mRNA_M-pyrifera_M_contig65751.15970.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig65751.15970.1 vs. uniprot
Match: A0A7S1CNR1_9STRA (Hypothetical protein n=2 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNR1_9STRA) HSP 1 Score: 136 bits (343), Expect = 1.590e-34 Identity = 76/183 (41.53%), Postives = 120/183 (65.57%), Query Frame = 1
Query: 31 EVLEGKIDASDWKVEVARVSVKLRQQ-VMRGRVRDREWRAHLDEASAGRKGMEDVMGGTCNALERLSAEASSVLERVVAKEKFLNTTFGPSADQFRAGKSRLEDAKARHDTLSTSVADATSRLASLTDALEEVQTQLDDRGASAEDASPLVRIKAALAKLRSEMRNMDLRIGVLGHTIMQAKV 576
E L +D W+ E+ RV+ L+ V G +EWRAHL++ + + + +V+ L ++S+E +LER+V+KEK++N+ F AD++R + RL+ A ++ S +V TS L+ + D+LEEV++ +DDRG S D SPLVRIKAAL K++++++ MDLRIGV+GHT+MQAK+
Sbjct: 228 EALVATVDPLAWRTEMERVAPLLKTAGVASG---GKEWRAHLEQTTHHERTINEVLPDAAGVLRKISSEVGDMLERLVSKEKYINSHFDHLADEYRGEQERLKAATEQYQENSQAVNALTSELSIVQDSLEEVKSHMDDRGNSMTDTSPLVRIKAALTKIKTDIKTMDLRIGVVGHTLMQAKM 407
BLAST of mRNA_M-pyrifera_M_contig65751.15970.1 vs. uniprot
Match: UPI001B7E65C3 (intraflagellar transport protein 57 homolog n=3 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7E65C3) HSP 1 Score: 127 bits (319), Expect = 3.240e-31 Identity = 68/182 (37.36%), Postives = 115/182 (63.19%), Query Frame = 1
Query: 31 EVLEGKIDASDWKVEVARVSVKLRQQVMRGRVRDREWRAHLDEASAGRKGMEDVMGGTCNALERLSAEASSVLERVVAKEKFLNTTFGPSADQFRAGKSRLEDAKARHDTLSTSVADATSRLASLTDALEEVQTQLDDRGASAEDASPLVRIKAALAKLRSEMRNMDLRIGVLGHTIMQAKV 576
E+LE DA++W +EV RV +L+ + R +++WR HLD+ ++G+E + T L RL E S LE+V ++EK++N ++R +S+L +AK R+ S V T LA +T+ LE+V+ +++++G+S D +P+V+IK +L KL+ E+ MD+RIGV+ HT++QAK+
Sbjct: 210 EILESTTDAAEWNLEVERVLPQLKVTI---RTDNKDWRIHLDQMHQHKEGIESSLKETKGYLNRLQEEISKTLEKVASREKYINNQLEHLIHEYRTAQSQLSEAKERYQHGSGGVTQRTRMLAEITEELEKVKQEMEEKGSSMTDGAPVVKIKQSLTKLKQEIIQMDIRIGVVEHTLLQAKL 388
BLAST of mRNA_M-pyrifera_M_contig65751.15970.1 vs. uniprot
Match: A0A6P7XX80_9AMPH (Intraflagellar transport protein 57 homolog n=4 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7XX80_9AMPH) HSP 1 Score: 127 bits (318), Expect = 4.450e-31 Identity = 67/182 (36.81%), Postives = 116/182 (63.74%), Query Frame = 1
Query: 31 EVLEGKIDASDWKVEVARVSVKLRQQVMRGRVRDREWRAHLDEASAGRKGMEDVMGGTCNALERLSAEASSVLERVVAKEKFLNTTFGPSADQFRAGKSRLEDAKARHDTLSTSVADATSRLASLTDALEEVQTQLDDRGASAEDASPLVRIKAALAKLRSEMRNMDLRIGVLGHTIMQAKV 576
E+LE DA++W +EV RV +L+ + R +++WR H+D+ ++G+E + T L++L E S LE+V ++EK++N ++RA ++L +A+ R+ S V D T LA +T+ LE+V+ +++++G+S D +PLV+IK AL KL+ E MD+RIGV+ HT++Q+K+
