mRNA_M-pyrifera_M_contig65760.15973.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A0A836BMG7_9CHLO (RRM domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BMG7_9CHLO) HSP 1 Score: 146 bits (368), Expect = 6.950e-42 Identity = 77/131 (58.78%), Postives = 94/131 (71.76%), Query Frame = 1
Query: 25 AAREALSKFSGPSGIVLGGPTKESAGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARRR 417
A R+ S+ +GPSG G + A VLY+GH+PHGFYE +MLG+FSQFG V RVR+SRS +T ++RGY FVEF EVA + AE M GYFL K+ L VKLL PA+VHP +F GA+RKFK IPW V R R
Sbjct: 6 AKRKEESEDAGPSGREQDGNAQ--ARVLYLGHLPHGFYEKEMLGYFSQFGKVTRVRLSRSKRTGKARGYAFVEFMHPEVASVAAEAMDGYFLFKQRLSVKLLPPAKVHPLLFNGANRKFKVIPWRKVERGR 134
BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A0A5A8DFN2_CAFRO (RRM domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8DFN2_CAFRO) HSP 1 Score: 146 bits (368), Expect = 6.650e-40 Identity = 68/113 (60.18%), Postives = 85/113 (75.22%), Query Frame = 1
Query: 79 GPTKESAGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARRR 417
GPT +AGV+YVGH+PHGFYE+ + GFF+QFG V RVRV+RS KTAR++GY FVEF + EVARIVAETM+ Y+L K L K + A HP +F GAHR+FK + W AR+R
Sbjct: 52 GPTPTTAGVVYVGHLPHGFYEEAIRGFFAQFGRVTRVRVARSKKTARAKGYAFVEFSNSEVARIVAETMNRYYLGGKYLVAKFIAGADAHPLLFVGAHRRFKAVDWRQAARKR 164
BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: D8TQJ3_VOLCA (RRM domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TQJ3_VOLCA) HSP 1 Score: 140 bits (353), Expect = 1.220e-39 Identity = 64/107 (59.81%), Postives = 85/107 (79.44%), Query Frame = 1
Query: 97 AGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARRR 417
A V+YVGH+PHGF+E QMLG+FSQFG V R+R+SRS KT ++GY F+EF+ EVAR+ AE M GYFL K+ L+ KL+ P++VHP++F GA+R+FK IPW V R+R
Sbjct: 27 ARVVYVGHVPHGFFEKQMLGYFSQFGKVTRLRLSRSKKTGNAKGYAFLEFQYPEVARVAAEAMDGYFLFKQRLKCKLIPPSRVHPQLFQGANRRFKVIPWRRVERQR 133
BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A8J450_CHLRE (Predicted protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A8J450_CHLRE) HSP 1 Score: 139 bits (351), Expect = 2.190e-39 Identity = 66/107 (61.68%), Postives = 83/107 (77.57%), Query Frame = 1
Query: 97 AGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARRR 417
A V+YVGHIPHGF+E QMLG+FSQFG V RVR+SRS +T S+GY F+EF+ EVAR+ AE M GYF+ K+ L KL+ PA+VHP +F GA+RKFK IP +V R+R
Sbjct: 23 ARVIYVGHIPHGFFEKQMLGYFSQFGKVTRVRLSRSKRTGNSKGYAFIEFQHPEVARVAAEAMDGYFIFKQRLSCKLMPPARVHPMLFNGANRKFKVIPRRTVERKR 129
BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A0A7S1CLL1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CLL1_9STRA) HSP 1 Score: 140 bits (352), Expect = 6.320e-39 Identity = 64/116 (55.17%), Postives = 89/116 (76.72%), Query Frame = 1
Query: 76 GGPTKESAGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEF--EDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARRR 417
GG ++ GV+Y+GHIPHGFYEDQM GFFSQFG V+R+R+SRS +T RSR Y F++F E+ + A++VA+TMHGY L L +++ P ++HPR F GA+RKF+ +PW S+AR+R
Sbjct: 59 GGSDQDDGGVVYLGHIPHGFYEDQMRGFFSQFGRVSRLRLSRSKRTGRSRHYAFLQFGKEEGDCAQVVAQTMHGYILMGHSLVCRVVPPERLHPRTFRGANRKFRAVPWRSIARQR 174
BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A0A6I9S6U9_ELAGV (MKI67 FHA domain-interacting nucleolar phosphoprotein n=4 Tax=Arecaceae TaxID=4710 RepID=A0A6I9S6U9_ELAGV) HSP 1 Score: 139 bits (349), Expect = 1.250e-38 Identity = 59/111 (53.15%), Postives = 87/111 (78.38%), Query Frame = 1
Query: 82 PTKESAGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARR 414
P KE+A VLY+GHIPHGFYE+QM GFF QFG + R+R+SR+ KT +S+ YGF+EFE+ EVA++VA+ M+ Y L + LQ+ L+ P +VHP+++ G +R+FK + W ++AR+
