mRNA_M-pyrifera_M_contig6562.15949.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig6562.15949.1 vs. uniprot
Match: D7G4U4_ECTSI (Phosphodiesterase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4U4_ECTSI) HSP 1 Score: 486 bits (1250), Expect = 6.490e-165 Identity = 239/298 (80.20%), Postives = 262/298 (87.92%), Query Frame = 1
Query: 1 HCFRFAAMSTFSHYNLIGAFGLSVDRLSQLFLCVEATYCYNPSDPNSYHTHVHAADVTLTVAHFLSVEVISNSVRSTHGLALLMAAIMHDYRHPGVNNGYLVRDLDPLALTYNDASVLENFHAAEGFKMMLDQNFDIFKGWKPEDVKFFRHAYVKCILATDLALSLEYISKFQSLTNNMIYISSWIGSANGKEKGVGKVGGVGLESIQSQTLLLQMVLKVADVAHPCKPWDIHNKWSELVTAEFFKQGDQEIARGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVSIFSGYCNVSLPN 894
H FAAMS FSHYNLIGAFGLSVDRLSQLFLCVEATYC++P PNSYHTHVHAADVTLTV+HFLSV+ I+N+VRSTHGLALLMAAIMHDYRHPGVNNGYLVRDLDPLA+ YNDASVLENFHAAEGFKM+LD FDI KGWKPED++FFRHA+VKCILATDLALSLEY+SKFQSLT+ I+ +GS +G K GK G SIQ Q L+LQMVLKVADVAHPCKPW++H+KWSELVT EFFKQGD+E ARGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCV+IFS YC V+ N
Sbjct: 438 HSLWFAAMSAFSHYNLIGAFGLSVDRLSQLFLCVEATYCFSPEKPNSYHTHVHAADVTLTVSHFLSVDSIANTVRSTHGLALLMAAIMHDYRHPGVNNGYLVRDLDPLAVVYNDASVLENFHAAEGFKMVLDPTFDILKGWKPEDIQFFRHAFVKCILATDLALSLEYVSKFQSLTST---INVELGSGSGTAKPSGKPSGGENNSIQVQILVLQMVLKVADVAHPCKPWEVHHKWSELVTEEFFKQGDKEAARGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVTIFSMYCKVTTWN 732
BLAST of mRNA_M-pyrifera_M_contig6562.15949.1 vs. uniprot
Match: A0A835Z5P1_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P1_9STRA) HSP 1 Score: 339 bits (869), Expect = 1.110e-102 Identity = 167/296 (56.42%), Postives = 210/296 (70.95%), Query Frame = 1
Query: 1 HCFRFAAMSTFSHYNLIGAFGLSVDRLSQLFLCVEATYCYNPSDPNSYHTHVHAADVTLTVAHFLSVEVISNSVRSTHGLALLMAAIMHDYRHPGVNNGYLVRDLDPLALTYNDASVLENFHAAEGFKMMLDQNFDIFKGWKPEDVKFFRHAYVKCILATDLALSLEYISKFQSLTNNMIYISSWIGSANGKEKGVGKVGGVGLESIQSQTLLLQMVLKVADVAHPCKPWDIHNKWSELVTAEFFKQGDQEIARGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVSIFSGYCNVSL 888
H FA M F HYN GAF L ++++S L L VE TYC +P+ PN YHTH+HAADVTLTVAHF V+V+++ ++ T+ L+LL+AAIMHDYRHPGVNN YLV+ D L++TYND SVLENFHA+E F++++D ++I W EDV+ FR ++KCILATDLA S EY SKFQS + IS SAN SQ LLLQ++LKVADV+H KPWDIH +WS+++T EFFKQGD E +GL +SPLCDR NL KSQCDFIDFIVRPCV++FS +C +L
Sbjct: 1535 HSLWFAGMMVFLHYNFAGAFKLPLEKMSALLLHVERTYCMDPTKPNHYHTHLHAADVTLTVAHFCEVQVVTHQLQGTNALSLLLAAIMHDYRHPGVNNMYLVKRFDDLSVTYNDQSVLENFHASEAFRVLMDPKYNILTKWVVEDVRAFRVTFIKCILATDLAFSYEYTSKFQSA----VAISKSFESAN------------------SQILLLQVILKVADVSHATKPWDIHRRWSDMITEEFFKQGDLERGQGLQISPLCDRAQGNLAKSQCDFIDFIVRPCVTMFSDFCETTL 1808