Sbjct: 210 EILESTTDAAEWNLEVERVLPQLKVTI---RTDNKDWRIHVDQMHQHKEGIESSLKETKGYLDKLQNEISKTLEKVGSREKYINNQLEHLVQEYRAAHAQLSEARERYQQASGGVTDRTRVLAEITEELEKVKQEMEEKGSSMTDGAPLVKIKQALTKLKQETVQMDIRIGVVEHTLLQSKL 388
BLAST of mRNA_M-pyrifera_M_contig65751.15970.1 vs. uniprot
Match: T1D1P4_CUPSA (Putative intraflagellar transport protein n=1 Tax=Cupiennius salei TaxID=6928 RepID=T1D1P4_CUPSA) HSP 1 Score: 127 bits (318), Expect = 5.010e-31 Identity = 67/187 (35.83%), Postives = 118/187 (63.10%), Query Frame = 1
Query: 31 EVLEGKIDASDWKVEVARVSVKLRQQVMRGRVRDREWRAHLDEASAGRKGMEDVMGGTCNALERLSAEASSVLERVVAKEKFLNTTFGPSADQFRAGKSRLEDAKARHDTLSTSVADATSRLASLTDALEEVQTQLDDRGASAEDASPLVRIKAALAKLRSEMRNMDLRIGVLGHTIMQAKVLPAGS 591
EV+E IDA +WK+EV RV +L+ V R R+WR+HL++ RK +E+ + T L++L ++ S +E++ ++EK+LN ++R + +L K ++ ++S V + + L+ +T+ LE+V+ ++D+RG++ D PLV I+ AL+KL+ E+ MD+RIGV HT++QAK+ G+
Sbjct: 218 EVMESNIDAMEWKLEVERVMHQLKVTV---RNDSRDWRSHLEQIHQHRKNIEETLSTTKQQLDKLHSDISRSMEKISSREKYLNNQLEQLILEYRTAQDQLAQVKEQYKSVSGGVTERSRTLSQITEELEQVKQEMDERGSNMTDGKPLVNIRKALSKLKVELSQMDVRIGVASHTLLQAKLKEKGN 401
BLAST of mRNA_M-pyrifera_M_contig65751.15970.1 vs. uniprot
Match: UPI00109FC5C2 (LOW QUALITY PROTEIN: intraflagellar transport protein 57 homolog n=1 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=UPI00109FC5C2) HSP 1 Score: 124 bits (311), Expect = 5.860e-31 Identity = 65/182 (35.71%), Postives = 114/182 (62.64%), Query Frame = 1
Query: 31 EVLEGKIDASDWKVEVARVSVKLRQQVMRGRVRDREWRAHLDEASAGRKGMEDVMGGTCNALERLSAEASSVLERVVAKEKFLNTTFGPSADQFRAGKSRLEDAKARHDTLSTSVADATSRLASLTDALEEVQTQLDDRGASAEDASPLVRIKAALAKLRSEMRNMDLRIGVLGHTIMQAKV 576
E+LE DA++W +EV RV +L+ + R +++WR H+D+ + G+E + T L +L E S LE+V ++EK++N ++R +S L +AK R+ +S V + T LA +++ LE+++ +++++G+S D +PLVRIK +L KL+ E+ MD+RIGV+ HT++QA +
Sbjct: 99 EILESSTDATEWNLEVERVLPQLKVTI---RTDNKDWRIHVDQMHQHKDGIESSLKDTKTYLNKLQDEISKTLEKVASREKYINNQVKDLIQEYRGAQSYLGEAKDRYQQVSGGVTERTRALAEISEDLEKIKQEMEEKGSSMSDGAPLVRIKQSLTKLKQEIVQMDIRIGVVEHTLLQANL 277
BLAST of mRNA_M-pyrifera_M_contig65751.15970.1 vs. uniprot
Match: A0A4D5S009_IXOSC (Putative huntingtin (Fragment) n=1 Tax=Ixodes scapularis TaxID=6945 RepID=A0A4D5S009_IXOSC) HSP 1 Score: 124 bits (310), Expect = 6.200e-31 Identity = 65/187 (34.76%), Postives = 119/187 (63.64%), Query Frame = 1
Query: 31 EVLEGKIDASDWKVEVARVSVKLRQQVMRGRVRDREWRAHLDEASAGRKGMEDVMGGTCNALERLSAEASSVLERVVAKEKFLNTTFGPSADQFRAGKSRLEDAKARHDTLSTSVADATSRLASLTDALEEVQTQLDDRGASAEDASPLVRIKAALAKLRSEMRNMDLRIGVLGHTIMQAKVLPAGS 591
