGCCAAGGGCAACTTAACTCCAGAGCAGCAGGGCATAGTAGTT
CTGGTCGTCACCGATGATGAGGAAGCGCTGCGTTCACGACTGTCAGACTT
GGGGCAGGACAGTTTAGGGGCGGCGGGAGTGGTTGCTATCACAGGCCCAC
GAGGGTCCGGCACAACGCGCATTTTGACTGAGCTGCAGCAAGCGTGGTTG
CTTGGATACGGAGACGTCAGCATCGTCTCACCGGGCATAGTAGTTCTGGT
CGTCACCGATGATGAGGAAGCGCTGCGTTCACGACTGTCAGACTTGGGGC
AGGACAGTTTAGGGGCGGCGGGAGTGGTTGCTATCACAGGCCCACGAGGG
TCCGGCACAACGCGCATTTTGACTGAGCTGCAGCAAGCGTGGTTGCTTGG
ATACGGAGACGTCAGCATCGTCTCACCGGCGTCAGCCACGGGCGTGCTGG
GGCATGCGCGGATGAGCTTATTGCCGATCGTGATTGTGGATAGCCACACT
GCCCACCAGTCGACGTCTTCTCAGCCCTGCCTTGCCGACGTCGGTTTGAT
TCAGCAGGCCAGTTGCTTTAGTCCAGGCATGCTTTCACGGCTGAGCTACG
ACGCGAACGTACCGTGCCTCGGCAACCCGCCCGCGACGGTGGCGAGTTCT
GATGCAGCGAGAGGGCGCATGCGACGTCTAGAACTGTAAGCGTCAGCCAC
GGGCGTGCTGGGGCATGCGCGGATGAGCTTATTGCCGATCGTGATTGTGG
ATAGCCACACTGCCCACCAGTCGACGTCTTCTCAGCCCTGCCTTGCCGAC
GTCGGTTTGATTCAGCAGGCCAGTTGCTTTAGTCCAGGCATGCTTTCACG
GCTGAGCTACGACGCGAACGTACCGTGCCTCGGCAACCCGCCCGCGACGG
TGGCGAGTTCTGATGCAGCGAGAGGGCGCATGCGACGTCTAGAACTGTAA
back to top