BLAST of mRNA_M-pyrifera_M_contig6562.15949.1 vs. uniprot
Match: D8LTM6_ECTSI (Phosphodiesterase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM6_ECTSI) HSP 1 Score: 291 bits (744), Expect = 1.610e-90 Identity = 142/308 (46.10%), Postives = 194/308 (62.99%), Query Frame = 1
Query: 1 HCFRFAAMSTFSHYNLIGAFGLSVDRLSQLFLCVEATYCYNPSDPNSYHTHVHAADVTLTVAHFLSVEVISNSVRSTHGLALLMAAIMHDYRHPGVNNGYLVRDLDPLALTYNDASVLENFHAAEGFKMMLDQNFDIFKGWKPEDVKFFRHAYVKCILATDLALSLEYISKFQSLTNNM---------------IYISSWIGSANGKEKGVGKV-GGVGLESIQSQTLLLQMVLKVADVAHPCKPWDIHNKWSELVTAEFFKQGDQEIARGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVSIFSGYC 876
H + T HYN +G F ++ LS+ VE YCY+P+ PN YHT VHAADVTLTVAHF +I++ +++ G ALL++AI+HDYRH GVNNGYL++ D LA YND SVLENFH +E FK++ D+ +I G +D + FR +K ILATDLA EY+++F++ T + IG+ VG GG + +Q+Q LL+QMV+KVADV+HP KPWD+H +W+ L+T EF +QGD E +G+ VSPLC R N KSQCDF++F+VRPC ++FS +C
Sbjct: 295 HALWYTGTLTLYHYNFVGVFSVNPANLSRFLTHVEQNYCYDPAAPNPYHTSVHAADVTLTVAHFCENSIIASGIKALQGFALLVSAIVHDYRHRGVNNGYLIKVKDALATRYNDGSVLENFHISEAFKVLYDEETNILDGLSADDARHFRQLVIKIILATDLAHGFEYVARFKASTTSKGGRRASIVPDMGREGTSTPGLIGAPGSPGGMVGPPKGGATKDPLQAQILLMQMVIKVADVSHPMKPWDLHERWTRLITEEFHRQGDLEAEKGVPVSPLCSREGHNQAKSQCDFVNFVVRPCATVFSEFC 602
BLAST of mRNA_M-pyrifera_M_contig6562.15949.1 vs. uniprot
Match: A0A7S3XSI7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSI7_HETAK) HSP 1 Score: 268 bits (684), Expect = 7.170e-85 Identity = 140/293 (47.78%), Postives = 180/293 (61.43%), Query Frame = 1
Query: 1 HCFRFAAMSTFSHYNLIGAFGLSVDRLSQLFLCVEATYCYNPSDPNSYHTHVHAADVTLTVAHFLSVEVISNSVRSTHGLALLMAAIMHDYRHPGVNNGYLVRDLDPLALTYNDASVLENFHAAEGFKMMLDQNFDIFKGWKPEDVKFFRHAYVKCILATDLALSLEYISKFQSLTNNMIYISSWIGSANGKEKGVGKVGGVGLESIQSQTLLLQMVLKVADVAHPCKPWDIHNKWSELVTAEFFKQGDQEIARGLAVSPLCDRR-DQNLPKSQCDFIDFIVRPCVSIFSGYC 876
H F +M +YNL+GAF L +LS+L + E YCY+P PN YH H H ADV LTV H+ + V++ ++ THGLALL+AA HDYRHPG+NN LV PLALTYND SVLENFHAA+ F ++L + + FR +++ ILATDLA EY+SKF++L + +A+G G GG E + LL QM LK ADV HP KPW +H +WS L+ EF++QGD E RG+ +SPLCDR N KSQCDF+DF+VRPC+ FS C
Sbjct: 49 HSLWFVSMILLHYYNLVGAFALDARKLSRLLVRAERGYCYDPRRPNVYHNHRHGADVALTVFHYCNNPVMAQALDGTHGLALLLAAAFHDYRHPGLNNACLVAARAPLALTYNDQSVLENFHAAQAFALLLRPEHHCLENLGAAALGTFRKVFIELILATDLARGFEYVSKFKAL----------LAAADG-----GPGGGPDFEEPGRRLLLTQMALKCADVGHPAKPWALHARWSRLIAEEFWRQGDAERRRGVPISPLCDRHAGGNFAKSQCDFVDFVVRPCLVPFSKCC 326
BLAST of mRNA_M-pyrifera_M_contig6562.15949.1 vs. uniprot
Match: A0A7S1C4N6_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4N6_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.060e-65 Identity = 121/277 (43.68%), Postives = 161/277 (58.12%), Query Frame = 1