E+++ ID ++WK+EV RV +L+ + ++WR HLD+ RK ME+ + T + L+RL+A +S L++V ++EK+LN +R+ + L AK ++ ++S + D + LA +T+ L++++ ++++RG+S D +PLV I+ AL +L++E+ MD+RIGV HT++QAK+ G+
Sbjct: 85 EIMKSSIDGAEWKLEVERVLPQLKVTIQPDA---KDWRNHLDQIQQYRKDMEEGLTVTKSQLDRLAANIASTLDKVNSREKYLNAQLETFLSDYRSAQEGLAQAKEQYRSVSGGITDRSLTLAQITEELDQIKQEMEERGSSMTDGTPLVNIRKALTRLKAEITQMDVRIGVAVHTLLQAKLKEKGN 268
BLAST of mRNA_M-pyrifera_M_contig65751.15970.1 vs. uniprot
Match: A0A2G8K0Z4_STIJA (Putative intraflagellar transport protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8K0Z4_STIJA) HSP 1 Score: 125 bits (314), Expect = 1.800e-30 Identity = 67/182 (36.81%), Postives = 113/182 (62.09%), Query Frame = 1
Query: 31 EVLEGKIDASDWKVEVARVSVKLRQQVMRGRVRDREWRAHLDEASAGRKGMEDVMGGTCNALERLSAEASSVLERVVAKEKFLNTTFGPSADQFRAGKSRLEDAKARHDTLSTSVADATSRLASLTDALEEVQTQLDDRGASAEDASPLVRIKAALAKLRSEMRNMDLRIGVLGHTIMQAKV 576
E++ K DA+ WK+EV RV+ L+ + R +++WR H+D+ R G++ + T L++L E S LE++ ++EK++N +FR + L + K ++ S V + T LA +++ LE V+ ++++RG+S D SPLV+IK AL KL++E+ MD+RIGVL H++MQAK+
Sbjct: 213 EIMLSKTDANQWKLEVERVTPSLKVHI---RTDNKDWRTHVDQMHQHRDGIKSALSETKGHLDKLHKEISRTLEKISSREKYINNQLEHHLQEFRGVQDSLAEIKEQYRQASGGVTERTRNLAEISEDLERVKQEMEERGSSMTDGSPLVKIKQALQKLKNEVTQMDVRIGVLEHSLMQAKL 391
BLAST of mRNA_M-pyrifera_M_contig65751.15970.1 vs. uniprot
Match: A0A087X5G4_POEFO (Intraflagellar transport protein 57 homolog n=11 Tax=Cyprinodontoidei TaxID=8087 RepID=A0A087X5G4_POEFO) HSP 1 Score: 125 bits (313), Expect = 2.510e-30 Identity = 64/182 (35.16%), Postives = 117/182 (64.29%), Query Frame = 1
Query: 31 EVLEGKIDASDWKVEVARVSVKLRQQVMRGRVRDREWRAHLDEASAGRKGMEDVMGGTCNALERLSAEASSVLERVVAKEKFLNTTFGPSADQFRAGKSRLEDAKARHDTLSTSVADATSRLASLTDALEEVQTQLDDRGASAEDASPLVRIKAALAKLRSEMRNMDLRIGVLGHTIMQAKV 576
++LE +DA++W++EV RV +L+ + R ++WR HLD+ R G++ + T + L++L + LE+V ++EK++N P ++R ++RL +AK R+ S V T LA +++ L++V+ +++D+G+S D +P+V+IK +L KL+ E+ MD+RIGV+ HT++QAK+
Sbjct: 214 DILESTVDAAEWRLEVERVLPQLKVTI---RTDHKDWRIHLDQMHQHRDGIKTSLKDTKSYLDKLQEDIGKTLEKVSSREKYINNQLEPLIQEYRNAQARLSEAKERYRQASVGVMARTRVLAEISEELDKVKQEMEDKGSSMSDGAPVVKIKQSLTKLKQEVVQMDVRIGVVEHTLLQAKL 392
BLAST of mRNA_M-pyrifera_M_contig65751.15970.1 vs. uniprot
Match: A0A2J7ZHZ9_9CHLO (Intraflagellar transport protein 57 (Fragment) n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZHZ9_9CHLO) HSP 1 Score: 123 bits (309), Expect = 2.890e-30 Identity = 66/178 (37.08%), Postives = 112/178 (62.92%), Query Frame = 1
