mRNA_M-pyrifera_M_contig6574.15966.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6574.15966.1 vs. uniprot
Match: D8LEJ6_ECTSI (p28, 28 kDa light chain of axonemal inner dynein arms n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ6_ECTSI) HSP 1 Score: 226 bits (575), Expect = 1.170e-69 Identity = 118/125 (94.40%), Postives = 120/125 (96.00%), Query Frame = 2
Query: 38 DELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMVEMETQIAGLEEDKKDLELHVSELRNKVEVIEKGESERRAVDDKKRKEDIDFLKYQGQHLDSFLKQIGGSK 412
DELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGM EME QIA L EDKK LELHVSELRNKVEVIEKGESERRAVDDKKRKE++DFLKYQGQHLDSFLKQIGGSK
Sbjct: 147 DELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAALGEDKKGLELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIGGSK 271
BLAST of mRNA_M-pyrifera_M_contig6574.15966.1 vs. uniprot
Match: A0A835YSJ6_9STRA (p28 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSJ6_9STRA) HSP 1 Score: 187 bits (475), Expect = 4.710e-55 Identity = 96/125 (76.80%), Postives = 112/125 (89.60%), Query Frame = 2
Query: 38 DELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMVEMETQIAGLEEDKKDLELHVSELRNKVEVIEKGESERRAVDDKKRKEDIDFLKYQGQHLDSFLKQIGGSK 412
DELIR VTLDGPERGLL LRVRDEIRMTIDAY+TLYDSSV FG+KKQLQAEQGM EME +IA LEE K+ LE ELRN+VE++EK E+E+R+V+DK+R+E+++FLKYQGQHLDSFLKQIGGSK
Sbjct: 113 DELIRQVTLDGPERGLLLLRVRDEIRMTIDAYRTLYDSSVVFGIKKQLQAEQGMDEMEAEIAQLEESKQALEYRAQELRNRVELMEKREAEQRSVEDKRRREEVEFLKYQGQHLDSFLKQIGGSK 237
BLAST of mRNA_M-pyrifera_M_contig6574.15966.1 vs. uniprot
Match: A0A7S2CCB2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCB2_9STRA) HSP 1 Score: 184 bits (467), Expect = 7.730e-54 Identity = 96/125 (76.80%), Postives = 110/125 (88.00%), Query Frame = 2
Query: 38 DELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMVEMETQIAGLEEDKKDLELHVSELRNKVEVIEKGESERRAVDDKKRKEDIDFLKYQGQHLDSFLKQIGGSK 412
DELIR VTLDGPERGLL LRVRDEI+MTIDAYK LY+SSVTFGV+KQLQAEQGM E+E++I GLE KK+LE V ELRNKVEV EK +ER+ ++DKKRKE+IDFLKYQGQHLDSFL+Q+GG K
Sbjct: 114 DELIRQVTLDGPERGLLTLRVRDEIKMTIDAYKILYESSVTFGVRKQLQAEQGMAELESEIEGLEAAKKELENQVLELRNKVEVSEKRGNERKTLEDKKRKEEIDFLKYQGQHLDSFLRQLGGGK 238
BLAST of mRNA_M-pyrifera_M_contig6574.15966.1 vs. uniprot
Match: F0Y5N0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5N0_AURAN) HSP 1 Score: 181 bits (458), Expect = 4.240e-53 Identity = 94/122 (77.05%), Postives = 108/122 (88.52%), Query Frame = 2
Query: 38 DELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMVEMETQIAGLEEDKKDLELHVSELRNKVEVIEKGESERRAVDDKKRKEDIDFLKYQGQHLDSFLKQIG 403
DELIR +TLDGPERGLL LRVRDEIRMTIDAYK LYDSSVTFG++KQLQAEQGM E+E +IA LE + KDLE V ELRN VEVIEK E+E +AV+DKKRK++IDFLKYQGQHLD+FL+Q+G