Sbjct: 49 PVKETATVLYIGHIPHGFYEEQMQGFFQQFGKIKRLRISRNRKTGKSKHYGFLEFENPEVAKVVADEMNNYLLFEHNLQLSLIPPERVHPKLWKGVNRRFKPVDWKAIARK 159
BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: Q8SAB6_ELAOL (RNA binding protein n=2 Tax=Arecaceae TaxID=4710 RepID=Q8SAB6_ELAOL) HSP 1 Score: 138 bits (347), Expect = 2.510e-38 Identity = 59/111 (53.15%), Postives = 86/111 (77.48%), Query Frame = 1
Query: 82 PTKESAGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARR 414
P KE+A VLY+GHIPHGFYE+QM GFF QFG + R+R+SR+ KT +S+ YGF+EFE+ EVA++VA+ M+ Y L + LQ+ L+ P +VHP++ G +R+FK + W ++AR+
Sbjct: 49 PVKETATVLYIGHIPHGFYEEQMQGFFQQFGKIKRLRISRNRKTGKSKHYGFLEFENPEVAKVVADEMNNYLLFEHNLQLSLIPPERVHPKLVKGVNRRFKPVDWKAIARK 159
BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A0A1X6PG87_PORUM (RRM domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PG87_PORUM) HSP 1 Score: 139 bits (349), Expect = 4.690e-38 Identity = 61/106 (57.55%), Postives = 85/106 (80.19%), Query Frame = 1
Query: 100 GVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARRR 417
GV+Y+GH+PHGFYE+Q+ GFFSQFGTV RV+V+RS K+AR++GY FV+F + EVARI AETMHGY + ++L V L+ P + H R++ GA RK+ +IPW ++ R+R
Sbjct: 113 GVVYIGHLPHGFYEEQLRGFFSQFGTVQRVKVARSKKSARAKGYAFVQFANVEVARIAAETMHGYLMFGRLLDVHLVPPERQHARLWVGAERKWDRIPWRAIERQR 218
BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A0A383WD88_TETOB (RRM domain-containing protein n=2 Tax=Scenedesmaceae TaxID=3086 RepID=A0A383WD88_TETOB) HSP 1 Score: 136 bits (343), Expect = 5.160e-38 Identity = 58/101 (57.43%), Postives = 82/101 (81.19%), Query Frame = 1
Query: 103 VLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSV 405
V+Y+GH+PHGFYED++LGFFSQFG + RVR+SRS KTA+ + Y F+EF+ +VA+I AETM GYF+ K+ L ++L ++VHP++F GA+RKFKK+PW +
Sbjct: 36 VVYIGHLPHGFYEDELLGFFSQFGKLVRVRLSRSKKTAKPKHYAFLEFQHADVAQIAAETMDGYFMFKQKLSCRVLKQSEVHPQLFKGANRKFKKVPWKKI 136
BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Match: A0A7S3BEE2_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BEE2_9EUKA) HSP 1 Score: 141 bits (356), Expect = 8.640e-38 Identity = 66/111 (59.46%), Postives = 85/111 (76.58%), Query Frame = 1
Query: 82 PTKESAGVLYVGHIPHGFYEDQMLGFFSQFGTVNRVRVSRSPKTARSRGYGFVEFEDREVARIVAETMHGYFLEKKVLQVKLLDPAQVHPRMFAGAHRKFKKIPWVSVARR 414
PT E AGVLY+GHIPHGFYEDQM GFFSQFGTV+R+R++R+ KT RS+ Y ++EF REVA+IVA++M+GY + KVL KLL +VHP F AHR+FK I ++ R+
Sbjct: 88 PTPEDAGVLYLGHIPHGFYEDQMRGFFSQFGTVSRLRLARNKKTGRSKHYAYIEFRHREVAQIVAKSMNGYLMFSKVLVCKLLSKEEVHPETFKNAHRRFKIIDRATMVRK 198 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65760.15973.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig65760.15973.1 >prot_M-pyrifera_M_contig65760.15973.1 ID=prot_M-pyrifera_M_contig65760.15973.1|Name=mRNA_M-pyrifera_M_contig65760.15973.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp SARAAWLPAAREALSKFSGPSGIVLGGPTKESAGVLYVGHIPHGFYEDQMback to top mRNA from alignment at M-pyrifera_M_contig65760:835..1251+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig65760.15973.1 ID=mRNA_M-pyrifera_M_contig65760.15973.1|Name=mRNA_M-pyrifera_M_contig65760.15973.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=417bp|location=Sequence derived from alignment at M-pyrifera_M_contig65760:835..1251+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig65760:835..1251+ >mRNA_M-pyrifera_M_contig65760.15973.1 ID=mRNA_M-pyrifera_M_contig65760.15973.1|Name=mRNA_M-pyrifera_M_contig65760.15973.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig65760:835..1251+ (Macrocystis pyrifera P11B4 male)back to top |