mRNA_M-pyrifera_M_contig65660.15955.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig65660.15955.1 vs. uniprot
Match: D3RY40_FERPA (2-dehydropantoate 2-reductase n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) TaxID=589924 RepID=D3RY40_FERPA) HSP 1 Score: 55.1 bits (131), Expect = 4.750e-6 Identity = 40/144 (27.78%), Postives = 72/144 (50.00%), Query Frame = 1
Query: 7 LSLPDGIREVVVHKAVVNAVLNPMAALRGWTNGEFAQEMLQIPSVCHLAEETHPIFHLTHTTPPNILPHLAHLPETQAPILSAVYTVAQASAENVCSTLAAVRKGKKTEVESINGVLATCLQQAGYATLHHNSILQAFESIHKL 438
+ + + I+E + KAVVN+V+NP+ A+ NGE + A+E+ + A + + AV VA+ +AEN+ S L V KG+KTE++ INGV+ ++ G +++ + +A ++I K+
Sbjct: 162 VEVVEDIKEKIWEKAVVNSVINPITAIFRVKNGEILRNEFLWEIAKKTAKESEEV---------------AREVGYEINAVEAVKIVAEKTAENISSMLQDVMKGRKTEIDFINGVIVKEGEKRGLDVCYNSFLWRAVKAIEKV 290
BLAST of mRNA_M-pyrifera_M_contig65660.15955.1 vs. uniprot
Match: A0A356EGC0_9SPIO (ApbA_C domain-containing protein n=1 Tax=Spirochaetaceae bacterium TaxID=1898206 RepID=A0A356EGC0_9SPIO) HSP 1 Score: 52.8 bits (125), Expect = 1.010e-5 Identity = 38/126 (30.16%), Postives = 62/126 (49.21%), Query Frame = 1
Query: 46 KAVVNAVLNPMAALRGWTNGEFAQEMLQIPSVCHLAEETHPIFHLTHTTPPNILPHLAHLPETQAPILSAVYTVAQASAENVCSTLAAVRKGKKTEVESINGVLATCLQQAGYATLHHNSILQAFE 423
KA+VNAV+NP+AAL G NG +P+ A++ I + L AP+ V QA+A+N CS L ++ G+ TE++ +NG +A ++ G A + ++ QA +
Sbjct: 36 KAIVNAVINPLAALAGIRNG-------LVPAQAGFAQQAEAIIDEAIA-----VAAAEGLSLPAAPLCDKVRQTCQATADNECSLLTDLKAGRPTEIDWLNGAIARLARRHGLAAPVNEALWQAIK 149
BLAST of mRNA_M-pyrifera_M_contig65660.15955.1 vs. uniprot
Match: A0A7W5AUR7_9BACL (2-dehydropantoate 2-reductase n=1 Tax=Paenibacillus phyllosphaerae TaxID=274593 RepID=A0A7W5AUR7_9BACL) HSP 1 Score: 53.9 bits (128), Expect = 1.290e-5 Identity = 39/141 (27.66%), Postives = 72/141 (51.06%), Query Frame = 1
Query: 10 SLPDGIREVVVHKAVVNAVLNPMAALRGWTNGEFAQEMLQIPSVCHLAEETHPIFHLTHTTPPNILPHLAHLPETQAPILSAVYTVAQASAENVCSTLAAVRKGKKTEVESINGVLATCLQQAGYATLHHNSILQAFESIH 432
SL + +R + K ++NAV+NP+ A+ G +NGE + + L +E+ + LA LPE +L+ V +A+A N S L VR G+ TE++ ING ++ ++ G+A ++++ +++H
Sbjct: 189 SLSNEMRNRIYEKLLINAVINPLTAIFGVSNGELPAHPHRRKMMRALHQESERLLRQA---------GLAPLPEAWERLLA----VCEATAANESSMLRDVRAGRGTEIDWINGGISALAKRMGHAAPLNDAVTAMVKALH 316
BLAST of mRNA_M-pyrifera_M_contig65660.15955.1 vs. uniprot
Match: A0A3D9IVQ9_9BACL (2-dehydropantoate 2-reductase n=1 Tax=Cohnella lupini TaxID=1294267 RepID=A0A3D9IVQ9_9BACL) HSP 1 Score: 53.1 bits (126), Expect = 2.340e-5 Identity = 39/140 (27.86%), Postives = 67/140 (47.86%), Query Frame = 1
Query: 13 LPDGIREVVVHKAVVNAVLNPMAALRGWTNGEFAQEMLQIPSVCHLAEETHPIFHLTHTTPPNILPHLAHLPETQAPILSAVYTVAQASAENVCSTLAAVRKGKKTEVESINGVLATCLQQAGYATLHHNSILQAFESIH 432
L +++ ++ K +VNAV+NP A+ NGE Q ++ V L ET I L ++ + +A+ V+QA++ N S L V GK+TE+E ING + + G + +N++ ++IH
Sbjct: 178 LSKHLKDEILRKLLVNAVINPTTAILRIRNGEITQSKERLEFVRSLFAETFGIL------------RSEGLSADESGLWNALLNVSQATSLNESSMLQDVLAGKETEIEFINGAIGRMAARQGKESPWNNAVTALVKAIH 305
BLAST of mRNA_M-pyrifera_M_contig65660.15955.1 vs. uniprot
Match: A0A1G3MUL2_9SPIR (2-dehydropantoate 2-reductase n=1 Tax=Spirochaetes bacterium GWC1_61_12 TaxID=1802180 RepID=A0A1G3MUL2_9SPIR) HSP 1 Score: 52.8 bits (125), Expect = 3.310e-5 Identity = 38/126 (30.16%), Postives = 62/126 (49.21%), Query Frame = 1
Query: 46 KAVVNAVLNPMAALRGWTNGEFAQEMLQIPSVCHLAEETHPIFHLTHTTPPNILPHLAHLPETQAPILSAVYTVAQASAENVCSTLAAVRKGKKTEVESINGVLATCLQQAGYATLHHNSILQAFE 423