Query: 34 VLEGKIDASDWKVEVARVSVKLRQQVMRGRVRDREWRAHLDEASAGRKGMEDVMGGTCNALERLSAEASSVLERVVAKEKFLNTTFGPSADQFRAGKSRLEDAKARHDTLSTSVADATSRLASLTDALEEVQTQLDDRGASAEDASPLVRIKAALAKLRSEMRNMDLRIGVLGHTIMQ 567
VL K+D + WK+E+ RV+ KLR + ++WR+HLDEA ++ + + +LERL A+ +S LE++ +EKFLN F Q+RA ++ L D + ++ + +VAD S L + + LEEV+ +D++G++ DA+P+ RIK A+ +L E+ +M++RIGV+ HT++Q
Sbjct: 148 VLVSKVDPTLWKIELERVAPKLRITIAAD---SKDWRSHLDEAHQHKEVINKAWPDSKQSLERLRADLNSTLEKLQTREKFLNEQFEGLMQQYRASRTTLTDVQETYNRKTEAVADRNSELHRIAEQLEEVKAMMDEKGSNIADATPVARIKTAIKQLNKELHDMEVRIGVVSHTLLQ 322
BLAST of mRNA_M-pyrifera_M_contig65751.15970.1 vs. uniprot
Match: A0A8C5LS99_9ANUR (Intraflagellar transport protein 57 homolog n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5LS99_9ANUR) HSP 1 Score: 124 bits (311), Expect = 4.670e-30 Identity = 63/182 (34.62%), Postives = 118/182 (64.84%), Query Frame = 1
Query: 31 EVLEGKIDASDWKVEVARVSVKLRQQVMRGRVRDREWRAHLDEASAGRKGMEDVMGGTCNALERLSAEASSVLERVVAKEKFLNTTFGPSADQFRAGKSRLEDAKARHDTLSTSVADATSRLASLTDALEEVQTQLDDRGASAEDASPLVRIKAALAKLRSEMRNMDLRIGVLGHTIMQAKV 576
E+LE DA++WK+EV RV +L+ + R +++WR H+D+ + G+E+ + T L++L E LE+V ++EK++N P ++R+ ++++ + K ++ +S V + T L+ +T+ LE+V+ +++++G+S D +PLV+IK AL KL+ E M++RIGVL HT++Q+K+
Sbjct: 210 EILESVTDAAEWKLEVERVLPQLKVII---RTDNKDWRIHVDQMHQHKDGIENSLKETQGYLDKLHNEIGKTLEKVSSREKYINNQLDPMVQEYRSAQAKMSEVKDQYQQVSGRVTEKTRILSEITEELEKVKQEIEEKGSSMTDGAPLVKIKQALTKLKQETVEMEIRIGVLEHTLLQSKL 388 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65751.15970.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig65751.15970.1 >prot_M-pyrifera_M_contig65751.15970.1 ID=prot_M-pyrifera_M_contig65751.15970.1|Name=mRNA_M-pyrifera_M_contig65751.15970.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=216bp GGGDGEEGGGEVLEGKIDASDWKVEVARVSVKLRQQVMRGRVRDREWRAHback to top mRNA from alignment at M-pyrifera_M_contig65751:29..676+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig65751.15970.1 ID=mRNA_M-pyrifera_M_contig65751.15970.1|Name=mRNA_M-pyrifera_M_contig65751.15970.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=648bp|location=Sequence derived from alignment at M-pyrifera_M_contig65751:29..676+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig65751:29..676+ >mRNA_M-pyrifera_M_contig65751.15970.1 ID=mRNA_M-pyrifera_M_contig65751.15970.1|Name=mRNA_M-pyrifera_M_contig65751.15970.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1296bp|location=Sequence derived from alignment at M-pyrifera_M_contig65751:29..676+ (Macrocystis pyrifera P11B4 male)back to top |