mRNA_M-pyrifera_M_contig65658.15953.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig65658.15953.1 vs. uniprot
Match: A0A2D9C3A5_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D9C3A5_9BACT) HSP 1 Score: 303 bits (777), Expect = 1.030e-101 Identity = 156/238 (65.55%), Postives = 189/238 (79.41%), Query Frame = 1
Query: 1 NGSQRSIRAFTLIELLVVNSIISLLIGILLPALGSARQTVQNVLCKNNLRQIGIGMQMYFDEQKDARYIDMHPFL-------PGKDEVNPVTGSTDFRAHRWNVMRVLEPYLGGQVQDAFVCPSARGASSVLDEQTRLGMDFGGRVQVLDYDNDGIEEYSEYWFNDS---PTNTVDPSAGISGQRIRVVRNPSEVVLGMDAVDWIPRHRA--RATIDVPGINNFGSSNMLRGDLRVQE 678
N + S AFTLIELLVV SIISLLIGILLP+LG A++T QNVLC+NNLRQIG+G+QMY D+Q+D ++D+ PFL G EVNPVTG+ DFRAHRWN MR+LEPYLGGQVQDAF+CPSARGA+SVLDEQTR M+ GGR+QVLDYD DG+EEYSEYWFNDS P N D G+SGQ+IR ++NP+E+ MDAVD+IPRHR ++ D G+++ G+SNMLRGDLRVQ+
Sbjct: 10 NRFRHSAHAFTLIELLVVISIISLLIGILLPSLGRAKETAQNVLCQNNLRQIGVGIQMYLDDQRDPAFLDLWPFLNTTERQNDGTLEVNPVTGNHDFRAHRWNAMRLLEPYLGGQVQDAFICPSARGAASVLDEQTRREMEEGGRIQVLDYDLDGVEEYSEYWFNDSYVDPENRTDH--GVSGQKIRWIKNPAELTYSMDAVDYIPRHRNFDKSDTDAFGVSSSGASNMLRGDLRVQQ 245
BLAST of mRNA_M-pyrifera_M_contig65658.15953.1 vs. uniprot
Match: A0A5M4D9D9_9CYAN (Type II secretion system protein n=1 Tax=Cyanobacteria bacterium CYA TaxID=2484221 RepID=A0A5M4D9D9_9CYAN) HSP 1 Score: 236 bits (603), Expect = 8.640e-75 Identity = 135/246 (54.88%), Postives = 169/246 (68.70%), Query Frame = 1
Query: 4 GSQRSIR-AFTLIELLVVNSIISLLIGILLPALGSARQTVQNVLCKNNLRQIGIGMQMYFDEQKDA--RYIDMHPFL-------PGKDE-VNPVTGSTDFRAHRWNVMRVLEPYLGGQVQDA-FVCPSARGASSVLDEQTRLGMDFGGRVQVLDYDNDGIEEYSEYWFND--------SPTN-TVDPSAGISGQRIRVVRNPSEVVLGMDAVDWIPRHRARATIDVPGINNFGSSNMLRGDLRVQE 678
G R +R AFTLIELLVV +II++LIGILLP+L AR+ ++++C NNL+ IG+ QMY D+Q D R +DM+PFL P K + VNPV+G DFRA RW M VL+ YL G ++ F CPSARGASSVLD QTR M+ G RVQVLDYD DG EE+SEYW ND +P + D S G+SGQ++R +++P E+VL +DAVDWIPRHR+ A V N GSS +LRGDLRVQE
Sbjct: 9 GQARCVRPAFTLIELLVVIAIIAMLIGILLPSLAKAREAAKDIICMNNLKHIGMATQMYLDDQPDGDERMMDMYPFLNPASSNPPLKGKRVNPVSGRYDFRAQRWVPMEVLQEYLSGNSENGVFECPSARGASSVLDRQTRYAMESGARVQVLDYDLDGTEEFSEYWANDYYFDPNGGAPGDPNYDWSVGVSGQKLRAIQHPDELVLFIDAVDWIPRHRSPAWERVDDQNTMGSSMLLRGDLRVQE 254
BLAST of mRNA_M-pyrifera_M_contig65658.15953.1 vs. uniprot
Match: A0A7C5WLH6_9BACT (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C5WLH6_9BACT) HSP 1 Score: 184 bits (467), Expect = 2.470e-54 Identity = 117/243 (48.15%), Postives = 154/243 (63.37%), Query Frame = 1
Query: 13 RSIRAFTLIELLVVNSIISLLIGILLPALGSARQTVQNVLCKNNLRQIGIGMQMYFDEQKD--ARYIDMHPFLP--GKDEVNPVTGSTD--FRAHRWNVMRVLEP--YLGGQVQDAFVCPSARGASSVLDEQTRLGMDFGGRVQ---VLDYDNDGIEEYSEYWFNDSP---------TNTVDPSAGISGQRIRVVRNPSEVVLGMDAVDWIPRHR--ARATIDVPGINNFGSSNMLRGDLRVQ 675