Sbjct: 66 DELIRQITLDGPERGLLLLRVRDEIRMTIDAYKVLYDSSVTFGIRKQLQAEQGMSELEGRIAELEAENKDLENQVLELRNGVEVIEKRENEHKAVEDKKRKDEIDFLKYQGQHLDAFLRQLG 187
BLAST of mRNA_M-pyrifera_M_contig6574.15966.1 vs. uniprot
Match: A0A7S2UXS2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS2_9STRA) HSP 1 Score: 180 bits (457), Expect = 3.710e-52 Identity = 96/125 (76.80%), Postives = 107/125 (85.60%), Query Frame = 2
Query: 38 DELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMVEMETQIAGLEEDKKDLELHVSELRNKVEVIEKGESERRAVDDKKRKEDIDFLKYQGQHLDSFLKQIGGSK 412
DELIRHVTLD PERGLL LRVRDEIRMTIDAYKTLYDSSVTFG+KKQLQAE GM +ME QIA LE KK+ E ELRNK+EVIEK E ERR +++KKRKE+IDFLKYQGQHLD+ +K +GGSK
Sbjct: 128 DELIRHVTLDSPERGLLLLRVRDEIRMTIDAYKTLYDSSVTFGIKKQLQAEMGMSDMEKQIAILELTKKERENKTLELRNKLEVIEKREVERRGLEEKKRKEEIDFLKYQGQHLDTSIKHVGGSK 252
BLAST of mRNA_M-pyrifera_M_contig6574.15966.1 vs. uniprot
Match: A0A7S1GAQ8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAQ8_9STRA) HSP 1 Score: 177 bits (449), Expect = 4.510e-51 Identity = 93/123 (75.61%), Postives = 107/123 (86.99%), Query Frame = 2
Query: 38 DELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMVEMETQIAGLEEDKKDLELHVSELRNKVEVIEKGESERRAVDDKKRKEDIDFLKYQGQHLDSFLKQIGG 406
DELIR VT++ PERGLL LRVRDEIRMTIDAYKTLY+SSVTFGV+KQLQAEQG+ EME++I L E KKDL+ V ELRNKVEVIEK +ERR +++KKRKE+IDFLKYQGQHLD FLK +GG
Sbjct: 118 DELIRQVTINSPERGLLLLRVRDEIRMTIDAYKTLYESSVTFGVRKQLQAEQGLAEMESKIEELSEAKKDLQNQVLELRNKVEVIEKRATERRQLEEKKRKEEIDFLKYQGQHLDQFLKTLGG 240
BLAST of mRNA_M-pyrifera_M_contig6574.15966.1 vs. uniprot
Match: A0A8J2S909_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S909_9STRA) HSP 1 Score: 174 bits (441), Expect = 5.470e-50 Identity = 89/122 (72.95%), Postives = 105/122 (86.07%), Query Frame = 2
Query: 38 DELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMVEMETQIAGLEEDKKDLELHVSELRNKVEVIEKGESERRAVDDKKRKEDIDFLKYQGQHLDSFLKQIG 403
DELIR +TLDGPERGLL LRVRDE+RMT+DAYK LYDSSVTFGV+KQLQAEQGM E++ ++A LE + KDLE V ELRN VEV+EK SE +A+ DKKRK++IDFLKYQGQHLD FL+Q+G
Sbjct: 109 DELIRQLTLDGPERGLLLLRVRDEVRMTVDAYKVLYDSSVTFGVRKQLQAEQGMAELQGRVAELEAENKDLENRVLELRNGVEVVEKRASEHKAMADKKRKDEIDFLKYQGQHLDQFLRQLG 230
BLAST of mRNA_M-pyrifera_M_contig6574.15966.1 vs. uniprot
Match: A0A425CXM4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425CXM4_9STRA) HSP 1 Score: 164 bits (416), Expect = 1.260e-47 Identity = 86/128 (67.19%), Postives = 106/128 (82.81%), Query Frame = 2
Query: 26 LWRTDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMVEMETQIAGLEEDKKDLELHVSELRNKVEVIEKGESERRAVDDKKRKEDIDFLKYQGQHLDSFLKQIGGS 409