KA+VNAV+NP+AAL G NG +P+ A++ I + L AP+ V QA+A+N CS L ++ G+ TE++ +NG +A ++ G A + ++ QA +
Sbjct: 200 KAIVNAVINPLAALAGIRNG-------LVPAQAGFAQQAEAIIDEAIA-----VAAAEGLSLPAAPLCDKVRQTCQATADNECSLLTDLKAGRPTEIDWLNGAIARLARRHGLAAPVNEALWQAIK 313
BLAST of mRNA_M-pyrifera_M_contig65660.15955.1 vs. uniprot
Match: A0A3E0U4Z8_9GAMM (2-dehydropantoate 2-reductase n=2 Tax=Thalassotalea euphylliae TaxID=1655234 RepID=A0A3E0U4Z8_9GAMM) HSP 1 Score: 52.4 bits (124), Expect = 4.630e-5 Identity = 37/131 (28.24%), Postives = 61/131 (46.56%), Query Frame = 1
Query: 43 HKAVVNAVLNPMAALRGWTNGEFAQEMLQIPSVCHLAEETHPIFHLTHTTPPNILPHLAHLPETQAPILSAVYTVAQASAENVCSTLAAVRKGKKTEVESINGVLATCLQQAGYATLHHNSILQAFESIHK 435
K +N V+NP+ AL NGE Q +P + +A+E + T I+ VAQA+A NV STLA VR + TE+ +ING + +AG + ++++++ ++ K
Sbjct: 217 QKLAINCVINPLTALNNVCNGEITQAQY-LPQISAIAKEVSEVASSQDIT------------LEANTIVEQALAVAQATANNVSSTLADVRADRTTEINAINGYICQLAIEAGISVPSNSALVEQVNALLK 334
BLAST of mRNA_M-pyrifera_M_contig65660.15955.1 vs. uniprot
Match: A0A2H5V5B3_9ARCH (2-dehydropantoate 2-reductase n=1 Tax=archaeon HR02 TaxID=2035438 RepID=A0A2H5V5B3_9ARCH) HSP 1 Score: 52.0 bits (123), Expect = 5.980e-5 Identity = 40/124 (32.26%), Postives = 60/124 (48.39%), Query Frame = 1
Query: 10 SLPDGIREVVVHKAVVNAVLNPMAALRGWTNGEFAQEMLQIPSVCHLAEETHPIFHLTHTTPPNILPHLAHLPETQAPILSAVYTVAQASAENVCSTLAAVRKGKKTEVESINGVLATCLQQAG 381
S + + V+ K ++N+V+NP+ AL G NGE + + L EE +L A L Q + S VY +A+ EN S L + +G++TE+E ING LA L+ AG
Sbjct: 175 SAVENVYPEVLTKLIINSVINPLTALLGVRNGELLEVQELSWVIDRLVEEGVEACYLLG----------AKLSPGQ--VKSRVYEAIKATYENKSSMLQDIERGRRTEIEFINGALARILRAAG 286
BLAST of mRNA_M-pyrifera_M_contig65660.15955.1 vs. uniprot
Match: A0A2M7KSU0_9BACT (2-dehydropantoate 2-reductase n=1 Tax=Armatimonadetes bacterium CG_4_8_14_3_um_filter_66_20 TaxID=1973912 RepID=A0A2M7KSU0_9BACT) HSP 1 Score: 51.6 bits (122), Expect = 8.110e-5 Identity = 39/124 (31.45%), Postives = 61/124 (49.19%), Query Frame = 1
Query: 10 SLPDGIREVVVHKAVVNAVLNPMAALRGWTNGEFAQEMLQIPSVCHLAEETHPIFHLTHTTPPNILPHLAHLPETQAPILSAVYTVAQASAENVCSTLAAVRKGKKTEVESINGVLATCLQQAG 381
S+PD I E + KA+VNAV+NP+ A+ G +NGE +P++ + H + H Q +L AV A+A NV S + G++TE+++ING + +QAG
Sbjct: 178 SVPD-IDEALWRKAIVNAVINPLTAIYGVSNGE-------LPTLSDAMDTAHAAIREATA----VAATRGHAFVEQE-LLEAVVQTCHATATNVSSMRQDIEAGRQTEIDAINGAIVRAGEQAG 288 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65660.15955.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig65660.15955.1 >prot_M-pyrifera_M_contig65660.15955.1 ID=prot_M-pyrifera_M_contig65660.15955.1|Name=mRNA_M-pyrifera_M_contig65660.15955.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp RILSLPDGIREVVVHKAVVNAVLNPMAALRGWTNGEFAQEMLQIPSVCHLback to top mRNA from alignment at M-pyrifera_M_contig65660:644..1099+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig65660.15955.1 ID=mRNA_M-pyrifera_M_contig65660.15955.1|Name=mRNA_M-pyrifera_M_contig65660.15955.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=456bp|location=Sequence derived from alignment at M-pyrifera_M_contig65660:644..1099+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig65660:644..1099+ >mRNA_M-pyrifera_M_contig65660.15955.1 ID=mRNA_M-pyrifera_M_contig65660.15955.1|Name=mRNA_M-pyrifera_M_contig65660.15955.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=912bp|location=Sequence derived from alignment at M-pyrifera_M_contig65660:644..1099+ (Macrocystis pyrifera P11B4 male)back to top |