R+ RAFTLIELLVV SII+LLIGILLPALG ARQT +V+C++NL+QIG+ +Q+Y D+Q + A + D++PF G E + G T F ++WNVMR L+ Y+ G D + CP+A GASSVLD TR G Q V DYD DG+EEY+EY FNDS +N V P G+S + IR + +P EVV +DA+DWIPRHR ++ T ++ GS N+L GD RV+
Sbjct: 6 RASRAFTLIELLVVISIIALLIGILLPALGKARQTAFDVICQSNLKQIGMAIQLYLDDQPEGNAVFFDLYPFDDNFGTSEPLQIEGITGGPFFIYQWNVMRALDEGGYISG-ADDTYHCPAAVGASSVLDPVTRSDPTVGYEPQINFVADYDRDGVEEYTEYKFNDSMPADPRQNYGSNGV-PRYGVSTRLIRAIPHPEEVVWAIDAIDWIPRHRIPSKKTRYTTDLDTLGSENLLFGDNRVK 246
BLAST of mRNA_M-pyrifera_M_contig65658.15953.1 vs. uniprot
Match: A0A6M8VZQ0_9BACT (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A6M8VZQ0_9BACT) HSP 1 Score: 177 bits (449), Expect = 5.800e-52 Identity = 105/223 (47.09%), Postives = 139/223 (62.33%), Query Frame = 1
Query: 25 AFTLIELLVVNSIISLLIGILLPALGSARQTVQNVLCKNNLRQIGIGMQMYFDEQKDARYIDMHPFLPGKDEVNPVTGSTDFRAHRWNVMRVLEPYLGGQVQDAFVCPSARGASSVLDEQTRLGMDFGGRVQVLDYDNDGIEEYSEYWFNDSPTNTVDPSAGISGQRIRVVRNPSEVVLGMDAVDWIPRHR---ARATIDVPGINN---FGSSNMLRGDLRVQ 675
AFTLIELLVV +II+LLIGILLP+LG AR ++V+CK+NLRQ+G MQMY D Q+D +ID +P S + R + W +R L+ YL +AF CP ARG SSVL++Q+R + GGR DYD+DG EY+EYW NDSP ++G+SG+ IR V++ EVVL DA+D PRH A+ PG + F +N L GDLR++
Sbjct: 10 AFTLIELLVVIAIIALLIGILLPSLGRARDAARDVICKSNLRQVGTAMQMYLDGQRDPVFIDFYP------------RSRNARDY-WEGVRTLDDYLANAESEAFGCPGARGLSSVLEDQSRSYLRQGGRFYDFDYDDDGEVEYTEYWMNDSPYEQG-LNSGVSGRPIRQVKHWEEVVLATDALDEFPRHSGPPAQIDFSQPGEDQRTRFAKNNFLFGDLRIE 218
BLAST of mRNA_M-pyrifera_M_contig65658.15953.1 vs. uniprot
Match: UPI0019C5A6E2 (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=UPI0019C5A6E2) HSP 1 Score: 164 bits (416), Expect = 4.140e-47 Identity = 102/220 (46.36%), Postives = 129/220 (58.64%), Query Frame = 1
Query: 28 FTLIELLVVNSIISLLIGILLPALGSARQTVQNVLCKNNLRQIGIGMQMYFDEQKDARYIDMHPFLPGKDEVNPVTGSTDFRAHRWNVMRVL-EPYLGGQVQDAFVCPSARGASSVLDEQTRLGMDFGGRVQVLDY---DNDGIEEYSEYWFNDS-PTNTVDPSAGISGQRIRVVRNPSEVVLGMDAVDWIPRHRARATIDVPGINNFGSSNMLRGDLRV 672
FTLIELLVV +II+LLI ILLP+L SAR ++ CK+N+RQIG+ +QMY DEQK Y D++P +DF RW ++ +L E Y+GG AF+CPSA+GASS LD TR M+ GG+ QV+D +G + SEYWFNDS P + G+SG I +RNP VV DAVDWIPRH G + L GD RV
Sbjct: 17 FTLIELLVVIAIIALLISILLPSLASARNAALSIKCKSNIRQIGLSLQMYLDEQKTPAYPDLYP-------------RSDFAGDRWYMVHLLYEDYMGGS-DGAFICPSAKGASSALDPTTRAAMEDGGKFQVMDQWPATGEGRKYVSEYWFNDSRPGVSNGRQHGVSGVPINGIRNPDWVVWIADAVDWIPRHD-------------GKCHFLFGDQRV 209
BLAST of mRNA_M-pyrifera_M_contig65658.15953.1 vs. uniprot
Match: UPI001AC3870A (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=UPI001AC3870A) HSP 1 Score: 154 bits (388), Expect = 1.040e-42 Identity = 95/232 (40.95%), Postives = 133/232 (57.33%), Query Frame = 1