++ DELIR VT++ PERGLL LR+RDEIRMT DAYKTLYDSS+TFGV+KQLQAEQGM +E +IA L E+K++ E V EL NK+EVIEK SERRA+ +K+ KE+I+FLKYQGQHLD+FLK GG+
Sbjct: 1 MYELDELIREVTINSPERGLLLLRIRDEIRMTTDAYKTLYDSSITFGVRKQLQAEQGMGSIEDKIALLAEEKREYENKVLELTNKLEVIEKRGSERRALQEKRYKEEIEFLKYQGQHLDAFLKSAGGA 128
BLAST of mRNA_M-pyrifera_M_contig6574.15966.1 vs. uniprot
Match: A0A024UH61_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024UH61_9STRA) HSP 1 Score: 163 bits (413), Expect = 9.020e-46 Identity = 86/124 (69.35%), Postives = 104/124 (83.87%), Query Frame = 2
Query: 38 DELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMVEMETQIAGLEEDKKDLELHVSELRNKVEVIEKGESERRAVDDKKRKEDIDFLKYQGQHLDSFLKQIGGS 409
DELIR VT++ PERGLL LR+RDEIRMT DAYKTLYDSS+TFGV+KQLQAEQGM +E +IA L E+K++ E V EL NK+EVIEK SERRA+ +K+ KE+I+FLKYQGQHLD+FLK GG+
Sbjct: 111 DELIREVTINSPERGLLLLRIRDEIRMTTDAYKTLYDSSITFGVRKQLQAEQGMGSIEDKIALLAEEKREYENKVLELTNKLEVIEKRGSERRALQEKRYKEEIEFLKYQGQHLDAFLKSAGGA 234
BLAST of mRNA_M-pyrifera_M_contig6574.15966.1 vs. uniprot
Match: A0A812WGS2_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WGS2_SYMMI) HSP 1 Score: 160 bits (406), Expect = 2.580e-45 Identity = 82/125 (65.60%), Postives = 101/125 (80.80%), Query Frame = 2
Query: 38 DELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMVEMETQIAGLEEDKKDLELHVSELRNKVEVIEKGESERRAVDDKKRKEDIDFLKYQGQHLDSFLKQIGGSK 412
DELIR V LD PERGLL +R RDE++MTIDAYKTLY SSVTFG+KKQL+AEQG+ +E Q L++ LEL V ELR+K+E+IEK E+ERR ++KKRKE++DFLKYQGQHLDSF KQ+ +K
Sbjct: 66 DELIRQVALDSPERGLLLMRTRDEVKMTIDAYKTLYSSSVTFGIKKQLRAEQGIPALEEQANELQKTNSQLELEVQELRSKLEIIEKREAERRTTEEKKRKEELDFLKYQGQHLDSFTKQMNVAK 190 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6574.15966.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6574.15966.1 >prot_M-pyrifera_M_contig6574.15966.1 ID=prot_M-pyrifera_M_contig6574.15966.1|Name=mRNA_M-pyrifera_M_contig6574.15966.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=100bp MTIDAYKTLYDSSVTFGVKKQLQAEQGMVEMETQIAGLEEDKKDLELHVSback to top mRNA from alignment at M-pyrifera_M_contig6574:6170..13787- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6574.15966.1 ID=mRNA_M-pyrifera_M_contig6574.15966.1|Name=mRNA_M-pyrifera_M_contig6574.15966.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7618bp|location=Sequence derived from alignment at M-pyrifera_M_contig6574:6170..13787- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6574:6170..13787- >mRNA_M-pyrifera_M_contig6574.15966.1 ID=mRNA_M-pyrifera_M_contig6574.15966.1|Name=mRNA_M-pyrifera_M_contig6574.15966.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig6574:6170..13787- (Macrocystis pyrifera P11B4 male)back to top |