Query: 64 LSVDRLSQLFLCVEATYCYNPSDPNSYHTHVHAADVTLTVAHFLSVEVISNSVRSTHGLALLMAAIMHDYRHPGVNNGYLVRDLDPLALTYNDASVLENFHAAEGFKMMLDQNFDIFKGWKPEDVKFFRHAYVKCILATDLALSLEYISKFQSLTNNMIYISSWIGSANGKEKGVGKVGGVGLESIQSQTLLLQMVLKVADVAHPCKPWDIHNKWSELVTAEFFKQGDQEIARGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVSIFSGYCNVSLPN 894
+ VD L+ VEA YCY+P D N YHT+VHAADVT HFL+V + +SV + ALL+AA++HD+RHPGV++ +L+ L++ YND SVLENFHAAE F +M D+ E K R ++C+LATDLA Y + F++ T+ G G + LLLQM LK ADV HP +P +H KWS L++ EF QGD+E GL +SPLCDR + +L KSQ FI+F+VRPC FS +C V+ N
Sbjct: 633 VDVDVLTTYLQTVEAEYCYDPDDRNPYHTNVHAADVTQAAGHFLTVSKVEDSVGTDEAFALLLAAVVHDFRHPGVSSNFLIATHHELSVRYNDQSVLENFHAAEAFALMRRPGLDVLGRMDDEQKKHMRFTVIQCVLATDLAQGQRYYASFKARTS---------GDDFGSDD-------------NDMLLLLQMALKCADVGHPARPLPLHEKWSNLISREFHMQGDKERVLGLPISPLCDRDNFDLAKSQQGFIEFVVRPCFEPFSAFCGVTTWN 887
BLAST of mRNA_M-pyrifera_M_contig6562.15949.1 vs. uniprot
Match: A0A7S2WTV2_9STRA (Phosphodiesterase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTV2_9STRA) HSP 1 Score: 218 bits (556), Expect = 1.690e-61 Identity = 119/310 (38.39%), Postives = 173/310 (55.81%), Query Frame = 1
Query: 1 HCFRFAAMSTFSHYNLIGAFGLSVDRLSQLFLCVEATYCYNPSDPNSYHTHVHAADVTLTVAHFLSVEVISNSVRSTHGLALLMAAIMHDYRHPGVNNGYLVRDLDPLALTYNDASVLENFHAAEGFKMMLD-------------QNFDIFKGWKPEDVKFFRHAYVKCILATDLALSLEYISKFQSLTNNMIYISSWIGSANGKEKGVGKVGGVGLESIQSQTLLLQMVLKVADVAHPCKPWDIHNKWSELVTAEFFKQGDQEIARGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVSIFSGYCNVSLP 891
H A F+ Y L+ F + + L VE YC++P+ N YH HAADV TV+H + +S + + H +L +AAI+HDYRHPGVN +LV ++L YND S+LENFH +E F++ + DI + + E+ + FR + +LATDLA ++Y+S+F+ N ++ ++ S+N G G E + S LL+QM LK ADV+HP KPW H +W+EL++ EFF QGDQE +GL VS LCDR ++ PKSQ FI+F+V+PC + +C P
Sbjct: 441 HSLLVVATVLFNQYQLLQNFKVPAETFEAFILKVEEGYCFDPAVRNPYHNASHAADVLATVSHMVLAGPLSERLNAFHAFSLFVAAIVHDYRHPGVNQNFLVNSRSEISLKYNDKSILENFHISEAFRLFWQGSKPGVEEGGQPLPSTDITQYFSVEEQRRFRAYVIDMVLATDLAKGMDYLSRFK---NQLLRVADAGASSNSLTSG----GAPSQEVVVS--LLMQMTLKCADVSHPAKPWGTHIQWTELISQEFFLQGDQEKQQGLPVSMLCDRDKEDRPKSQIGFINFVVKPCFEVLVQFCRDHTP 741
BLAST of mRNA_M-pyrifera_M_contig6562.15949.1 vs. uniprot
Match: A0A482R7L7_9ARCH (3',5'-cyclic nucleotide phosphodiesterase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482R7L7_9ARCH) HSP 1 Score: 212 bits (540), Expect = 4.820e-59 Identity = 111/262 (42.37%), Postives = 151/262 (57.63%), Query Frame = 1