Query: 10 QRSIRAFTLIELLVVNSIISLLIGILLPALGSARQTVQNVLCKNNLRQIGIGMQMYFDEQKDARYIDMHPFLPGKDEVNPVTGSTDFRAHRWNVMRVLEPYLGGQVQDAFVCPSARGASSVLDEQTRLGMDFGGRVQVLDYDNDG----IEEYSEYWFNDS-PTN-----TVDPSAGISGQRIRVVRNPSEVVLGMDAVDWIPRHRARATIDVPGINNFGSSNMLRGDLRVQ 675
+R+ RAFTLIELLVV +II++LI ILLP+LG+AR+T V+CK+NLRQIG+ + MY D+QKD ++D+ G D N V V+ L+PYL F CP+A+G SSV + + G + L + N G + +Y+EYWFNDS P+ T G+SGQR+R++RNP VV DA+D PRH + G G +N+L GD ++
Sbjct: 10 RRASRAFTLIELLVVIAIIAMLISILLPSLGNARRTAWTVICKSNLRQIGLAISMYLDDQKDPVFMDVRNSPAGTDWFNHV-----------GVVETLQPYLSYAGSKPFDCPAAKGLSSVRYPANIVYLQNGRHINSLPFPNLGGTQPVTDYTEYWFNDSLPSEPGYNGTFRAPFGVSGQRMRLIRNPQWVVWATDALDEYPRHEGKGN---NGTTRAGMNNLLFGDQSIK 227
BLAST of mRNA_M-pyrifera_M_contig65658.15953.1 vs. uniprot
Match: UPI0019886C00 (Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=UPI0019886C00) HSP 1 Score: 145 bits (365), Expect = 3.100e-39 Identity = 93/211 (44.08%), Postives = 123/211 (58.29%), Query Frame = 1
Query: 22 RAFTLIELLVVNSIISLLIGILLPALGSARQTVQNVLCKNNLRQIGIGMQMYFDEQKD--ARYIDMHPFLPGKDEVNPVTGSTDFRAHRWNVMRVLEPYLG-----------GQVQD-AFVCPSARGASSVLDEQTRLGMDFGGRVQVLDYDNDGIEEY-SEYWFNDSPTNTVDP--SAGISGQRIRVVRNPSEVVLGMDAVDWIPRHRAR 603
RAFTLIELLVV SIISLLIG+LLPALG AR ++++C N+RQ+GIG+Q Y +QK+ AR++++ P + + R H WN + +LE LG G Q+ F+CPSAR +SVLD TR M+ V D D DG +Y +EYWFNDS S G+S Q ++ V++ E V DAVDWIPRH +
Sbjct: 14 RAFTLIELLVVISIISLLIGLLLPALGQARNAARDLVCSTNMRQVGIGIQYYITDQKEITARFLNIRP------------RNINVRDH-WNAVPLLEEILGSPPSVVNGVFVGVTQNPVFLCPSARADTSVLDSTTRAEMESAAIFNVRDVDMDGTLDYITEYWFNDSRPGRFQSGHSYGMSNQLVQGVKHMDEAVWVADAVDWIPRHNGK 211
BLAST of mRNA_M-pyrifera_M_contig65658.15953.1 vs. uniprot
Match: A0A7L9BPY7_9BACT (Type II secretion system protein n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A7L9BPY7_9BACT) HSP 1 Score: 142 bits (358), Expect = 4.120e-38 Identity = 99/240 (41.25%), Postives = 139/240 (57.92%), Query Frame = 1
Query: 7 SQRSIR----AFTLIELLVVNSIISLLIGILLPALGSARQTVQNVLCKNNLRQIGIGMQMYFDEQKDARYIDMHPFLPGKDEVNPVTGSTDFRAHRWNVMRVLEPYLGGQVQ-DAFVCPSARGASSVLD-EQTRLGMDFGGRVQVLDYDN----DGIEEYSEYWFNDSPTNTVDPSAGISGQRIRVVRNPSEVVLGMDAVDWIPRHRARA-TIDVPGINNFGS------SNMLRGDLRVQ 675
S+R++R FTLIELLVV SII++LI +LLP+LG AR+T V+C++NL+Q+G +QMY D+QKDA+++D+ P G + N + +L PYLG F CP+A+ +SV + R + F RV L D E ++EYWFNDSP N S G+SG++IR +RNP+ VV DA+D PRH R+ TI V + GS +N+L GDL V+
Sbjct: 5 SERAVRRARAGFTLIELLVVISIIAVLISLLLPSLGGARRTAWTVICQSNLKQLGTAIQMYMDDQKDAQFLDL---------TTPPEGYAGDLLWQVNAVFILRPYLGDSTSLKPFECPAAKDDTSVRSLDNIRYTVPFR-RVFTLPIPGVLLGDPPEVWTEYWFNDSPINRQFNS-GVSGRKIRTIRNPNWVVWATDALDEFPRHSIRSRTISVGTRGDRGSEFENLANNLLFGDLSVK 233
BLAST of mRNA_M-pyrifera_M_contig65658.15953.1 vs. uniprot
Match: X0YAI1_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0YAI1_9ZZZZ) HSP 1 Score: 84.0 bits (206), Expect = 6.070e-17 Identity = 55/118 (46.61%), Postives = 69/118 (58.47%), Query Frame = 1
Query: 22 RAFTLIELLVVNSIISLLIGILLPALGSARQTVQNVLCKNNLRQIGIGMQMYFDEQKD---ARYID-MHPFLPGKDEVNPVTGSTDFRAHRWNVMRVLEPYLGGQVQDAFVCPSARGA 363
RAFTLIELLVV +I++LL+ ILLPALG AR+ + V C +NLRQI + QMY D+ + YID + F GK E+ V G N L+PY G + F CPS RGA
Sbjct: 25 RAFTLIELLVVVAIVTLLVSILLPALGHAREHGKRVRCTSNLRQIAVAWQMYLDDGTNWVFPAYIDNIQWFYGGKVEIYAVPGGGILNPRPLNRYLSLDPY-GNRAAQVFHCPSDRGA 141
BLAST of mRNA_M-pyrifera_M_contig65658.15953.1 vs. uniprot
Match: A0A518BU96_9BACT (Uncharacterized protein n=1 Tax=Mucisphaera calidilacus TaxID=2527982 RepID=A0A518BU96_9BACT) HSP 1 Score: 83.2 bits (204), Expect = 1.790e-15 Identity = 71/219 (32.42%), Postives = 96/219 (43.84%), Query Frame = 1
Query: 22 RAFTLIELLVVNSIISLLIGILLPALGSARQTVQNVLCKNNLRQIGIGMQMYFDEQKDARYIDMHPFLPGKDEVNPVTGSTDFRAHRWNVMRVLEPYLGGQVQD---------AFVCPSA----------RGASSVLDE--------------QTRLGMDFGGRVQVLDYDNDGIEEYSEYWFNDSPTNTVDPSAGISGQRIRVVRNPSEVVLGMDAVD 579
RAFTLIELLVV SII+LLIGILLPALG+AR + +N C +NLRQ+GIGM Y + KD +PG+ + P TG H ++ + V D F CP S DE QTR +D V + DN Y+F P + V P ++ Q+I + PS+ + D ++
Sbjct: 6 RAFTLIELLVVISIIALLIGILLPALGAARASARNTQCLSNLRQVGIGMYAYLTDNKDQ-------IVPGRS-ITPGTGGDVLEVHYAAILSQTGYGVADDVLDNPDDLSGNTMFRCPEGLDEVKVPGDPAAPQSQTDEEGLKGWRAFFAYRGQTRARVDTWYGVNTMQMDN----AVGAYYFESFPMSDVTPQQPMT-QKITKIHEPSKTAMIYDGIE 211 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig65658.15953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig65658.15953.1 >prot_M-pyrifera_M_contig65658.15953.1 ID=prot_M-pyrifera_M_contig65658.15953.1|Name=mRNA_M-pyrifera_M_contig65658.15953.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=226bp NGSQRSIRAFTLIELLVVNSIISLLIGILLPALGSARQTVQNVLCKNNLRback to top mRNA from alignment at M-pyrifera_M_contig65658:581..1258+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig65658.15953.1 ID=mRNA_M-pyrifera_M_contig65658.15953.1|Name=mRNA_M-pyrifera_M_contig65658.15953.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=678bp|location=Sequence derived from alignment at M-pyrifera_M_contig65658:581..1258+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig65658:581..1258+ >mRNA_M-pyrifera_M_contig65658.15953.1 ID=mRNA_M-pyrifera_M_contig65658.15953.1|Name=mRNA_M-pyrifera_M_contig65658.15953.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1356bp|location=Sequence derived from alignment at M-pyrifera_M_contig65658:581..1258+ (Macrocystis pyrifera P11B4 male)back to top |