Query: 97 CVEATYCYNPSDPNSYHTHVHAADVTLTVAHFLSVEVISNSVRSTHGLALLMAAIMHDYRHPGVNNGYLVRDLDPLALTYNDASVLENFHAAEGFKMMLDQNFDIFKGWKPEDVKFFRHAYVKCILATDLALSLEYISKFQSLTNNMIYISSWIGSANGKEKGVGKVGGVGLESIQSQTLLLQMVLKVADVAHPCKPWDIHNKWSELVTAEFFKQGDQEIARGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVSIFSGYCNV 882
CVE YCY+PS N YHT+VHAADV + HFL V +SN + + A+L+A +HD+RHPG++N YL++ DP+A+ YND SVLENFHAAEGF +M +++ R +K ILATDL+ Y+S F + + V +G + + LL+QM++K +DV+H + W +H +WS LVT EF+ QGD E A GL VSPLC R NLP SQ FI F+VR + S +C V
Sbjct: 415 CVERNYCYHPSVRNPYHTNVHAADVVQALGHFLVVPRLSNILDCWNAFAILLAGALHDFRHPGLSNAYLMKTGDPIAIRYNDESVLENFHAAEGFLVMCQPKYNVLAHLDAARRTSMRQQMIKIILATDLSQGGRYVSAFTTRAS---------------------VADMGQDDAD-RLLLMQMMMKCSDVSHAAREWHVHEQWSWLVTEEFYLQGDAEAAAGLTVSPLCSRAAHNLPSSQLGFISFVVRGSFTALSDFCGV 654
BLAST of mRNA_M-pyrifera_M_contig6562.15949.1 vs. uniprot
Match: A0A7S1CCP6_9STRA (Phosphodiesterase n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CCP6_9STRA) HSP 1 Score: 200 bits (509), Expect = 1.700e-54 Identity = 108/287 (37.63%), Postives = 158/287 (55.05%), Query Frame = 1
Query: 13 FAAMSTFSHYNLIGAFGLSVDRLSQLFLCVEATYCYNPSDPNSYHTHVHAADVTLTVAHFLSVEVISNSVRSTHGLALLMAAIMHDYRHPGVNNGYLVRDLDPLALTYNDASVLENFHAAEGFKMMLDQNFDIFKGWKPEDVKFFRHAYVKCILATDLALSLEYISKFQSLTNNMIYISSWIGSANGKEKGVGKVGGVGLESIQSQTLLLQMVLKVADVAHPCKPWDIHNKWSELVTAEFFKQGDQEIARGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVSIFSGY 873
+ A F+ +L F + R +E TY Y+P PN YH +HAADV V FL + + L L+ +AI+HDYRHPGV+N +L+ +A+ YND SVLENFH+A F ++ F IF + + + R + C+L+TDLA + F+ + E G VG G+++ + ++ M +K ADV HP +P+ +H +WS+++TAEF+ QGD E RG+ +SPLCDRR+ NL KSQ FIDF+VRP ++FS Y
Sbjct: 467 YVAYELFNRMDLFAIFDIDSQRFFACMDRIENTYSYDPRSPNPYHDALHAADVAQAVTVFLQEPRVQTPLDDLDTLGLIFSAIVHDYRHPGVSNNFLIASKAVIAVRYNDDSVLENFHSASAFMLLAKPQFAIFNELEEDAWRRLRKIIIHCVLSTDLAKGGHILEAFKKDVVLPV------------ESGELSVGS-GMDT-DCRMAVMAMAIKCADVGHPARPFHVHLQWSKMITAEFYAQGDLERQRGMEISPLCDRRNHNLSKSQLGFIDFVVRPAFALFSRY 739
BLAST of mRNA_M-pyrifera_M_contig6562.15949.1 vs. uniprot
Match: A0A6U3TVK1_9STRA (Phosphodiesterase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3TVK1_9STRA) HSP 1 Score: 191 bits (486), Expect = 1.610e-53 Identity = 111/279 (39.78%), Postives = 151/279 (54.12%), Query Frame = 1
Query: 64 LSVDRLSQLFLCVEATYCYNPSDPNSYHTHVHAADVTLTVAHFLSVEVISNSVRSTHGLALLMAAIMHDYRHPGVNNGYLVRDLDPLALTYNDASVLENFHAAEGFKMML---DQNFDIFKGWKPEDVKFFRHAYVKCILATDLALSLEYISKF------QSLTNNMIYISSWIGSANGKEKGVGKVGGVGLESIQSQTLLLQMVLKVADVAHPCKPWDIHNKWSELVTAEFFKQGDQEIARGLAVSPLCDRRDQNLPKSQCDFIDFIVRPCVSIFSGY 873
+S RL VE YCY P PN YHT +HAADV +V + ++ V + S+ + L +AA++HD+RHPGVN G+L + LAL YND+SVLENFH +E F++M D NF + D FR ++ LATDLA + +S F +S I + + A +E + L+LQM LK AD++HP K W +H++WS L+ EFF QGD E GL VS LCDR++ + Q FIDF+VRPC S Y
Sbjct: 228 ISARRLYYFLHAVEQRYCYTPHAPNPYHTALHAADVFGSVVYIIN-HVCNESLATRDIFTLYIAALIHDFRHPGVNQGFLTKTSHELALLYNDSSVLENFHVSESFRLMRSSSDMNFLVTAS--EADRTHFRKVVIQLTLATDLAKHAQVLSAFTQKFLQKSAHETTEEIPNRVPCAEDEEGNI---------------LVLQMALKCADISHPTKKWSVHHRWSLLIVEEFFNQGDAEKLAGLPVSALCDRQNDQIHNMQIGFIDFVVRPCFSAVIAY 488
BLAST of mRNA_M-pyrifera_M_contig6562.15949.1 vs. uniprot
Match: A0A7S1C309_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C309_9STRA) HSP 1 Score: 183 bits (464), Expect = 7.710e-52 Identity = 103/263 (39.16%), Postives = 143/263 (54.37%), Query Frame = 1
Query: 61 GLSVDRLSQLFLCVEATYCYNPSDPNSYHTHVHAADVTLTVAHFLSVEVISNSVRSTHGLALLMAAIMHDYRHPGVNNGYLVRDLDPLALTYNDASVLENFHAAEGFKMMLDQNFDIFKGWKPEDVKFFRHAYVKCILATDLALSLEYISKFQSLTNNMIYISSWIGSANGKEKGVGKVGGVGLESIQSQTLLLQMVLKVADVAHPCKPWDIHNKWSELVTAEFFKQGDQEIARGLAVSPLCDRRDQNLPKSQCDFIDFIVRP 849
G + +S F V A Y NP YH H DV + + L + ++ + H LALL+AA +HD++HPGV+N +L A+T+ND SVLEN H +E F++M + D+F + + R ++ +LATDLALS +Y+S + T+ GLE + T ++ MVLK DV HP KP +H +W+ +T EFFKQGD+E GLAVSPLCDR D NLPK+Q FIDF+V P
Sbjct: 66 GARANVVSSYFTAVSAGYRDNP-----YHNRYHGTDVLQSCSVMLHQDKLARLLEPEHKLALLIAAAVHDFKHPGVSNKFLTTTGSDEAITWNDMSVLENMHVSEAFRLMRTEELDLFAFVERDTRLLLRKLIIELVLATDLALSFKYVSNMKHATDQ----------------------DPGLEKEDTATAVMCMVLKCCDVGHPSKPLPLHLQWTTRITEEFFKQGDRERELGLAVSPLCDRGDVNLPKAQLGFIDFVVLP 301 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig6562.15949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig6562.15949.1 >prot_M-pyrifera_M_contig6562.15949.1 ID=prot_M-pyrifera_M_contig6562.15949.1|Name=mRNA_M-pyrifera_M_contig6562.15949.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=291bp MSTFSHYNLIGAFGLSVDRLSQLFLCVEATYCYNPSDPNSYHTHVHAADVback to top mRNA from alignment at M-pyrifera_M_contig6562:6568..13726- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig6562.15949.1 ID=mRNA_M-pyrifera_M_contig6562.15949.1|Name=mRNA_M-pyrifera_M_contig6562.15949.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7159bp|location=Sequence derived from alignment at M-pyrifera_M_contig6562:6568..13726- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig6562:6568..13726- >mRNA_M-pyrifera_M_contig6562.15949.1 ID=mRNA_M-pyrifera_M_contig6562.15949.1|Name=mRNA_M-pyrifera_M_contig6562.15949.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1746bp|location=Sequence derived from alignment at M-pyrifera_M_contig6562:6568..13726- (Macrocystis pyrifera P11B4 male)back to top |